Stephen Cooper - Publications

Affiliations: 
University of Michigan, Ann Arbor, Ann Arbor, MI 
Area:
regulation of eukaryotic cell growth and division
Website:
http://www.med.umich.edu/microbio/bio/cooper.htm

73 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Cooper S. The Synchronization Manifesto: A critique of whole-culture synchronization. The Febs Journal. PMID 31446671 DOI: 10.1111/Febs.15050  0.376
2017 Cooper S. Rethinking cell-cycle-dependent gene expression in Schizosaccharomyces pombe. Antonie Van Leeuwenhoek. PMID 28639147 DOI: 10.1007/S10482-017-0902-Y  0.367
2013 Cooper S. Schizosaccharomyces pombe grows exponentially during the division cycle with no rate change points. Fems Yeast Research. 13: 650-8. PMID 23981297 DOI: 10.1111/1567-1364.12072  0.378
2012 Cooper S. On a heuristic point of view concerning the expression of numerous genes during the cell cycle. Iubmb Life. 64: 10-7. PMID 22095856 DOI: 10.1002/Iub.571  0.4
2009 Cooper S, Shedden K, Vu-Phan D. Invariant mRNA and mitotic protein breakdown solves the Russian Doll problem of the cell cycle. Cell Biology International. 33: 10-8. PMID 18996490 DOI: 10.1016/J.Cellbi.2008.10.004  0.411
2009 Cooper S, Gonzalez-Hernandez M. Experimental reconsideration of the utility of serum starvation as a method for synchronizing mammalian cells. Cell Biology International. 33: 71-7. PMID 18948216 DOI: 10.1016/J.Cellbi.2008.09.009  0.37
2008 Cooper S. On the fiftieth anniversary of the Schaechter, Maaløe, Kjeldgaard experiments: implications for cell-cycle and cell-growth control. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 30: 1019-24. PMID 18800382 DOI: 10.1002/Bies.20814  0.377
2007 Cooper S, Chen KZ, Ravi S. Thymidine block does not synchronize L1210 mouse leukaemic cells: implications for cell cycle control, cell cycle analysis and whole-culture synchronization Cell Proliferation. 41: 156-167. PMID 18211291 DOI: 10.1111/J.1365-2184.2007.00508.X  0.409
2007 Cooper S, Shedden K. Microarrays and the relationship of mRNA variation to protein variation during the cell cycle. Journal of Theoretical Biology. 249: 574-81. PMID 17915257 DOI: 10.1016/J.Jtbi.2007.08.019  0.36
2007 Cooper S, Paulsen M, Ljungman M, Vu-Phan D, Kim D, Gonzalez-Hernandez M. Membrane-elution analysis of content of cyclins A, B1, and E during the unperturbed mammalian cell cycle. Cell Division. 2: 28. PMID 17892542 DOI: 10.1186/1747-1028-2-28  0.409
2007 Cooper S, Shedden K, Vu-Phan D. Invariant mRNA content and mitotic protein breakdown as a solution to the Russian Doll problem of the mammalian cell cycle Nature Precedings. 2: 1-1. DOI: 10.1038/Npre.2007.1218.1  0.411
2006 Cooper S. Regulation of DNA synthesis in bacteria: Analysis of the Bates/Kleckner licensing/initiation-mass model for cell cycle control. Molecular Microbiology. 62: 303-7. PMID 17020574 DOI: 10.1111/J.1365-2958.2006.05342.X  0.402
2006 Cooper S. Checkpoints and restriction points in bacteria and eukaryotic cells. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 28: 1035-9. PMID 16998839 DOI: 10.1002/Bies.20475  0.41
2006 Cooper S. Distinguishing between linear and exponential cell growth during the division cycle: single-cell studies, cell-culture studies, and the object of cell-cycle research. Theoretical Biology & Medical Modelling. 3: 10. PMID 16504098 DOI: 10.1186/1742-4682-3-10  0.42
2006 Cooper S, Iyer G, Tarquini M, Bissett P. Nocodazole does not synchronize cells: implications for cell-cycle control and whole-culture synchronization. Cell and Tissue Research. 324: 237-42. PMID 16432713 DOI: 10.1007/S00441-005-0118-8  0.443
2006 Cooper S. Bacterial Growth and Division Reviews in Cell Biology and Molecular Medicine. DOI: 10.1002/3527600906.Mcb.200300079  0.479
