| Year |
Citation |
Score |
| 2021 |
Shariat N, Dudley E. CRISPR Typing of Salmonella Isolates. Methods of Molecular Biology. 2182: 39-44. PMID 32894485 DOI: 10.1007/978-1-0716-0791-6_5 |
0.313 |
|
| 2020 |
Nawrocki EM, Mosso HM, Dudley EG. A toxic environment: a growing understanding of how microbial communities affect Shiga toxin expression by O157:H7. Applied and Environmental Microbiology. PMID 32358004 DOI: 10.1128/Aem.00509-20 |
0.327 |
|
| 2019 |
Eyler AB, M'ikanatha NM, Xiaoli L, Dudley EG. Whole-genome sequencing reveals resistome of highly drug-resistant retail meat and human Salmonella Dublin. Zoonoses and Public Health. PMID 31867871 DOI: 10.1111/Zph.12680 |
0.318 |
|
| 2019 |
Figler HM, Xiaoli L, Banerjee K, Hoffmann M, Yao K, Dudley EG. A putative microcin amplifies Shiga toxin 2a production of O157:H7. Journal of Bacteriology. PMID 31611289 DOI: 10.1128/Jb.00353-19 |
0.351 |
|
| 2019 |
Keefer AB, Xiaoli L, M'ikanatha NM, Yao K, Hoffmann M, Dudley EG. Retrospective whole-genome sequencing analysis distinguished PFGE and drug-resistance-matched retail meat and clinical Salmonella isolates. Microbiology (Reading, England). PMID 30672732 DOI: 10.1099/Mic.0.000768 |
0.344 |
|
| 2018 |
Xiaoli L, Figler HM, Goswami Banerjee K, Hayes CS, Dudley EG. Non-pathogenic Enhance Stx2a Production of O157:H7 Through Both -Dependent and Independent Mechanisms. Frontiers in Microbiology. 9: 1325. PMID 29973923 DOI: 10.3389/Fmicb.2018.01325 |
0.344 |
|
| 2017 |
Yang X, Huang E, Yesil M, Xiaoli L, Dudley EG, Yousef AE. Draft Genome Sequence of Brevibacillus laterosporus OSY-I1, a Strain That Produces Brevibacillin, Which Combats Drug-Resistant Gram-Positive Bacteria. Genome Announcements. 5. PMID 29025947 DOI: 10.1128/Genomea.01093-17 |
0.328 |
|
| 2017 |
Gerst MM, Dudley EG, Xiaoli L, Yousef AE. Draft Genome Sequence of Bacillus velezensis GF610, a Producer of Potent Anti-Listeria Agents. Genome Announcements. 5. PMID 29025938 DOI: 10.1128/Genomea.01046-17 |
0.326 |
|
| 2017 |
DiMarzio M, Rusconi B, Yennawar NH, Eppinger M, Patterson AD, Dudley EG. Identification of a mouse Lactobacillus johnsonii strain with deconjugase activity against the FXR antagonist T-β-MCA. Plos One. 12: e0183564. PMID 28910295 DOI: 10.1371/Journal.Pone.0183564 |
0.311 |
|
| 2017 |
Uhlich GA, Paoli GC, Zhang X, Dudley EG, Figler HM, Cottrell BJ, Andreozzi E. Whole-Genome Sequence of Escherichia coli Serotype O157:H7 Strain PA20. Genome Announcements. 5. PMID 28082498 DOI: 10.1128/Genomea.01460-16 |
0.342 |
|
| 2016 |
Figler HM, Dudley EG. The interplay of Escherichia coli O157:H7 and commensal E. coli: the importance of strain-level identification. Expert Review of Gastroenterology & Hepatology. PMID 26885676 DOI: 10.1586/17474124.2016.1155449 |
0.316 |
|
| 2016 |
Barrangou R, Dudley EG. CRISPR-Based Typing and Next-Generation Tracking Technologies. Annual Review of Food Science and Technology. PMID 26772411 DOI: 10.1146/Annurev-Food-022814-015729 |
0.319 |
|
| 2016 |
Very KJ, Kirchner MK, Shariat N, Cottrell W, Sandt CH, Dudley EG, Kariyawasam S, Jayarao BM. Prevalence and Spatial Distribution of Salmonella Infections in the Pennsylvania Raccoon (Procyon lotor). Zoonoses and Public Health. 63: 223-33. PMID 26272724 DOI: 10.1111/Zph.12222 |
0.308 |
|
| 2015 |
