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Shanker Swaminathan, Ph.D. - Publications

Affiliations: 
2012 Medical and Molecular Genetics Indiana University, Bloomington, Bloomington, IN, United States 
Area:
Genetics, Neuroscience Biology, Cognitive Psychology
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37 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Retshabile G, Mlotshwa BC, Williams L, Mwesigwa S, Mboowa G, Huang Z, Rustagi N, Swaminathan S, Katagirya E, Kyobe S, Wayengera M, Kisitu GP, Kateete DP, Wampande EM, Maplanka K, et al. Whole-Exome Sequencing Reveals Uncaptured Variation and Distinct Ancestry in the Southern African Population of Botswana. American Journal of Human Genetics. PMID 29706352 DOI: 10.1016/J.Ajhg.2018.03.010  0.378
2016 Hanchard NA, Swaminathan S, Bucasas K, Furthner D, Fernbach S, Azamian MS, Wang X, Lewin M, Towbin JA, D'Alessandro LC, Morris SA, Dreyer W, Denfield S, Ayres NA, Franklin WJ, et al. A Genome Wide Association Study of Congenital Cardiovascular Left-Sided Lesions Shows Association with a Locus on Chromosome 20. Human Molecular Genetics. PMID 26965164 DOI: 10.1093/Hmg/Ddw071  0.405
2015 Nho K, Kim S, Risacher SL, Shen L, Corneveaux JJ, Swaminathan S, Lin H, Ramanan VK, Liu Y, Foroud TM, Inlow MH, Siniard AL, Reiman RA, Aisen PS, Petersen RC, et al. Protective variant for hippocampal atrophy identified by whole exome sequencing. Annals of Neurology. 77: 547-52. PMID 25559091 DOI: 10.1002/Ana.24349  0.691
2014 Shen L, Thompson PM, Potkin SG, Bertram L, Farrer LA, Foroud TM, Green RC, Hu X, Huentelman MJ, Kim S, Kauwe JS, Li Q, Liu E, Macciardi F, Moore JH, ... ... Swaminathan S, et al. Genetic analysis of quantitative phenotypes in AD and MCI: imaging, cognition and biomarkers. Brain Imaging and Behavior. 8: 183-207. PMID 24092460 DOI: 10.1007/S11682-013-9262-Z  0.721
2014 Swaminathan S, Risacher SL, Yoder KK, West JD, Shen L, Kim S, Inlow M, Foroud T, Jagust WJ, Koeppe RA, Mathis CA, Shaw LM, Trojanowski JQ, Soares H, Aisen PS, et al. Association of plasma and cortical amyloid beta is modulated by APOE ε4 status. Alzheimer's & Dementia : the Journal of the Alzheimer's Association. 10: e9-e18. PMID 23541187 DOI: 10.1016/J.Jalz.2013.01.007  0.481
2014 Ramanan VK, Risacher SL, Nho K, Kim S, Swaminathan S, Shen L, Foroud TM, Hakonarson H, Huentelman MJ, Aisen PS, Petersen RC, Green RC, Jack CR, Koeppe RA, Jagust WJ, et al. APOE and BCHE as modulators of cerebral amyloid deposition: a florbetapir PET genome-wide association study. Molecular Psychiatry. 19: 351-7. PMID 23419831 DOI: 10.1038/Mp.2013.19  0.72
2014 Ramanan VK, Nho K, Risacher SL, Kim S, Shen L, Swaminathan S, Foroud TM, Aisen P, Hakonarson H, Huentelman M, Jack C, Jagust W, Petersen RC, Potkin S, Shaw L, et al. P3-024: NEXT-GENERATION SEQUENCING OF THE BCHE LOCUS IDENTIFIES A FUNCTIONAL SNP ASSOCIATED WITH ALZHEIMER'S DISEASE BIOMARKERS AND AGE OF ONSET Alzheimer's & Dementia. 10: P636-P636. DOI: 10.1016/J.Jalz.2014.05.1111  0.726
2013 Kim S, Nho K, Risacher SL, Inlow M, Swaminathan S, Yoder KK, Shen L, West JD, McDonald BC, Tallman EF, Hutchins GD, Fletcher JW, Farlow MR, Ghetti B, Saykin AJ. PARP1 gene variation and microglial activity on [(11)C]PBR28 PET in older adults at risk for Alzheimer's disease. Multimodal Brain Image Analysis : Third International Workshop, Mbia 2013, Held in Conjunction With Miccai 2013, Nagoya, Japan, September 22, 2013 : Proceedings / Li Shen, Tianming Liu, Pew-Thian Yap, Heng Huang, Dinggang Shen, Carl-Fre.... 8159: 150-158. PMID 25383391 DOI: 10.1007/978-3-319-02126-3_15  0.514
