| Year |
Citation |
Score |
| 2024 |
Schlimgen RR, Peterson FC, Heukers R, Smit MJ, McCorvy JD, Volkman BF. Structural basis for selectivity and antagonism in extracellular GPCR-nanobodies. Nature Communications. 15: 4611. PMID 38816420 DOI: 10.1038/s41467-024-49000-x |
0.314 |
|
| 2023 |
Crawford KS, Volkman BF. Prospects for targeting ACKR1 in cancer and other diseases. Frontiers in Immunology. 14: 1111960. PMID 37006247 DOI: 10.3389/fimmu.2023.1111960 |
0.309 |
|
| 2023 |
Zhou AL, Jensen DR, Peterson FC, Thomas MA, Schlimgen RR, Dwinell MB, Smith BC, Volkman BF. Fragment-based drug discovery of small molecule ligands for the human chemokine CCL28. Slas Discovery : Advancing Life Sciences R & D. PMID 36841432 DOI: 10.1016/j.slasd.2023.02.004 |
0.301 |
|
| 2022 |
Berg C, Wedemeyer MJ, Melynis M, Schlimgen RR, Hansen LH, Våbenø J, Peterson FC, Volkman BF, Rosenkilde MM, Lüttichau HR. The non-ELR CXC chemokine encoded by human cytomegalovirus UL146 genotype 5 contains a C-terminal β-hairpin and induces neutrophil migration as a selective CXCR2 agonist. Plos Pathogens. 18: e1010355. PMID 35271688 DOI: 10.1371/journal.ppat.1010355 |
0.334 |
|
| 2022 |
Brandum EP, Jørgensen AS, Calvo MB, Spiess K, Peterson FC, Yang Z, Volkman BF, Veldkamp CT, Rosenkilde MM, Goth CK, Hjortø GM. Selective Boosting of CCR7-Acting Chemokines; Short Peptides Boost Chemokines with Short Basic Tails, Longer Peptides Boost Chemokines with Long Basic Tails. International Journal of Molecular Sciences. 23. PMID 35163323 DOI: 10.3390/ijms23031397 |
0.728 |
|
| 2022 |
Lewandowski EM, Kroeck KG, Jacobs LMC, Fenske TG, Witt RN, Hintz AM, Ramsden ER, Zhang X, Peterson F, Volkman BF, Veldkamp CT, Chen Y. Structural Insights into Molecular Recognition by Human Chemokine CCL19. Biochemistry. PMID 35156805 DOI: 10.1021/acs.biochem.1c00759 |
0.778 |
|
| 2021 |
Sprague DJ, Getschman AE, Fenske TG, Volkman BF, Smith BC. Trisubstituted 1,3,5-Triazines: The First Ligands of the sY12-Binding Pocket on Chemokine CXCL12. Acs Medicinal Chemistry Letters. 12: 1773-1782. PMID 34795867 DOI: 10.1021/acsmedchemlett.1c00388 |
0.378 |
|
| 2021 |
Jørgensen AS, Brandum EP, Mikkelsen JM, Orfin KA, Boilesen DR, Egerod KL, Moussouras NA, Vilhardt F, Kalinski P, Basse P, Chen YH, Yang Z, Dwinell MB, Volkman BF, Veldkamp CT, et al. The C-terminal peptide of CCL21 drastically augments CCL21 activity through the dendritic cell lymph node homing receptor CCR7 by interaction with the receptor N-terminus. Cellular and Molecular Life Sciences : Cmls. PMID 34586443 DOI: 10.1007/s00018-021-03930-7 |
0.751 |
|
| 2021 |
Vaidya AS, Peterson FC, Eckhardt J, Xing Z, Park SY, Dejonghe W, Takeuchi J, Pri-Tal O, Faria J, Elzinga D, Volkman BF, Todoroki Y, Mosquna A, Okamoto M, Cutler SR. Click-to-lead design of a picomolar ABA receptor antagonist with potent activity in vivo. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34531324 DOI: 10.1073/pnas.2108281118 |
0.311 |
|
| 2021 |
Gutjahr JC, Crawford KS, Jensen DR, Naik P, Peterson FC, Samson GPB, Legler DF, Duchene J, Veldkamp CT, Rot A, Volkman BF. The dimeric form of CXCL12 binds to atypical chemokine receptor 1. Science Signaling. 14. PMID 34404752 DOI: 10.1126/scisignal.abc9012 |
0.755 |
|
| 2020 |
Dishman AF, Peterson FC, Volkman BF. Specific binding-induced modulation of the XCL1 metamorphic equilibrium. Biopolymers. e23402. PMID 32986858 DOI: 10.1002/bip.23402 |
0.359 |
|
| 2020 |
Wedemeyer MJ, Mahn SA, Getschman AE, Crawford KS, Peterson FC, Marchese A, McCorvy JD, Volkman BF. The chemokine X-factor: structure-function analysis of the CXC motif at CXCR4 and ACKR3. The Journal of Biological Chemistry. PMID 32788219 DOI: 10.1074/Jbc.Ra120.014244 |
0.5 |
|
| 2020 |
Dishman AF, Lee MW, de Anda J, Lee EY, He J, Huppler A, Wong G, Volkman BF. Switchable membrane remodeling and antifungal defense by metamorphic chemokine XCL1. Acs Infectious Diseases. PMID 32243126 DOI: 10.1021/Acsinfecdis.0C00011 |
0.353 |
|
| 2020 |
Moussouras NA, Hjortø GM, Peterson FC, Szpakowska M, Chevigné A, Rosenkilde MM, Volkman BF, Dwinell MB. Structural Features of an Extended C-Terminal Tail Modulate the Function of the Chemokine CCL21. Biochemistry. PMID 32182428 DOI: 10.1021/Acs.Biochem.0C00047 |
0.461 |
|
| 2020 |
Gao X, Enten GA, DeSantis AJ, Volkman BF, Gaponenko V, Majetschak M. Characterization of heteromeric complexes between chemokine (C-X-C motif) receptor 4 and α-adrenergic receptors utilizing intermolecular bioluminescence resonance energy transfer assays. Biochemical and Biophysical Research Communications. PMID 32085899 DOI: 10.1016/J.Bbrc.2020.02.094 |
0.356 |
|
| 2020 |
Lau S, Feitzinger A, Venkiteswaran G, Wang J, Lewellis SW, Koplinski CA, Peterson FC, Volkman BF, Meier-Schellersheim M, Knaut H. A negative-feedback loop maintains optimal chemokine concentrations for directional cell migration. Nature Cell Biology. PMID 32042179 DOI: 10.1038/S41556-020-0465-4 |
0.306 |
|
| 2020 |
Wedemeyer MJ, Mueller BK, Bender BJ, Meiler J, Volkman BF. Comparative modeling and docking of chemokine-receptor interactions with Rosetta. Biochemical and Biophysical Research Communications. PMID 31924303 DOI: 10.1016/J.Bbrc.2019.12.076 |
0.485 |
|
| 2019 |
Vaidya AS, Helander JDM, Peterson FC, Elzinga D, Dejonghe W, Kaundal A, Park SY, Xing Z, Mega R, Takeuchi J, Khanderahoo B, Bishay S, Volkman BF, Todoroki Y, Okamoto M, et al. Dynamic control of plant water use using designed ABA receptor agonists. Science (New York, N.Y.). 366. PMID 31649167 DOI: 10.1126/Science.Aaw8848 |
0.341 |
|
| 2019 |
Fox JC, Thomas MA, Dishman AF, Larsen O, Nakayama T, Yoshie O, Rosenkilde MM, Volkman BF. Structure-function guided modeling of chemokine-GPCR specificity for the chemokine XCL1 and its receptor XCR1. Science Signaling. 12. PMID 31481523 DOI: 10.1126/Scisignal.Aat4128 |
0.486 |
|
| 2019 |
Elmansi AM, Awad ME, Eisa NH, Kondrikov D, Hussein KA, Aguilar-Pérez A, Herberg S, Periyasamy-Thandavan S, Fulzele S, Hamrick MW, McGee-Lawrence ME, Isales CM, Volkman BF, Hill WD. What doesn't kill you makes you stranger: Dipeptidyl peptidase-4 (CD26) proteolysis differentially modulates the activity of many peptide hormones and cytokines generating novel cryptic bioactive ligands. Pharmacology & Therapeutics. PMID 30759373 DOI: 10.1016/J.Pharmthera.2019.02.005 |
0.394 |
|
| 2019 |
Wedemeyer MJ, Mueller BK, Bender BJ, Meiler J, Volkman BF. Modeling the complete chemokine-receptor interaction. Methods in Cell Biology. 149: 289-314. PMID 30616825 DOI: 10.1016/Bs.Mcb.2018.09.005 |
0.472 |
|
| 2019 |
Kleist AB, Peterson F, Tyler RC, Gustavsson M, Handel TM, Volkman BF. Solution NMR spectroscopy of GPCRs: Residue-specific labeling strategies with a focus on C-methyl methionine labeling of the atypical chemokine receptor ACKR3. Methods in Cell Biology. 149: 259-288. PMID 30616824 DOI: 10.1016/Bs.Mcb.2018.09.004 |
