Lee W. Riley - Publications

Infectious Diseases & Immunity University of California, Berkeley, Berkeley, CA 
Microbiology, Immunology, Public Health

204 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Rubin J, Mussio K, Xu Y, Suh J, Riley LW. Prevalence of Antimicrobial Resistance Genes and Integrons in Commensal Gram-Negative Bacteria in a College Community. Microbial Drug Resistance (Larchmont, N.Y.). PMID 31985343 DOI: 10.1089/mdr.2019.0279  0.36
2019 Martins-Sorenson N, Snesrud E, Xavier DE, Cacci LC, Iavarone AT, McGann P, Riley LW, Moreira BM. A novel plasmid-encoded mcr-4.3 gene in a colistin-resistant Acinetobacter baumannii clinical strain. The Journal of Antimicrobial Chemotherapy. PMID 31578567 DOI: 10.1093/jac/dkz413  0.44
2018 Ordoñez C, Savage HP, Tarajia M, Rivera R, Weeks-Galindo C, Sambrano D, Riley L, Fernandez PL, Baumgarth N, Goodridge A. Both B-1a and B-1b cells exposed to Mycobacterium tuberculosis lipids differentiate into IgM antibody-secreting cells. Immunology. PMID 29455451 DOI: 10.1111/imm.12909  0.4
2017 Snyder RE, Rajan JV, Costa F, Lima HCAV, Calcagno JI, Couto RD, Riley LW, Reis MG, Ko AI, Ribeiro GS. Differences in the Prevalence of Non-Communicable Disease between Slum Dwellers and the General Population in a Large Urban Area in Brazil. Tropical Medicine and Infectious Disease. 2. PMID 30270904 DOI: 10.3390/tropicalmed2030047  0.72
2017 Stephens CM, Adams-Sapper S, Sekhon M, Johnson JR, Riley LW. Genomic Analysis of Factors Associated with Low Prevalence of Antibiotic Resistance in Extraintestinal Pathogenic Escherichia coli Sequence Type 95 Strains. Msphere. 2. PMID 28405633 DOI: 10.1128/mSphere.00390-16  0.52
2016 Zunt JR, Chi BH, Heimburger DC, Cohen CR, Strathdee S, Hobbs N, Thomas Y, Bale K, Salisbury K, Hernandez MT, Riley LW, Vermund SH, Van der Horst C. The National Institutes of Health Fogarty International Center Global Health Scholars and Fellows Program: Collaborating Across Five Consortia to Strengthen Research Training. The American Journal of Tropical Medicine and Hygiene. PMID 27382074 DOI: 10.4269/ajtmh.16-0190  1
2016 Martins N, Picão RC, Cerqueira-Alves M, Uehara A, Barbosa LC, Riley LW, Moreira BM. A new trilocus sequence-based multiplex-PCR to detect major Acinetobacter baumannii clones. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. PMID 27125687 DOI: 10.1016/j.meegid.2016.04.031  1
2016 Riley LW. Detection of drug resistance in Mycobacterium tuberculosis. Germs. 6: 7-9. PMID 27019278 DOI: 10.11599/germs.2016.1082  1
2015 Reis-Santos B, Pellacani-Posses I, Macedo LR, Golub JE, Riley LW, Maciel EL. Directly observed therapy of tuberculosis in Brazil: associated determinants and impact on treatment outcome. The International Journal of Tuberculosis and Lung Disease : the Official Journal of the International Union Against Tuberculosis and Lung Disease. 19: 1188-93. PMID 26459531 DOI: 10.5588/ijtld.14.0776  1
2015 Queiroz A, Medina-Cleghorn D, Marjanovic O, Nomura DK, Riley LW. Comparative metabolic profiling of mce1 operon mutant vs wild-type Mycobacterium tuberculosis strains. Pathogens and Disease. 73: ftv066. PMID 26319139 DOI: 10.1093/femspd/ftv066  0.44
2015 Laux da Costa L, Delcroix M, Dalla Costa ER, Prestes IV, Milano M, Francis SS, Unis G, Silva DR, Riley LW, Rossetti ML. A real-time PCR signature to discriminate between tuberculosis and other pulmonary diseases. Tuberculosis (Edinburgh, Scotland). 95: 421-5. PMID 26025597 DOI: 10.1016/j.tube.2015.04.008  1
2015 Ribeiro FK, Pan W, Bertolde A, Vinhas SA, Peres RL, Riley L, Palaci M, Maciel EL. Genotypic and Spatial Analysis of Mycobacterium tuberculosis Transmission in a High-Incidence Urban Setting. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 25948063 DOI: 10.1093/cid/civ365  1
2015 Unger A, Felzemburgh RD, Snyder RE, Ribeiro GS, Mohr S, Costa VB, Melendez AX, Reis RB, Santana FS, Riley LW, Reis MG, Ko AI. Hypertension in a brazilian urban slum population. Journal of Urban Health : Bulletin of the New York Academy of Medicine. 92: 446-59. PMID 25920334 DOI: 10.1007/s11524-015-9956-1  0.72
2015 Umene YD, Wong LK, Satoh T, Yamane K, Matsui M, Riley LW, Arakawa Y, Suzuki S. Molecular epidemiological characterization of uropathogenic escherichia coli from an outpatient urology clinic in rural Japan. Journal of Clinical Microbiology. 53: 681-3. PMID 25428151 DOI: 10.1128/JCM.03068-14  1
2015 Martins N, Picão RC, Adams-Sapper S, Riley LW, Moreira BM. Association of class 1 and 2 integrons with multidrug-resistant Acinetobacter baumannii international clones and Acinetobacter nosocomialis isolates. Antimicrobial Agents and Chemotherapy. 59: 698-701. PMID 25348522 DOI: 10.1128/AAC.02415-14  1
2015 Marlow MA, Maciel ELN, Sales CMM, Gomes T, Snyder RE, Daumas RP, Riley LW. Tuberculosis DALY-Gap: Spatial and Quantitative Comparison of Disease Burden Across Urban Slum and Non-slum Census Tracts Journal of Urban Health. 92: 622-634. DOI: 10.1007/s11524-015-9957-0  1
2015 Unger A, Felzemburgh RDM, Snyder RE, Ribeiro GS, Mohr S, Costa VBA, Melendez AXTO, Reis RB, Santana FS, Riley LW, Reis MG, Ko AI. Hypertension in a Brazilian Urban Slum Population Journal of Urban Health. 92: 446-459. DOI: 10.1007/s11524-015-9956-1  1
2014 Reis-Santos B, Gomes T, Locatelli R, de Oliveira ER, Sanchez MN, Horta BL, Riley LW, Maciel EL. Treatment outcomes in tuberculosis patients with diabetes: a polytomous analysis using Brazilian surveillance system. Plos One. 9: e100082. PMID 25003346 DOI: 10.1371/journal.pone.0100082  1
2014 Berman HF, Tartof SY, Reis JN, Reis MG, Riley LW. Distribution of superantigens in group A streptococcal isolates from Salvador, Brazil. Bmc Infectious Diseases. 14: 294. PMID 24885209 DOI: 10.1186/1471-2334-14-294  1
2014 Madhivanan P, Raphael E, Rumphs A, Krupp K, Ravi K, Srinivas V, Arun A, Reingold AL, Klausner JD, Riley LW. Characterization of culturable vaginal Lactobacillus species among women with and without bacterial vaginosis from the United States and India: a cross-sectional study. Journal of Medical Microbiology. 63: 931-5. PMID 24836413 DOI: 10.1099/jmm.0.073080-0  1
2014 Riley LW. Pandemic lineages of extraintestinal pathogenic Escherichia coli Clinical Microbiology and Infection. 20: 380-390. PMID 24766445 DOI: 10.1111/1469-0691.12646  1
2014 Berman H, Barberino MG, Moreira ED, Riley L, Reis JN. Distribution of strain type and antimicrobial susceptibility of Escherichia coli isolates causing meningitis in a large urban setting in Brazil. Journal of Clinical Microbiology. 52: 1418-22. PMID 24523478 DOI: 10.1128/JCM.03104-13  1
2014 Gomes T, Reis-Santos B, Bertolde A, Johnson JL, Riley LW, Maciel EL. Epidemiology of extrapulmonary tuberculosis in Brazil: a hierarchical model. Bmc Infectious Diseases. 14: 9. PMID 24400848 DOI: 10.1186/1471-2334-14-9  1
2014 Cunha EA, Ferrazoli L, Riley LW, Basta PC, Honer MR, Maia R, Costa IP. Incidence and transmission patterns of tuberculosis among indigenous populations in Brazil. MemóRias Do Instituto Oswaldo Cruz. 109: 108-13. PMID 24270999 DOI: 10.1590/0074-0276130082  1
