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Karin Dorman - Publications

Affiliations: 
Genetics, Development and Cell Biology Iowa State University, Ames, IA, United States 
Area:
Bioinformatics Biology, Evolution and Development Biology, Genetics
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30 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Schwartz EJ, Vaidya NK, Dorman KS, Carpenter S, Mealey RH. Dynamics of lentiviral infection in vivo in the absence of adaptive immune responses. Virology. 513: 108-113. PMID 29055819 DOI: 10.1016/J.Virol.2017.09.023  0.363
2017 Evans AB, Loyd H, Dunkelberger JR, van Tol S, Bolton MJ, Dorman KS, Dekkers JCM, Carpenter S. Antigenic and Biological Characterization of ORF2-6 Variants at Early Times Following PRRSV Infection. Viruses. 9. PMID 28509878 DOI: 10.3390/v9050113  0.361
2013 Towfic G, Graziano F, Towfic F, Dorman K, Cook D, Kettoola S, Neal L. HIV dynamics impacting the efficacy of HIV/AIDS treatments Journal of Proteomics and Bioinformatics. 6: 51-57. DOI: 10.4172/Jpb.1000261  0.329
2011 Carpenter S, Chen WC, Dorman KS. Rev variation during persistent lentivirus infection. Viruses. 3: 1-11. PMID 21994723 DOI: 10.3390/v3010001  0.344
2011 Bogdanove AJ, Koebnik R, Lu H, Furutani A, Angiuoli SV, Patil PB, Van Sluys MA, Ryan RP, Meyer DF, Han SW, Aparna G, Rajaram M, Delcher AL, Phillippy AM, Puiu D, ... ... Dorman KS, et al. Two new complete genome sequences offer insight into host and tissue specificity of plant pathogenic Xanthomonas spp. Journal of Bacteriology. 193: 5450-64. PMID 21784931 DOI: 10.1128/Jb.05262-11  0.523
2011 Wu W, Blythe DC, Loyd H, Mealey RH, Tallmadge RL, Dorman KS, Carpenter S. Decreased infectivity of a neutralization-resistant equine infectious anemia virus variant can be overcome by efficient cell-to-cell spread. Journal of Virology. 85: 10421-4. PMID 21752904 DOI: 10.1128/Jvi.05349-11  0.53
2010 Farfan-Ale JA, Loroño-Pino MA, Garcia-Rejon JE, Soto V, Lin M, Staley M, Dorman KS, Bartholomay LC, Hovav E, Blitvich BJ. Detection of flaviviruses and orthobunyaviruses in mosquitoes in the Yucatan Peninsula of Mexico in 2008. Vector Borne and Zoonotic Diseases (Larchmont, N.Y.). 10: 777-83. PMID 20370430 DOI: 10.1089/Vbz.2009.0196  0.318
2010 Dancik GM, Jones DE, Dorman KS. Parameter estimation and sensitivity analysis in an agent-based model of Leishmania major infection. Journal of Theoretical Biology. 262: 398-412. PMID 19837088 DOI: 10.1016/J.Jtbi.2009.10.007  0.671
2009 Farfan-Ale JA, Loroño-Pino MA, Garcia-Rejon JE, Hovav E, Powers AM, Lin M, Dorman KS, Platt KB, Bartholomay LC, Soto V, Beaty BJ, Lanciotti RS, Blitvich BJ. Detection of RNA from a novel West Nile-like virus and high prevalence of an insect-specific flavivirus in mosquitoes in the Yucatan Peninsula of Mexico. The American Journal of Tropical Medicine and Hygiene. 80: 85-95. PMID 19141845 DOI: 10.4269/Ajtmh.2009.80.85  0.312
2009 Bloomquist EW, Dorman KS, Suchard MA. StepBrothers: inferring partially shared ancestries among recombinant viral sequences. Biostatistics (Oxford, England). 10: 106-20. PMID 18562348 DOI: 10.1093/Biostatistics/Kxn019  0.517
2008 Dancik GM, Dorman KS. mlegp: statistical analysis for computer models of biological systems using R. Bioinformatics (Oxford, England). 24: 1966-7. PMID 18635570 DOI: 10.1093/Bioinformatics/Btn329  0.618
2007 Ahmed KA, Saxena VK, Saxena M, Ara A, Pramod AB, Rajaram ML, Dorman KS, Majumdar S, Rasool TJ. Molecular cloning and sequencing of MHC class II beta 1 domain of turkey reveals high sequence identity with chicken. International Journal of Immunogenetics. 34: 97-105. PMID 17373934 DOI: 10.1111/j.1744-313X.2007.00661.x  0.491
2007 Minin VN, Dorman KS, Fang F, Suchard MA. Phylogenetic mapping of recombination hotspots in human immunodeficiency virus via spatially smoothed change-point processes. Genetics. 175: 1773-85. PMID 17194781 DOI: 10.1534/Genetics.106.066258  0.524
2007 Fang F, Ding J, Minin VN, Suchard MA, Dorman KS. cBrother: relaxing parental tree assumptions for Bayesian recombination detection. Bioinformatics (Oxford, England). 23: 507-8. PMID 17145740 DOI: 10.1093/Bioinformatics/Btl613  0.439
