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Marcelo B. Soares - Publications

Affiliations: 
University of Iowa, Iowa City, IA 
Area:
Genetics, Molecular Biology, Obstetrics and Gynecology
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Year Citation  Score
2019 Lewis R, Li YD, Hoffman L, Hashizume R, Gravohac G, Rice G, Wadhwani NR, Jie C, Pundy T, Mania-Farnell B, Mayanil CS, Soares MB, Lei T, James CD, Foreman NK, et al. Global Reduction of H3K4me3 Improves Chemotherapeutic Efficacy for Pediatric Ependymomas. Neoplasia (New York, N.Y.). 21: 505-515. PMID 31005631 DOI: 10.1016/J.Neo.2019.03.012  0.302
2015 Malchenko S, Sredni ST, Hashimoto H, Kasai A, Nagayasu K, Xie J, Margaryan NV, Seiriki K, Lulla RR, Seftor RE, Pachman LM, Meltzer HY, Hendrix MJ, Soares MB. A mouse model of human primitive neuroectodermal tumors resulting from microenvironmentally-driven malignant transformation of orthotopically transplanted radial glial cells. Plos One. 10: e0121707. PMID 25826270 DOI: 10.1371/Journal.Pone.0121707  0.324
2014 McErlean P, Favoreto S, Costa FF, Shen J, Quraishi J, Biyasheva A, Cooper JJ, Scholtens DM, Vanin EF, de Bonaldo MF, Xie H, Soares MB, Avila PC. Human rhinovirus infection causes different DNA methylation changes in nasal epithelial cells from healthy and asthmatic subjects. Bmc Medical Genomics. 7: 37. PMID 24947756 DOI: 10.1186/1755-8794-7-37  0.643
2013 McErlean P, Favoreto S, Costa F, Shen J, Biyasheva A, Bonaldo MdF, Scholtens D, Xie H, Soares MB, Avila PC. DNA Methylation Profiling in Asthmatic and Non Asthmatic Nasal Epithelial Cells During Respiratory Virus Infection Journal of Allergy and Clinical Immunology. 131: AB136. DOI: 10.1016/J.JACI.2012.12.1151  0.614
2012 Chan CX, Soares MB, Bonaldo MF, Wisecaver JH, Hackett JD, Anderson DM, Erdner DL, Bhattacharya D. ANALYSIS OF ALEXANDRIUM TAMARENSE (DINOPHYCEAE) GENES REVEALS THE COMPLEX EVOLUTIONARY HISTORY OF A MICROBIAL EUKARYOTE(). Journal of Phycology. 48: 1130-1142. PMID 23066170 DOI: 10.1111/J.1529-8817.2012.01194.X  0.325
2012 Zhang X, Wallace AD, Du P, Lin S, Baccarelli AA, Jiang H, Jafari N, Zheng Y, Xie H, Soares MB, Kibbe WA, Hou L. Genome-wide study of DNA methylation alterations in response to diazinon exposure in vitro. Environmental Toxicology and Pharmacology. 34: 959-68. PMID 22964155 DOI: 10.1016/J.Etap.2012.07.012  0.705
2012 Hoxha E, Lambers E, Xie H, De Andrade A, Krishnamurthy P, Wasserstrom JA, Ramirez V, Thal M, Verma SK, Soares MB, Kishore R. Histone deacetylase 1 deficiency impairs differentiation and electrophysiological properties of cardiomyocytes derived from induced pluripotent cells. Stem Cells (Dayton, Ohio). 30: 2412-22. PMID 22915496 DOI: 10.1002/Stem.1209  0.644
2012 Zhang X, Wallace AD, Du P, Kibbe WA, Jafari N, Xie H, Lin S, Baccarelli A, Soares MB, Hou L. DNA methylation alterations in response to pesticide exposure in vitro. Environmental and Molecular Mutagenesis. 53: 542-9. PMID 22847954 DOI: 10.1002/Em.21718  0.698