2014 Sequeira PC, Senaratne RH, Riley LW. Inhibition of toll-like receptor 2 (TLR-2)-mediated response in human alveolar epithelial cells by mycolic acids and Mycobacterium tuberculosis mce1 operon mutant. Pathogens and Disease. 70: 132-40. PMID 24190334 DOI: 10.1111/2049-632X.12110  1
2014 Coelho-Souza T, Martins N, Maia F, Frases S, Bonelli RR, Riley LW, Moreira BM. Pyomelanin production: a rare phenotype in Acinetobacter baumannii. Journal of Medical Microbiology. 63: 152-4. PMID 24149622 DOI: 10.1099/jmm.0.064089-0  1
2014 Goodridge A, Zhang T, Miyata T, Lu S, Riley LW. Antiphospholipid IgM antibody response in acute and chronic Mycobacterium tuberculosis mouse infection model. The Clinical Respiratory Journal. 8: 137-44. PMID 23910993 DOI: 10.1111/crj.12049  1
2014 Snyder RE, Marlow MA, Riley LW. Ebola in urban slums: The elephant in the room The Lancet Global Health. 2: e685. DOI: 10.1016/S2214-109X(14)70339-0  1
2014 Snyder RE, Jaimes G, Riley LW, Faerstein E, Corburn J. A comparison of social and spatial determinants of health between formal and informal settlements in a large metropolitan setting in Brazil Journal of Urban Health. 91: 432-445. DOI: 10.1007/s11524-013-9848-1  1
2013 Berman HF, Riley LW. Identification of novel antimicrobial resistance genes from microbiota on retail spinach. Bmc Microbiology. 13: 272. PMID 24289541 DOI: 10.1186/1471-2180-13-272  1
2013 Ribeiro Macedo L, Reis-Santos B, Riley LW, Maciel EL. Treatment outcomes of tuberculosis patients in Brazilian prisons: A polytomous regression analysis International Journal of Tuberculosis and Lung Disease. 17: 1427-1434. PMID 24125446 DOI: 10.5588/ijtld.12.0918  1
2013 Martins N, Dalla-Costa L, Uehara AA, Riley LW, Moreira BM. Emergence of Acinetobacter baumannii international clone II in Brazil: reflection of a global expansion. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. 20: 378-80. PMID 24121023 DOI: 10.1016/j.meegid.2013.09.028  1
2013 Gomes T, Vinhas SA, Reis-Santos B, Palaci M, Peres RL, Aguiar PP, Ribeiro FK, Marques HS, Dettoni Vdo V, Johnson JL, Riley LW, Maciel EL. Extrapulmonary tuberculosis: Mycobacterium tuberculosis strains and host risk factors in a large urban setting in Brazil. Plos One. 8: e74517. PMID 24098337 DOI: 10.1371/journal.pone.0074517  1
2013 Cantrell SA, Leavell MD, Marjanovic O, Iavarone AT, Leary JA, Riley LW. Free mycolic acid accumulation in the cell wall of the mce1 operon mutant strain of Mycobacterium tuberculosis. Journal of Microbiology (Seoul, Korea). 51: 619-26. PMID 24037657 DOI: 10.1007/s12275-013-3092-y  1
2013 Reis-Santos B, Gomes T, Macedo LR, Horta BL, Riley LW, Maciel EL. Prevalence and patterns of multimorbidity among tuberculosis patients in Brazil: a cross-sectional study. International Journal For Equity in Health. 12: 61. PMID 23962018 DOI: 10.1186/1475-9276-12-61  1
2013 de Carvalho Girão VB, Martins N, Cacci LC, Coelho-Souza T, Nouér SA, Riley LW, Moreira BM. Dissemination of Acinetobacter nosocomialis clone among critically ill patients and the environment. Journal of Clinical Microbiology. 51: 2707-9. PMID 23698521 DOI: 10.1128/JCM.00915-13  1
2013 Reis-Santos B, Locatelli R, Horta BL, Faerstein E, Sanchez MN, Riley LW, Maciel EL. Socio-demographic and clinical differences in subjects with tuberculosis with and without diabetes mellitus in Brazil--a multivariate analysis. Plos One. 8: e62604. PMID 23638123 DOI: 10.1371/journal.pone.0062604  1
2013 Sousa VS, Rabello RF, Dias RC, Martins IS, Santos LB, Alves EM, Riley LW, Moreira BM. Time-based distribution of Staphylococcus saprophyticus pulsed field gel-electrophoresis clusters in community-acquired urinary tract infections. MemóRias Do Instituto Oswaldo Cruz. 108: 73-6. PMID 23440118 DOI: 10.1590/S0074-02762013000100012  1
2013 Coelho-Souza T, Reis JN, Martins N, Martins IS, Menezes AO, Reis MG, Silva NO, Dias RC, Riley LW, Moreira BM. Longitudinal surveillance for meningitis by Acinetobacter in a large urban setting in Brazil. Clinical Microbiology and Infection : the Official Publication of the European Society of Clinical Microbiology and Infectious Diseases. 19: E241-4. PMID 23398654 DOI: 10.1111/1469-0691.12145  1
2013 Martins N, Martins IS, de Freitas WV, de Matos JA, Girão VB, Coelho-Souza T, Maralhães AC, Cacci LC, de Figueiredo MP, Dias RC, Costa-Lourenço AP, Ferreira AL, Dalla-Costa L, Nouér SA, Santoro-Lopes G, ... Riley LW, et al. Imported and intensive care unit-born Acinetobacter baumannii clonal complexes: one-year prospective cohort study in intensive care patients. Microbial Drug Resistance (Larchmont, N.Y.). 19: 216-23. PMID 23336529 DOI: 10.1089/mdr.2012.0174  1
2013 Vinhas SA, Palaci M, Marques HS, Lobo de Aguiar PP, Ribeiro FK, Peres RL, Dietze R, Gomes HM, Suffys PN, Golub JE, Riley LW, Maciel EL. Mycobacterium tuberculosis DNA fingerprint clusters and its relationship with RD(Rio) genotype in Brazil. Tuberculosis (Edinburgh, Scotland). 93: 207-12. PMID 23232111 DOI: 10.1016/j.tube.2012.09.001  1
2013 Adams-Sapper S, Diep BA, Perdreau-Remington F, Riley LW. Clonal composition and community clustering of drug-susceptible and -resistant Escherichia coli isolates from bloodstream infections. Antimicrobial Agents and Chemotherapy. 57: 490-7. PMID 23147723 DOI: 10.1128/AAC.01025-12  1
2012 Takenami I, Finkmoore B, Machado A, Emodi K, Riley LW, Arruda S. Levels of interferon-gamma increase after treatment for latent tuberculosis infection in a high-transmission setting. Pulmonary Medicine. 2012: 757152. PMID 23320165 DOI: 10.1155/2012/757152  1
2012 Queiroz A, Sousa R, Heine C, Cardoso M, Guimarães LH, Machado PR, Carvalho EM, Riley LW, Wilson ME, Schriefer A. Association between an emerging disseminated form of leishmaniasis and Leishmania (Viannia) braziliensis strain polymorphisms. Journal of Clinical Microbiology. 50: 4028-34. PMID 23035200 DOI: 10.1128/JCM.02064-12  1
2012 Stavrum R, Valvatne H, Stavrum AK, Riley LW, Ulvestad E, Jonassen I, Doherty TM, Grewal HM. Mycobacterium tuberculosis Mce1 protein complex initiates rapid induction of transcription of genes involved in substrate trafficking. Genes and Immunity. 13: 496-502. PMID 22695749 DOI: 10.1038/gene.2012.24  1
2012 Smith CD, Berk SG, Brandl MT, Riley LW. Survival characteristics of diarrheagenic Escherichia coli pathotypes and Helicobacter pylori during passage through the free-living ciliate, Tetrahymena sp. Fems Microbiology Ecology. 82: 574-83. PMID 22680607 DOI: 10.1111/j.1574-6941.2012.01428.x  1
2012 Ribeiro GS, Tartof SY, Oliveira DW, Guedes AC, Reis MG, Riley LW, Ko AI. Surgery for valvular heart disease: a population-based study in a Brazilian urban center. Plos One. 7: e37855. PMID 22666401 DOI: 10.1371/journal.pone.0037855  1
2012 Adams-Sapper S, Sergeevna-Selezneva J, Tartof S, Raphael E, An Diep B, Perdreau-Remington F, Riley LW. Globally dispersed mobile drug-resistance genes in Gram-negative bacterial isolates from patients with bloodstream infections in a US urban general hospital Journal of Medical Microbiology. 61: 968-974. PMID 22493279 DOI: 10.1099/jmm.0.041970-0  1
2012 Goodridge A, Cueva C, Lahiff M, Muzanye G, Johnson JL, Nahid P, Riley LW. Anti-phospholipid antibody levels as biomarker for monitoring tuberculosis treatment response. Tuberculosis (Edinburgh, Scotland). 92: 243-7. PMID 22406155 DOI: 10.1016/j.tube.2012.02.004  1