2005 Cooper S. Comment on and reply to "Analysis of variation of amplitudes in cell cycle gene expression" by Liu, Gaido and Wolfinger: on the analysis of gene expression during the normal, eukaryotic, cell cycle. Theoretical Biology & Medical Modelling. 2: 47. PMID 16297235 DOI: 10.1186/1742-4682-2-47  0.338
2005 Cooper S. Reanalysis of the protocol for in vitro synchronization of mammalian astrocytic cultures by serum deprivation. Brain Research. Brain Research Protocols. 15: 115-8. PMID 15979934 DOI: 10.1016/J.Brainresprot.2005.05.002  0.383
2004 Cooper S. Control and maintenance of mammalian cell size. Bmc Cell Biology. 5: 35. PMID 15456512 DOI: 10.1186/1471-2121-5-35  0.395
2004 Cooper S. A unifying model for the G1 period in prokaryotes and eukaryotes. Nature. 280: 17-9. PMID 15305577 DOI: 10.1038/280017A0  0.352
2004 Cooper S. Rejoinder: whole-culture synchronization cannot, and does not, synchronize cells. Trends in Biotechnology. 22: 274-6. PMID 15158054 DOI: 10.1016/J.Tibtech.2004.04.011  0.359
2003 Cooper S, Shedden K. Microarray analysis of gene expression during the cell cycle. Cell & Chromosome. 2: 1. PMID 14577836 DOI: 10.1186/1475-9268-2-1  0.396
2003 Cooper S. How the change from FLM to FACS affected our understanding of the G1-phase of the cell cycle. Cell Cycle (Georgetown, Tex.). 2: 157-9. PMID 12695668 DOI: 10.4161/Cc.2.2.302  0.369
2003 Cooper S. Reappraisal of serum starvation, the restriction point, G0, and G1 phase arrest points. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 17: 333-40. PMID 12631573 DOI: 10.1096/Fj.02-0352Rev  0.369
2002 Cooper S. Reappraisal of G1-phase arrest and synchronization by lovastatin. Cell Biology International. 26: 715-27. PMID 12175675 DOI: 10.1006/Cbir.2002.0925  0.406
2002 Shedden K, Cooper S. Analysis of cell-cycle gene expression in Saccharomyces cerevisiae using microarrays and multiple synchronization methods. Nucleic Acids Research. 30: 2920-9. PMID 12087178 DOI: 10.1093/Nar/Gkf414  0.35
2002 Cooper S. Cell cycle analysis and microarrays. Trends in Genetics : Tig. 18: 289-90. PMID 12044356 DOI: 10.1016/S0168-9525(02)02694-X  0.371
2002 Cooper S. The Schaechter-Bentzon-Maaløe experiment and the analysis of cell cycle events in eukaryotic cells. Trends in Microbiology. 10: 169-73. PMID 11912022 DOI: 10.1016/S0966-842X(02)02322-3  0.44
2002 Shedden K, Cooper S. Analysis of cell-cycle-specific gene expression in human cells as determined by microarrays and double-thymidine block synchronization. Proceedings of the National Academy of Sciences of the United States of America. 99: 4379-84. PMID 11904377 DOI: 10.1073/Pnas.062569899  0.342
2001 Cooper S. Helical growth and the curved shape of Vibrio cholerae. Fems Microbiology Letters. 198: 123-124. PMID 11430401 DOI: 10.1111/J.1574-6968.2001.Tb10629.X  0.324
2001 Cooper S. Revisiting the relationship of the mammalian G1 phase to cell differentiation. Journal of Theoretical Biology. 208: 399-402. PMID 11222045 DOI: 10.1006/Jtbi.2000.2228  0.312
2000 Cooper S. The continuum model and G1-control of the mammalian cell cycle. Progress in Cell Cycle Research. 4: 27-39. PMID 10740812 DOI: 10.1007/978-1-4615-4253-7_3  0.369
1999 Cooper S, Yu C, Shayman JA. Phosphorylation‐Dephosphorylation of Retinoblastoma Protein Not Necessary for Passage through the Mammalian Cell Division Cycle Iubmb Life. 48: 225-230. PMID 10794602 DOI: 10.1080/713803488  0.422
1998 Cooper S, Keasling JD. Cycle-specific replication of chromosomal and F-plasmid origins. Fems Microbiology Letters. 163: 217-22. PMID 9673025 DOI: 10.1111/J.1574-6968.1998.Tb13048.X  0.541
1998 Cooper S. Mammalian cells are not synchronized in G1‐phase by starvation or inhibition: considerations of the fundamental concept of G1‐phase synchronization Cell Proliferation. 31: 9-16. PMID 9666815 DOI: 10.1046/J.1365-2184.1998.00110.X  0.423