0.428 |
|
| 2018 |
Hitchinson B, Eby JM, Gao X, Guite-Vinet F, Ziarek JJ, Abdelkarim H, Lee Y, Okamoto Y, Shikano S, Majetschak M, Heveker N, Volkman BF, Tarasova NI, Gaponenko V. Biased antagonism of CXCR4 avoids antagonist tolerance. Science Signaling. 11. PMID 30327409 DOI: 10.1126/Scisignal.Aat2214 |
0.736 |
|
| 2018 |
Gao X, Abdelkarim H, Albee LJ, Volkman BF, Gaponenko V, Majetschak M. Partial agonist activity of α1-adrenergic receptor antagonists for chemokine (C-X-C motif) receptor 4 and atypical chemokine receptor 3. Plos One. 13: e0204041. PMID 30248140 DOI: 10.1371/Journal.Pone.0204041 |
0.38 |
|
| 2018 |
Riutta SJ, Larsen O, Getschman AE, Rosenkilde MM, Hwang ST, Volkman BF. Mutational analysis of CCL20 reveals flexibility of N-terminal amino acid composition and length. Journal of Leukocyte Biology. 104: 423-434. PMID 30114340 DOI: 10.1002/Jlb.1Vma0218-049R |
0.471 |
|
| 2018 |
Thomas MA, He J, Peterson FC, Huppler AR, Volkman BF. The Solution Structure of CCL28 Reveals Structural Lability that Does Not Constrain Antifungal Activity. Journal of Molecular Biology. PMID 29913161 DOI: 10.1016/J.Jmb.2018.06.001 |
0.384 |
|
| 2018 |
Thomas MA, Kleist AB, Volkman BF. Decoding the chemotactic signal. Journal of Leukocyte Biology. PMID 29873835 DOI: 10.1002/Jlb.1Mr0218-044 |
0.33 |
|
| 2018 |
Dishman AF, Volkman BF. Unfolding the mysteries of protein metamorphosis. Acs Chemical Biology. PMID 29787234 DOI: 10.1021/Acschembio.8B00276 |
0.312 |
|
| 2018 |
Gao X, Albee LJ, Volkman BF, Gaponenko V, Majetschak M. Asymmetrical ligand-induced cross-regulation of chemokine (C-X-C motif) receptor 4 by α1-adrenergic receptors at the heteromeric receptor complex. Scientific Reports. 8: 2730. PMID 29426850 DOI: 10.1038/S41598-018-21096-4 |
0.383 |
|
| 2018 |
Albee LJ, LaPorte HM, Gao X, Eby JM, Cheng YH, Nevins AM, Volkman BF, Gaponenko V, Majetschak M. Identification and functional characterization of arginine vasopressin receptor 1A : atypical chemokine receptor 3 heteromers in vascular smooth muscle. Open Biology. 8. PMID 29386406 DOI: 10.1098/Rsob.170207 |
0.369 |
|
| 2018 |
Thomas MA, Peterson FC, Volkman BF. The NMR solution structure of CCL28 Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.2210/Pdb6Cws/Pdb |
0.321 |
|
| 2017 |
Szpakowska M, Nevins AM, Meyrath M, Rhainds D, D'huys T, Guité-Vinet F, Dupuis N, Gauthier PA, Counson M, Kleist A, St-Onge G, Hanson J, Schols D, Volkman BF, Heveker N, et al. Different contribution of chemokine N-terminal features attest a different ligand binding mode and a bias towards activation of the atypical chemokine receptor ACKR3/CXCR7 compared to CXCR4 and CXCR3. British Journal of Pharmacology. PMID 29272550 DOI: 10.1111/Bph.14132 |
0.434 |
|
| 2017 |
Egner JM, Jensen DR, Olp MD, Kennedy NW, Volkman BF, Peterson FC, Smith BC, Hill RB. Development and Validation of 2D Difference Intensity Analysis for Chemical Library Screening by Protein-Detected NMR. Chembiochem : a European Journal of Chemical Biology. PMID 29239081 DOI: 10.1002/Cbic.201700386 |
0.335 |
|
| 2017 |
Cheng YH, Eby JM, LaPorte HM, Volkman BF, Majetschak M. Effects of cognate, non-cognate and synthetic CXCR4 and ACKR3 ligands on human lung endothelial cell barrier function. Plos One. 12: e0187949. PMID 29125867 DOI: 10.1371/Journal.Pone.0187949 |
0.325 |
|
| 2017 |
Getschman AE, Imai Y, Larsen O, Peterson FC, Wu X, Rosenkilde MM, Hwang ST, Volkman BF. Protein engineering of the chemokine CCL20 prevents psoriasiform dermatitis in an IL-23-dependent murine model. Proceedings of the National Academy of Sciences of the United States of America. PMID 29109267 DOI: 10.1073/Pnas.1704958114 |
0.36 |
|
| 2017 |
Vaidya AS, Peterson FC, Yarmolinsky D, Merilo E, Verstraeten I, Park SY, Elzinga D, Kaundal A, Helander J, Lozano-Juste J, Otani M, Wu K, Jensen DR, Kollist H, Volkman BF, et al. A rationally designed agonist defines subfamily IIIA ABA receptors as critical targets for manipulating transpiration. Acs Chemical Biology. PMID 28949512 DOI: 10.1021/Acschembio.7B00650 |
0.401 |
|
| 2017 |
Moussouras NA, Getschman AE, Lackner ER, Veldkamp CT, Dwinell MB, Volkman BF. Differences in Sulfotyrosine Binding amongst CXCR1 and CXCR2 Chemokine Ligands. International Journal of Molecular Sciences. 18. PMID 28869519 DOI: 10.3390/Ijms18091894 |
0.763 |
|
| 2017 |
Albee LJ, Eby JM, Tripathi A, LaPorte HM, Gao X, Volkman BF, Gaponenko V, Majetschak M. α1-Adrenergic Receptors Function Within Hetero-Oligomeric Complexes With Atypical Chemokine Receptor 3 and Chemokine (C-X-C motif) Receptor 4 in Vascular Smooth Muscle Cells. Journal of the American Heart Association. 6. PMID 28862946 DOI: 10.1161/Jaha.117.006575 |
0.344 |
|
| 2017 |
Phillips AJ, Taleski D, Koplinski CA, Getschman AE, Moussouras NA, Richard AM, Peterson FC, Dwinell MB, Volkman BF, Payne RJ, Veldkamp CT. CCR7 Sulfotyrosine Enhances CCL21 Binding. International Journal of Molecular Sciences. 18. PMID 28841151 DOI: 10.3390/Ijms18091857 |
0.77 |
|
| 2017 |
Hall CL, Lytle BL, Jensen D, Hoff JS, Peterson FC, Volkman BF, Kristich CJ. Structure and dimerization of IreB, a negative regulator of cephalosporin resistance in Enterococcus faecalis. Journal of Molecular Biology. PMID 28551334 DOI: 10.1016/J.Jmb.2017.05.019 |
0.323 |
|
| 2017 |
Eby JM, Abdelkarim H, Albee LJ, Tripathi A, Gao X, Volkman BF, Gaponenko V, Majetschak M. Functional and structural consequences of chemokine (C-X-C motif) receptor 4 activation with cognate and non-cognate agonists. Molecular and Cellular Biochemistry. PMID 28455789 DOI: 10.1007/S11010-017-3044-7 |
0.428 |
|
| 2017 |
Ziarek JJ, Kleist AB, London N, Raveh B, Montpas N, Bonneterre J, St-Onge G, DiCosmo-Ponticello CJ, Koplinski CA, Roy I, Stephens B, Thelen S, Veldkamp CT, Coffman FD, Cohen MC, ... ... Volkman BF, et al. Structural basis for chemokine recognition by a G protein-coupled receptor and implications for receptor activation. Science Signaling. 10. PMID 28325822 DOI: 10.1126/Scisignal.Aah5756 |
0.829 |
|
| 2017 |
Chadwick AC, Jensen DR, Hanson PJ, Lange PT, Proudfoot SC, Peterson FC, Volkman BF, Sahoo D. NMR Structure of the C-Terminal Transmembrane Domain of the HDL Receptor, SR-BI, and a Functionally Relevant Leucine Zipper Motif. Structure (London, England : 1993). PMID 28162952 DOI: 10.1016/J.Str.2017.01.001 |
0.396 |
|
| 2016 |
Roy I, Getschman AE, Volkman BF, Dwinell MB. Exploiting agonist biased signaling of chemokines to target cancer. Molecular Carcinogenesis. PMID 27648825 DOI: 10.1002/Mc.22571 |
0.324 |
|
| 2016 |
Smith EW, Lewandowski EM, Moussouras NA, Kroeck KG, Volkman BF, Veldkamp CT, Chen Y. Crystallographic structure of truncated CCL21 and putative sulfotyrosine-binding site. Biochemistry. PMID 27617343 DOI: 10.1021/Acs.Biochem.6B00304 |
0.783 |
|
| 2016 |