2012 Martin J, Bryar P, Mets M, Weinstein J, Vanin EF, Costa FF, Soares MB, Laurie NA. Abstract 5037: Identifying differentially expressed microRNAs in retinoblastoma Cancer Research. 72: 5037-5037. DOI: 10.1158/1538-7445.Am2012-5037  0.316
2012 Bischof JM, Scholtens D, Arndt K, Wang M, Wang D, Huang C, Bonaldo MdF, Gilbertson RJ, Soares MB. Abstract 3002: Identification of frequently altered protein networks in ependymomas Cancer Research. 72: 3002-3002. DOI: 10.1158/1538-7445.Am2012-3002  0.322
2012 Costa FF, Bischof JM, Vanin EF, Lulla RR, Sredni ST, Rajaram V, Wang M, Renaud G, Passetti F, Tomita T, Goldman S, Bonaldo MF, Soares MB. Abstract 198: Identification of differentially expressed microRNAs and other non-coding RNAs in ependymomas Cancer Research. 72: 198-198. DOI: 10.1158/1538-7445.Am2012-198  0.301
2011 de Andrade A, Wang M, Bonaldo MF, Xie H, Soares MB. Genetic and epigenetic variations contributed by Alu retrotransposition. Bmc Genomics. 12: 617. PMID 22185517 DOI: 10.1186/1471-2164-12-617  0.629
2011 Molognoni F, Cruz AT, Meliso FM, Morais AS, Souza CF, Xander P, Bischof JM, Costa FF, Soares MB, Liang G, Jones PA, Jasiulionis MG. Epigenetic reprogramming as a key contributor to melanocyte malignant transformation. Epigenetics : Official Journal of the Dna Methylation Society. 6: 450-64. PMID 21343701 DOI: 10.4161/Epi.6.4.14917  0.363
2011 Xie H, Wang M, de Andrade A, Bonaldo Mde F, Galat V, Arndt K, Rajaram V, Goldman S, Tomita T, Soares MB. Genome-wide quantitative assessment of variation in DNA methylation patterns. Nucleic Acids Research. 39: 4099-108. PMID 21278160 DOI: 10.1093/Nar/Gkr017  0.684
2011 Wang M, Xie H, Stellpflug W, Rajaram V, Bonaldo Mde F, Goldman S, Tomita T, Soares MB. BTECH: a platform to integrate genomic, transcriptomic and epigenomic alterations in brain tumors. Neuroinformatics. 9: 59-67. PMID 21210251 DOI: 10.1007/S12021-010-9091-9  0.668
2010 Ichi S, Costa FF, Bischof JM, Nakazaki H, Shen YW, Boshnjaku V, Sharma S, Mania-Farnell B, McLone DG, Tomita T, Soares MB, Mayanil CS. Folic acid remodels chromatin on Hes1 and Neurog2 promoters during caudal neural tube development. The Journal of Biological Chemistry. 285: 36922-32. PMID 20833714 DOI: 10.1074/Jbc.M110.126714  0.33
2010 Hamm CA, Stevens JW, Xie H, Vanin EF, Morcuende JA, Abdulkawy H, Seftor EA, Sredni ST, Bischof JM, Wang D, Malchenko S, Bonaldo Mde F, Casavant TL, Hendrix MJ, Soares MB. Microenvironment alters epigenetic and gene expression profiles in Swarm rat chondrosarcoma tumors. Bmc Cancer. 10: 471. PMID 20809981 DOI: 10.1186/1471-2407-10-471  0.764
2010 Berkofsky-Fessler W, Buzzai M, Kim MK, Fruchtman S, Najfeld V, Min DJ, Costa FF, Bischof JM, Soares MB, McConnell MJ, Zhang W, Levine R, Gilliland DG, Calogero R, Licht JD. Transcriptional profiling of polycythemia vera identifies gene expression patterns both dependent and independent from the action of JAK2V617F. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 16: 4339-52. PMID 20601445 DOI: 10.1158/1078-0432.Ccr-10-1092  0.389