Park J, Zhang Y, Chen C, Dudley EG, Harvill ET. Diversity of secretion systems associated with virulence characteristics of the classical bordetellae. Microbiology (Reading, England). 161: 2328-40. PMID 26459829 DOI: 10.1099/Mic.0.000197 |
0.337 |
|
| 2015 |
Yin S, Rusconi B, Sanjar F, Goswami K, Xiaoli L, Eppinger M, Dudley EG. Escherichia coli O157:H7 strains harbor at least three distinct sequence types of Shiga toxin 2a-converting phages. Bmc Genomics. 16: 733. PMID 26416807 DOI: 10.1186/S12864-015-1934-1 |
0.35 |
|
| 2015 |
Goswami K, Chen C, Xiaoli L, Eaton KA, Dudley EG. Co-culturing Escherichia coli O157:H7 with a non-pathogenic E. coli strain increases toxin production and virulence in a germ-free mouse model. Infection and Immunity. PMID 26259815 DOI: 10.1128/Iai.00663-15 |
0.333 |
|
| 2015 |
Jiang Y, Yin S, Dudley EG, Cutter CN. Diversity of CRISPR loci and virulence genes in pathogenic Escherichia coli isolates from various sources. International Journal of Food Microbiology. 204: 41-6. PMID 25839984 DOI: 10.1016/J.Ijfoodmicro.2015.03.025 |
0.304 |
|
| 2015 |
Deng X, Shariat N, Driebe EM, Roe CC, Tolar B, Trees E, Keim P, Zhang W, Dudley EG, Fields PI, Engelthaler DM. Comparative analysis of subtyping methods against a whole-genome-sequencing standard for Salmonella enterica serotype Enteritidis. Journal of Clinical Microbiology. 53: 212-8. PMID 25378576 DOI: 10.1128/Jcm.02332-14 |
0.327 |
|
| 2014 |
Wijetunge DS, Karunathilake KH, Chaudhari A, Katani R, Dudley EG, Kapur V, DebRoy C, Kariyawasam S. Complete nucleotide sequence of pRS218, a large virulence plasmid, that augments pathogenic potential of meningitis-associated Escherichia coli strain RS218. Bmc Microbiology. 14: 203. PMID 25164788 DOI: 10.1186/S12866-014-0203-9 |
0.347 |
|
| 2014 |
Sanjar F, Hazen TH, Shah SM, Koenig SS, Agrawal S, Daugherty S, Sadzewicz L, Tallon LJ, Mammel MK, Feng P, Soderlund R, Tarr PI, Debroy C, Dudley EG, Cebula TA, et al. Genome Sequence of Escherichia coli O157:H7 Strain 2886-75, Associated with the First Reported Case of Human Infection in the United States. Genome Announcements. 2. PMID 24407635 DOI: 10.1128/Genomea.01120-13 |
0.346 |
|
| 2014 |
Shariat N, Dudley EG. CRISPRs: molecular signatures used for pathogen subtyping. Applied and Environmental Microbiology. 80: 430-9. PMID 24162568 DOI: 10.1128/Aem.02790-13 |
0.342 |
|
| 2013 |
Shariat N, Sandt CH, DiMarzio MJ, Barrangou R, Dudley EG. CRISPR-MVLST subtyping of Salmonella enterica subsp. enterica serovars Typhimurium and Heidelberg and application in identifying outbreak isolates. Bmc Microbiology. 13: 254. PMID 24219629 DOI: 10.1186/1471-2180-13-254 |
0.324 |
|
| 2013 |
Loquasto JR, Barrangou R, Dudley EG, Stahl B, Chen C, Roberts RF. Bifidobacterium animalis subsp. lactis ATCC 27673 is a genomically unique strain within its conserved subspecies. Applied and Environmental Microbiology. 79: 6903-10. PMID 23995933 DOI: 10.1128/Aem.01777-13 |
0.35 |
|
| 2013 |
Yin S, Jensen MA, Bai J, Debroy C, Barrangou R, Dudley EG. The evolutionary divergence of Shiga toxin-producing Escherichia coli is reflected in clustered regularly interspaced short palindromic repeat (CRISPR) spacer composition. Applied and Environmental Microbiology. 79: 5710-20. PMID 23851088 DOI: 10.1128/Aem.00950-13 |
0.305 |
|
| 2013 |
Dimarzio M, Shariat N, Kariyawasam S, Barrangou R, Dudley EG. Antibiotic resistance in Salmonella Typhimurium associates with CRISPR sequence type. Antimicrobial Agents and Chemotherapy. PMID 23796925 DOI: 10.1128/Aac.00913-13 |