Whitney DS, Volkman BF, Prehoda KE. Evolution of a protein interaction domain family by tuning conformational flexibility. Journal of the American Chemical Society. PMID 27502157 DOI: 10.1021/Jacs.6B05954 |
0.407 |
|
| 2016 |
Cimbro R, Peterson FC, Liu Q, Guzzo C, Zhang P, Miao H, Van Ryk D, Ambroggio X, Hurt DE, De Gioia L, Volkman BF, Dolan MA, Lusso P. Tyrosine-sulfated V2 peptides inhibit HIV-1 infection via coreceptor mimicry. Ebiomedicine. PMID 27389109 DOI: 10.1016/J.Ebiom.2016.06.037 |
0.355 |
|
| 2016 |
Evans AE, Tripathi A, LaPorte HM, Brueggemann LI, Singh AK, Albee LJ, Byron KL, Tarasova NI, Volkman BF, Cho TY, Gaponenko V, Majetschak M. New Insights into Mechanisms and Functions of Chemokine (C-X-C Motif) Receptor 4 Heteromerization in Vascular Smooth Muscle. International Journal of Molecular Sciences. 17. PMID 27331810 DOI: 10.3390/Ijms17060971 |
0.391 |
|
| 2016 |
Nevins AM, Subramanian A, Tapia JL, Delgado DP, Tyler RC, Jensen DR, Ouellette AJ, Volkman BF. A Requirement for Metamorphic Interconversion in the Antimicrobial Activity of the Chemokine XCL1. Biochemistry. PMID 27305837 DOI: 10.1021/Acs.Biochem.6B00353 |
0.347 |
|
| 2016 |
Kleist AB, Getschman AE, Ziarek JJ, Nevins AM, Gauthier PA, Chevigné A, Szpakowska M, Volkman BF. New paradigms in chemokine receptor signal transduction: moving beyond the two-site model. Biochemical Pharmacology. PMID 27106080 DOI: 10.1016/J.Bcp.2016.04.007 |
0.754 |
|
| 2016 |
Smith EW, Nevins AM, Qiao Z, Liu Y, Getschman AE, Vankayala SL, Kemp MT, Peterson FC, Li R, Volkman BF, Chen Y. Structure-based identification of novel ligands targeting multiple sites within a chemokine-G protein-coupled receptor interface. Journal of Medicinal Chemistry. PMID 27058821 DOI: 10.1021/Acs.Jmedchem.5B02042 |
0.506 |
|
| 2016 |
Whitney DS, Peterson FC, Kittell AW, Egner JM, Prehoda KE, Volkman BF. Correction to Binding of Crumbs to the Par-6 CRIB-PDZ Module Is Regulated by Cdc42. Biochemistry. PMID 27012924 DOI: 10.1021/Acs.Biochem.6B00254 |
0.341 |
|
| 2016 |
Veldkamp CT, Koplinski CA, Jensen DR, Peterson FC, Smits KM, Smith BL, Johnson SK, Lettieri C, Buchholz WG, Solheim JC, Volkman BF. Production of Recombinant Chemokines and Validation of Refolding. Methods in Enzymology. 570: 539-65. PMID 26921961 DOI: 10.1016/Bs.Mie.2015.09.031 |
0.711 |
|
| 2016 |
Whitney DS, Peterson FC, Kittell AW, Egner JM, Prehoda KE, Volkman BF. Crumbs binding to the Par-6 CRIB-PDZ module is regulated by Cdc42. Biochemistry. PMID 26894406 DOI: 10.1021/Acs.Biochem.5B01342 |
0.44 |
|
| 2016 |
Fox JC, Tyler RC, Peterson FC, Dyer DP, Zhang F, Linhardt RJ, Handel TM, Volkman BF. Examination of Glycosaminoglycan Binding Sites on the XCL1 Dimer. Biochemistry. PMID 26836755 DOI: 10.1021/Acs.Biochem.5B01329 |
0.414 |
|
| 2016 |
Anderson DP, Whitney DS, Hanson-Smith V, Woznica A, Campodonico-Burnett W, Volkman BF, King N, Prehoda KE, Thornton JW. Evolution of an ancient protein function involved in organized multicellularity in animals. Elife. 5. PMID 26740169 DOI: 10.7554/Elife.10147 |
0.346 |
|
| 2016 |
Ziarek J, Peterson F, Volkman B. Structure of constitutively monomeric CXCL12 in complex with the CXCR4 N-terminus Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.2210/Pdb2N55/Pdb |
0.717 |
|
| 2016 |
Thomas MA, Peterson FC, Volkman BF. Using Structural and Dynamic NMR Analyses to Dissect the Pathologic Function of a Novel Chemokine Biophysical Journal. 110: 221. DOI: 10.1016/J.Bpj.2015.11.1223 |
0.448 |
|
| 2016 |
Veldkamp CT, Koplinski CA, Jensen DR, Peterson FC, Smits KM, Smith BL, Johnson SK, Lettieri C, Buchholz WG, Solheim JC, Volkman BF. Production of Recombinant Chemokines and Validation of Refolding Methods in Enzymology. 570: 539-565. DOI: 10.1016/bs.mie.2015.09.031 |
0.642 |
|
| 2015 |
Kiermaier E, Moussion C, Veldkamp CT, Gerardy-Schahn R, de Vries I, Williams LG, Chaffee GR, Phillips AJ, Freiberger F, Imre R, Taleski D, Payne RJ, Braun A, Förster R, Mechtler K, ... ... Volkman BF, et al. Polysialylation controls dendritic cell trafficking by regulating chemokine recognition. Science (New York, N.Y.). PMID 26657283 DOI: 10.1126/Science.Aad0512 |
0.731 |
|
| 2015 |
Dyer DP, Salanga CL, Volkman BF, Kawamura T, Handel TM. The dependence of chemokine-glycosaminoglycan interactions on chemokine oligomerization. Glycobiology. PMID 26582609 DOI: 10.1093/Glycob/Cwv100 |
0.436 |
|
| 2015 |
Roy I, McAllister DM, Gorse E, Dixon K, Piper CT, Zimmerman NP, Getschman AE, Tsai S, Engle DD, Evans DB, Volkman BF, Kalyanaraman B, Dwinell MB. Pancreatic Cancer Cell Migration and Metastasis Is Regulated by Chemokine-Biased Agonism and Bioenergetic Signaling. Cancer Research. 75: 3529-42. PMID 26330165 DOI: 10.1158/0008-5472.Can-14-2645 |
0.311 |
|
| 2015 |
Fox JC, Tyler RC, Guzzo C, Tuinstra RL, Peterson FC, Lusso P, Volkman BF. Engineering Metamorphic Chemokine Lymphotactin/XCL1 into the GAG-Binding, HIV-Inhibitory Dimer Conformation. Acs Chemical Biology. PMID 26302421 DOI: 10.1021/Acschembio.5B00542 |
0.436 |
|
| 2015 |
Migliorini E, Thakar D, Kühnle J, Sadir R, Dyer DP, Li Y, Sun C, Volkman BF, Handel TM, Coche-Guerente L, Fernig DG, Lortat-Jacob H, Richter RP. Cytokines and growth factors cross-link heparan sulfate. Open Biology. 5. PMID 26269427 DOI: 10.1098/Rsob.150046 |
0.402 |
|
| 2015 |
Whitney DS, Volkman BF. Some (dis)assembly required: partial unfolding in the Par-6 allosteric switch. Biophysical Reviews. 7: 183-190. PMID 26236405 DOI: 10.1007/S12551-015-0164-8 |
0.435 |
|
| 2015 |
Korkmaz EN, Volkman BF, Cui Q. Interplay of Electrostatics and Hydrophobic Effects in the Metamorphic Protein Human Lymphotactin. The Journal of Physical Chemistry. B. PMID 26134347 DOI: 10.1021/Acs.Jpcb.5B02810 |
0.332 |
|
| 2015 |
Guzzo C, Fox JC, Miao H, Volkman BF, Lusso P. Structural Determinants for the Selective Anti-HIV-1 Activity of the All-β Alternative Conformer of XCL1. Journal of Virology. PMID 26085164 DOI: 10.1128/Jvi.01285-15 |
0.333 |
|
| 2015 |
Maule AF, Wright DP, Weiner JJ, Han L, Peterson FC, Volkman BF, Silvaggi NR, Ulijasz AT. The aspartate-less receiver (ALR) domains: distribution, structure and function. Plos Pathogens. 11: e1004795. PMID 25875291 DOI: 10.1371/Journal.Ppat.1004795 |
0.351 |
|
| 2015 |
Olson LJ, Jensen DR, Volkman BF, Kim JJ, Peterson FC, Gundry RL, Dahms NM. Bacterial expression of the phosphodiester-binding site of the cation-independent mannose 6-phosphate receptor for crystallographic and NMR studies. Protein Expression and Purification. 111: 91-7. PMID 25863146 DOI: 10.1016/J.Pep.2015.04.002 |
0.452 |
|
| 2015 |
Aceti DJ, Bingman CA, Wrobel RL, Frederick RO, Makino S, Nichols KW, Sahu SC, Bergeman LF, Blommel PG, Cornilescu CC, Gromek KA, Seder KD, Hwang S, Primm JG, Sabat G, ... ... Volkman BF, et al. Expression platforms for producing eukaryotic proteins: a comparison of E. coli cell-based and wheat germ cell-free synthesis, affinity and solubility tags, and cloning strategies. Journal of Structural and Functional Genomics. 16: 67-80. PMID 25854603 DOI: 10.1007/S10969-015-9198-1 |