2012 Martins N, Martins IS, de Freitas WV, de Matos JA, Magalhães ACG, Girão VBC, Dias RCS, de Souza TC, Pellegrino FLPC, Costa LD, Boasquevisque CHR, Nouér SA, Riley LW, Santoro-Lopes G, Moreira BM. Severe infection in a lung transplant recipient caused by donor-transmitted carbapenem-resistant Acinetobacter baumannii Transplant Infectious Disease. 14: 316-320. PMID 22168176 DOI: 10.1111/j.1399-3062.2011.00701.x  1
2012 Miyata T, Cheigh CI, Casali N, Goodridge A, Marjanovic O, Kendall LV, Riley LW. An adjunctive therapeutic vaccine against reactivation and post-treatment relapse tuberculosis. Vaccine. 30: 459-65. PMID 22079078 DOI: 10.1016/j.vaccine.2011.10.052  1
2011 Stavrum R, Stavrum AK, Valvatne H, Riley LW, Ulvestad E, Jonassen I, Assmus J, Doherty TM, Grewal HM. Modulation of transcriptional and inflammatory responses in murine macrophages by the Mycobacterium tuberculosis mammalian cell entry (Mce) 1 complex. Plos One. 6: e26295. PMID 22039457 DOI: 10.1371/journal.pone.0026295  1
2011 Marjanovic O, Iavarone AT, Riley LW. Sulfolipid accumulation in Mycobacterium tuberculosis disrupted in the mce2 operon. Journal of Microbiology (Seoul, Korea). 49: 441-7. PMID 21717330 DOI: 10.1007/s12275-011-0435-4  1
2011 Pellegrino FL, Vieira VV, Baio PV, dos Santos RM, dos Santos AL, Santos NG, Meohas MM, Santos RT, de Souza TC, da Silva Dias RC, Santoro-Lopes G, Riley LW, Moreira BM. Acinetobacter soli as a cause of bloodstream infection in a neonatal intensive care unit. Journal of Clinical Microbiology. 49: 2283-5. PMID 21525230 DOI: 10.1128/JCM.00326-11  1
2011 Raphael E, Wong LK, Riley LW. Extended-spectrum Beta-lactamase gene sequences in gram-negative saprophytes on retail organic and nonorganic spinach. Applied and Environmental Microbiology. 77: 1601-7. PMID 21216903 DOI: 10.1128/AEM.02506-10  1
2011 Tartof SY, Farrimond F, de Matos JA, Reis JN, Ramos RT, Andrade AN, dos Reis MG, Riley LW. Inverse association between Lancefield group G Streptococcus colonization and sore throat in slum and nonslum settings in Brazil. Journal of Clinical Microbiology. 49: 409-12. PMID 21048010 DOI: 10.1128/JCM.02095-10  1
2011 Hristea A, Olaru ID, Dorobat O, Nica M, Ion M, Moroti R, Arama V, Rafila A, Ceausu E, Riley LW. Gram negative bacterial bloodstream infections: Resistance patterns and risk factors | Infecţii ale torentului circulator cu bacili gram negativi: Tipuri de rezistenţǎ şi factori de risc Revista Romana De Medicina De Laborator. 19: 241-249.  1
2010 Tartof SY, Reis JN, Andrade AN, Ramos RT, Reis MG, Riley LW. Factors associated with Group A Streptococcus emm type diversification in a large urban setting in Brazil: a cross-sectional study. Bmc Infectious Diseases. 10: 327. PMID 21070669 DOI: 10.1186/1471-2334-10-327  1
2010 Cheigh CI, Senaratne R, Uchida Y, Casali N, Kendall LV, Riley LW. Posttreatment reactivation of tuberculosis in mice caused by Mycobacterium tuberculosis disrupted in mce1R. The Journal of Infectious Diseases. 202: 752-9. PMID 20629532 DOI: 10.1086/655224  1
2010 Martins IS, Faria FC, Miguel MA, Dias MP, Cardoso FL, Magalhães AC, Mascarenhas LA, Nouér SA, Barbosa AV, Vallim DC, Hofer E, Rabello RF, Rebello RF, Riley LW, Moreira BM. A cluster of Listeria monocytogenes infections in hospitalized adults. American Journal of Infection Control. 38: e31-6. PMID 20570397 DOI: 10.1016/j.ajic.2010.02.014  1
2010 Dunphy KY, Senaratne RH, Masuzawa M, Kendall LV, Riley LW. Attenuation of Mycobacterium tuberculosis functionally disrupted in a fatty acyl-coenzyme A synthetase gene fadD5. The Journal of Infectious Diseases. 201: 1232-9. PMID 20214478 DOI: 10.1086/651452  1
2010 Dias RC, Moreira BM, Riley LW. Use of fimH single-nucleotide polymorphisms for strain typing of clinical isolates of Escherichia coli for epidemiologic investigation. Journal of Clinical Microbiology. 48: 483-8. PMID 20018817 DOI: 10.1128/JCM.01858-09  1
2010 Marjanovic O, Miyata T, Goodridge A, Kendall LV, Riley LW. Mce2 operon mutant strain of Mycobacterium tuberculosis is attenuated in C57BL/6 mice. Tuberculosis (Edinburgh, Scotland). 90: 50-6. PMID 19963438 DOI: 10.1016/j.tube.2009.10.004  1
2010 Delcroix M, Riley LW. Cell-penetrating peptides for antiviral drug development Pharmaceuticals. 3: 448-470. DOI: 10.3390/ph3030448  1
2009 Kiemer AK, Senaratne RH, Hoppstädter J, Diesel B, Riley LW, Tabeta K, Bauer S, Beutler B, Zuraw BL. Attenuated activation of macrophage TLR9 by DNA from virulent mycobacteria. Journal of Innate Immunity. 1: 29-45. PMID 20375564 DOI: 10.1159/000142731  1
2009 Dias RC, Marangoni DV, Smith SP, Alves EM, Pellegrino FL, Riley LW, Moreira BM. Clonal composition of Escherichia coli causing community-acquired urinary tract infections in the State of Rio de Janeiro, Brazil. Microbial Drug Resistance (Larchmont, N.Y.). 15: 303-8. PMID 19857137 DOI: 10.1089/mdr.2009.0067  1
2009 Dias RC, Marangoni DV, Riley LW, Moreira BM. Identification of uropathogenic Escherichia coli clonal group A (CgA) in hospitalised patients. MemóRias Do Instituto Oswaldo Cruz. 104: 787-9. PMID 19820843  1
2009 Ajiboye RM, Solberg OD, Lee BM, Raphael E, Debroy C, Riley LW. Global spread of mobile antimicrobial drug resistance determinants in human and animal Escherichia coli and Salmonella strains causing community-acquired infections. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 49: 365-71. PMID 19538087 DOI: 10.1086/600301  1
2009 Schriefer A, Guimarães LH, Machado PR, Lessa M, Lessa HA, Lago E, Ritt G, Góes-Neto A, Schriefer AL, Riley LW, Carvalho EM. Geographic clustering of leishmaniasis in northeastern Brazil. Emerging Infectious Diseases. 15: 871-6. PMID 19523284 DOI: 10.3201/eid1506.080406  1
2009 Machado A, Finkmoore B, Emodi K, Takenami I, Barbosa T, Tavares M, Reis MG, Arruda S, Riley LW. Risk factors for failure to complete a course of latent tuberculosis infection treatment in Salvador, Brazil International Journal of Tuberculosis and Lung Disease. 13: 719-725. PMID 19460247  1
2009 Inumaru VTG, Nogueira PA, Butuem IV, Riley LW, Ferrazoli L. Reactive nitrogen intermediate susceptibility of mycobacterium tuberculosis genotypes in an Urban setting International Journal of Tuberculosis and Lung Disease. 13: 665-668. PMID 19383204  1
2009 Machado A, Emodi K, Takenami I, Finkmoore BC, Barbosa T, Carvalho J, Cavalcanti L, Santos G, Tavares M, Mota M, Barreto F, Reis MG, Arruda S, Riley LW. Analysis of discordance between the tuberculin skin test and the interferon-gamma release assay International Journal of Tuberculosis and Lung Disease. 13: 446-453. PMID 19335949  1
2009 Riley LW. Molecular epidemiology Bacterial Infections of Humans: Epidemiology and Control. 69-89. DOI: 10.1007/978-0-387-09843-2_3  1
2008 Reis JN, Palma T, Ribeiro GS, Pinheiro RM, Ribeiro CT, Cordeiro SM, da Silva Filho HP, Moschioni M, Thompson TA, Spratt B, Riley LW, Barocchi MA, Reis MG, Ko AI. Transmission of Streptococcus pneumoniae in an urban slum community. The Journal of Infection. 57: 204-13. PMID 18672297 DOI: 10.1016/j.jinf.2008.06.017  1
