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Jason W. Abernathy, Ph.D. - Publications

Affiliations: 
2010 Auburn University, Auburn, AL, United States 
Area:
Parasitology Biology, Genetics, Molecular Biology
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30 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Sankappa NM, Lange MD, Yildirim-Aksoy M, Eljack R, Kucuktas H, Beck BH, Abernathy JW. Transcriptome analysis and immune gene expression of channel catfish () fed diets with inclusion of frass from black soldier fly larvae. Frontiers in Physiology. 14: 1330368. PMID 38264328 DOI: 10.3389/fphys.2023.1330368  0.326
2023 Abernathy JW, Zhang D, Liles MR, Lange MD, Shoemaker CA, Beck BH. Whole-Genome Sequencing and Annotation of Aeromonas veronii Isolates from Channel Catfish. Microbiology Resource Announcements. e0123122. PMID 36700629 DOI: 10.1128/mra.01231-22  0.357
2020 Lange MD, Abernathy J, Shoemaker CA, Zhang D, Kirby A, Peatman E, Beck BH. Proteome analysis of virulent Aeromonas hydrophila reveals the upregulation of iron acquisition systems in the presence of a xenosiderophore. Fems Microbiology Letters. PMID 33045069 DOI: 10.1093/femsle/fnaa169  0.573
2019 Abernathy J, Overturf K. Expression of Antisense Long Noncoding RNAs as Potential Regulators in Rainbow Trout with Different Tolerance to Plant-Based Diets. Animal Biotechnology. 30: 87-94. PMID 29300121 DOI: 10.1080/10495398.2017.1401546  0.332
2017 Abernathy J, Brezas A, Snekvik KR, Hardy RW, Overturf K. Integrative functional analyses using rainbow trout selected for tolerance to plant diets reveal nutrigenomic signatures for soy utilization without the concurrence of enteritis. Plos One. 12: e0180972. PMID 28723948 DOI: 10.1371/Journal.Pone.0180972  0.369
2016 Giatsis C, Sipkema D, Ramiro-Garcia J, Bacanu GM, Abernathy J, Verreth J, Smidt H, Verdegem M. Probiotic legacy effects on gut microbial assembly in tilapia larvae Scientific Reports. 6: 33965-33965. PMID 27670882 DOI: 10.1038/Srep33965  0.312
2014 Abernathy J, Li X, Jia X, Chou W, Lamont SJ, Crooijmans R, Zhou H. Copy number variation in Fayoumi and Leghorn chickens analyzed using array comparative genomic hybridization. Animal Genetics. 45: 400-11. PMID 24628374 DOI: 10.1111/Age.12141  0.402
2014 Miller MM, Robinson CM, Abernathy J, Goto RM, Hamilton MK, Zhou H, Delany ME. Mapping genes to chicken microchromosome 16 and discovery of olfactory and scavenger receptor genes near the major histocompatibility complex. The Journal of Heredity. 105: 203-15. PMID 24336927 DOI: 10.1093/Jhered/Est091  0.487
2013 Abernathy J, Corkill C, Hinojosa C, Li X, Zhou H. Deletions in the pyruvate pathway of Salmonella Typhimurium alter SPI1-mediated gene expression and infectivity. Journal of Animal Science and Biotechnology. 4: 5. PMID 23442379 DOI: 10.1186/2049-1891-4-5  0.401
2013 Coble DJ, Sandford EE, Ji T, Abernathy J, Fleming D, Zhao H, Lamont SJ. Impacts of Salmonella enteritidis infection on liver transcriptome in broilers. Genesis (New York, N.Y. : 2000). 51: 357-64. PMID 23097340 DOI: 10.1002/Dvg.22351  0.391
2012 Ninwichian P, Peatman E, Liu H, Kucuktas H, Somridhivej B, Liu S, Li P, Jiang Y, Sha Z, Kaltenboeck L, Abernathy JW, Wang W, Chen F, Lee Y, Wong L, et al. Second-generation genetic linkage map of catfish and its integration with the BAC-based physical map. G3 (Bethesda, Md.). 2: 1233-41. PMID 23050234 DOI: 10.1534/G3.112.003962  0.711
2011 Abernathy J, Xu DH, Peatman E, Kucuktas H, Klesius P, Liu Z. Gene expression profiling of a fish parasite Ichthyophthirius multifiliis: Insights into development and senescence-associated avirulence. Comparative Biochemistry and Physiology. Part D, Genomics & Proteomics. 6: 382-92. PMID 21890440 DOI: 10.1016/J.Cbd.2011.08.003  0.704
2011 Liu H, Peatman E, Wang W, Abernathy J, Liu S, Kucuktas H, Terhune J, Xu DH, Klesius P, Liu Z. Molecular responses of ceruloplasmin to Edwardsiella ictaluri infection and iron overload in channel catfish (Ictalurus punctatus). Fish & Shellfish Immunology. 30: 992-7. PMID 21220026 DOI: 10.1016/J.Fsi.2010.12.033  0.737
2011 Liu H, Peatman E, Wang W, Abernathy J, Liu S, Kucuktas H, Lu J, Xu DH, Klesius P, Waldbieser G, Liu Z. Molecular responses of calreticulin genes to iron overload and bacterial challenge in channel catfish (Ictalurus punctatus). Developmental and Comparative Immunology. 35: 267-72. PMID 21093478 DOI: 10.1016/J.Dci.2010.11.009  0.723
2010 Chen F, Lee Y, Jiang Y, Wang S, Peatman E, Abernathy J, Liu H, Liu S, Kucuktas H, Ke C, Liu Z. Identification and characterization of full-length cDNAs in channel catfish (Ictalurus punctatus) and blue catfish (Ictalurus furcatus). Plos One. 5: e11546. PMID 20634964 DOI: 10.1371/Journal.Pone.0011546  0.749