2010 Macagno ER, Gaasterland T, Edsall L, Bafna V, Soares MB, Scheetz T, Casavant T, Da Silva C, Wincker P, Tasiemski A, Salzet M. Construction of a medicinal leech transcriptome database and its application to the identification of leech homologs of neural and innate immune genes. Bmc Genomics. 11: 407. PMID 20579359 DOI: 10.1186/1471-2164-11-407  0.373
2010 Malchenko S, Galat V, Seftor EA, Vanin EF, Costa FF, Seftor RE, Soares MB, Hendrix MJ. Cancer hallmarks in induced pluripotent cells: new insights. Journal of Cellular Physiology. 225: 390-3. PMID 20568225 DOI: 10.1002/Jcp.22280  0.323
2010 Xie H, Wang M, Bonaldo Mde F, Rajaram V, Stellpflug W, Smith C, Arndt K, Goldman S, Tomita T, Soares MB. Epigenomic analysis of Alu repeats in human ependymomas. Proceedings of the National Academy of Sciences of the United States of America. 107: 6952-7. PMID 20351280 DOI: 10.1073/Pnas.0913836107  0.69
2010 Sredni ST, Bonaldo Mde F, Costa FF, Huang CC, Hamm CA, Rajaram V, Tomita T, Goldman S, Bischof JM, Soares MB. Upregulation of mir-221 and mir-222 in atypical teratoid/rhabdoid tumors: potential therapeutic targets. Child's Nervous System : Chns : Official Journal of the International Society For Pediatric Neurosurgery. 26: 279-83. PMID 20012062 DOI: 10.1007/S00381-009-1028-Y  0.688
2010 Lewandowska MA, Costa FF, Bischof JM, Williams SH, Soares MB, Harris A. Multiple mechanisms influence regulation of the cystic fibrosis transmembrane conductance regulator gene promoter. American Journal of Respiratory Cell and Molecular Biology. 43: 334-41. PMID 19855085 DOI: 10.1165/Rcmb.2009-0149Oc  0.373
2010 Hendrix MJC, Seftor EA, Lynne-Marie P, Margaryan NV, Katharine H, Richard SEB, Kirschmann DA, Costa FF, Bischof JM, Maria dFB, Soares MB, Strizzi L. Targeting an embryonic signaling pathway to suppress the metastatic phenotype Clinical Cancer Research. 16. DOI: 10.1158/Diag-10-Pl7-3  0.345
2009 Costa FF, Seftor EA, Bischof JM, Kirschmann DA, Strizzi L, Arndt K, Bonaldo Mde F, Soares MB, Hendrix MJ. Epigenetically reprogramming metastatic tumor cells with an embryonic microenvironment. Epigenomics. 1: 387-98. PMID 20495621 DOI: 10.2217/Epi.09.25  0.359
2009 Hamm CA, Xie H, Costa FF, Vanin EF, Seftor EA, Sredni ST, Bischof J, Wang D, Bonaldo MF, Hendrix MJ, Soares MB. Global demethylation of rat chondrosarcoma cells after treatment with 5-aza-2'-deoxycytidine results in increased tumorigenicity. Plos One. 4: e8340. PMID 20019818 DOI: 10.1371/Journal.Pone.0008340  0.77
2009 Kondo A, Goldman S, Lulla RR, Mania-Farnell B, Vanin EF, Sredni ST, Rajaram V, Soares MB, Tomita T. Longitudinal assessment of regional directed delivery in a rodent malignant glioma model. Journal of Neurosurgery. Pediatrics. 4: 592-8. PMID 19951051 DOI: 10.3171/2009.7.Peds09186  0.31
2009 Yadav AK, Renfrow JJ, Scholtens DM, Xie H, Duran GE, Bredel C, Vogel H, Chandler JP, Chakravarti A, Robe PA, Das S, Scheck AC, Kessler JA, Soares MB, Sikic BI, et al. Monosomy of chromosome 10 associated with dysregulation of epidermal growth factor signaling in glioblastomas. Jama. 302: 276-89. PMID 19602687 DOI: 10.1001/Jama.2009.1022  0.67