2008 Pellegrino FL, Casali N, Nouér SA, Riley LW, Moreira BM. A carbapenem-susceptible Pseudomonas aeruginosa strain carrying the bla(SPM) gene. Diagnostic Microbiology and Infectious Disease. 61: 214-6. PMID 18308497 DOI: 10.1016/j.diagmicrobio.2008.01.005  1
2008 Baethgen LF, Weidlich L, Moraes C, Klein C, Nunes LS, Cafrune PI, Lemos AP, Rios SS, Abreu MF, Kmetzsch C, Sperb AF, Riley LW, Rossetti MLR, Zaha A. Epidemiology of meningococcal disease in southern Brazil from 1995 to 2003, and molecular characterization of Neisseria meningitidis using multilocus sequence typing Tropical Medicine and International Health. 13: 31-40. PMID 18290999 DOI: 10.1111/j.1365-3156.2007.01970.x  1
2008 Ling DI, Flores LL, Riley LW, Pai M. Commercial nucleic-acid amplification tests for diagnosis of pulmonary tuberculosis in respiratory specimens: meta-analysis and meta-regression. Plos One. 3: e1536. PMID 18253484 DOI: 10.1371/journal.pone.0001536  1
2008 Loui C, Grigoryan G, Huang H, Riley LW, Lu S. Bacterial communities associated with retail alfalfa sprouts. Journal of Food Protection. 71: 200-4. PMID 18236685  1
2008 Smith SP, Manges AR, Riley LW. Temporal changes in the prevalence of community-acquired antimicrobial-resistant urinary tract infection affected by Escherichia coli clonal group composition. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 46: 689-95. PMID 18230040 DOI: 10.1086/527386  1
2008 Senaratne RH, Sidders B, Sequeira P, Saunders G, Dunphy K, Marjanovic O, Reader JR, Lima P, Chan S, Kendall S, McFadden J, Riley LW. Mycobacterium tuberculosis strains disrupted in mce3 and mce4 operons are attenuated in mice. Journal of Medical Microbiology. 57: 164-70. PMID 18201981 DOI: 10.1099/jmm.0.47454-0  1
2008 Cantrell SA, Pascopella L, Flood J, Crane CM, Kendall LV, Riley LW. Community-wide transmission of a strain of Mycobacterium tuberculosis that causes reduced lung pathology in mice. Journal of Medical Microbiology. 57: 21-7. PMID 18065663 DOI: 10.1099/jmm.0.47252-0  1
2008 da Silva Dias RC, Borges-Neto AA, D'Almeida Ferraiuoli GI, de-Oliveira MP, Riley LW, Moreira BM. Prevalence of AmpC and other beta-lactamases in enterobacteria at a large urban university hospital in Brazil. Diagnostic Microbiology and Infectious Disease. 60: 79-87. PMID 17900845 DOI: 10.1016/j.diagmicrobio.2007.07.018  1
2007 Manges AR, Smith SP, Lau BJ, Nuval CJ, Eisenberg JN, Dietrich PS, Riley LW. Retail meat consumption and the acquisition of antimicrobial resistant Escherichia coli causing urinary tract infections: a case-control study. Foodborne Pathogens and Disease. 4: 419-31. PMID 18041952 DOI: 10.1089/fpd.2007.0026  1
2007 Rabello RF, Moreira BM, Lopes RM, Teixeira LM, Riley LW, Castro AC. Multilocus sequence typing of Staphylococcus aureus isolates recovered from cows with mastitis in Brazilian dairy herds. Journal of Medical Microbiology. 56: 1505-11. PMID 17965353 DOI: 10.1099/jmm.0.47357-0  1
2007 Unger A, Riley LW. Slum health: from understanding to action. Plos Medicine. 4: 1561-6. PMID 17958462 DOI: 10.1371/journal.pmed.0040295  1
2007 Tartof SY, Solberg OD, Riley LW. Genotypic analyses of uropathogenic Escherichia coli based on fimH single nucleotide polymorphisms (SNPs). Journal of Medical Microbiology. 56: 1363-9. PMID 17893175 DOI: 10.1099/jmm.0.47262-0  1
2007 Lima P, Sidders B, Morici L, Reader R, Senaratne R, Casali N, Riley LW. Enhanced mortality despite control of lung infection in mice aerogenically infected with a Mycobacterium tuberculosis mce1 operon mutant. Microbes and Infection / Institut Pasteur. 9: 1285-90. PMID 17890119 DOI: 10.1016/j.micinf.2007.05.020  1
2007 Alves MS, Riley LW, Moreira BM. A case of severe pancreatitis complicated by Raoultella planticola infection Journal of Medical Microbiology. 56: 696-698. PMID 17446297 DOI: 10.1099/jmm.0.46889-0  1
2007 de Bruin MA, Riley LW. Does vancomycin prescribing intervention affect vancomycin-resistant enterococcus infection and colonization in hospitals? A systematic review. Bmc Infectious Diseases. 7: 24. PMID 17425800 DOI: 10.1186/1471-2334-7-24  1
2007 Senaratne RH, Mougous JD, Reader JR, Williams SJ, Zhang T, Bertozzi CR, Riley LW. Vaccine efficacy of an attenuated but persistent Mycobacterium tuberculosis cysH mutant. Journal of Medical Microbiology. 56: 454-8. PMID 17374883 DOI: 10.1099/jmm.0.46983-0  1
2007 Vieira N, Bates SJ, Solberg OD, Ponce K, Howsmon R, Cevallos W, Trueba G, Riley L, Eisenberg JN. High prevalence of enteroinvasive Escherichia coli isolated in a remote region of northern coastal Ecuador. The American Journal of Tropical Medicine and Hygiene. 76: 528-33. PMID 17360879  1
2007 Croda J, Ramos JG, Matsunaga J, Queiroz A, Homma A, Riley LW, Haake DA, Reis MG, Ko AI. Leptospira immunoglobulin-like proteins as a serodiagnostic marker for acute leptospirosis. Journal of Clinical Microbiology. 45: 1528-34. PMID 17360842 DOI: 10.1128/JCM.02344-06  1
2007 Riley LW, Ko AI, Unger A, Reis MG. Slum health: diseases of neglected populations. Bmc International Health and Human Rights. 7: 2. PMID 17343758 DOI: 10.1186/1472-698X-7-2  1
2007 Casali N, Riley LW. A phylogenomic analysis of the Actinomycetales mce operons. Bmc Genomics. 8: 60. PMID 17324287 DOI: 10.1186/1471-2164-8-60  1
2007 Sato N, Fujimura T, Masuzawa M, Yogi Y, Matsuoka M, Kanoh M, Riley LW, Katsuoka K. Recombinant Mycobacterium leprae protein associated with entry into mammalian cells of respiratory and skin components. Journal of Dermatological Science. 46: 101-10. PMID 17317107 DOI: 10.1016/j.jdermsci.2007.01.006  1
2007 Giudice A, Camada I, Leopoldo PT, Pereira JM, Riley LW, Wilson ME, Ho JL, de Jesus AR, Carvalho EM, Almeida RP. Resistance of Leishmania (Leishmania) amazonensis and Leishmania (Viannia) braziliensis to nitric oxide correlates with disease severity in Tegumentary Leishmaniasis. Bmc Infectious Diseases. 7: 7. PMID 17316450 DOI: 10.1186/1471-2334-7-7  1
2007 Uchida Y, Casali N, White A, Morici L, Kendall LV, Riley LW. Accelerated immunopathological response of mice infected with Mycobacterium tuberculosis disrupted in the mce1 operon negative transcriptional regulator. Cellular Microbiology. 9: 1275-83. PMID 17223927 DOI: 10.1111/j.1462-5822.2006.00870.x  1
2007 Dogra S, Narang P, Mendiratta DK, Chaturvedi P, Reingold AL, Colford JM, Riley LW, Pai M. Comparison of a whole blood interferon-gamma assay with tuberculin skin testing for the detection of tuberculosis infection in hospitalized children in rural India. The Journal of Infection. 54: 267-76. PMID 16733068 DOI: 10.1016/j.jinf.2006.04.007  1
2006 Krekulová L, Řehák V, Riley LW. Structure and functions of hepatitis C virus proteins: 15 years after Folia Microbiologica. 51: 665-680. PMID 17455808 DOI: 10.1007/BF02931636  1
2006 Kalantri SP, Joshi R, Riley LW. Chikungunya epidemic: an Indian perspective. The National Medical Journal of India. 19: 315-22. PMID 17343016  1
2006 Pellegrino FL, Netto-dos Santos KR, Riley LW, Moreira BM. BlaGES carrying Pseudomonas aeruginosa isolates from a public hospital in Rio de Janeiro, Brazil. The Brazilian Journal of Infectious Diseases : An Official Publication of the Brazilian Society of Infectious Diseases. 10: 251-3. PMID 17293906 DOI: 10.1590/S1413-86702006000400007  1