0.327 |
|
| 2013 |
Chen C, Blumentritt CA, Curtis MM, Sperandio V, Torres AG, Dudley EG. Restrictive streptomycin-resistant mutations decrease the formation of attaching and effacing lesions in Escherichia coli O157:H7 strains. Antimicrobial Agents and Chemotherapy. PMID 23796920 DOI: 10.1128/Aac.00709-13 |
0.312 |
|
| 2013 |
Uhlich GA, Chen CY, Cottrell BJ, Hofmann CS, Dudley EG, Strobaugh TP, Nguyen LH. Phage insertion in mlrA and variations in rpoS limit curli expression and biofilm formation in Escherichia coli serotype O157: H7. Microbiology (Reading, England). 159: 1586-96. PMID 23744902 DOI: 10.1099/Mic.0.066118-0 |
0.34 |
|
| 2013 |
Shariat N, Kirchner MK, Sandt CH, Trees E, Barrangou R, Dudley EG. Subtyping of Salmonella enterica serovar Newport outbreak isolates by CRISPR-MVLST and determination of the relationship between CRISPR-MVLST and PFGE results. Journal of Clinical Microbiology. 51: 2328-36. PMID 23678062 DOI: 10.1128/Jcm.00608-13 |
0.338 |
|
| 2013 |
Eppinger M, Daugherty S, Agrawal S, Galens K, Sengamalay N, Sadzewicz L, Tallon L, Cebula TA, Mammel MK, Feng P, Soderlund R, Tarr PI, Debroy C, Dudley EG, Fraser CM, et al. Whole-Genome Draft Sequences of 26 Enterohemorrhagic Escherichia coli O157:H7 Strains. Genome Announcements. 1: e0013412. PMID 23516226 DOI: 10.1128/Genomea.00134-12 |
0.344 |
|
| 2013 |
Shariat N, DiMarzio MJ, Yin S, Dettinger L, Sandt CH, Lute JR, Barrangou R, Dudley EG. The combination of CRISPR-MVLST and PFGE provides increased discriminatory power for differentiating human clinical isolates of Salmonella enterica subsp. enterica serovar Enteritidis. Food Microbiology. 34: 164-73. PMID 23498194 DOI: 10.1016/J.Fm.2012.11.012 |
0.363 |
|
| 2013 |
Chen C, Lewis CR, Goswami K, Roberts EL, DebRoy C, Dudley EG. Identification and characterization of spontaneous deletions within the Sp11-Sp12 prophage region of Escherichia coli O157:H7 Sakai. Applied and Environmental Microbiology. 79: 1934-41. PMID 23315730 DOI: 10.1128/Aem.03682-12 |
0.314 |
|
| 2013 |
Dudley EG, Steele JL. Dipeptidase DA Handbook of Proteolytic Enzymes. 3: 3657-3659. DOI: 10.1016/B978-0-12-382219-2.00810-3 |
0.357 |
|
| 2012 |
Verghese B, Schwalm ND, Dudley EG, Knabel SJ. A combined multi-virulence-locus sequence typing and Staphylococcal Cassette Chromosome mec typing scheme possesses enhanced discriminatory power for genotyping MRSA. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. 12: 1816-21. PMID 22948087 DOI: 10.1016/J.Meegid.2012.07.026 |
0.338 |
|
| 2012 |
Miller DM, Dudley EG, Roberts RF. Technical note: development of a quantitative PCR method for monitoring strain dynamics during yogurt manufacture. Journal of Dairy Science. 95: 4868-72. PMID 22916891 DOI: 10.3168/Jds.2012-5445 |
0.318 |
|
| 2011 |
Loquasto JR, Barrangou R, Dudley EG, Roberts RF. Short communication: The complete genome sequence of Bifidobacterium animalis subspecies animalis ATCC 25527 T and comparative analysis of growth in milk with B. animalis subspecies lactis DSM 10140 T Journal of Dairy Science. 94: 5864-5870. PMID 22118077 DOI: 10.3168/Jds.2011-4499 |
0.31 |
|
| 2011 |
Liu F, Kariyawasam S, Jayarao BM, Barrangou R, Gerner-Smidt P, Ribot EM, Knabel SJ, Dudley EG. Subtyping Salmonella enterica serovar enteritidis isolates from different sources by using sequence typing based on virulence genes and clustered regularly interspaced short palindromic repeats (CRISPRs). Applied and Environmental Microbiology. 77: 4520-6. PMID 21571881 DOI: 10.1128/Aem.00468-11 |
