| Year |
Citation |
Score |
| 2024 |
Bhattarai UR, Poulin R, Gemmell NJ, Dowle E. Genome assembly and annotation of the mermithid nematode Mermis nigrescens. G3 (Bethesda, Md.). 14. PMID 38301266 DOI: 10.1093/g3journal/jkae023 |
0.793 |
|
| 2023 |
Urban L, Miller AK, Eason D, Vercoe D, Shaffer M, Wilkinson SP, Jeunen GJ, Gemmell NJ, Digby A. Non-invasive real-time genomic monitoring of the critically endangered kākāpō. Elife. 12. PMID 38153986 DOI: 10.7554/eLife.84553 |
0.483 |
|
| 2023 |
Bond DM, Ortega-Recalde O, Laird MK, Hayakawa T, Richardson KS, Reese FCB, Kyle B, McIsaac-Williams BE, Robertson BC, van Heezik Y, Adams AL, Chang WS, Haase B, Mountcastle J, Driller M, ... ... Gemmell NJ, et al. The admixed brushtail possum genome reveals invasion history in New Zealand and novel imprinted genes. Nature Communications. 14: 6364. PMID 37848431 DOI: 10.1038/s41467-023-41784-8 |
0.539 |
|
| 2023 |
Guhlin J, Le Lec MF, Wold J, Koot E, Winter D, Biggs PJ, Galla SJ, Urban L, Foster Y, Cox MP, Digby A, Uddstrom LR, Eason D, Vercoe D, Davis T, ... ... Gemmell NJ, et al. Species-wide genomics of kākāpō provides tools to accelerate recovery. Nature Ecology & Evolution. PMID 37640765 DOI: 10.1038/s41559-023-02165-y |
0.479 |
|
| 2023 |
Miller AK, Brosnahan CL, Pande A, Baker CF, Geoghegan JL, Kitson J, Gemmell NJ, Dowle EJ. Formalin-fixed paraffin-embedded (FFPE) samples help to investigate transcriptomic responses in wildlife disease. Molecular Ecology Resources. PMID 37150904 DOI: 10.1111/1755-0998.13805 |
0.347 |
|
| 2023 |
Timoshevskaya N, Eşkut KI, Timoshevskiy VA, Robb SMC, Holt C, Hess JE, Parker HJ, Baker CF, Miller AK, Saraceno C, Yandell M, Krumlauf R, Narum SR, Lampman RT, Gemmell NJ, et al. An improved germline genome assembly for the sea lamprey Petromyzon marinus illuminates the evolution of germline-specific chromosomes. Cell Reports. 42: 112263. PMID 36930644 DOI: 10.1016/j.celrep.2023.112263 |
0.443 |
|
| 2023 |
Bentley BP, Carrasco-Valenzuela T, Ramos EKS, Pawar H, Souza Arantes L, Alexander A, Banerjee SM, Masterson P, Kuhlwilm M, Pippel M, Mountcastle J, Haase B, Uliano-Silva M, Formenti G, Howe K, ... ... Gemmell NJ, et al. Divergent sensory and immune gene evolution in sea turtles with contrasting demographic and life histories. Proceedings of the National Academy of Sciences of the United States of America. 120: e2201076120. PMID 36749728 DOI: 10.1073/pnas.2201076120 |
0.439 |
|
| 2023 |
Doherty JF, Bhattarai UR, Ferreira S, Poulin R, Gemmell NJ, Dowle EJ. The proof is in the poo: non-invasive method to detect endoparasitic infection. Molecular Ecology Resources. PMID 36740220 DOI: 10.1111/1755-0998.13763 |
0.689 |
|
| 2022 |
Bhattarai UR, Katuwal M, Poulin R, Gemmell NJ, Dowle E. Genome assembly and annotation of the European earwig Forficula auricularia (subspecies B). G3 (Bethesda, Md.). PMID 35972389 DOI: 10.1093/g3journal/jkac199 |
0.381 |
|
| 2022 |
Miller AK, Timoshevskaya N, Smith JJ, Gillum J, Sharif S, Clarke S, Baker C, Kitson J, Gemmell NJ, Alexander A. Population genomics of New Zealand pouched lamprey (kanakana; piharau; Geotria australis). The Journal of Heredity. PMID 35439308 DOI: 10.1093/jhered/esac014 |
0.415 |
|
| 2022 |
Cheng H, Jarvis ED, Fedrigo O, Koepfli KP, Urban L, Gemmell NJ, Li H. Haplotype-resolved assembly of diploid genomes without parental data. Nature Biotechnology. PMID 35332338 DOI: 10.1038/s41587-022-01261-x |
0.378 |
|
| 2021 |
Dussex N, van der Valk T, Morales HE, Wheat CW, Díez-Del-Molino D, von Seth J, Foster Y, Kutschera VE, Guschanski K, Rhie A, Phillippy AM, Korlach J, Howe K, Chow W, Pelan S, ... ... Gemmell NJ, et al. Population genomics of the critically endangered kākāpō. Cell Genomics. 1: 100002. PMID 36777713 DOI: 10.1016/j.xgen.2021.100002 |