2013 Kim S, Swaminathan S, Inlow M, Risacher SL, Nho K, Shen L, Foroud TM, Petersen RC, Aisen PS, Soares H, Toledo JB, Shaw LM, Trojanowski JQ, Weiner MW, McDonald BC, et al. Influence of genetic variation on plasma protein levels in older adults using a multi-analyte panel. Plos One. 8: e70269. PMID 23894628 DOI: 10.1371/Journal.Pone.0070269  0.557
2013 Nho K, Corneveaux JJ, Kim S, Lin H, Risacher SL, Shen L, Swaminathan S, Ramanan VK, Liu Y, Foroud T, Inlow MH, Siniard AL, Reiman RA, Aisen PS, Petersen RC, et al. Identification of functional variants from whole-exome sequencing, combined with neuroimaging genetics. Molecular Psychiatry. 18: 739. PMID 23787478 DOI: 10.1038/Mp.2013.81  0.666
2013 Nho K, Corneveaux JJ, Kim S, Lin H, Risacher SL, Shen L, Swaminathan S, Ramanan VK, Liu Y, Foroud T, Inlow MH, Siniard AL, Reiman RA, Aisen PS, Petersen RC, et al. Whole-exome sequencing and imaging genetics identify functional variants for rate of change in hippocampal volume in mild cognitive impairment. Molecular Psychiatry. 18: 781-7. PMID 23608917 DOI: 10.1038/Mp.2013.24  0.715
2013 Thambisetty M, An Y, Nalls M, Sojkova J, Swaminathan S, Zhou Y, Singleton AB, Wong DF, Ferrucci L, Saykin AJ, Resnick SM. Effect of complement CR1 on brain amyloid burden during aging and its modification by APOE genotype. Biological Psychiatry. 73: 422-8. PMID 23022416 DOI: 10.1016/J.Biopsych.2012.08.015  0.54
2013 Kim S, Nho K, Risacher S, Swaminathan S, Yoder K, Shen L, West J, McDonald B, Tallman E, Hutchins G, Fletcher J, Farlow M, Ghetti B, Saykin A. P4-006: Influence of PARP1 haplotype on [11C]PBR28 PET brain uptake Alzheimer's & Dementia. 9: P706-P707. DOI: 10.1016/J.Jalz.2013.05.1394  0.398
2013 Swaminathan S, Nho K, Risacher S, Yoder K, Kim S, Shen L, Tallman E, McDonald B, Hutchins G, Fletcher J, Farlow M, Ghetti B, Foroud T, Saykin A. IC-P-137: Gene-based analyses of microglial activation on [11C] PBR28 PET in older adults at risk for Alzheimer's disease Alzheimer's & Dementia. 9: P81-P81. DOI: 10.1016/J.Jalz.2013.05.134  0.457
2013 Nho K, Swaminathan S, Kim S, Risacher S, Ramanan V, Shen L, Mackin S, Aisen P, Petersen R, Weiner M, McDonald B, Farlow M, Ghetti B, Gao S, Saykin A, et al. Genome-wide analysis of genetic variants associated with depressive symptoms in older adults Alzheimers & Dementia. 9. DOI: 10.1016/J.Jalz.2013.05.1077  0.65
2013 Nho K, Corneveaux J, Kim S, Lin H, Risacher S, Shen L, Swaminathan S, Ramanan V, Liu Y, Foroud T, Inlow M, Reiman R, Aisen P, Petersen R, Green R, et al. O3-01-03: Protective variant for rate of hippocampal volume loss identified by whole exome sequencing in APOE-ε3ε3 males with MCI Alzheimer's & Dementia. 9: P517-P518. DOI: 10.1016/J.Jalz.2013.04.238  0.654
2012 Swaminathan S, Huentelman MJ, Corneveaux JJ, Myers AJ, Faber KM, Foroud T, Mayeux R, Shen L, Kim S, Turk M, Hardy J, Reiman EM, Saykin AJ. Analysis of copy number variation in Alzheimer's disease in a cohort of clinically characterized and neuropathologically verified individuals. Plos One. 7: e50640. PMID 23227193 DOI: 10.1371/Journal.Pone.0050640  0.592