2007 Rajaram ML, Minin VN, Suchard MA, Dorman KS. Hot and cold: Spatial fluctuation in HIV-1 recombination rates Proceedings of the 7th Ieee International Conference On Bioinformatics and Bioengineering, Bibe. 707-714. DOI: 10.1109/BIBE.2007.4375638  0.669
2005 Minin VN, Dorman KS, Fang F, Suchard MA. Dual multiple change-point model leads to more accurate recombination detection. Bioinformatics (Oxford, England). 21: 3034-42. PMID 15914546 DOI: 10.1093/Bioinformatics/Bti459  0.498
2004 Dorman KS, Sinsheimer JS, Lange K. In the garden of branching processes Siam Review. 46: 202-229. DOI: 10.1137/S0036144502417843  0.53
2003 Sinsheimer JS, Suchard MA, Dorman KS, Fang F, Weiss RE. Are you my mother? Bayesian phylogenetic inference of recombination among putative parental strains. Applied Bioinformatics. 2: 131-44. PMID 15130798  0.613
2003 Baccam P, Thompson RJ, Li Y, Sparks WO, Belshan M, Dorman KS, Wannemuehler Y, Oaks JL, Cornette JL, Carpenter S. Subpopulations of equine infectious anemia virus Rev coexist in vivo and differ in phenotype. Journal of Virology. 77: 12122-31. PMID 14581549 DOI: 10.1128/Jvi.77.22.12122-12131.2003  0.361
2003 Suchard MA, Weiss RE, Dorman KS, Sinsheimer JS. Inferring spatial phylogenetic variation along nucleotide sequences: A multiple changepoint model Journal of the American Statistical Association. 98: 427-437. DOI: 10.1198/016214503000215  0.677
2003 Suchard MA, Weiss RE, Sinsheimer JS, Dorman KS, Patel M, McCabe ERB. Evolutionary Similarity Among Genes Journal of the American Statistical Association. 98: 653-662. DOI: 10.1198/016214503000000558  0.579
2002 Suchard MA, Weiss RE, Dorman KS, Sinsheimer JS. Oh brother, where art thou? A Bayes factor test for recombination with uncertain heritage. Systematic Biology. 51: 715-28. PMID 12396586 DOI: 10.1080/10635150290102384  0.664
2002 Dorman KS, Kaplan AH, Sinsheimer JS. Bootstrap confidence levels for HIV-1 recombination. Journal of Molecular Evolution. 54: 200-9. PMID 11821913 DOI: 10.1007/S00239-001-0002-4  0.544
2001 Patel M, Dorman KS, Zhang YH, Huang BL, Arnold AP, Sinsheimer JS, Vilain E, McCabe ER. Primate DAX1, SRY, and SOX9: evolutionary stratification of sex-determination pathway. American Journal of Human Genetics. 68: 275-80. PMID 11112659 DOI: 10.1086/316932  0.484
2000 Dorman KS, Kaplan AH, Lange K, Sinsheimer JS. Mutation takes no vacation: Can structured treatment interruptions increase the risk of drug-resistant HIV-1? Journal of Acquired Immune Deficiency Syndromes. 25: 398-402. PMID 11141239 DOI: 10.1097/00042560-200012150-00003  0.58
1999 Pérez C C, Vial C P, Dorman KS, Wang G, Abarca V K, Sinsheimer JS, Kaplan AH. Molecular epidemiology of the human immunodeficiency virus tipe 1 in Santiago, Chile | Epidemiología molecular del virus de inmunodeficiencia humana tipo 1 en Santiago, Chile Revista Medica De Chile. 127: 1294-1304. PMID 10835715  0.591
1999 Pérez C C, Vial C P, Dorman KS, Wang G, Wang G, Abarca V K, Sinsheimer JS, Kaplan AH. Epidemiología molecular del virus de inmunodeficiencia humana tipo 1 en Santiago, Chile Revista MéDica De Chile. 127. DOI: 10.4067/S0034-98871999001100002  0.625
1996 Panda S, Wang G, Sarkar S, Perez CM, Chakraborty S, Agarwal A, Dorman K, Sarkar K, Detels R, Kaplan AH. Characterization of V3 loop of HIV type 1 spreading rapidly among injection drag users of Manipur, India: A molecular epidemiological perspective Aids Research and Human Retroviruses. 12: 1571-1573. PMID 8911584 DOI: 10.1089/Aid.1996.12.1571  0.423
1996 Yan Li Yang, Wang G, Dorman K, Kaplan AH. Long polymerase chain reaction amplification of heterogeneous HIV type 1 templates produces recombination at a relatively high frequency Aids Research and Human Retroviruses. 12: 303-306. PMID 8906990 DOI: 10.1089/Aid.1996.12.303  0.398
1996 Lech WJ, Wang G, Yang YL, Chee Y, Dorman K, Mccrae D, Lazzeroni LC, Erickson JW, Sinsheimer JS, Kaplan AH. In vivo sequence diversity of the protease of human immunodeficiency virus type 1: Presence of protease inhibitor-resistant variants in untreated subjects Journal of Virology. 70: 2038-2043. PMID 8627733 DOI: 10.1128/Jvi.70.3.2038-2043.1996  0.607
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