1998 Cooper S. On the proposal of a G0 phase and the restriction point The Faseb Journal. 12: 367-373. PMID 9506481 DOI: 10.1096/Fasebj.12.3.367  0.353
1998 Cooper S. On the Interpretation of the Shortening of the G1-Phase by Overexpression of Cyclins in Mammalian Cells Experimental Cell Research. 238: 110-115. PMID 9457062 DOI: 10.1006/Excr.1997.3807  0.335
1997 Cooper S. G1 and S Phase Gene Expression Cannnot Be Analyzed in Mammalian Cells Synchronized by Inhibition Microbial & Comparative Genomics. 2: 269-273. PMID 9689225 DOI: 10.1089/Omi.1.1997.2.269  0.365
1997 Cooper S. Division pattern of a round mutant of Escherichia coli. Journal of Bacteriology. 179: 5582-5584. PMID 9287016 DOI: 10.1128/Jb.179.17.5582-5584.1997  0.316
1997 Cooper S, Denny MW. A conjecture on the relationship of bacterial shape to motility in rod-shaped bacteria Fems Microbiology Letters. 148: 227-231. DOI: 10.1111/J.1574-6968.1997.Tb10293.X  0.303
1994 Hupp TR, Keasling JD, Cooper S, Kaguni JM. Synthesis of DnaK protein during the division cycle of Escherichia coli. Research in Microbiology. 145: 99-109. PMID 8090998 DOI: 10.1016/0923-2508(94)90003-5  0.549
1993 Gally D, Bray K, Cooper S. Synthesis of peptidoglycan and membrane during the division cycle of rod-shaped, gram-negative bacteria. Journal of Bacteriology. 175: 3121-3130. PMID 8491728 DOI: 10.1128/Jb.175.10.3121-3130.1993  0.403
1993 Gally D, Cooper S. Peptidoglycan synthesis in Salmonella typhimurium 2616. Microbiology. 139: 1469-1476. PMID 8371110 DOI: 10.1099/00221287-139-7-1469  0.412
1992 Keasling JD, Palsson BO, Cooper S. Replication of the R6K plasmid during the Escherichia coli cell cycle. Journal of Bacteriology. 174: 1060-2. PMID 1732198 DOI: 10.1128/Jb.174.3.1060-1062.1992  0.62
1992 Keasling JD, Palsson BO, Cooper S. Replication of prophage P1 is cell-cycle specific. Journal of Bacteriology. 174: 4457-62. PMID 1624438 DOI: 10.1128/Jb.174.13.4457-4462.1992  0.645
1992 Keasling JD, Palsson BO, Cooper S. Replication of mini-F plasmids during the bacterial division cycle. Research in Microbiology. 143: 541-8. PMID 1475515 DOI: 10.1016/0923-2508(92)90111-Z  0.61
1991 Keasling JD, Palsson BO, Cooper S. Cell-cycle-specific F plasmid replication: regulation by cell size control of initiation. Journal of Bacteriology. 173: 2673-80. PMID 2013579 DOI: 10.1128/Jb.173.8.2673-2680.1991  0.643
1991 Cooper S. Synthesis of the cell surface during the division cycle of rod-shaped, gram-negative bacteria. Microbiological Research. 55: 649-674. DOI: 10.1128/Mmbr.55.4.649-674.1991  0.409
1990 Cooper S. An alternative view of the Caulobacter crescentus division cycle pattern with application to cell differentiation and cell-cycle-specific synthesis Proceedings of the Royal Society B: Biological Sciences. 242: 197-200. DOI: 10.1098/Rspb.1990.0124  0.451
1989 Okuda A, Cooper S. The continuum model: an experimental and theoretical challenge to the G1 model of cell cycle regulation. Experimental Cell Research. 185: 1-7. PMID 2680535 DOI: 10.1016/0014-4827(89)90031-1  0.317
1989 Cooper S. The constrained hoop: an explanation of the overshoot in cell length during a shift-up of Escherichia coli. Journal of Bacteriology. 171: 5239-5243. PMID 2676969 DOI: 10.1128/Jb.171.10.5239-5243.1989  0.383
1988 Cooper S. Rate and topography of cell wall synthesis during the division cycle of Salmonella typhimurium. Journal of Bacteriology. 170: 422-430. PMID 3275624 DOI: 10.1128/Jb.170.1.422-430.1988  0.419
1988 Cooper S. The continuum model and c-myc synthesis during the division cycle Journal of Theoretical Biology. 135: 393-400. PMID 3256727 DOI: 10.1016/S0022-5193(88)80253-4  0.309