2012 Swaminathan S, Shen L, Kim S, Inlow M, West JD, Faber KM, Foroud T, Mayeux R, Saykin AJ. Analysis of copy number variation in Alzheimer's disease: the NIALOAD/ NCRAD Family Study. Current Alzheimer Research. 9: 801-14. PMID 22486522 DOI: 10.2174/156720512802455331  0.514
2012 Swaminathan S, Shen L, Risacher SL, Yoder KK, West JD, Kim S, Nho K, Foroud T, Inlow M, Potkin SG, Huentelman MJ, Craig DW, Jagust WJ, Koeppe RA, Mathis CA, et al. Amyloid pathway-based candidate gene analysis of [(11)C]PiB-PET in the Alzheimer's Disease Neuroimaging Initiative (ADNI) cohort. Brain Imaging and Behavior. 6: 1-15. PMID 21901424 DOI: 10.1007/S11682-011-9136-1  0.575
2012 Saykin A, Shen L, Risacher S, Swaminathan S, Kim S, Ngo K, Thompson P, Potkin S, Farrer L. F2-02-03: Structural, functional and molecular imaging as intermediate phenotypes for studies of candidate genes, pathways and GWAS in Alzheimer's disease Alzheimer's & Dementia. 8: P232-P232. DOI: 10.1016/J.Jalz.2012.05.614  0.489
2012 Kim S, Swaminathan S, Ngo K, Risacher S, Shen L, Foroud T, Shaw L, Trojanowski J, Weiner M, Saykin A. Pairwise gene-protein association analysis on cerebrospinal fluid proteomics in the ADNI-1 cohort Alzheimers & Dementia. 8. DOI: 10.1016/J.Jalz.2012.05.1841  0.467
2012 Kim S, Swaminathan S, Ngo K, Risacher S, Shen L, Foroud T, Shaw L, Trojanowski J, Soares H, Weiner M, Saykin A, Initiative ADN. Relationship between CSF and plasma proteomic data in the ADNI-1 cohort Alzheimers & Dementia. 8. DOI: 10.1016/J.Jalz.2012.05.178  0.42
2012 Li T, Yan J, Kim S, Swaminathan S, Risacher S, Shaw L, Trojanowski J, Aisen P, Petersen R, Weiner M, Saykin A, Shen L. O4-01-01: Classification of MCI and Alzheimer's disease from CSF biomarkers: An ADNI study of Aß, tau and P-tau versus 83 proteomic analytes Alzheimer's & Dementia. 8: P609-P610. DOI: 10.1016/J.Jalz.2012.05.1634  0.483
2012 Kim S, Swaminathan S, Ngo K, Risacher S, Shen L, Foroud T, Shaw L, Trojanowski J, Weiner M, Saykin A. Pairwise gene-protein association analysis on CSF proteomics in the ADNI-1 cohort Alzheimers & Dementia. 8. DOI: 10.1016/J.Jalz.2012.05.102  0.482
2012 Swaminathan S, Huentelman M, Corneveaux J, Myers A, Faber K, Foroud T, Mayeux R, Shen L, Kim S, Turk M, Hardy J, Reiman E, Saykin A. Replication and meta-analysis of the CHRFAM7A copy number variant in a cohort of clinically characterized and neuropathologically verified individuals Alzheimers & Dementia. 8: 678. DOI: 10.1016/J.Jalz.2012.05.101  0.476
2011 Shen L, Kim S, Qi Y, Inlow M, Swaminathan S, Nho K, Wan J, Risacher SL, Shaw LM, Trojanowski JQ, Weiner MW, Saykin AJ. Identifying Neuroimaging and Proteomic Biomarkers for MCI and AD via the Elastic Net. Multimodal Brain Image Analysis : First International Workshop, Mbia 2011, Held in Conjunction With Miccai 2011, Toronto, Canada, September 18, 2011 : Proceedings / Tianming Liu ... [Et Al.], (Eds.). 7012: 27-34. PMID 27054198 DOI: 10.1007/978-3-642-24446-9_4  0.441
2011 Nho K, Shen L, Kim S, Swaminathan S, Risacher SL, Saykin AJ. The effect of reference panels and software tools on genotype imputation. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 2011: 1013-8. PMID 22195161  0.431
2011 Wan J, Kim S, Inlow M, Nho K, Swaminathan S, Risacheri SL, Fang S, Weiner MW, Beg MF, Wang L, Saykin AJ, Shen L. Hippocampal surface mapping of genetic risk factors in AD via sparse learning models. Medical Image Computing and Computer-Assisted Intervention : Miccai ... International Conference On Medical Image Computing and Computer-Assisted Intervention. 14: 376-83. PMID 21995051 DOI: 10.1007/978-3-642-23629-7_46  0.468