2010 Lu J, Peatman E, Wang W, Yang Q, Abernathy J, Wang S, Kucuktas H, Liu Z. Alternative splicing in teleost fish genomes: same-species and cross-species analysis and comparisons. Molecular Genetics and Genomics : Mgg. 283: 531-9. PMID 20383527 DOI: 10.1007/S00438-010-0538-3  0.753
2010 Liu H, Takano T, Peatman E, Abernathy J, Wang S, Sha Z, Kucuktas H, Xu DH, Klesius P, Liu Z. Molecular characterization and gene expression of the channel catfish ferritin H subunit after bacterial infection and iron treatment. Journal of Experimental Zoology. Part a, Ecological Genetics and Physiology. 313: 359-68. PMID 20336795 DOI: 10.1002/Jez.606  0.746
2010 Wang S, Peatman E, Abernathy J, Waldbieser G, Lindquist E, Richardson P, Lucas S, Wang M, Li P, Thimmapuram J, Liu L, Vullaganti D, Kucuktas H, Murdock C, Small BC, et al. Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies. Genome Biology. 11: R8. PMID 20096101 DOI: 10.1186/Gb-2010-11-1-R8  0.759
2010 Jiang Y, Abernathy JW, Peatman E, Liu H, Wang S, Xu DH, Kucuktas H, Klesius P, Liu Z. Identification and characterization of matrix metalloproteinase-13 sequence structure and expression during embryogenesis and infection in channel catfish (Ictalurus punctatus). Developmental and Comparative Immunology. 34: 590-7. PMID 20060415 DOI: 10.1016/J.Dci.2010.01.001  0.695
2010 Liu H, Takano T, Abernathy J, Wang S, Sha Z, Jiang Y, Terhune J, Kucuktas H, Peatman E, Liu Z. Structure and expression of transferrin gene of channel catfish, Ictalurus punctatus. Fish & Shellfish Immunology. 28: 159-66. PMID 19837170 DOI: 10.1016/J.Fsi.2009.10.014  0.765
2009 Abernathy JW, Xu DH, Li P, Klesius P, Kucuktas H, Liu Z. Transcriptomic profiling of Ichthyophthirius multifiliis reveals polyadenylation of the large subunit ribosomal RNA. Comparative Biochemistry and Physiology. Part D, Genomics & Proteomics. 4: 179-86. PMID 20403762 DOI: 10.1016/J.Cbd.2009.02.004  0.524
2009 Liu H, Jiang Y, Wang S, Ninwichian P, Somridhivej B, Xu P, Abernathy J, Kucuktas H, Liu Z. Comparative analysis of catfish BAC end sequences with the zebrafish genome. Bmc Genomics. 10: 592. PMID 20003258 DOI: 10.1186/1471-2164-10-592  0.677
2009 Abernathy JW, Lu J, Liu H, Kucuktas H, Liu Z. Molecular characterization of complement factor I reveals constitutive expression in channel catfish. Fish & Shellfish Immunology. 27: 529-34. PMID 19540919 DOI: 10.1016/J.Fsi.2009.06.007  0.584
2009 Sha Z, Abernathy JW, Wang S, Li P, Kucuktas H, Liu H, Peatman E, Liu Z. NOD-like subfamily of the nucleotide-binding domain and leucine-rich repeat containing family receptors and their expression in channel catfish. Developmental and Comparative Immunology. 33: 991-9. PMID 19414032 DOI: 10.1016/J.Dci.2009.04.004  0.768
2009 Kucuktas H, Wang S, Li P, He C, Xu P, Sha Z, Liu H, Jiang Y, Baoprasertkul P, Somridhivej B, Wang Y, Abernathy J, Guo X, Liu L, Muir W, et al. Construction of genetic linkage maps and comparative genome analysis of catfish using gene-associated markers. Genetics. 181: 1649-60. PMID 19171943 DOI: 10.1534/Genetics.108.098855  0.767
2009 Xu DH, Panangala VS, Van Santen VL, Dybvig K, Abernathy JW, Klesius PH, Liu Z, Russo R. Molecular characteristics of an immobilization antigen gene of the fish-parasitic protozoan Ichthyophthirius multifiliis strain ARS-6 Aquaculture Research. 40: 1884-1892. DOI: 10.1111/J.1365-2109.2009.02301.X  0.5
2007 Abernathy JW, Xu P, Li P, Xu DH, Kucuktas H, Klesius P, Arias C, Liu Z. Generation and analysis of expressed sequence tags from the ciliate protozoan parasite Ichthyophthirius multifiliis. Bmc Genomics. 8: 176. PMID 17577414 DOI: 10.1186/1471-2164-8-176  0.636
2007 Quilang J, Wang S, Li P, Abernathy J, Peatman E, Wang Y, Wang L, Shi Y, Wallace R, Guo X, Liu Z. Generation and analysis of ESTs from the eastern oyster, Crassostrea virginica Gmelin and identification of microsatellite and SNP markers. Bmc Genomics. 8: 157. PMID 17559679 DOI: 10.1186/1471-2164-8-157  0.724
2007 Baoprasertkul P, Peatman E, Abernathy J, Liu Z. Structural characterisation and expression analysis of toll-like receptor 2 gene from catfish. Fish & Shellfish Immunology. 22: 418-26. PMID 17116407 DOI: 10.1016/J.Fsi.2006.04.005  0.739
2006 Arias CR, Abernathy JW, Liu Z. Combined use of 16S ribosomal DNA and automated ribosomal intergenic spacer analysis to study the bacterial community in catfish ponds. Letters in Applied Microbiology. 43: 287-92. PMID 16910933 DOI: 10.1111/J.1472-765X.2006.01955.X  0.428
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