1988 Cooper S, Hsieh ML. The rate and topography of cell wall synthesis during the division cycle of Escherichia coli using N-acetylglucosamine as a peptidoglycan label. Journal of General Microbiology. 134: 1717-21. PMID 3065454 DOI: 10.1099/00221287-134-6-1717  0.41
1988 Cooper S. What is the bacterial growth law during the division cycle Journal of Bacteriology. 170: 5001-5005. PMID 3053639 DOI: 10.1128/Jb.170.11.5001-5005.1988  0.331
1987 Cooper S. Cell cycle controls in eukaryotic cells: a reply. Journal of Theoretical Biology. 127: 247-249. PMID 3695548 DOI: 10.1016/S0022-5193(87)80134-0  0.403
1987 Cooper S, Fantes P. On G0 and cell cycle controls Bioessays. 7: 220-223. PMID 3325051 DOI: 10.1002/Bies.950070507  0.347
1986 Cooper S, Metzger N. Efficient and quantitative incorporation of diaminopimelic acid into the peptidoglycan of Salmonella typhimurium Fems Microbiology Letters. 36: 191-194. DOI: 10.1111/J.1574-6968.1986.Tb01694.X  0.311
1982 Cooper S. The Continuum Model: Statistical implications Journal of Theoretical Biology. 94: 783-800. PMID 7078225 DOI: 10.1016/0022-5193(82)90078-9  0.41
1981 Cooper S. The central dogma of cell biology Cell Biology International Reports. 5: 539-549. PMID 7018703 DOI: 10.1016/S0309-1651(81)80002-1  0.444
1974 Cooper S. A criterion for using chloramphenicol to define different processes in the initiation of DNA synthesis in bacteria. Journal of Theoretical Biology. 46: 117-127. PMID 4604000 DOI: 10.1016/0022-5193(74)90143-X  0.343
1973 Cooper S, Ruettinger T. Replication of deoxyribonucleic acid during the division cycle of Salmonella typhimurium. Journal of Bacteriology. 114: 966-973. PMID 4576412 DOI: 10.1128/Jb.114.3.966-973.1973  0.397
1972 Cooper S. Relationship of Flac replication and chromosome replication. Proceedings of the National Academy of Sciences of the United States of America. 69: 2706-2710. PMID 4560697 DOI: 10.1073/Pnas.69.9.2706  0.411
1971 Margolis SG, Cooper S. Simulation of bacterial growth, cell division, and DNA synthesis. Computers and Biomedical Research. 4: 427-443. PMID 5125352 DOI: 10.1016/0010-4809(71)90026-7  0.349
1971 Cooper S, Weusthoff G. Comment on the Use of Chloramphenicol to Study the Initiation of Deoxyribonucleic Acid Synthesis Journal of Bacteriology. 106: 709-711. PMID 4929877 DOI: 10.1128/Jb.106.2.709-711.1971  0.308
1969 Cooper S. Cell division and DNA replication following a shift to a richer medium. Journal of Molecular Biology. 43: 1-11. PMID 4897790 DOI: 10.1016/0022-2836(69)90074-6  0.375
1968 Cooper S, Helmstetter CE. Chromosome replication and the division cycle of Escherichia coli B/r. Journal of Molecular Biology. 31: 519-40. PMID 4866337 DOI: 10.1016/0022-2836(68)90425-7  0.377
1964 LODISH HF, COOPER S, ZINDER ND. HOST-DEPENDENT MUTANTS OF THE BACTERIOPHAGE F2. IV. ON THE BIOSYNTHESIS OF A VIRAL RNA POLYMERASE. Virology. 24: 60-70. PMID 14208903 DOI: 10.1016/0042-6822(64)90148-5  0.639
1964 ZINDER ND, COOPER S. HOST-DEPENDENT MUTANTS OF THE BACTERIOPHAGE F2. I. ISOLATION AND PRELIMINARY CLASSIFICATION. Virology. 23: 152-8. PMID 14187902 DOI: 10.1016/0042-6822(64)90277-6  0.556
1964 Zinder ND, Cooper S. Host-dependent mutants of the bacteriophage f2 I. Isolation and preliminary classification Virology. 23: 152-158.  0.511
1963 COOPER S, ZINDER ND. THE GROWTH OF AN RNA BACTERIOPHAGE: THE ROLE OF PROTEIN SYNTHESIS. Virology. 20: 605-12. PMID 14059827 DOI: 10.1016/0042-6822(63)90285-X  0.577
1963 August JT, Cooper S, Shapiro L, Zinder ND. RNA Phage Induced RNA Polymerase Cold Spring Harbor Symposia On Quantitative Biology. 28: 95-97. DOI: 10.1101/Sqb.1963.028.01.019  0.527
1962 COOPER S, ZINDER ND. The growth of an RNA bacteriophage: the role of DNA synthesis. Virology. 18: 405-11. PMID 14022862 DOI: 10.1016/0042-6822(62)90031-4  0.597
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