2011 Swaminathan S, Kim S, Shen L, Risacher SL, Foroud T, Pankratz N, Potkin SG, Huentelman MJ, Craig DW, Weiner MW, Saykin AJ, The Alzheimer's Disease Neuroimaging Initiative Adni. Genomic Copy Number Analysis in Alzheimer's Disease and Mild Cognitive Impairment: An ADNI Study. International Journal of Alzheimer's Disease. 2011: 729478. PMID 21660214 DOI: 10.4061/2011/729478  0.576
2011 Kim S, Swaminathan S, Shen L, Risacher SL, Nho K, Foroud T, Shaw LM, Trojanowski JQ, Potkin SG, Huentelman MJ, Craig DW, DeChairo BM, Aisen PS, Petersen RC, Weiner MW, et al. Genome-wide association study of CSF biomarkers Abeta1-42, t-tau, and p-tau181p in the ADNI cohort. Neurology. 76: 69-79. PMID 21123754 DOI: 10.1212/Wnl.0B013E318204A397  0.576
2011 Saykin A, Swaminathan S, Risacher S, Yoder K, West J, Shen L, Kim S, Inlow M, Foroud T, Jagust W, Koeppe R, Mathis C. P4-363: APOE e4 status modulates the association of plasma and cortical Aβ: Relation of plasma Aβ and [11C]PiB PET in the ADNI cohort Alzheimer's & Dementia. 7: e39-e39. DOI: 10.1016/J.Jalz.2011.09.177  0.464
2011 Kim S, Swaminathan S, Inlow M, Risacher S, Shen L, Foroud T, Shaw L, Trojanowski J, Soares H, Weiner M, Saykin A. Influence of genetic variation on plasma proteomics in AD, MCI and controls: Pairwise gene-protein analysis in the ADNI-1 cohort Alzheimers & Dementia. 7. DOI: 10.1016/J.Jalz.2011.09.084  0.539
2010 Saykin AJ, Shen L, Foroud TM, Potkin SG, Swaminathan S, Kim S, Risacher SL, Nho K, Huentelman MJ, Craig DW, Thompson PM, Stein JL, Moore JH, Farrer LA, Green RC, et al. Alzheimer's Disease Neuroimaging Initiative biomarkers as quantitative phenotypes: Genetics core aims, progress, and plans. Alzheimer's & Dementia : the Journal of the Alzheimer's Association. 6: 265-73. PMID 20451875 DOI: 10.1016/J.Jalz.2010.03.013  0.567
2010 Shen L, Kim S, Risacher SL, Nho K, Swaminathan S, West JD, Foroud T, Pankratz N, Moore JH, Sloan CD, Huentelman MJ, Craig DW, Dechairo BM, Potkin SG, Jack CR, et al. Whole genome association study of brain-wide imaging phenotypes for identifying quantitative trait loci in MCI and AD: A study of the ADNI cohort. Neuroimage. 53: 1051-63. PMID 20100581 DOI: 10.1016/J.Neuroimage.2010.01.042  0.559
2010 Shen L, Wang J, Kim S, McCullough K, Nho K, Swaminathan S, West JD, Fang S, McHugh T, Flashman LA, Wishart HA, Rabin LA, Rhodes CH, Guerin SJ, Moore JH, et al. O3-06-01: Association analysis of candidate SNPs on hippocampal volume and shape in mild cognitive impairment and older adults with cognitive complaints Alzheimer's & Dementia. 6: S137-S138. DOI: 10.1016/J.Jalz.2010.05.427  0.454
2010 Kim S, Swaminathan S, Shen L, Risacher SL, Nho K, Foroud T, Shaw LM, Trojanowski JQ, Potkin SG, Huentelman MJ, Craig DW, DeChairo BM, Weiner MW, Saykin AJ. Genome-wide association study of CSF biomarkers amyloid beta 1-42, tau and tau phosphorylated at threonine 181 in the ADNI cohort Alzheimers & Dementia. 6. DOI: 10.1016/J.Jalz.2010.05.404  0.473
2010 Swaminathan S, Kim S, Shen L, Risacher SL, Foroud T, Pankratz N, Potkin SG, Huentelman MJ, Craig DW, Weiner MW, Saykin AJ. Preliminary analysis of copy number variation in the ADNI cohort Alzheimers & Dementia. 6. DOI: 10.1016/J.Jalz.2010.05.050  0.463
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