2006 Eisenberg JN, Cevallos W, Ponce K, Levy K, Bates SJ, Scott JC, Hubbard A, Vieira N, Endara P, Espinel M, Trueba G, Riley LW, Trostle J. Environmental change and infectious disease: how new roads affect the transmission of diarrheal pathogens in rural Ecuador. Proceedings of the National Academy of Sciences of the United States of America. 103: 19460-5. PMID 17158216 DOI: 10.1073/pnas.0609431104  1
2006 Moreira ED, De Siqueira IC, Alcântara AP, Guereiro De Moura CG, De Carvalho WA, Riley L. Antimicrobial resistance of Escherichia coli strains causing community-acquired urinary tract infections among insured and uninsured populations in a large urban center Journal of Chemotherapy. 18: 255-260. PMID 17129835  1
2006 Martins IS, Moreira BM, Riley LW, Santoro-Lopes G. Outbreak of extended-spectrum beta-lactamase-producing Klebsiella pneumoniae infection among renal transplant recipients Journal of Hospital Infection. 64: 305-308. PMID 16978735 DOI: 10.1016/j.jhin.2006.07.011  1
2006 Alves MS, Dias RC, de Castro AC, Riley LW, Moreira BM. Identification of clinical isolates of indole-positive and indole-negative Klebsiella spp. Journal of Clinical Microbiology. 44: 3640-6. PMID 16928968 DOI: 10.1128/JCM.00940-06  1
2006 Aguiar-Alves F, Medeiros F, Fernandes O, Gudziki Pereira RM, Perdreau-Remington F, Riley LW. New Staphylococcus aureus genotyping method based on exotoxin (set) genes. Journal of Clinical Microbiology. 44: 2728-32. PMID 16891484 DOI: 10.1128/JCM.00376-06  1
2006 Riley LW. Of mice, men, and elephants: Mycobacterium tuberculosis cell envelope lipids and pathogenesis. The Journal of Clinical Investigation. 116: 1475-8. PMID 16741572 DOI: 10.1172/JCI28734  1
2006 Pai M, Joshi R, Dogra S, Mendiratta DK, Narang P, Kalantri S, Reingold AL, Colford JM, Riley LW, Menzies D. Serial testing of health care workers for tuberculosis using interferon-gamma assay. American Journal of Respiratory and Critical Care Medicine. 174: 349-55. PMID 16690977 DOI: 10.1164/rccm.200604-472OC  1
2006 Vivoni AM, Diep BA, de Gouveia Magalhães AC, Santos KR, Riley LW, Sensabaugh GF, Moreira BM. Clonal composition of Staphylococcus aureus isolates at a Brazilian university hospital: identification of international circulating lineages. Journal of Clinical Microbiology. 44: 1686-91. PMID 16672394 DOI: 10.1128/JCM.44.5.1686-1691.2006  1
2006 Kang H, Loui C, Clavijo RI, Riley LW, Lu S. Survival characteristics of Salmonella enterica serovar Enteritidis in chicken egg albumen Epidemiology and Infection. 134: 967-976. PMID 16650332 DOI: 10.1017/S0950268806006054  1
2006 Lu S, Tager LA, Chitale S, Riley LW. A cell-penetrating peptide derived from mammalian cell uptake protein of Mycobacterium tuberculosis. Analytical Biochemistry. 353: 7-14. PMID 16620748 DOI: 10.1016/j.ab.2006.01.044  1
2006 Solberg OD, Ajiboye RM, Riley LW. Origin of class 1 and 2 integrons and gene cassettes in a population-based sample of uropathogenic Escherichia coli. Journal of Clinical Microbiology. 44: 1347-51. PMID 16597861 DOI: 10.1128/JCM.44.4.1347-1351.2006  1
2006 Martins IS, Pessoa-Silva CL, Nouer SA, Pessoa de Araujo EG, Ferreira AL, Riley LW, Moreira BM. Endemic extended-spectrum beta-lactamase-producing Klebsiella pneumoniae at an intensive care unit: risk factors for colonization and infection. Microbial Drug Resistance (Larchmont, N.Y.). 12: 50-8. PMID 16584309 DOI: 10.1089/mdr.2006.12.50  1
2006 Senaratne RH, De Silva AD, Williams SJ, Mougous JD, Reader JR, Zhang T, Chan S, Sidders B, Lee DH, Chan J, Bertozzi CR, Riley LW. 5'-Adenosinephosphosulphate reductase (CysH) protects Mycobacterium tuberculosis against free radicals during chronic infection phase in mice. Molecular Microbiology. 59: 1744-53. PMID 16553880 DOI: 10.1111/j.1365-2958.2006.05075.x  1
2006 Mougous JD, Senaratne RH, Petzold CJ, Jain M, Lee DH, Schelle MW, Leavell MD, Cox JS, Leary JA, Riley LW, Bertozzi CR. A sulfated metabolite produced by stf3 negatively regulates the virulence of Mycobacterium tuberculosis. Proceedings of the National Academy of Sciences of the United States of America. 103: 4258-63. PMID 16537518 DOI: 10.1073/pnas.0510861103  1
2006 Myers WP, Westenhouse JL, Flood J, Riley LW. An ecological study of tuberculosis transmission in California. American Journal of Public Health. 96: 685-90. PMID 16507738 DOI: 10.2105/AJPH.2004.048132  1
2006 Cafrune PI, Riley LW, Possuelo LG, Valim ARM, Borges M, Ribeiro MO, Rossetti MLR, Zaha A. Recent transmission of tuberculosis involving retired patients Journal of Infection. 53: 370-376. PMID 16497379 DOI: 10.1016/j.jinf.2005.12.027  1
2006 Manges AR, Natarajan P, Solberg OD, Dietrich PS, Riley LW. The changing prevalence of drug-resistant Escherichia coli clonal groups in a community: evidence for community outbreaks of urinary tract infections. Epidemiology and Infection. 134: 425-31. PMID 16490149 DOI: 10.1017/S0950268805005005  1
2006 Clavijo RI, Loui C, Andersen GL, Riley LW, Lu S. Identification of genes associated with survival of Salmonella enterica serovar Enteritidis in chicken egg albumen. Applied and Environmental Microbiology. 72: 1055-64. PMID 16461649 DOI: 10.1128/AEM.72.2.1055-1064.2006  1
2006 Casali N, White AM, Riley LW. Regulation of the Mycobacterium tuberculosis mce1 operon. Journal of Bacteriology. 188: 441-9. PMID 16385033 DOI: 10.1128/JB.188.2.441-449.2006  1
2006 Manges AR, Perdreau-Remington F, Solberg O, Riley LW. Multidrug-resistant Escherichia coli clonal groups causing community-acquired bloodstream infections. The Journal of Infection. 53: 25-9. PMID 16269177 DOI: 10.1016/j.jinf.2005.09.012  1
2006 Pellegrino FLPC, Casali N, Dos Santos KRN, Nouér SA, Scheidegger EMD, Riley LW, Moreira BM. Pseudomonas aeruginosa epidemic strain carrying blaSPM metallo-beta-lactamase detected in Rio de Janeiro, Brazil Journal of Chemotherapy. 18: 151-156.  1
2005 Tartof SY, Solberg OD, Manges AR, Riley LW. Analysis of a uropathogenic Escherichia coli clonal group by multilocus sequence typing. Journal of Clinical Microbiology. 43: 5860-4. PMID 16333067 DOI: 10.1128/JCM.43.12.5860-5864.2005  1
2005 Flores LL, Pai M, Colford JM, Riley LW. In-house nucleic acid amplification tests for the detection of Mycobacterium tuberculosis in sputum specimens: meta-analysis and meta-regression. Bmc Microbiology. 5: 55. PMID 16202138 DOI: 10.1186/1471-2180-5-55  1
2005 Chiang CY, Riley LW. Exogenous reinfection in tuberculosis. The Lancet. Infectious Diseases. 5: 629-36. PMID 16183517 DOI: 10.1016/S1473-3099(05)70240-1  1
2005 Telles MAS, Ferrazoli L, Waldman EA, Giampaglia CMS, Martins MC, Ueki SYM, Chimara E, Silva CA, Cruz V, Waldman CCS, Heyn I, Hirono IU, Riley LW. A population-based study of drug resistance and transmission of tuberculosis in an urban community International Journal of Tuberculosis and Lung Disease. 9: 970-976. PMID 16158889  1
2005 da Silva Telles MA, Chimara E, Ferrazoli L, Riley LW. Mycobacterium kansasii: antibiotic susceptibility and PCR-restriction analysis of clinical isolates. Journal of Medical Microbiology. 54: 975-9. PMID 16157553 DOI: 10.1099/jmm.0.45965-0  1