0.429 |
|
| 2021 |
Miller AK, Mifsud JCO, Costa VA, Grimwood RM, Kitson J, Baker C, Brosnahan CL, Pande A, Holmes EC, Gemmell NJ, Geoghegan JL. Slippery when wet: cross-species transmission of divergent coronaviruses in bony and jawless fish and the evolutionary history of the . Virus Evolution. 7: veab050. PMID 34527280 DOI: 10.1093/ve/veab050 |
0.326 |
|
| 2021 |
Martini D, Dussex N, Robertson BC, Gemmell NJ, Knapp M. Evolution of the "world's only alpine parrot": Genomic adaptation or phenotypic plasticity, behaviour and ecology? Molecular Ecology. PMID 33973288 DOI: 10.1111/mec.15978 |
0.364 |
|
| 2021 |
Feng S, Stiller J, Deng Y, Armstrong J, Fang Q, Reeve AH, Xie D, Chen G, Guo C, Faircloth BC, Petersen B, Wang Z, Zhou Q, Diekhans M, Chen W, ... ... Gemmell NJ, et al. Author Correction: Dense sampling of bird diversity increases power of comparative genomics. Nature. PMID 33833441 DOI: 10.1038/s41586-021-03473-8 |
0.353 |
|
| 2021 |
Gemmell NJ. Repetitive DNA: genomic dark matter matters. Nature Reviews. Genetics. 22: 342. PMID 33782602 DOI: 10.1038/s41576-021-00354-8 |
0.335 |
|
| 2021 |
Bhattarai UR, Doherty JF, Dowle E, Gemmell NJ. The adaptiveness of host behavioural manipulation assessed using Tinbergen's four questions. Trends in Parasitology. PMID 33568325 DOI: 10.1016/j.pt.2021.01.006 |
0.708 |
|
| 2021 |
Macey JR, Pabinger S, Barbieri CG, Buring ES, Gonzalez VL, Mulcahy DG, DeMeo DP, Urban L, Hime PM, Prost S, Elliott AN, Gemmell NJ. Evidence of two deeply divergent co-existing mitochondrial genomes in the Tuatara reveals an extremely complex genomic organization. Communications Biology. 4: 116. PMID 33514857 DOI: 10.1038/s42003-020-01639-0 |
0.53 |
|
| 2020 |
Dussex N, Kutschera VE, Wiberg RAW, Parker DJ, Hunt GR, Gray RD, Rutherford K, Abe H, Fleischer RC, Ritchie MG, Rutz C, B Wolf J, Gemmell NJ. A genome-wide investigation of adaptive signatures in protein-coding genes related to tool behaviour in New Caledonian and Hawaiian crows. Molecular Ecology. PMID 33305388 DOI: 10.1111/mec.15775 |
0.47 |
|
| 2020 |
Feng S, Stiller J, Deng Y, Armstrong J, Fang Q, Reeve AH, Xie D, Chen G, Guo C, Faircloth BC, Petersen B, Wang Z, Zhou Q, Diekhans M, Chen W, ... ... Gemmell NJ, et al. Dense sampling of bird diversity increases power of comparative genomics. Nature. 587: 252-257. PMID 33177665 DOI: 10.1038/s41586-020-2873-9 |
0.563 |
|
| 2020 |
Gemmell NJ, Rutherford K, Prost S, Tollis M, Winter D, Macey JR, Adelson DL, Suh A, Bertozzi T, Grau JH, Organ C, Gardner PP, Muffato M, Patricio M, Billis K, et al. Publisher Correction: The tuatara genome reveals ancient features of amniote evolution. Nature. PMID 32811988 DOI: 10.1038/S41586-020-2661-6 |
0.365 |
|
| 2020 |
Gemmell NJ, Rutherford K, Prost S, Tollis M, Winter D, Macey JR, Adelson DL, Suh A, Bertozzi T, Grau JH, Organ C, Gardner PP, Muffato M, Patricio M, Billis K, et al. The tuatara genome reveals ancient features of amniote evolution. Nature. PMID 32760000 DOI: 10.1038/S41586-020-2561-9 |
0.562 |
|
| 2018 |
Blanchoud S, Rutherford K, Zondag L, Gemmell NJ, Wilson MJ. De novo draft assembly of the Botrylloides leachii genome provides further insight into tunicate evolution. Scientific Reports. 8: 5518. PMID 29615780 DOI: 10.1038/s41598-018-23749-w |
0.522 |
|
| 2017 |
Wu C, Jordan MD, Newcomb RD, Gemmell NJ, Bank S, Meusemann K, Dearden PK, Duncan EJ, Grosser S, Rutherford K, Gardner PP, Crowhurst RN, Steinwender B, Tooman LK, Stevens MI, et al. Analysis of the genome of the New Zealand giant collembolan (Holacanthella duospinosa) sheds light on hexapod evolution. Bmc Genomics. 18: 795. PMID 29041914 DOI: 10.1186/S12864-017-4197-1 |
0.506 |
|
| 2017 |