0.343 |
|
| 2011 |
Hartzell A, Chen C, Lewis C, Liu K, Reynolds S, Dudley EG. Escherichia coli O157:H7 of genotype lineage-specific polymorphism assay 211111 and clade 8 are common clinical isolates within Pennsylvania. Foodborne Pathogens and Disease. 8: 763-8. PMID 21438760 DOI: 10.1089/Fpd.2010.0762 |
0.324 |
|
| 2011 |
Liu F, Barrangou R, Gerner-Smidt P, Ribot EM, Knabel SJ, Dudley EG. Novel virulence gene and clustered regularly interspaced short palindromic repeat (CRISPR) multilocus sequence typing scheme for subtyping of the major serovars of Salmonella enterica subsp. enterica. Applied and Environmental Microbiology. 77: 1946-56. PMID 21278266 DOI: 10.1128/Aem.02625-10 |
0.355 |
|
| 2010 |
Chaudhuri RR, Sebaihia M, Hobman JL, Webber MA, Leyton DL, Goldberg MD, Cunningham AF, Scott-Tucker A, Ferguson PR, Thomas CM, Frankel G, Tang CM, Dudley EG, Roberts IS, Rasko DA, et al. Complete genome sequence and comparative metabolic profiling of the prototypical enteroaggregative Escherichia coli strain 042. Plos One. 5: e8801. PMID 20098708 DOI: 10.1371/Journal.Pone.0008801 |
0.317 |
|
| 2009 |
Briczinski EP, Loquasto JR, Barrangou R, Dudley EG, Roberts AM, Roberts RF. Strain-specific genotyping of Bifidobacterium animalis subsp. lactis by using single-nucleotide polymorphisms, insertions, and deletions. Applied and Environmental Microbiology. 75: 7501-8. PMID 19801460 DOI: 10.1128/Aem.01430-09 |
0.346 |
|
| 2009 |
Liu K, Knabel SJ, Dudley EG. rhs genes are potential markers for multilocus sequence typing of Escherichia coli O157:H7 strains Applied and Environmental Microbiology. 75: 5853-5862. PMID 19633111 DOI: 10.1128/Aem.00859-09 |
0.36 |
|
| 2009 |
Barrangou R, Briczinski EP, Traeger LL, Loquasto JR, Richards M, Horvath P, Coûté-Monvoisin AC, Leyer G, Rendulic S, Steele JL, Broadbent JR, Oberg T, Dudley EG, Schuster S, Romero DA, et al. Comparison of the complete genome sequences of Bifidobacterium animalis subsp. lactis DSM 10140 and Bl-04. Journal of Bacteriology. 191: 4144-51. PMID 19376856 DOI: 10.1128/Jb.00155-09 |
0.52 |
|
| 2008 |
Melo NR, Moran GP, Warrilow AG, Dudley E, Smith SN, Sullivan DJ, Lamb DC, Kelly DE, Coleman DC, Kelly SL. CYP56 (Dit2p) in Candida albicans: characterization and investigation of its role in growth and antifungal drug susceptibility. Antimicrobial Agents and Chemotherapy. 52: 3718-24. PMID 18663031 DOI: 10.1128/Aac.00446-08 |
0.312 |
|
| 2008 |
Bexfield A, Bond AE, Roberts EC, Dudley E, Nigam Y, Thomas S, Newton RP, Ratcliffe NA. The antibacterial activity against MRSA strains and other bacteria of a <500 Da fraction from maggot excretions/secretions of Lucilia sericata (Diptera: Calliphoridae) Microbes and Infection. 10: 325-333. PMID 18400544 DOI: 10.1016/J.Micinf.2007.12.011 |
0.33 |
|
| 2006 |
Díaz-Muñiz I, Banavara DS, Budinich MF, Rankin SA, Dudley EG, Steele JL. Lactobacillus casei metabolic potential to utilize citrate as an energy source in ripening cheese: a bioinformatics approach. Journal of Applied Microbiology. 101: 872-82. PMID 16968299 DOI: 10.1111/J.1365-2672.2006.02965.X |
0.493 |
|
| 2006 |
Dudley EG, Thomson NR, Parkhill J, Morin NP, Nataro JP. Proteomic and microarray characterization of the AggR regulon identifies a pheU pathogenicity island in enteroaggregative Escherichia coli. Molecular Microbiology. 61: 1267-82. PMID 16925558 DOI: 10.1111/J.1365-2958.2006.05281.X |