2005 Vivoni AM, Santos KR, de-Oliveira MP, Giambiagi-deMarval M, Ferreira AL, Riley LW, Moreira BM. Mupirocin for controlling methicillin-resistant Staphylococcus aureus: lessons from a decade of use at a university hospital. Infection Control and Hospital Epidemiology. 26: 662-7. PMID 16092750 DOI: 10.1086/502599  1
2005 Riley LW, Manges AR. Epidemiologic versus genetic relatedness to define an outbreak-associated uropathogenic Escherichia coli group. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 41: 567-8; author reply . PMID 16028172 DOI: 10.1086/432123  1
2005 Pai M, Kalantri S, Pascopella L, Riley LW, Reingold AL. Bacteriophage-based assays for the rapid detection of rifampicin resistance in Mycobacterium tuberculosis: a meta-analysis. The Journal of Infection. 51: 175-87. PMID 16002146 DOI: 10.1016/j.jinf.2005.05.017  1
2005 Pai M, Gokhale K, Joshi R, Dogra S, Kalantri S, Mendiratta DK, Narang P, Daley CL, Granich RM, Mazurek GH, Reingold AL, Riley LW, Colford JM. Mycobacterium tuberculosis infection in health care workers in rural India: comparison of a whole-blood interferon gamma assay with tuberculin skin testing. Jama. 293: 2746-55. PMID 15941804 DOI: 10.1001/jama.293.22.2746  1
2005 Lalvani A, Richeldi L, Kunst H. Interferon gamma assays for tuberculosis. The Lancet. Infectious Diseases. 5: 322-4; author reply . PMID 15919613 DOI: 10.1016/S1473-3099(05)70118-3  1
2005 Krekulova L, Rehak V, Riley LW. Hepatitis C virus (HCV) 5'NC sequence variants and their association with hepatitis C risk groups. Journal of Clinical Virology : the Official Publication of the Pan American Society For Clinical Virology. 32: 300-4. PMID 15780809 DOI: 10.1016/j.jcv.2004.08.019  1
2005 de Filippis I, do Nascimento CR, Clementino MB, Sereno AB, Rebelo C, Souza NN, Riley LW. Rapid detection of Neisseria meningitidis in cerebrospinal fluid by one-step polymerase chain reaction of the nspA gene. Diagnostic Microbiology and Infectious Disease. 51: 85-90. PMID 15698712 DOI: 10.1016/j.diagmicrobio.2004.10.004  1
2005 Ehrt S, Guo XV, Hickey CM, Ryou M, Monteleone M, Riley LW, Schnappinger D. Controlling gene expression in mycobacteria with anhydrotetracycline and Tet repressor. Nucleic Acids Research. 33: e21. PMID 15687379 DOI: 10.1093/nar/gni013  1
2005 Ramchandani M, Manges AR, DebRoy C, Smith SP, Johnson JR, Riley LW. Possible animal origin of human-associated, multidrug-resistant, uropathogenic Escherichia coli. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 40: 251-7. PMID 15655743 DOI: 10.1086/426819  1
2004 Diehl GE, Yue HH, Hsieh K, Kuang AA, Ho M, Morici LA, Lenz LL, Cado D, Riley LW, Winoto A. TRAIL-R as a negative regulator of innate immune cell responses. Immunity. 21: 877-89. PMID 15589175 DOI: 10.1016/j.immuni.2004.11.008  1
2004 Pai M, Riley LW, Colford JM. Interferon-gamma assays in the immunodiagnosis of tuberculosis: a systematic review. The Lancet. Infectious Diseases. 4: 761-76. PMID 15567126 DOI: 10.1016/S1473-3099(04)01206-X  1
2004 Manges AR, Johnson JR, Riley LW. Intestinal population dynamics of UTI-causing Escherichia coli within heterosexual couples. Current Issues in Intestinal Microbiology. 5: 49-57. PMID 15460066  1
2004 dos Santos FB, Miagostovich MP, Nogueira RM, Schatzmayr HG, Riley LW, Harris E. Analysis of recombinant dengue virus polypeptides for dengue diagnosis and evaluation of the humoral immune response. The American Journal of Tropical Medicine and Hygiene. 71: 144-52. PMID 15306702  1
2004 Mougous JD, Petzold CJ, Senaratne RH, Lee DH, Akey DL, Lin FL, Munchel SE, Pratt MR, Riley LW, Leary JA, Berger JM, Bertozzi CR. Identification, function and structure of the mycobacterial sulfotransferase that initiates sulfolipid-1 biosynthesis. Nature Structural & Molecular Biology. 11: 721-9. PMID 15258569 DOI: 10.1038/nsmb802  1
2004 McHugh CG, Riley LW. Risk factors and costs associated with methicillin-resistant Staphylococcus aureus bloodstream infections. Infection Control and Hospital Epidemiology. 25: 425-30. PMID 15188850 DOI: 10.1086/502417  1
2004 Johnson JR, Owens K, Manges AR, Riley LW. Rapid and specific detection of Escherichia coli clonal group A by gene-specific PCR. Journal of Clinical Microbiology. 42: 2618-22. PMID 15184442 DOI: 10.1128/JCM.42.6.2618-2622.2004  1
2004 Lagally ET, Scherer JR, Blazej RG, Toriello NM, Diep BA, Ramchandani M, Sensabaugh GF, Riley LW, Mathies RA. Integrated portable genetic analysis microsystem for pathogen/infectious disease detection. Analytical Chemistry. 76: 3162-70. PMID 15167797 DOI: 10.1021/ac035310p  1
2004 Woodruff PJ, Carlson BL, Siridechadilok B, Pratt MR, Senaratne RH, Mougous JD, Riley LW, Williams SJ, Bertozzi CR. Trehalose is required for growth of Mycobacterium smegmatis. The Journal of Biological Chemistry. 279: 28835-43. PMID 15102847 DOI: 10.1074/jbc.M313103200  1
2004 Pai M, Flores LL, Hubbard A, Riley LW, Colford JM. Nucleic acid amplification tests in the diagnosis of tuberculous pleuritis: a systematic review and meta-analysis. Bmc Infectious Diseases. 4: 6. PMID 15102325 DOI: 10.1186/1471-2334-4-6  1
2004 Krekulová L, Řehák V, Killoran P, Zavoral M, Riley LW. Distribution of HBV Genotypes in Czech Population - A Pilot Study | Distribuce Genotypů HBV v České Populaci - Pilotní Studie Vnitrni Lekarstvi. 50: 106-111. PMID 15077584  1
2004 Manges AR, Dietrich PS, Riley LW. Multidrug-resistant Escherichia coli clonal groups causing community-acquired pyelonephritis. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 38: 329-34. PMID 14727201 DOI: 10.1086/380640  1
2004 Jayanthi U, Madhavan HN, Therese KL, Hadgu A, Sternberg M, Pai M, Flores LL, Pai N, Hubbard A, Riley LW, Colford JM. Nucleic acid amplification tests for diagnosis of tuberculous meningitis Lancet Infectious Diseases. 4: 9-12. PMID 14720559  1
2004 Schriefer A, Schriefer ALF, Góes-Neto A, Guimarães LH, Carvalho LP, Almeida RP, Machado PR, Lessa HA, Ribeiro De Jesus A, Riley LW, Carvalho EM. Multiclonal Leishmania braziliensis Population Structure and Its Clinical Implication in a Region of Endemicity for American Tegumentary Leishmaniasis Infection and Immunity. 72: 508-514. PMID 14688132 DOI: 10.1128/IAI.72.1.508-514.2004  1
2003 Shimono N, Morici L, Casali N, Cantrell S, Sidders B, Ehrt S, Riley LW. Hypervirulent mutant of Mycobacterium tuberculosis resulting from disruption of the mce1 operon. Proceedings of the National Academy of Sciences of the United States of America. 100: 15918-23. PMID 14663145 DOI: 10.1073/pnas.2433882100  1
2003 Schmidt MA, Riley LW, Benz I. Sweet new world: glycoproteins in bacterial pathogens. Trends in Microbiology. 11: 554-61. PMID 14659687 DOI: 10.1016/j.tim.2003.10.004  1
2003 Lu S, Killoran PB, Riley LW. Association of Salmonella enterica serovar enteritidis yafD with resistance to chicken egg albumen. Infection and Immunity. 71: 6734-41. PMID 14638758 DOI: 10.1128/IAI.71.12.6734-6741.2003  1
2003 Krekulova L, Rehak V, da Silva Filho HP, Zavoral M, Riley LW. Genotypic distribution of hepatitis B virus in the Czech Republic: a possible association with modes of transmission and clinical outcome. European Journal of Gastroenterology & Hepatology. 15: 1183-8. PMID 14560151 DOI: 10.1097/01.meg.0000085484.12407.cb  1