2009 Xie H, Wang M, Bonaldo Mde F, Smith C, Rajaram V, Goldman S, Tomita T, Soares MB. High-throughput sequence-based epigenomic analysis of Alu repeats in human cerebellum. Nucleic Acids Research. 37: 4331-40. PMID 19458156 DOI: 10.1093/Nar/Gkp393  0.69
2009 Xie H, Wang M, Bischof J, Bonaldo Mde F, Soares MB. SNP-based prediction of the human germ cell methylation landscape. Genomics. 93: 434-40. PMID 19442638 DOI: 10.1016/J.Ygeno.2009.01.005  0.66
2009 Soares MB, de Fatima Bonaldo M, Hackett JD, Bhattacharya D. Expressed sequence tags: normalization and subtraction of cDNA libraries expressed sequence tags\ normalization and subtraction of cDNA libraries. Methods in Molecular Biology (Clifton, N.J.). 533: 109-22. PMID 19277560 DOI: 10.1007/978-1-60327-136-3_6  0.39
2008 Gomulski LM, Dimopoulos G, Xi Z, Soares MB, Bonaldo MF, Malacrida AR, Gasperi G. Gene discovery in an invasive tephritid model pest species, the Mediterranean fruit fly, Ceratitis capitata. Bmc Genomics. 9: 243. PMID 18500975 DOI: 10.1186/1471-2164-9-243  0.388
2008 Bonnet A, Iannuccelli E, Hugot K, Benne F, Bonaldo MF, Soares MB, Hatey F, Tosser-Klopp G. A pig multi-tissue normalised cDNA library: large-scale sequencing, cluster analysis and 9K micro-array resource generation. Bmc Genomics. 9: 17. PMID 18194535 DOI: 10.1186/1471-2164-9-17  0.323
2008 Yamasaki C, Murakami K, Fujii Y, Sato Y, Harada E, Takeda J, Taniya T, Sakate R, Kikugawa S, Shimada M, Tanino M, Koyanagi KO, Barrero RA, Gough C, ... ... Soares MB, et al. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. Nucleic Acids Research. 36: D793-9. PMID 18089548 DOI: 10.1093/Nar/Gkm999  0.354
2007 Koutsos AC, Blass C, Meister S, Schmidt S, MacCallum RM, Soares MB, Collins FH, Benes V, Zdobnov E, Kafatos FC, Christophides GK. Life cycle transcriptome of the malaria mosquito Anopheles gambiae and comparison with the fruitfly Drosophila melanogaster. Proceedings of the National Academy of Sciences of the United States of America. 104: 11304-9. PMID 17563388 DOI: 10.1073/Pnas.0703988104  0.382
2007 Nene V, Wortman JR, Lawson D, Haas B, Kodira C, Tu ZJ, Loftus B, Xi Z, Megy K, Grabherr M, Ren Q, Zdobnov EM, Lobo NF, Campbell KS, Brown SE, ... ... Soares MB, et al. Genome sequence of Aedes aegypti, a major arbovirus vector. Science (New York, N.Y.). 316: 1718-23. PMID 17510324 DOI: 10.1126/Science.1138878  0.343
2007 Postovit LM, Costa FF, Bischof JM, Seftor EA, Wen B, Seftor RE, Feinberg AP, Soares MB, Hendrix MJ. The commonality of plasticity underlying multipotent tumor cells and embryonic stem cells. Journal of Cellular Biochemistry. 101: 908-17. PMID 17177292 DOI: 10.1002/Jcb.21227  0.341
2006 Reyes-Prieto A, Hackett JD, Soares MB, Bonaldo MF, Bhattacharya D. Cyanobacterial contribution to algal nuclear genomes is primarily limited to plastid functions. Current Biology : Cb. 16: 2320-5. PMID 17141613 DOI: 10.1016/J.Cub.2006.09.063  0.343