0.343 |
|
| 2015 |
Harvey SR, Porrini M, Tyler RC, MacPhee CE, Volkman BF, Barran PE. Electron capture dissociation and drift tube ion mobility-mass spectrometry coupled with site directed mutations provide insights into the conformational diversity of a metamorphic protein. Physical Chemistry Chemical Physics : Pccp. 17: 10538-50. PMID 25805055 DOI: 10.1039/C4Cp05136J |
0.33 |
|
| 2015 |
Tripathi A, Vana PG, Chavan TS, Brueggemann LI, Byron KL, Tarasova NI, Volkman BF, Gaponenko V, Majetschak M. Heteromerization of chemokine (C-X-C motif) receptor 4 with α1A/B-adrenergic receptors controls α1-adrenergic receptor function. Proceedings of the National Academy of Sciences of the United States of America. 112: E1659-68. PMID 25775528 DOI: 10.1073/Pnas.1417564112 |
0.389 |
|
| 2015 |
Park SY, Peterson FC, Mosquna A, Yao J, Volkman BF, Cutler SR. Agrochemical control of plant water use using engineered abscisic acid receptors. Nature. 520: 545-8. PMID 25652827 DOI: 10.1038/Nature14123 |
0.313 |
|
| 2015 |
Thomas MA, Buelow BJ, Nevins AM, Jones SE, Peterson FC, Gundry RL, Grayson MH, Volkman BF. Structure-function analysis of CCL28 in the development of post-viral asthma. The Journal of Biological Chemistry. 290: 4528-36. PMID 25556652 DOI: 10.1074/Jbc.M114.627786 |
0.313 |
|
| 2015 |
Fox JC, Nakayama T, Tyler RC, Sander TL, Yoshie O, Volkman BF. Structural and agonist properties of XCL2, the other member of the C-chemokine subfamily. Cytokine. 71: 302-11. PMID 25497737 DOI: 10.1016/J.Cyto.2014.11.010 |
0.494 |
|
| 2015 |
Chadwick AC, Jensen DR, Peterson FC, Volkman BF, Sahoo D. Expression, purification and reconstitution of the C-terminal transmembrane domain of scavenger receptor BI into detergent micelles for NMR analysis. Protein Expression and Purification. 107: 35-42. PMID 25461971 DOI: 10.1016/J.Pep.2014.11.001 |
0.401 |
|
| 2014 |
Smith EW, Liu Y, Getschman AE, Peterson FC, Ziarek JJ, Li R, Volkman BF, Chen Y. Structural analysis of a novel small molecule ligand bound to the CXCL12 chemokine. Journal of Medicinal Chemistry. 57: 9693-9. PMID 25356720 DOI: 10.1021/Jm501194P |
0.758 |
|
| 2014 |
Harvey SR, Porrini M, Konijnenberg A, Clarke DJ, Tyler RC, Langridge-Smith PR, MacPhee CE, Volkman BF, Barran PE. Dissecting the dynamic conformations of the metamorphic protein lymphotactin. The Journal of Physical Chemistry. B. 118: 12348-59. PMID 25259958 DOI: 10.1021/Jp504997K |
0.341 |
|
| 2014 |
Bach HH, Wong YM, Tripathi A, Nevins AM, Gamelli RL, Volkman BF, Byron KL, Majetschak M. Chemokine (C-X-C motif) receptor 4 and atypical chemokine receptor 3 regulate vascular α₁-adrenergic receptor function. Molecular Medicine (Cambridge, Mass.). 20: 435-47. PMID 25032954 DOI: 10.2119/Molmed.2014.00101 |
0.387 |
|
| 2014 |
Verkaar F, van Offenbeek J, van der Lee MM, van Lith LH, Watts AO, Rops AL, Aguilar DC, Ziarek JJ, van der Vlag J, Handel TM, Volkman BF, Proudfoot AE, Vischer HF, Zaman GJ, Smit MJ. Chemokine cooperativity is caused by competitive glycosaminoglycan binding. Journal of Immunology (Baltimore, Md. : 1950). 192: 3908-14. PMID 24639348 DOI: 10.4049/Jimmunol.1302159 |
0.755 |
|
| 2014 |
Tripathi A, Davis JD, Staren DM, Volkman BF, Majetschak M. CXC chemokine receptor 4 signaling upon co-activation with stromal cell-derived factor-1α and ubiquitin. Cytokine. 65: 121-5. PMID 24373940 DOI: 10.1016/J.Cyto.2013.12.008 |
0.398 |
|
| 2014 |
Roy I, Veldkamp CT, Volkman BF, Dwinell MB. Chemokines in colitis: microRNA control. Gut. 63: 1202-4. PMID 24142964 DOI: 10.1136/Gutjnl-2013-305886 |
0.676 |
|
| 2014 |
Guzzo C, Fox J, Lin Y, Volkman B, Lusso P, Miao H. P-D4 Inhibition of HIV-1 by the C-chemokine XCL1/Lymphotactin is dependent on high affinity binding to glycosaminoglycans (GAG) Jaids Journal of Acquired Immune Deficiency Syndromes. 67: 88. DOI: 10.1097/01.Qai.0000456193.00905.5D |
0.31 |
|
| 2013 |
Guzzo C, Fox J, Lin Y, Miao H, Cimbro R, Volkman BF, Fauci AS, Lusso P. The CD8-derived chemokine XCL1/lymphotactin is a conformation-dependent, broad-spectrum inhibitor of HIV-1. Plos Pathogens. 9: e1003852. PMID 24385911 DOI: 10.1371/Journal.Ppat.1003852 |
0.307 |
|
| 2013 |
Anderson DM, Feix JB, Monroe AL, Peterson FC, Volkman BF, Haas AL, Frank DW. Identification of the major ubiquitin-binding domain of the Pseudomonas aeruginosa ExoU A2 phospholipase. The Journal of Biological Chemistry. 288: 26741-52. PMID 23908356 DOI: 10.1074/Jbc.M113.478529 |
0.399 |
|
| 2013 |
Okamoto M, Peterson FC, Defries A, Park SY, Endo A, Nambara E, Volkman BF, Cutler SR. Activation of dimeric ABA receptors elicits guard cell closure, ABA-regulated gene expression, and drought tolerance. Proceedings of the National Academy of Sciences of the United States of America. 110: 12132-7. PMID 23818638 DOI: 10.1073/Pnas.1305919110 |
0.396 |
|
| 2013 |
Ziarek JJ, Getschman AE, Butler SJ, Taleski D, Stephens B, Kufareva I, Handel TM, Payne RJ, Volkman BF. Sulfopeptide probes of the CXCR4/CXCL12 interface reveal oligomer-specific contacts and chemokine allostery. Acs Chemical Biology. 8: 1955-63. PMID 23802178 DOI: 10.1021/Cb400274Z |
0.78 |
|
| 2013 |
Whitney DS, Peterson FC, Kovrigin EL, Volkman BF. Allosteric activation of the Par-6 PDZ via a partial unfolding transition Journal of the American Chemical Society. 135: 9377-9383. PMID 23705660 DOI: 10.1021/Ja400092A |
0.41 |
|
| 2013 |
Tripathi A, Saini V, Marchese A, Volkman BF, Tang WJ, Majetschak M. Modulation of the CXC chemokine receptor 4 agonist activity of ubiquitin through C-terminal protein modification. Biochemistry. 52: 4184-92. PMID 23697661 DOI: 10.1021/Bi400254F |
0.397 |
|
| 2013 |
Ziarek JJ, Veldkamp CT, Zhang F, Murray NJ, Kartz GA, Liang X, Su J, Baker JE, Linhardt RJ, Volkman BF. Heparin oligosaccharides inhibit chemokine (CXC motif) ligand 12 (CXCL12) cardioprotection by binding orthogonal to the dimerization interface, promoting oligomerization, and competing with the chemokine (CXC motif) receptor 4 (CXCR4) N terminus. The Journal of Biological Chemistry. 288: 737-46. PMID 23148226 DOI: 10.1074/Jbc.M112.394064 |
0.817 |
|
| 2013 |
Ducett JK, Peterson FC, Hoover LA, Prunuske AJ, Volkman BF, Craig EA. Unfolding of the C-terminal domain of the J-protein Zuo1 releases autoinhibition and activates Pdr1-dependent transcription. Journal of Molecular Biology. 425: 19-31. PMID 23036859 DOI: 10.1016/J.Jmb.2012.09.020 |
0.374 |
|
| 2012 |
Ziarek JJ, Liu Y, Smith E, Zhang G, Peterson FC, Chen J, Yu Y, Chen Y, Volkman BF, Li R. Fragment-based optimization of small molecule CXCL12 inhibitors for antagonizing the CXCL12/CXCR4 interaction. Current Topics in Medicinal Chemistry. 12: 2727-40. PMID 23368099 DOI: 10.2174/1568026611212240003 |
0.758 |
|
| 2012 |