2003 Pai M, Flores LL, Pai N, Hubbard A, Riley LW, Colford JM. Diagnostic accuracy of nucleic acid amplification tests for tuberculous meningitis: a systematic review and meta-analysis. The Lancet. Infectious Diseases. 3: 633-43. PMID 14522262 DOI: 10.1016/S1473-3099(03)00772-2  1
2003 Matsunaga J, Barocchi MA, Croda J, Young TA, Sanchez Y, Siqueira I, Bolin CA, Reis MG, Riley LW, Haake DA, Ko AI. Pathogenic Leptospira species express surface-exposed proteins belonging to the bacterial immunoglobulin superfamily. Molecular Microbiology. 49: 929-45. PMID 12890019 DOI: 10.1046/j.1365-2958.2003.03619.x  1
2003 Miagostovich MP, Sequeira PC, Dos Santos FB, Maia A, Nogueira RM, Schatzmayr HG, Harris E, Riley LW. Molecular typing of dengue virus type 2 in Brazil. Revista Do Instituto De Medicina Tropical De SãO Paulo. 45: 17-21. PMID 12751317  1
2003 Pessoa-Silva CL, Meurer Moreira B, Câmara Almeida V, Flannery B, Almeida Lins MC, Mello Sampaio JL, Martins Teixeira L, Vaz Miranda LE, Riley LW, Gerberding JL. Extended-spectrum β-lactamase-producing Klebsiella pneumoniae in a neonatal intensive care unit: Risk factors for infection and colonization Journal of Hospital Infection. 53: 198-206. DOI: 10.1053/jhin.2002.1373  1
2002 Mougous JD, Leavell MD, Senaratne RH, Leigh CD, Williams SJ, Riley LW, Leary JA, Bertozzi CR. Discovery of sulfated metabolites in mycobacteria with a genetic and mass spectrometric approach. Proceedings of the National Academy of Sciences of the United States of America. 99: 17037-42. PMID 12482950 DOI: 10.1073/pnas.252514899  1
2002 dos Santos FB, Miagostovich MP, Nogueira RM, Edgil D, Schatzmayr HG, Riley LW, Harris E. Complete nucleotide sequence analysis of a Brazilian dengue virus type 2 strain. MemóRias Do Instituto Oswaldo Cruz. 97: 991-5. PMID 12471426  1
2002 Barocchi MA, Ko AI, Reis MG, McDonald KL, Riley LW. Rapid translocation of polarized MDCK cell monolayers by Leptospira interrogans, an invasive but nonintracellular pathogen. Infection and Immunity. 70: 6926-32. PMID 12438371 DOI: 10.1128/IAI.70.12.6926-6932.2002  1
2002 Casali N, Konieczny M, Schmidt MA, Riley LW. Invasion activity of a Mycobacterium tuberculosis peptide presented by the Escherichia coli AIDA autotransporter. Infection and Immunity. 70: 6846-52. PMID 12438361 DOI: 10.1128/IAI.70.12.6846-6852.2002  1
2002 Firmani MA, Riley LW. Reactive nitrogen intermediates have a bacteriostatic effect on Mycobacterium tuberculosis in vitro. Journal of Clinical Microbiology. 40: 3162-6. PMID 12202547 DOI: 10.1128/JCM.40.9.3162-3166.2002  1
2002 Sarkar U, Nascimento SF, Barbosa R, Martins R, Nuevo H, Kalofonos I, Kalafanos I, Grunstein I, Flannery B, Dias J, Riley LW, Reis MG, Ko AI. Population-based case-control investigation of risk factors for leptospirosis during an urban epidemic. The American Journal of Tropical Medicine and Hygiene. 66: 605-10. PMID 12201599  1
2002 Johnson JR, Manges AR, O'Bryan TT, Riley LW. A disseminated multidrug-resistant clonal group of uropathogenic Escherichia coli in pyelonephritis. Lancet (London, England). 359: 2249-51. PMID 12103291 DOI: 10.1016/S0140-6736(02)09264-4  1
2002 Pellegrino FL, Teixeira LM, Carvalho Md Mda G, Aranha Nouér S, Pinto De Oliveira M, Mello Sampaio JL, D'Avila Freitas A, Ferreira AL, Amorim Ed Ede L, Riley LW, Moreira BM. Occurrence of a multidrug-resistant Pseudomonas aeruginosa clone in different hospitals in Rio de Janeiro, Brazil. Journal of Clinical Microbiology. 40: 2420-4. PMID 12089256 DOI: 10.1128/JCM.40.7.2420-2424.2002  1
2002 Williams SJ, Senaratne RH, Mougous JD, Riley LW, Bertozzi CR. 5'-adenosinephosphosulfate lies at a metabolic branch point in mycobacteria. The Journal of Biological Chemistry. 277: 32606-15. PMID 12072441 DOI: 10.1074/jbc.M204613200  1
2002 Firmani MA, Riley LW. Mycobacterium tuberculosis CDC1551 is resistant to reactive nitrogen and oxygen intermediates in vitro. Infection and Immunity. 70: 3965-8. PMID 12065545 DOI: 10.1128/IAI.70.7.3965-3968.2002  1
2002 Sandel DC, Wang CT, Kessler S, Petrof EO, Schwartz DN, Quinn JP, Barlam T, Moellering R, Johnson JR, Manges AR, Riley LW. Urinary tract infections and a multidrug-Resistant Escherichia coli clonal group [2] (multiple letters) New England Journal of Medicine. 346: 535-536. PMID 11858221 DOI: 10.1056/NEJM200202143460717  1
2002 Lu S, Killoran PB, Fang FC, Riley LW. The global regulator ArcA controls resistance to reactive nitrogen and oxygen intermediates in Salmonella enterica serovar Enteritidis. Infection and Immunity. 70: 451-61. PMID 11796570 DOI: 10.1128/IAI.70.2.451-461.2002  1
2002 Leavell MD, Mougous JD, Senaratne RH, Leigh C, Williams SJ, Riley L, Bertozzi CR, Leary JA. Strategy for the identification of sulfated metabolites in bacterial cell extracts using FT-ICR, isotopic labeling and genetics Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 415-416.  1
2001 Magnani J, Mathema B, Berger J, Brown S, David M, Glatt A, Pujol F, Segal-Maurer S, Riley LW, Kreiswirth BN, Sepkowitz KA. Molecular epidemiology of tuberculosis among eight hospitals in New York City, 1996-1997 International Journal of Infectious Diseases. 5: 126-132. PMID 11724668 DOI: 10.1016/S1201-9712(01)90086-4  1
2001 Flannery B, Pereira MM, De Freitas Velloso PL, De Castro Carvalho C, De Codes LG, De Saboia Orrico G, Ribeiro Dourado CM, Riley LW, Reis MG, Ko AI. Referral pattern of Leptospirosis cases during a large urban epidemic of dengue American Journal of Tropical Medicine and Hygiene. 65: 657-663. PMID 11716133  1
2001 Kaps I, Ehrt S, Seeber S, Schnappinger D, Martin C, Riley LW, Niederweis M. Energy transfer between fluorescent proteins using a co-expression system in Mycobacterium smegmatis Gene. 278: 115-124. PMID 11707328 DOI: 10.1016/S0378-1119(01)00712-0  1
2001 Krekulova L, Rehak V, Killoran P, Madrigal N, Riley LW. Genotypic distribution of TT virus (TTV) in a Czech population: Evidence for sexual transmission of the virus Journal of Clinical Virology. 23: 31-41. PMID 11595582 DOI: 10.1016/S1386-6532(01)00185-8  1
2001 Manges AR, Johnson JR, Foxman B, O'Bryan TT, Fullerton KE, Riley LW. Widespread distribution of urinary tract infections caused by a multidrug-resistant Escherichia coli clonal group. The New England Journal of Medicine. 345: 1007-13. PMID 11586952 DOI: 10.1056/NEJMoa011265  1
2001 Krekulova L, Rehak V, Madrigal N, Johnson M, Killoran P, Riley LW. Genotypic and epidemiologic characteristics of hepatitis C virus infections among recent injection drug user and nonuser populations Clinical Infectious Diseases. 33: 1435-1438. PMID 11565087 DOI: 10.1086/323199  1
2001 Flannery B, Costa D, Carvalho FP, Guerreiro H, Matsunaga J, Da Silva ED, Ferreira AG, Riley LW, Reis MG, Haake DA, Ko AI. Evaluation of recombinant Leptospira antigen-based enzyme-linked immunosorbent assays for the serodiagnosis of leptospirosis. Journal of Clinical Microbiology. 39: 3303-10. PMID 11526167 DOI: 10.1128/JCM.39.9.3303-3310.2001  1
2001 Webb M, Riley LW, Roberts RB. Cost of hospitalization for and risk factors associated with vancomycin-resistant Enterococcus faecium infection and colonization. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 33: 445-52. PMID 11462178 DOI: 10.1086/321891  1