2006 Zhang SS, Xu X, Liu MG, Zhao H, Soares MB, Barnstable CJ, Fu XY. A biphasic pattern of gene expression during mouse retina development. Bmc Developmental Biology. 6: 48. PMID 17044933 DOI: 10.1186/1471-213X-6-48  0.394
2006 Ma S, Kosorok MR, Huang J, Xie H, Manzella L, Soares MB. Robust semiparametric microarray normalization and significance analysis. Biometrics. 62: 555-61. PMID 16918920 DOI: 10.1111/J.1541-0420.2005.00452.X  0.648
2006 Attardo GM, Strickler-Dinglasan P, Perkin SA, Caler E, Bonaldo MF, Soares MB, El-Sayeed N, Aksoy S. Analysis of fat body transcriptome from the adult tsetse fly, Glossina morsitans morsitans. Insect Molecular Biology. 15: 411-24. PMID 16907828 DOI: 10.1111/J.1365-2583.2006.00649.X  0.313
2006 Lorenzini DM, da Silva PI, Soares MB, Arruda P, Setubal J, Daffre S. Discovery of immune-related genes expressed in hemocytes of the tarantula spider Acanthoscurria gomesiana. Developmental and Comparative Immunology. 30: 545-56. PMID 16386302 DOI: 10.1016/J.Dci.2005.09.001  0.369
2005 McGlinn E, Bueren KLv, Fiorenza S, Mo R, Poh AM, Forrest ARR, Soares MB, Bonaldo MdF, Grimmond S, Hui C, Wainwright B, Wicking C. Pax9 and Jagged1 act downstream of Gli3 in vertebrate limb development. Mechanisms of Development. 122: 1218-1233. PMID 16169709 DOI: 10.1016/J.Mod.2005.06.012  0.343
2005 Hackett JD, Scheetz TE, Yoon HS, Soares MB, Bonaldo MF, Casavant TL, Bhattacharya D. Insights into a dinoflagellate genome through expressed sequence tag analysis. Bmc Genomics. 6: 80. PMID 15921535 DOI: 10.1186/1471-2164-6-80  0.4
2005 Segal JP, Stallings NR, Lee CE, Zhao L, Socci N, Viale A, Harris TM, Soares MB, Childs G, Elmquist JK, Parker KL, Friedman JM. Use of laser-capture microdissection for the identification of marker genes for the ventromedial hypothalamic nucleus. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 25: 4181-8. PMID 15843621 DOI: 10.1523/Jneurosci.0158-05.2005  0.367
2005 Wang D, Huang J, Xie H, Manzella L, Soares MB. A robust two-way semi-linear model for normalization of cDNA microarray data. Bmc Bioinformatics. 6: 14. PMID 15663789 DOI: 10.1186/1471-2105-6-14  0.639
2004 Bonaldo MF, Bair TB, Scheetz TE, Snir E, Akabogu I, Bair JL, Berger B, Crouch K, Davis A, Eyestone ME, Keppel C, Kucaba TA, Lebeck M, Lin JL, de Melo AI, ... ... Soares MB, et al. 1274 full-open reading frames of transcripts expressed in the developing mouse nervous system. Genome Research. 14: 2053-63. PMID 15489326 DOI: 10.1101/Gr.2601304  0.339
2004 Severson DW, Knudson DL, Soares MB, Loftus BJ. Aedes aegypti genomics. Insect Biochemistry and Molecular Biology. 34: 715-21. PMID 15242713 DOI: 10.1016/J.Ibmb.2004.03.024  0.335
2004 Scheetz TE, Laffin JJ, Berger B, Holte S, Baumes SA, Brown R, Chang S, Coco J, Conklin J, Crouch K, Donohue M, Doonan G, Estes C, Eyestone M, Fishler K, ... ... Soares MB, et al. High-throughput gene discovery in the rat. Genome Research. 14: 733-41. PMID 15060017 DOI: 10.1101/Gr.1414204  0.704