0.373 |
|
| 2006 |
Sheikh J, Dudley EG, Sui B, Tamboura B, Suleman A, Nataro JP. EilA, a HilA-like regulator in enteroaggregative Escherichia coli. Molecular Microbiology. 61: 338-50. PMID 16762026 DOI: 10.1111/J.1365-2958.2006.05234.X |
0.345 |
|
| 2006 |
Dudley EG, Abe C, Ghigo JM, Latour-Lambert P, Hormazabal JC, Nataro JP. An IncI1 plasmid contributes to the adherence of the atypical enteroaggregative Escherichia coli strain C1096 to cultured cells and abiotic surfaces. Infection and Immunity. 74: 2102-14. PMID 16552039 DOI: 10.1128/Iai.74.4.2102-2114.2006 |
0.342 |
|
| 2006 |
Harrington SM, Dudley EG, Nataro JP. Pathogenesis of enteroaggregative Escherichia coli infection. Fems Microbiology Letters. 254: 12-8. PMID 16451173 DOI: 10.1111/J.1574-6968.2005.00005.X |
0.357 |
|
| 2005 |
Jenkins C, van Ijperen C, Dudley EG, Chart H, Willshaw GA, Cheasty T, Smith HR, Nataro JP. Use of a microarray to assess the distribution of plasmid and chromosomal virulence genes in strains of enteroaggregative Escherichia coli. Fems Microbiology Letters. 253: 119-24. PMID 16243450 DOI: 10.1016/J.Femsle.2005.09.040 |
0.331 |
|
| 2005 |
Dudley EG, Steele JL. Succinate production and citrate catabolism by Cheddar cheese nonstarter lactobacilli. Journal of Applied Microbiology. 98: 14-23. PMID 15610413 DOI: 10.1111/j.1365-2672.2004.02440.x |
0.452 |
|
| 2004 |
Carbonetti NH, Artamonova GV, Andreasen C, Dudley E, Mays RM, Worthington ZE. Suppression of serum antibody responses by pertussis toxin after respiratory tract colonization by Bordetella pertussis and identification of an immunodominant lipoprotein. Infection and Immunity. 72: 3350-8. PMID 15155640 DOI: 10.1128/Iai.72.6.3350-3358.2004 |
0.302 |
|
| 2001 |
Dudley EG, Steele JL. Lactococcus lactis LM0230 contains a single aminotransferase involved in aspartate biosynthesis, which is essential for growth in milk Microbiology. 147: 215-224. PMID 11160815 DOI: 10.1099/00221287-147-1-215 |
0.54 |
|
| 2000 |
Atiles MW, Dudley EG, Steele JL. Gene cloning, sequencing, and inactivation of the branched-chain aminotransferase of Lactococcus lactis LM0230. Applied and Environmental Microbiology. 66: 2325-9. PMID 10831406 DOI: 10.1128/Aem.66.6.2325-2329.2000 |
0.552 |
|
| 1999 |
Christensen JE, Dudley EG, Pederson JA, Steele JL. Peptidases and amino acid catabolism in lactic acid bacteria. Antonie Van Leeuwenhoek. 76: 217-46. PMID 10532381 DOI: 10.1023/A:1002001919720 |
0.661 |
|
| 1997 |
Shao W, Yüksel GU, Dudley EG, Parkin KL, Steele JL. Biochemical and molecular characterization of PepR, a dipeptidase, from Lactobacillus helveticus CNRZ32. Applied and Environmental Microbiology. 63: 3438-43. PMID 9292995 DOI: 10.1128/Aem.63.9.3438-3443.1997 |
0.535 |
|
| 1996 |
Dudley EG, Husgen AC, He W, Steele JL. Sequencing, distribution, and inactivation of the dipeptidase A gene (pepDA) from Lactobacillus helveticus CNRZ32. Journal of Bacteriology. 178: 701-4. PMID 8550503 DOI: 10.1128/Jb.178.3.701-704.1996 |
0.542 |
|
| 1994 |
Dudley EG, Steele JL. Nucleotide sequence and distribution of the pepPN gene from Lactobacillus helveticus CNRZ32. Fems Microbiology Letters. 119: 41-5. PMID 8039668 DOI: 10.1111/J.1574-6968.1994.Tb06864.X |
0.526 |
|
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