Ziarek JJ, Volkman BF. NMR in the Analysis of Functional Chemokine Interactions and Drug Discovery. Drug Discovery Today. Technologies. 9: e293-e299. PMID 23166561 DOI: 10.1016/J.Ddtec.2012.04.003 |
0.753 |
|
| 2012 |
Tyler RC, Wieting JC, Peterson FC, Volkman BF. Electrostatic optimization of the conformational energy landscape in a metamorphic protein. Biochemistry. 51: 9067-75. PMID 23102260 DOI: 10.1021/Bi300842J |
0.338 |
|
| 2012 |
Takekoshi T, Ziarek JJ, Volkman BF, Hwang ST. A locked, dimeric CXCL12 variant effectively inhibits pulmonary metastasis of CXCR4-expressing melanoma cells due to enhanced serum stability. Molecular Cancer Therapeutics. 11: 2516-25. PMID 22869557 DOI: 10.1158/1535-7163.Mct-12-0494 |
0.713 |
|
| 2012 |
Elgin ES, Sökmen N, Peterson FC, Volkman BF, Dağ C, Haas AL. E2-binding surface on Uba3 β-grasp domain undergoes a conformational transition. Proteins. 80: 2482-7. PMID 22821745 DOI: 10.1002/Prot.24148 |
0.768 |
|
| 2012 |
Mysinger MM, Weiss DR, Ziarek JJ, Gravel S, Doak AK, Karpiak J, Heveker N, Shoichet BK, Volkman BF. Structure-based ligand discovery for the protein-protein interface of chemokine receptor CXCR4. Proceedings of the National Academy of Sciences of the United States of America. 109: 5517-22. PMID 22431600 DOI: 10.1073/Pnas.1120431109 |
0.753 |
|
| 2011 |
Mosquna A, Peterson FC, Park SY, Lozano-Juste J, Volkman BF, Cutler SR. Potent and selective activation of abscisic acid receptors in vivo by mutational stabilization of their agonist-bound conformation. Proceedings of the National Academy of Sciences of the United States of America. 108: 20838-43. PMID 22139369 DOI: 10.1073/Pnas.1112838108 |
0.396 |
|
| 2011 |
Whitney DS, Peterson FC, Volkman BF. A conformational switch in the CRIB-PDZ module of Par-6 Structure. 19: 1711-1722. PMID 22078569 DOI: 10.1016/J.Str.2011.07.018 |
0.447 |
|
| 2011 |
Drury LJ, Ziarek JJ, Gravel S, Veldkamp CT, Takekoshi T, Hwang ST, Heveker N, Volkman BF, Dwinell MB. Monomeric and dimeric CXCL12 inhibit metastasis through distinct CXCR4 interactions and signaling pathways. Proceedings of the National Academy of Sciences of the United States of America. 108: 17655-60. PMID 21990345 DOI: 10.1073/Pnas.1101133108 |
0.795 |
|
| 2011 |
Johnston CA, Whitney DS, Volkman BF, Doe CQ, Prehoda KE. Conversion of the enzyme guanylate kinase into a mitotic-spindle orienting protein by a single mutation that inhibits GMP-induced closing. Proceedings of the National Academy of Sciences of the United States of America. 108: E973-8. PMID 21990344 DOI: 10.1073/Pnas.1104365108 |
0.336 |
|
| 2011 |
Peterson FC, Chen D, Lytle BL, Rossi MN, Ahel I, Denu JM, Volkman BF. Orphan macrodomain protein (human C6orf130) is an O-acyl-ADP-ribose deacylase: solution structure and catalytic properties. The Journal of Biological Chemistry. 286: 35955-65. PMID 21849506 DOI: 10.1074/Jbc.M111.276238 |
0.416 |
|
| 2011 |
Tyler RC, Murray NJ, Peterson FC, Volkman BF. Native-state interconversion of a metamorphic protein requires global unfolding. Biochemistry. 50: 7077-9. PMID 21776971 DOI: 10.1021/Bi200750K |
0.335 |
|
| 2011 |
Saini V, Staren DM, Ziarek JJ, Nashaat ZN, Campbell EM, Volkman BF, Marchese A, Majetschak M. The CXC chemokine receptor 4 ligands ubiquitin and stromal cell-derived factor-1α function through distinct receptor interactions. The Journal of Biological Chemistry. 286: 33466-77. PMID 21757744 DOI: 10.1074/Jbc.M111.233742 |
0.768 |
|
| 2011 |
Ziarek JJ, Heroux MS, Veldkamp CT, Peterson FC, Volkman BF. Sulfotyrosine recognition as marker for druggable sites in the extracellular space. International Journal of Molecular Sciences. 12: 3740-56. PMID 21747703 DOI: 10.3390/Ijms12063740 |
0.817 |
|
| 2011 |
Sun Q, Tyler RC, Volkman BF, Julian RR. Dynamic interchanging native states of lymphotactin examined by SNAPP-MS. Journal of the American Society For Mass Spectrometry. 22: 399-407. PMID 21472559 DOI: 10.1007/S13361-010-0042-3 |
0.382 |
|
| 2011 |
Paddock C, Lytle BL, Peterson FC, Holyst T, Newman PJ, Volkman BF, Newman DK. Residues within a lipid-associated segment of the PECAM-1 cytoplasmic domain are susceptible to inducible, sequential phosphorylation. Blood. 117: 6012-23. PMID 21464369 DOI: 10.1182/Blood-2010-11-317867 |
0.347 |
|
| 2011 |
Ziarek JJ, Peterson FC, Lytle BL, Volkman BF. Binding site identification and structure determination of protein-ligand complexes by NMR a semiautomated approach. Methods in Enzymology. 493: 241-75. PMID 21371594 DOI: 10.1016/B978-0-12-381274-2.00010-8 |
0.752 |
|
| 2011 |
Goodfellow BJ, Dias JS, Macedo AL, Ferreira GC, Peterson FC, Volkman BF, Duarte ICN. NMR Structure of protoporphyrin-IX bound murine p22HBP Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.2210/Pdb4A1M/Pdb |
0.37 |
|
| 2011 |
Lytle BL, Peterson FC, Volkman BF. Solution structure of human protein C6orf130 in complex with ADP-ribose Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.2210/Pdb2L8R/Pdb |
0.337 |
|
| 2011 |
Drury L, Ziarek J, Volkman BF, Dwinell MB. CXCL12 Oligomerization Dictates Divergent Signaling and Migratory Responses in Intestinal Epithelial Cells Gastroenterology. 140: S-645. DOI: 10.1016/S0016-5085(11)62670-X |
0.741 |
|
| 2010 |
Weiner JJ, Peterson FC, Volkman BF, Cutler SR. Structural and functional insights into core ABA signaling. Current Opinion in Plant Biology. 13: 495-502. PMID 20934900 DOI: 10.1016/J.Pbi.2010.09.007 |
0.366 |
|
| 2010 |
Peterson FC, Burgie ES, Park SY, Jensen DR, Weiner JJ, Bingman CA, Chang CE, Cutler SR, Phillips GN, Volkman BF. Structural basis for selective activation of ABA receptors. Nature Structural & Molecular Biology. 17: 1109-13. PMID 20729860 DOI: 10.1038/Nsmb.1898 |
0.418 |
|
| 2010 |
Olson LJ, Peterson FC, Castonguay A, Bohnsack RN, Kudo M, Gotschall RR, Canfield WM, Volkman BF, Dahms NM. Structural basis for recognition of phosphodiester-containing lysosomal enzymes by the cation-independent mannose 6-phosphate receptor. Proceedings of the National Academy of Sciences of the United States of America. 107: 12493-8. PMID 20615935 DOI: 10.1073/Pnas.1004232107 |
0.376 |
|
| 2010 |
Peterson FC, Baden EM, Owen BA, Volkman BF, Ramirez-Alvarado M. A single mutation promotes amyloidogenicity through a highly promiscuous dimer interface. Structure (London, England : 1993). 18: 563-70. PMID 20462490 DOI: 10.1016/J.Str.2010.02.012 |
0.32 |
|
| 2010 |
Veldkamp CT, Ziarek JJ, Peterson FC, Chen Y, Volkman BF. Targeting SDF-1/CXCL12 with a ligand that prevents activation of CXCR4 through structure-based drug design. Journal of the American Chemical Society. 132: 7242-3. PMID 20459090 DOI: 10.1021/Ja1002263 |
0.811 |
|
| 2010 |
Jensen DR, Woytovich C, Li M, Duvnjak P, Cassidy MS, Frederick RO, Bergeman LF, Peterson FC, Volkman BF. Rapid, robotic, small-scale protein production for NMR screening and structure determination. Protein Science : a Publication of the Protein Society. 19: 570-8. PMID 20073081 DOI: 10.1002/Pro.335 |