2004 Laffin JJ, Scheetz TE, Bonaldo Mde F, Reiter RS, Chang S, Eyestone M, Abdulkawy H, Brown B, Roberts C, Tack D, Kucaba T, Lin JJ, Sheffield VC, Casavant TL, Soares MB. A comprehensive nonredundant expressed sequence tag collection for the developing Rattus norvegicus heart. Physiological Genomics. 17: 245-52. PMID 14762174 DOI: 10.1152/Physiolgenomics.00186.2003  0.685
2003 Lehane MJ, Aksoy S, Gibson W, Kerhornou A, Berriman M, Hamilton J, Soares MB, Bonaldo MF, Lehane S, Hall N. Adult midgut expressed sequence tags from the tsetse fly Glossina morsitans morsitans and expression analysis of putative immune response genes Genome Biology. 4: 1-10. PMID 14519198 DOI: 10.1186/Gb-2003-4-10-R63  0.379
2003 Scheetz TE, Trivedi N, Roberts CA, Kucaba T, Berger B, Robinson NL, Birkett CL, Gavin AJ, O'Leary B, Braun TA, Bonaldo MF, Robinson JP, Sheffield VC, Soares MB, Casavant TL. ESTprep: preprocessing cDNA sequence reads. Bioinformatics (Oxford, England). 19: 1318-24. PMID 12874042 DOI: 10.1093/Bioinformatics/Btg159  0.302
2002 Gavin AJ, Scheetz TE, Roberts CA, O'Leary B, Braun TA, Sheffield VC, Soares MB, Robinson JP, Casavant TL. Pooled library tissue tags for EST-based gene discovery. Bioinformatics (Oxford, England). 18: 1162-6. PMID 12217907 DOI: 10.1093/Bioinformatics/18.9.1162  0.338
2001 Netz DJ, Sahl HG, Marcelino R, dos Santos Nascimento J, de Oliveira SS, Soares MB, do Carmo de Freire Bastos M, Marcolino R. Molecular characterisation of aureocin A70, a multi-peptide bacteriocin isolated from Staphylococcus aureus. Journal of Molecular Biology. 311: 939-49. PMID 11531330 DOI: 10.1006/Jmbi.2001.4885  0.306
2001 Hartupee JC, Zhang H, Bonaldo MF, Soares MB, Dieckgraefe BK. Isolation and characterization of a cDNA encoding a novel member of the human regenerating protein family: Reg IV. Biochimica Et Biophysica Acta. 1518: 287-93. PMID 11311942 DOI: 10.1016/S0167-4781(00)00284-0  0.361
2000 Emmert-Buck MR, Strausberg RL, Krizman DB, Bonaldo MF, Bonner RF, Bostwick DG, Brown MR, Buetow KH, Chuaqui RF, Cole KA, Duray PH, Englert CR, Gillespie JW, Greenhut S, Grouse L, ... ... Soares MB, et al. Molecular profiling of clinical tissues specimens: feasibility and applications. The Journal of Molecular Diagnostics : Jmd. 2: 60-6. PMID 11272889 DOI: 10.1016/S1525-1578(10)60617-4  0.388
2000 Grimmond S, Van Hateren N, Siggers P, Arkell R, Larder R, Soares MB, de Fatima Bonaldo M, Smith L, Tymowska-Lalanne Z, Wells C, Greenfield A. Sexually dimorphic expression of protease nexin-1 and vanin-1 in the developing mouse gonad prior to overt differentiation suggests a role in mammalian sexual development. Human Molecular Genetics. 9: 1553-60. PMID 10888606 DOI: 10.1093/Hmg/9.10.1553  0.358
2000 Dimopoulos G, Casavant TL, Chang S, Scheetz T, Roberts C, Donohue M, Schultz J, Benes V, Bork P, Ansorge W, Soares MB, Kafatos FC. Anopheles gambiae pilot gene discovery project: identification of mosquito innate immunity genes from expressed sequence tags generated from immune-competent cell lines. Proceedings of the National Academy of Sciences of the United States of America. 97: 6619-24. PMID 10841561 DOI: 10.1073/Pnas.97.12.6619  0.361