2001 Xet-Mull AM, Kubín M, Príkazský V, Harris EH, Riley LW. DRE-PCR (Double Repetitive Element-Polymerase Chain Reaction) - A new molecular epidemiological method in tuberculosis Epidemiologie, Mikrobiologie, Imunologie. 50: 82-86. PMID 11329732  1
2001 Krekulova L, Rehak V, Wakil AE, Harris E, Riley LW. Nested restriction site-specific PCR to detect and type hepatitis C virus (HCV): A rapid method to distinguish HCV subtype 1b from other genotypes Journal of Clinical Microbiology. 39: 1774-1780. PMID 11325989 DOI: 10.1128/JCM.39.5.1774-1780.2001  1
2001 Chitale S, Ehrt S, Kawamura I, Fujimura T, Shimono N, Anand N, Lu S, Cohen-Gould L, Riley LW. Recombinant Mycobacterium tuberculosis protein associated with mammalian cell entry Cellular Microbiology. 3: 247-254. PMID 11298648 DOI: 10.1046/j.1462-5822.2001.00110.x  1
2001 Barocchi MA, Ko AI, Ferrer SR, Faria MT, Reis MG, Riley LW. Identification of new repetitive element in Leptospira interrogans serovar copenhageni and its application to PCR-based differentiation of Leptospira serogroups. Journal of Clinical Microbiology. 39: 191-5. PMID 11136769 DOI: 10.1128/JCM.39.1.191-195.2001  1
2000 Stewart GR, Ehrt S, Riley LW, Dale JW, McFadden J. Deletion of the putative antioxidant noxR1 does not alter the virulence of Mycobacterium tuberculosis H37Rv Tubercle and Lung Disease. 80: 237-242. PMID 11052913 DOI: 10.1054/tuld.2000.0251  1
2000 Saad MHF, Telles MA, Porfirio F, Ferrazoli L, De Souza Fonseca L, Johnson W, Riley LW. Multiple Isolates from Aids Patients: Aspects of an Analysis by a Genotypic Marker and Antimicrobial Susceptibilities Variations Memorias Do Instituto Oswaldo Cruz. 95: 729-732. PMID 10998225  1
2000 Fandinho FCO, Kritski AL, Hofer C, Conde H, Ferreira RMC, Saad MHF, Silva MG, Riley LW, Fonseca LS. RFLP patterns and risk factors for recent tuberculosis transmission among hospitalized tuberculosis patients in Rio de Janeiro, Brazil Transactions of the Royal Society of Tropical Medicine and Hygiene. 94: 271-275. PMID 10974996  1
2000 Kimura R, Mandrell RE, Galland JC, Hyatt D, Riley LW. Restriction-site-specific PCR as a rapid test to detect enterohemorrhagic Escherichia coli O157:H7 strains in environmental samples Applied and Environmental Microbiology. 66: 2513-2519. PMID 10831431 DOI: 10.1128/AEM.66.6.2513-2519.2000  1
2000 Miagostovich MP, dos Santos FB, Gutiérrez CM, Riley LW, Harris E. Rapid subtyping of dengue virus serotypes 1 and 4 by restriction site-specific PCR. Journal of Clinical Microbiology. 38: 1286-9. PMID 10699044  1
2000 Ferrazoli L, Palaci M, Marques LRM, Jamal LF, Afiune JB, Chimara E, Martins MC, Da Silva Telles MA, Oliveira CAF, Palhares MC, Spada DTA, Riley LW. Transmission of tuberculosis in an endemic urban setting in Brazil International Journal of Tuberculosis and Lung Disease. 4: 18-25. PMID 10654639  1
2000 Ko AI, Reis JN, Coppola SJ, Gouveia EL, Cordeiro SM, Lôbo TS, Pinheiro RM, Salgado K, Dourado CMR, Tavares-Neto J, Rocha H, Reis MG, Johnson WD, Riley LW. Clonally related penicillin-nonsusceptible Streptococcus pneumoniae serotype 14 from cases of meningitis in Salvador, Brazil Clinical Infectious Diseases. 30: 78-86. PMID 10619737 DOI: 10.1086/313619  1
1999 Saad MHF, De Fonseca LS, Ferrazoli L, Fandinho F, Palaci M, Grinsztejn B, Kritski A, Werneck A, Poltoratskaia N, Johnson WD, Riley LW. IS1245 genotypic analysis of Mycobacterium avium isolates from patients in Brazil International Journal of Infectious Diseases. 3: 192-196. PMID 10575147  1
1999 Lu S, Manges AR, Xu Y, Fang FC, Riley LW. Analysis of virulence of clinical isolates of Salmonella enteritidis in vivo and in vitro. Infection and Immunity. 67: 5651-7. PMID 10531212  1
1999 Ko AI, Galvão Reis M, Ribeiro Dourado CM, Johnson WD, Riley LW. Urban epidemic of severe leptospirosis in Brazil Lancet. 354: 820-825. PMID 10485724 DOI: 10.1016/S0140-6736(99)80012-9  1
1999 Niederweis M, Ehrt S, Heinz C, Klöcker U, Karosi S, Swiderek KM, Riley LW, Benz R. Cloning of the mspA gene encoding a porin from Mycobacterium smegmatis Molecular Microbiology. 33: 933-945. PMID 10476028 DOI: 10.1046/j.1365-2958.1999.01472.x  1
1999 Kremer K, van Soolingen D, Frothingham R, Haas WH, Hermans PW, Martín C, Palittapongarnpim P, Plikaytis BB, Riley LW, Yakrus MA, Musser JM, van Embden JD. Comparison of methods based on different molecular epidemiological markers for typing of Mycobacterium tuberculosis complex strains: interlaboratory study of discriminatory power and reproducibility. Journal of Clinical Microbiology. 37: 2607-18. PMID 10405410  1
1999 Schriefer A, Maltez JR, Silva N, Stoeckle MY, Barral-Netto M, Riley LW. Expression of a pilin subunit BfpA of the bundle-forming pilus of enteropathogenic Escherichia coli in an aroA live salmonella vaccine strain Vaccine. 17: 770-778. PMID 10067682 DOI: 10.1016/S0264-410X(98)00261-8  1
1999 Harris E, Sandoval E, Xet-Mull AM, Johnson M, Riley LW. Rapid subtyping of dengue viruses by restriction site-specific (RSS)-PCR Virology. 253: 86-95. PMID 9887321 DOI: 10.1006/viro.1998.9481  1
1998 Munsiff SS, Driver C, Friedman CR, Quinn GC, Kreiswirth BN, Perlman DC, Salomon N, Schluger N, Lutfey M, Berger J, Poltoratskaia N, Riley LW. Drug-susceptible tuberculosis [2] (multiple letters) Journal of Infectious Diseases. 177: 1138. PMID 9535002  1
1998 Kubín M, Riley LW, Havelková M, Poltoratskaia N, Kočová A. Molecular epidemiology of tuberculosis in Prague: Analysis by restriction fragment length polymorphism International Journal of Infectious Diseases. 2: 155-158. PMID 9531663 DOI: 10.1016/S1201-9712(98)90119-9  1
1997 Tornieporth NG, Ptachewich Y, Poltoratskaia N, Ravi BS, Katapadi M, Berger JJ, Dahdouh M, Segal-Maurer S, Glatt A, Adamis R, Lerner C, Armstrong D, Weiner M, D'Amato R, Kiehn T, ... ... Riley LW, et al. Tuberculosis among foreign-born persons in New York City, 1992-1994: implications for tuberculosis control. The International Journal of Tuberculosis and Lung Disease : the Official Journal of the International Union Against Tuberculosis and Lung Disease. 1: 528-35. PMID 9487451  1
1997 Mannheimer SB, Sepkowitz KA, Stoeckle M, Friedman CR, Hafner A, Riley LW. Risk factors and outcome of human immunodeficiency virus-infected patients with sporadic multidrug-resistant tuberculosis in New York City International Journal of Tuberculosis and Lung Disease. 1: 319-325. PMID 9432387  1
1997 Ehrt S, Shiloh MU, Ruan J, Choi M, Gunzburg S, Nathan C, Xie Q, Riley LW. A novel antioxidant gene from Mycobacterium tuberculosis. The Journal of Experimental Medicine. 186: 1885-96. PMID 9382887 DOI: 10.1084/jem.186.11.1885  1
1996 Riley LW. Risk factors associated with vancomycin-resistant Enterococcus faecium infection or colonization in 145 matched case patients and control patients Clinical Infectious Diseases. 23: 767-772. PMID 8909842 DOI: 10.1093/clinids/23.4.767  1
1987 Riley LW. The epidemiologic, clinical, and microbiologic features of hemorrhagic colitis Annual Review of Microbiology. 41: 383-407. PMID 3318674 DOI: 10.1146/annurev.mi.41.100187.002123  1
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