0.353 |
|
| 2010 |
Tyler RC, Peterson FC, Volkman BF. Distal interactions within the par3-VE-cadherin complex. Biochemistry. 49: 951-7. PMID 20047332 DOI: 10.1021/Bi9017335 |
0.431 |
|
| 2010 |
Goodfellow BJ, Duarte IC, Macedo AL, Volkman BF, Nunes SG, Moura I, Markley JL, Moura JJ. An NMR structural study of nickel-substituted rubredoxin. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. 15: 409-20. PMID 19997764 DOI: 10.1007/S00775-009-0613-6 |
0.316 |
|
| 2010 |
Volkman BF, Tyler RC, Peterson FC. NMR structure of mouse Par3-PDZ3 in complex with VE-Cadherin C-terminus Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.2210/Pdb2Koh/Pdb |
0.347 |
|
| 2010 |
Olson LJ, Peterson FC, Volkman BF, Dahms NM. SOLUTION STRUCTURE OF CI-MPR ligand-free domain 5 Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.13018/Bmr16772 |
0.344 |
|
| 2010 |
Phillips GN, Primm J, Aceti D, Bingman CA, Frederick R, Makino S, Peterson F, Vojtik F, Wrobel R, Zolnai Z, Volkman B, Fox BG, Markley JL. Technology Development Highlights Generated from the Center for Eukaryotic Structural Genomics Biophysical Journal. 98: 250a-251a. DOI: 10.1016/J.Bpj.2009.12.1362 |
0.358 |
|
| 2009 |
Melcher K, Ng LM, Zhou XE, Soon FF, Xu Y, Suino-Powell KM, Park SY, Weiner JJ, Fujii H, Chinnusamy V, Kovach A, Li J, Wang Y, Li J, Peterson FC, ... ... Volkman BF, et al. A gate-latch-lock mechanism for hormone signalling by abscisic acid receptors. Nature. 462: 602-8. PMID 19898420 DOI: 10.1038/Nature08613 |
0.464 |
|
| 2009 |
Veldkamp CT, Ziarek JJ, Su J, Basnet H, Lennertz R, Weiner JJ, Peterson FC, Baker JE, Volkman BF. Monomeric structure of the cardioprotective chemokine SDF-1/CXCL12. Protein Science : a Publication of the Protein Society. 18: 1359-69. PMID 19551879 DOI: 10.1002/Pro.167 |
0.809 |
|
| 2009 |
Volkman BF, Liu TY, Peterson FC. Chapter 3. Lymphotactin structural dynamics. Methods in Enzymology. 461: 51-70. PMID 19480914 DOI: 10.1016/S0076-6879(09)05403-2 |
0.696 |
|
| 2009 |
Park SY, Fung P, Nishimura N, Jensen DR, Fujii H, Zhao Y, Lumba S, Santiago J, Rodrigues A, Chow TF, Alfred SE, Bonetta D, Finkelstein R, Provart NJ, Desveaux D, ... ... Volkman BF, et al. Abscisic acid inhibits type 2C protein phosphatases via the PYR/PYL family of START proteins. Science (New York, N.Y.). 324: 1068-71. PMID 19407142 DOI: 10.1126/Science.1173041 |
0.37 |
|
| 2009 |
Lytle BL, Song J, de la Cruz NB, Peterson FC, Johnson KA, Bingman CA, Phillips GN, Volkman BF. Structures of two Arabidopsis thaliana major latex proteins represent novel helix-grip folds. Proteins. 76: 237-43. PMID 19326460 DOI: 10.1002/Prot.22396 |
0.388 |
|
| 2009 |
Peterson FC, Volkman BF. Diversity of polyproline recognition by EVH1 domains. Frontiers in Bioscience (Landmark Edition). 14: 833-46. PMID 19273103 DOI: 10.2741/3281 |
0.416 |
|
| 2009 |
Markley JL, Aceti DJ, Bingman CA, Fox BG, Frederick RO, Makino S, Nichols KW, Phillips GN, Primm JG, Sahu SC, Vojtik FC, Volkman BF, Wrobel RL, Zolnai Z. The Center for Eukaryotic Structural Genomics. Journal of Structural and Functional Genomics. 10: 165-79. PMID 19130299 DOI: 10.1007/S10969-008-9057-4 |
0.355 |
|
| 2009 |
Volkman BF, Tyler RC, Peterson FC. Solution structure of humar Par-3b PDZ2 (residues 451-549) Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.2210/Pdb2Kom/Pdb |
0.304 |
|
| 2009 |
Nunes S, Volkman B, Moura J, Moura I, Macedo A, Markley J, Duarte I. NMR Structure of Ni Substitued Desulfovibrio vulgaris Rubredoxin Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.2210/Pdb2Kkd/Pdb |
0.321 |
|
| 2009 |
Volkman BF, Veldkamp CT, Peterson FC. Structure of SDF-1/CXCL12 Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.2210/Pdb2Kec/Pdb |
0.719 |
|
| 2008 |
Seibert C, Veldkamp CT, Peterson FC, Chait BT, Volkman BF, Sakmar TP. Sequential tyrosine sulfation of CXCR4 by tyrosylprotein sulfotransferases Biochemistry. 47: 11251-11262. PMID 18834145 DOI: 10.1021/Bi800965M |
0.77 |
|
| 2008 |
Veldkamp CT, Seibert C, Peterson FC, De La Cruz NB, Haugner JC, Basnet H, Sakmar TP, Volkman BF. Structural basis of CXCR4 sulfotyrosine recognition by the chemokine SDF-1/CXCL12 Science Signaling. 1. PMID 18799424 DOI: 10.1126/Scisignal.1160755 |
0.771 |
|
| 2008 |
Noll L, Peterson FC, Hayes PL, Volkman BF, Sander T. Heterodimer formation of the myeloid zinc finger 1 SCAN domain and association with promyelocytic leukemia nuclear bodies. Leukemia Research. 32: 1582-92. PMID 18472161 DOI: 10.1016/J.Leukres.2008.03.024 |
0.365 |
|
| 2008 |
Tuinstra RL, Peterson FC, Kutlesa S, Elgin ES, Kron MA, Volkman BF. Interconversion between two unrelated protein folds in the lymphotactin native state. Proceedings of the National Academy of Sciences of the United States of America. 105: 5057-62. PMID 18364395 DOI: 10.1073/Pnas.0709518105 |
0.451 |
|
| 2008 |
Hayes PL, Lytle BL, Volkman BF, Peterson FC. The solution structure of ZNF593 from Homo sapiens reveals a zinc finger in a predominantly unstructured protein. Protein Science : a Publication of the Protein Society. 17: 571-6. PMID 18287285 DOI: 10.1110/Ps.073290408 |
0.443 |
|
| 2008 |
de la Cruz NB, Peterson FC, Volkman BF. Solution structure of At3g28950 from Arabidopsis thaliana. Proteins. 71: 546-51. PMID 18214976 DOI: 10.1002/Prot.21936 |
0.383 |
|
| 2008 |
Volkman BF, Veldkamp CT, Peterson FC. Structure of SDF1 in complex with the CXCR4 N-terminus containing sulfotyrosines at postitions 7, 12 and 21 Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.2210/Pdb2K05/Pdb |
0.721 |
|
| 2008 |
Volkman BF, Veldkamp CT, Peterson FC. Structure of SDF1 in complex with the CXCR4 N-terminus containing a sulfotyrosine at postition 21 Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.2210/Pdb2K03/Pdb |
0.721 |
|
| 2008 |
Volkman BF, Veldkamp CT, Peterson FC. Structure of a locked SDF1 dimer Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.2210/Pdb2K01/Pdb |
0.719 |
|
| 2008 |
Volkman BF, Lytle BL, Peterson FC. Solution structure of human protein C6orf130, a putative macro domain Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.2210/Pdb2Jyc/Pdb |
0.344 |
|
| 2007 |
Phillips GN, Fox BG, Markley JL, Volkman BF, Bae E, Bitto E, Bingman CA, Frederick RO, McCoy JG, Lytle BL, Pierce BS, Song J, Twigger SN. Structures of proteins of biomedical interest from the Center for Eukaryotic Structural Genomics. Journal of Structural and Functional Genomics. 8: 73-84. PMID 17786587 DOI: 10.1007/S10969-007-9023-6 |
0.358 |
|
| 2007 |
de la Cruz NB, Peterson FC, Lytle BL, Volkman BF. Solution structure of a membrane-anchored ubiquitin-fold (MUB) protein from Homo sapiens. Protein Science : a Publication of the Protein Society. 16: 1479-84. PMID 17567738 DOI: 10.1110/Ps.072834007 |
0.379 |
|
| 2007 |