2000 Emmert-Buck MR, Strausberg RL, Krizman DB, Bonaldo MF, Bonner RF, Bostwick DG, Brown MR, Buetow KH, Chuaqui RF, Cole KA, Duray PH, Englert CR, Gillespie JW, Greenhut S, Grouse L, ... ... Soares MB, et al. Molecular profiling of clinical tissue specimens: feasibility and applications. The American Journal of Pathology. 156: 1109-15. PMID 10751334 DOI: 10.1016/S0002-9440(10)64979-6  0.388
1999 Urményi TP, Bonaldo MF, Soares MB, Rondinelli E. Construction of a normalized cDNA library for the Trypanosoma cruzi genome project. The Journal of Eukaryotic Microbiology. 46: 542-4. PMID 10519221 DOI: 10.1111/J.1550-7408.1999.Tb06072.X  0.329
1999 Marra M, Hillier L, Kucaba T, Allen M, Barstead R, Beck C, Blistain A, Bonaldo M, Bowers Y, Bowles L, Cardenas M, Chamberlain A, Chappell J, Clifton S, Favello A, ... ... Soares M, et al. An encyclopedia of mouse genes. Nature Genetics. 21: 191-4. PMID 9988271 DOI: 10.1038/5976  0.395
1999 Laffin J, Chang S, Scheetz T, Munn K, Roberts C, Liu K, Lin J, Casavant T, Soares MB. A rat heart UniGene set for identification of spatially and/or temporally regulated genes during heart development Nature Genetics. 23: 74-74. DOI: 10.1038/14403  0.697
1997 Lawton LN, Bonaldo MF, Jelenc PC, Qiu L, Baumes SA, Marcelino RA, de Jesus GM, Wellington S, Knowles JA, Warburton D, Brown S, Soares MB. Identification of a novel member of the TGF-beta superfamily highly expressed in human placenta. Gene. 203: 17-26. PMID 9426002 DOI: 10.1016/S0378-1119(97)00485-X  0.342
1997 Soares MB. Identification and cloning of differentially expressed genes. Current Opinion in Biotechnology. 8: 542-6. PMID 9353235 DOI: 10.1016/S0958-1669(97)80026-2  0.399
1997 Ranta S, Lehesjoki AE, de Fatima Bonaldo M, Knowles JA, Hirvasniemi A, Ross B, de Jong PJ, Soares MB, de la Chapelle A, Gilliam TC. High-resolution mapping and transcript identification at the progressive epilepsy with mental retardation locus on chromosome 8p. Genome Research. 7: 887-96. PMID 9314494 DOI: 10.1101/Gr.7.9.887  0.303
1997 Kalachikov S, Migliazza A, Cayanis E, Fracchiolla NS, Bonaldo MF, Lawton L, Jelenc P, Ye X, Qu X, Chien M, Hauptschein R, Gaidano G, Vitolo U, Saglio G, Resegotti L, ... ... Soares MB, et al. Cloning and gene mapping of the chromosome 13q14 region deleted in chronic lymphocytic leukemia. Genomics. 42: 369-77. PMID 9205107 DOI: 10.1006/Geno.1997.4747  0.353
1997 Carter TA, Bönnemann CG, Wang CH, Obici S, Parano E, De Fatima Bonaldo M, Ross BM, Penchaszadeh GK, Mackenzie A, Soares MB, Kunkel LM, Gilliam TC. A multicopy transcription-repair gene, BTF2p44, maps to the SMA region and demonstrates SMA associated deletions. Human Molecular Genetics. 6: 229-36. PMID 9063743 DOI: 10.1093/Hmg/6.2.229  0.357
1997 Drmanac S, Stavropoulos NA, Labat I, Vonau J, Hauser B, Soares MB, Drmanac R. Gene-representing cDNA clusters defined by hybridization of 57,419 clones from infant brain libraries with short oligonucleotide probes. Genomics. 37: 29-40. PMID 8921367 DOI: 10.1006/Geno.1996.0517  0.382