Bagshaw AT, Horwood LJ, Fergusson DM, Gemmell NJ, Kennedy MA. Microsatellite polymorphisms associated with human behavioural and psychological phenotypes including a gene-environment interaction. Bmc Medical Genetics. 18: 12. PMID 28158988 DOI: 10.1186/s12881-017-0374-y |
0.329 |
|
| 2015 |
Flynn T, Signal B, Johnson SL, Gemmell NJ. Mitochondrial genome diversity among six laboratory zebrafish (Danio rerio) strains. Mitochondrial Dna. 1-8. PMID 26477802 DOI: 10.3109/19401736.2015.1089536 |
0.331 |
|
| 2014 |
McRae KM, McEwan JC, Dodds KG, Gemmell NJ. Signatures of selection in sheep bred for resistance or susceptibility to gastrointestinal nematodes. Bmc Genomics. 15: 637. PMID 25074012 DOI: 10.1186/1471-2164-15-637 |
0.366 |
|
| 2013 |
Horan MP, Gemmell NJ, Wolff JN. From evolutionary bystander to master manipulator: The emerging roles for the mitochondrial genome as a modulator of nuclear gene expression European Journal of Human Genetics. 21: 1335-1337. PMID 23612574 DOI: 10.1038/ejhg.2013.75 |
0.327 |
|
| 2012 |
Sawaya SM, Lennon D, Buschiazzo E, Gemmell N, Minin VN. Measuring microsatellite conservation in mammalian evolution with a phylogenetic birth-death model. Genome Biology and Evolution. 4: 636-47. PMID 22593552 DOI: 10.1093/Gbe/Evs050 |
0.356 |
|
| 2011 |
Buschiazzo E, Beck JS, Gemmell NJ. Design and implementation of degenerate microsatellite primers for the mammalian clade Plos One. 6. PMID 22216321 DOI: 10.1371/journal.pone.0029582 |
0.394 |
|
| 2011 |
Osborne AJ, Brauning R, Schultz JK, Kennedy MA, Slate J, Gemmell NJ. Development of a predicted physical map of microsatellite locus positions for pinnipeds, with wider applicability to the Carnivora. Molecular Ecology Resources. 11: 503-13. PMID 21481208 DOI: 10.1111/J.1755-0998.2010.02962.X |
0.499 |
|
| 2010 |
Buschiazzo E, Gemmell NJ. Conservation of human microsatellites across 450 million years of evolution. Genome Biology and Evolution. 2: 153-65. PMID 20333231 DOI: 10.1093/gbe/evq007 |
0.474 |
|
| 2009 |
Abdelkrim J, Robertson B, Stanton JA, Gemmell N. Fast, cost-effective development of species-specific microsatellite markers by genomic sequencing. Biotechniques. 46: 185-92. PMID 19317661 DOI: 10.2144/000113084 |
0.441 |
|
| 2008 |
Merkel A, Gemmell NJ. Detecting microsatellites in genome data: variance in definitions and bioinformatic approaches cause systematic bias. Evolutionary Bioinformatics Online. 4: 1-6. PMID 19204802 DOI: 10.4137/ebo.s420 |
0.347 |
|
| 2008 |
Brandström M, Bagshaw AT, Gemmell NJ, Ellegren H. The relationship between microsatellite polymorphism and recombination hot spots in the human genome. Molecular Biology and Evolution. 25: 2579-87. PMID 18794217 DOI: 10.1093/Molbev/Msn201 |
0.303 |
|
| 2008 |
Merkel A, Gemmell N. Detecting short tandem repeats from genome data: opening the software black box. Briefings in Bioinformatics. 9: 355-66. PMID 18621747 DOI: 10.1093/bib/bbn028 |
0.319 |
|
| 2008 |
Warren WC, Hillier LW, Marshall Graves JA, Birney E, Ponting CP, Grützner F, Belov K, Miller W, Clarke L, Chinwalla AT, Yang SP, Heger A, Locke DP, Miethke P, Waters PD, ... ... Gemmell NJ, et al. Genome analysis of the platypus reveals unique signatures of evolution. Nature. 453: 175-83. PMID 18464734 DOI: 10.1038/Nature06936 |
0.465 |
|
| 2006 |
Buschiazzo E, Gemmell NJ. The rise, fall and renaissance of microsatellites in eukaryotic genomes. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 28: 1040-50. PMID 16998838 DOI: 10.1002/bies.20470 |
0.484 |
|
| 2006 |
Pierson MJ, Martinez-Arias R, Holland BR, Gemmell NJ, Hurles ME, Penny D. Deciphering past human population movements in Oceania: provably optimal trees of 127 mtDNA genomes. Molecular Biology and Evolution. 23: 1966-75. PMID 16855009 DOI: 10.1093/Molbev/Msl063 |
0.309 |
|
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