Tuinstra RL, Peterson FC, Elgin ES, Pelzek AJ, Volkman BF. An engineered second disulfide bond restricts lymphotactin/XCL1 to a chemokine-like conformation with XCR1 agonist activity. Biochemistry. 46: 2564-73. PMID 17302442 DOI: 10.1021/Bi602365D |
0.462 |
|
| 2007 |
Peterson FC, Deng Q, Zettl M, Prehoda KE, Lim WA, Way M, Volkman BF. Multiple WASP-interacting protein recognition motifs are required for a functional interaction with N-WASP. The Journal of Biological Chemistry. 282: 8446-53. PMID 17229736 DOI: 10.1074/Jbc.M609902200 |
0.425 |
|
| 2007 |
Veldkamp CT, Peterson FC, Hayes PL, Mattmiller JE, Haugner JC, de la Cruz N, Volkman BF. On-column refolding of recombinant chemokines for NMR studies and biological assays. Protein Expression and Purification. 52: 202-9. PMID 17071104 DOI: 10.1016/J.Pep.2006.09.009 |
0.714 |
|
| 2006 |
Peterson FC, Thorpe JA, Harder AG, Volkman BF, Schwarze SR. Structural determinants involved in the regulation of CXCL14/BRAK expression by the 26 S proteasome. Journal of Molecular Biology. 363: 813-22. PMID 16987528 DOI: 10.1016/J.Jmb.2006.08.057 |
0.376 |
|
| 2006 |
Peterson FC, Hayes PL, Waltner JK, Heisner AK, Jensen DR, Sander TL, Volkman BF. Structure of the SCAN domain from the tumor suppressor protein MZF1. Journal of Molecular Biology. 363: 137-47. PMID 16950398 DOI: 10.1016/J.Jmb.2006.07.063 |
0.338 |
|
| 2006 |
Janowiak BE, Hayward MA, Peterson FC, Volkman BF, Griffith OW. γ-glutamylcysteine synthetase-glutathione synthetase: Domain structure and identification of residues important in substrate and glutathione binding Biochemistry. 45: 10461-10473. PMID 16939198 DOI: 10.1021/Bi052483V |
0.332 |
|
| 2006 |
Dias JS, Macedo AL, Ferreira GC, Peterson FC, Volkman BF, Goodfellow BJ. The first structure from the SOUL/HBP family of heme-binding proteins, murine P22HBP. The Journal of Biological Chemistry. 281: 31553-61. PMID 16905545 DOI: 10.1074/Jbc.M605988200 |
0.435 |
|
| 2006 |
Lytle BL, Peterson FC, Tyler EM, Newman CL, Vinarov DA, Markley JL, Volkman BF. Solution structure of Arabidopsis thaliana protein At5g39720.1, a member of the AIG2-like protein family. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 62: 490-3. PMID 16754964 DOI: 10.1107/S1744309106015946 |
0.411 |
|
| 2006 |
Veldkamp CT, Seibert C, Peterson FC, Sakmar TP, Volkman BF. Recognition of a CXCR4 Sulfotyrosine by the Chemokine Stromal Cell-derived Factor-1α (SDF-1α/CXCL12) Journal of Molecular Biology. 359: 1400-1409. PMID 16725153 DOI: 10.1016/J.Jmb.2006.04.052 |
0.758 |
|
| 2006 |
Volkman BF, Cruz NBdl, Lytle BL, Peterson FC. Solution structure of Arabidopsis thaliana protein At1g70830, a member of the major latex protein family Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.2210/Pdb2I9Y/Pdb |
0.311 |
|
| 2005 |
Dias JS, Macedo AL, Ferreira GC, Jeanty N, Taketani S, Goodfellow BJ, Peterson FC, Volkman BF. 1H, 15N and 13C resonance assignments of the heme-binding protein murine p22HBP. Journal of Biomolecular Nmr. 32: 338. PMID 16211492 DOI: 10.1007/S10858-005-0470-8 |
0.355 |
|
| 2005 |
Waltner JK, Peterson FC, Lytle BL, Volkman BF. Structure of the B3 domain from Arabidopsis thaliana protein At1g16640. Protein Science : a Publication of the Protein Society. 14: 2478-83. PMID 16081658 DOI: 10.1110/Ps.051606305 |
0.378 |
|
| 2005 |
Peterson FC, Lytle BL, Sampath S, Vinarov D, Tyler E, Shahan M, Markley JL, Volkman BF. Solution structure of thioredoxin h1 from Arabidopsis thaliana. Protein Science : a Publication of the Protein Society. 14: 2195-200. PMID 15987893 DOI: 10.1110/Ps.051477905 |
0.376 |
|
| 2005 |
Tyler RC, Aceti DJ, Bingman CA, Cornilescu CC, Fox BG, Frederick RO, Jeon WB, Lee MS, Newman CS, Peterson FC, Phillips GN, Shahan MN, Singh S, Song J, Sreenath HK, ... ... Volkman BF, et al. Comparison of cell-based and cell-free protocols for producing target proteins from the Arabidopsis thaliana genome for structural studies. Proteins. 59: 633-43. PMID 15789406 DOI: 10.1002/Prot.20436 |
0.376 |
|
| 2005 |
Veldkamp CT, Peterson FC, Pelzek AJ, Volkman BF. The monomer-dimer equilibrium of stromal cell-derived factor-1 (CXCL 12) is altered by pH, phosphate, sulfate, and heparin. Protein Science : a Publication of the Protein Society. 14: 1071-81. PMID 15741341 DOI: 10.1110/Ps.041219505 |
0.747 |
|
| 2004 |
Vinarov DA, Lytle BL, Peterson FC, Tyler EM, Volkman BF, Markley JL. Cell-free protein production and labeling protocol for NMR-based structural proteomics. Nature Methods. 1: 149-53. PMID 15782178 DOI: 10.1038/Nmeth716 |
0.366 |
|
| 2004 |
Skjeldal L, Peterson FC, Doreleijers JF, Moe LA, Pikus JD, Westler WM, Markley JL, Volkman BF, Fox BG. Solution structure of T4moC, the Rieske ferredoxin component of the toluene 4-monooxygenase complex. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. 9: 945-53. PMID 15452777 DOI: 10.1007/S00775-004-0594-4 |
0.382 |
|
| 2004 |
Lytle BL, Peterson FC, Qiu SH, Luo M, Zhao Q, Markley JL, Volkman BF. Solution structure of a ubiquitin-like domain from tubulin-binding cofactor B. The Journal of Biological Chemistry. 279: 46787-93. PMID 15364906 DOI: 10.1074/Jbc.M409422200 |
0.41 |
|
| 2004 |
Zhao Q, Frederick R, Seder K, Thao S, Sreenath H, Peterson F, Volkman BF, Markley JL, Fox BG. Production in two-liter beverage bottles of proteins for NMR structure determination labeled with either 15N- or 13C-15N. Journal of Structural and Functional Genomics. 5: 87-93. PMID 15263847 DOI: 10.1023/B:Jsfg.0000029205.65813.42 |
0.35 |
|
| 2004 |
Peterson FC, Penkert RR, Volkman BF, Prehoda KE. Cdc42 regulates the Par-6 PDZ domain through an allosteric CRIB-PDZ transition. Molecular Cell. 13: 665-76. PMID 15023337 DOI: 10.1016/S1097-2765(04)00086-3 |
0.417 |
|
| 2004 |
Lytle BL, Peterson FC, Kjer KL, Frederick RO, Zhao Q, Thao S, Bingman C, Johnson KA, Phillips GN, Volkman BF. Structure of the hypothetical protein At3g17210 from Arabidopsis thaliana. Journal of Biomolecular Nmr. 28: 397-400. PMID 14872131 DOI: 10.1023/B:Jnmr.0000015385.54050.19 |
0.353 |
|
| 2004 |
Peterson FC, Elgin ES, Nelson TJ, Zhang F, Hoeger TJ, Linhardt RJ, Volkman BF. Identification and characterization of a glycosaminoglycan recognition element of the C chemokine lymphotactin. The Journal of Biological Chemistry. 279: 12598-604. PMID 14707146 DOI: 10.1074/Jbc.M311633200 |
0.443 |
|
| 2004 |
Lytle B, Peterson F, Volkman B, Markley J. Structure of At3g01050.1, a ubiquitin-fold protein from Arabidopsis thaliana Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.2210/Pdb1Se9/Pdb |
0.363 |
|
| 2003 |
Gardino AK, Volkman BF, Cho HS, Lee SY, Wemmer DE, Kern D. The NMR solution structure of BeF(3)(-)-activated Spo0F reveals the conformational switch in a phosphorelay system. Journal of Molecular Biology. 331: 245-54. PMID 12875849 DOI: 10.1016/S0022-2836(03)00733-2 |
0.723 |
|
| 2003 |