1997 Bonaldo MF, Lennon G, Soares MB. Normalization and subtraction: two approaches to facilitate gene discovery. Genome Research. 6: 791-806. PMID 8889548 DOI: 10.1101/Gr.6.9.791  0.371
1996 Milosavljevic A, Zeremski M, Strezoska Z, Grujic D, Dyanov H, Batus S, Salbego D, Paunesku T, Soares MB, Crkvenjakov R. Discovering distinct genes represented in 29,570 clones from infant brain cDNA libraries by applying sequencing by hybridization methodology. Genome Research. 6: 132-41. PMID 8919692 DOI: 10.1101/Gr.6.2.132  0.355
1996 de Fatima Bonaldo M, Jelenc P, Su L, Lawton L, Yu MT, Warburton D, Soares MB. Identification and characterization of three genes and two pseudogenes on chromosome 13. Human Genetics. 97: 441-52. PMID 8834240 DOI: 10.1007/Bf02267064  0.355
1996 Lennon G, Auffray C, Polymeropoulos M, Soares MB. The I.M.A.G.E. Consortium: an integrated molecular analysis of genomes and their expression. Genomics. 33: 151-2. PMID 8617505 DOI: 10.1006/Geno.1996.0177  0.327
1996 Polymeropoulos MH, Ide S, Soares MB, Lennon GG. Sequence characterization and genetic mapping of the human VSNL1 gene, a homologue of the rat visinin-like peptide RNVP1. Genomics. 29: 273-5. PMID 8530085 DOI: 10.1006/Geno.1995.1244  0.386
1995 Berry R, Stevens TJ, Walter NA, Wilcox AS, Rubano T, Hopkins JA, Weber J, Goold R, Soares MB, Sikela JM. Gene-based sequence-tagged-sites (STSs) as the basis for a human gene map. Nature Genetics. 10: 415-23. PMID 7670491 DOI: 10.1038/Ng0895-415  0.388
1994 Bonaldo MF, Yu MT, Jelenc P, Brown S, Su L, Lawton L, Deaven L, Efstratiadis A, Warburton D, Soares MB. Selection of cDNAs using chromosome-specific genomic clones: application to human chromosome 13. Human Molecular Genetics. 3: 1663-73. PMID 7833926 DOI: 10.1093/Hmg/3.9.1663  0.33
1993 Dietrich P, Soares MB, Affonso MH, Floeter-Winter LM. The Trypanosoma cruzi ribosomal RNA-encoding gene: analysis of promoter and upstream intergenic spacer sequences. Gene. 125: 103-7. PMID 8449407 DOI: 10.1016/0378-1119(93)90753-P  0.326
1992 Soares MB. Precise Genetic Concepts Genes and Genomes: A Changing Perspective Maxine Singer Paul Berg Bioscience. 42: 211-211. DOI: 10.2307/1311841  0.328
1986 Soares MB, Turken A, Ishii D, Mills L, Episkopou V, Cotter S, Zeitlin S, Efstratiadis A. Rat insulin-like growth factor II gene. A single gene with two promoters expressing a multitranscript family. Journal of Molecular Biology. 192: 737-52. PMID 2438416 DOI: 10.1016/0022-2836(86)90025-2  0.321
1985 Soares MB, Schon E, Efstratiadis A. Rat LINE1: the origin and evolution of a family of long interspersed middle repetitive DNA elements. Journal of Molecular Evolution. 22: 117-33. PMID 2999412 DOI: 10.1007/Bf02101690  0.325
1985 Soares MB, Schon E, Henderson A, Karathanasis SK, Cate R, Zeitlin S, Chirgwin J, Efstratiadis A. RNA-mediated gene duplication: the rat preproinsulin I gene is a functional retroposon. Molecular and Cellular Biology. 5: 2090-103. PMID 2427930 DOI: 10.1128/Mcb.5.8.2090  0.38
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