Cook CR, Kung G, Peterson FC, Volkman BF, Lei M. A novel zinc finger is required for Mcm10 homocomplex assembly. The Journal of Biological Chemistry. 278: 36051-8. PMID 12844493 DOI: 10.1074/Jbc.M306049200 |
0.302 |
|
| 2003 |
Aceti DJ, Blommel PG, Endo Y, Fox BG, Frederick RO, Hegeman AD, Jeon WB, Kimball TL, Lee JM, Newman CS, Peterson FC, Sawasaki T, Seder KD, Sussman MR, Ulrich EL, ... ... Volkman BF, et al. Role of Nucleic Acid and Protein Manipulation Technologies in High-throughput Structural Biology Efforts Biopolymers Online. DOI: 10.1002/3527600035.Bpol8017 |
0.334 |
|
| 2002 |
Volkman BF, Prehoda KE, Scott JA, Peterson FC, Lim WA. Structure of the N-WASP EVH1 domain-WIP complex: insight into the molecular basis of Wiskott-Aldrich Syndrome. Cell. 111: 565-76. PMID 12437929 DOI: 10.1016/S0092-8674(02)01076-0 |
0.434 |
|
| 2002 |
Kuloğlu ES, McCaslin DR, Markley JL, Volkman BF. Structural rearrangement of human lymphotactin, a C chemokine, under physiological solution conditions. The Journal of Biological Chemistry. 277: 17863-70. PMID 11889129 DOI: 10.1074/Jbc.M200402200 |
0.347 |
|
| 2002 |
Skjeldal L, Gran L, Sletten K, Volkman BF. Refined structure and metal binding site of the kalata B1 peptide. Archives of Biochemistry and Biophysics. 399: 142-8. PMID 11888199 DOI: 10.1006/Abbi.2002.2769 |
0.365 |
|
| 2001 |
Kuloglu ES, McCaslin DR, Kitabwalla M, Pauza CD, Markley JL, Volkman BF. Monomeric solution structure of the prototypical 'C' chemokine lymphotactin. Biochemistry. 40: 12486-96. PMID 11601972 DOI: 10.1021/Bi011106P |
0.416 |
|
| 2001 |
Volkman BF, Zhang Q, Debabov DV, Rivera E, Kresheck GC, Neuhaus FC. Biosynthesis of D-alanyl-lipoteichoic acid: the tertiary structure of apo-D-alanyl carrier protein. Biochemistry. 40: 7964-72. PMID 11434765 DOI: 10.1021/Bi010355A |
0.41 |
|
| 2001 |
Clark KD, Volkman BF, Thoetkiattikul H, Hayakawa Y, Strand MR. N-terminal residues of plasmatocyte-spreading peptide possess specific determinants required for biological activity. The Journal of Biological Chemistry. 276: 37431-5. PMID 11432871 DOI: 10.1074/Jbc.M105235200 |
0.361 |
|
| 2001 |
Clark KD, Volkman BF, Thoetkiattikul H, King D, Hayakawa Y, Strand MR. Alanine-scanning mutagenesis of plasmatocyte spreading peptide identifies critical residues for biological activity. The Journal of Biological Chemistry. 276: 18491-6. PMID 11279096 DOI: 10.1074/Jbc.M100579200 |
0.352 |
|
| 2001 |
Lytle BL, Volkman BF, Westler WM, Heckman MP, Wu JH. Solution structure of a type I dockerin domain, a novel prokaryotic, extracellular calcium-binding domain. Journal of Molecular Biology. 307: 745-53. PMID 11273698 DOI: 10.1006/Jmbi.2001.4522 |
0.408 |
|
| 2001 |
Volkman BF, Lipson D, Wemmer DE, Kern D. Two-state allosteric behavior in a single-domain signaling protein. Science (New York, N.Y.). 291: 2429-33. PMID 11264542 DOI: 10.1126/Science.291.5512.2429 |
0.652 |
|
| 2000 |
Lytle BL, Volkman BF, Westler WM, Wu JH. Secondary structure and calcium-induced folding of the Clostridium thermocellum dockerin domain determined by NMR spectroscopy. Archives of Biochemistry and Biophysics. 379: 237-44. PMID 10898940 DOI: 10.1006/Abbi.2000.1882 |
0.412 |
|
| 1999 |
Kern D, Volkman BF, Luginbühl P, Nohaile MJ, Kustu S, Wemmer DE. Structure of a transiently phosphorylated switch in bacterial signal transduction. Nature. 402: 894-8. PMID 10622255 DOI: 10.1038/47273 |
0.686 |
|
| 1999 |
Babu CR, Volkman BF, Bullerjahn GS. NMR solution structure of plastocyanin from the photosynthetic prokaryote, Prochlorothrix hollandica Biochemistry. 38: 4988-4995. PMID 10213601 DOI: 10.1021/Bi983024F |
0.41 |
|
| 1999 |
Volkman BF, Anderson ME, Clark KD, Hayakawa Y, Strand MR, Markley JL. Structure of the insect cytokine peptide plasmatocyte-spreading peptide 1 from Pseudoplusia includens. The Journal of Biological Chemistry. 274: 4493-6. PMID 9988679 DOI: 10.1074/Jbc.274.8.4493 |
0.429 |
|
| 1999 |
Volkman BF, Wilkens SJ, Lee AL, Xia B, Westler WM, Beger R, Markley JL. Redox-dependent magnetic alignment of Clostridium pasteurianum rubredoxin: Measurement of magnetic susceptibility anisotropy and prediction of pseudocontact shift contributions Journal of the American Chemical Society. 121: 4677-4683. DOI: 10.1021/Ja990079B |
0.469 |
|
| 1998 |
Volkman BF, Alam SL, Satterlee JD, Markley JL. Solution structure and backbone dynamics of component IV Glycera dibranchiata monomeric hemoglobin-CO Biochemistry. 37: 10906-10919. PMID 9692983 DOI: 10.1021/Bi980810B |
0.352 |
|
| 1998 |
Alam SL, Volkman BF, Markley JL, Satterlee JD. Detailed NMR analysis of the heme-protein interactions in component IV Glycera dibranchiata monomeric hemoglobin-CO Journal of Biomolecular Nmr. 11: 119-133. PMID 9679291 DOI: 10.1023/A:1008202621725 |
0.384 |
|
| 1998 |
Xia B, Volkman BF, Markley JL. Evidence for oxidation-state-dependent conformational changes in human ferredoxin from multinuclear, multidimensional NMR spectroscopy. Biochemistry. 37: 3965-73. PMID 9521718 DOI: 10.1021/Bi972722H |
0.345 |
|
| 1998 |
Wilkens SJ, Xia B, Volkman BF, Weinhold F, Markley JL, Westler WM. Inadequacies of the Point-Dipole Approximation for Describing Electron−Nuclear Interactions in Paramagnetic Proteins: Hybrid Density Functional Calculations and the Analysis of NMR Relaxation of High-Spin Iron(III) Rubredoxin The Journal of Physical Chemistry B. 102: 8300-8305. DOI: 10.1021/Jp982018Q |
0.301 |
|
| 1997 |
Chivers PT, Prehoda KE, Volkman BF, Kim BM, Markley JL, Raines RT. Microscopic pKa values of Escherichia coli thioredoxin. Biochemistry. 36: 14985-91. PMID 9398223 DOI: 10.1021/Bi970071J |
0.352 |
|
| 1997 |
Lee AL, Volkman BF, Robertson SA, Rudner DZ, Barbash DA, Cline TW, Kanaar R, Rio DC, Wemmer DE. Chemical shift mapping of the RNA-binding interface of the multiple-RBD protein sex-lethal. Biochemistry. 36: 14306-17. PMID 9398148 DOI: 10.1021/Bi970830Y |
0.753 |
|
| 1997 |
Volkman BF, Wemmer DE. Deletion of a single amino acid changes the folding of an apamin hybrid sequence peptide to that of endothelin. Biopolymers. 41: 451-60. PMID 9080780 DOI: 10.1002/(Sici)1097-0282(19970405)41:4<451::Aid-Bip9>3.0.Co;2-L |
0.512 |
|
| 1995 |
Volkman BF, Nohaile MJ, Amy NK, Kustu S, Wemmer DE. Three-dimensional solution structure of the N-terminal receiver domain of NTRC. Biochemistry. 34: 1413-24. PMID 7827089 DOI: 10.1021/Bi00004A036 |
0.593 |
|
| 1994 |
Geierstanger BH, Volkman BF, Kremer W, Wemmer DE. Short peptide fragments derived from HMG-I/Y proteins bind specifically to the minor groove of DNA. Biochemistry. 33: 5347-55. PMID 8172908 DOI: 10.1021/Bi00183A043 |
0.533 |
|
| 1992 |
Ellman JA, Volkman BF, Mendel D, Schulz PG, Wemmer DE. Site-specific isotopic labeling of proteins for NMR studies Journal of the American Chemical Society. 114: 7959-7961. DOI: 10.1021/Ja00046A080 |
0.539 |
|
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