Year |
Citation |
Score |
2021 |
O'Connor JB, Mottlowitz MM, Wagner BD, Boyne KL, Stevens MJ, Robertson CE, Harris JK, Laguna TA. Divergence of bacterial communities in the lower airways of CF patients in early childhood. Plos One. 16: e0257838. PMID 34613995 DOI: 10.1371/journal.pone.0257838 |
0.486 |
|
2020 |
Stanish LF, Sherwood OA, Lackey G, Osborn S, Robertson CE, Harris JK, Pace N, Ryan JN. Microbial and Biogeochemical Indicators of Methane in Groundwater Aquifers of the Denver Basin, Colorado. Environmental Science & Technology. PMID 33296185 DOI: 10.1021/acs.est.0c04228 |
0.509 |
|
2020 |
Kimber C, Zhang S, Johnson C, West RE, Prokopienko AJ, Mahnken JD, Yu AS, Hoofnagle AN, Ir D, Robertson CE, Miyazaki M, Chonchol M, Jovanovich A, Kestenbaum B, Frank DN, et al. Randomized, Placebo-controlled Trial of Rifaximin Therapy for Lowering Gut-derived Cardiovascular Toxins and Inflammation in Chronic Kidney Disease Kidney. DOI: 10.34067/Kid.0003942020 |
0.305 |
|
2019 |
Harris JK, Wagner BD, Zemanick ET, Robertson CE, Stevens MJ, Heltshe SL, Rowe SM, Sagel SD. Changes in Airway Microbiome and Inflammation with Ivacaftor Treatment in Patients with Cystic Fibrosis and the G551D Mutation. Annals of the American Thoracic Society. PMID 31604026 DOI: 10.1513/Annalsats.201907-493Oc |
0.5 |
|
2019 |
Li E, Zhang Y, Tian X, Wang X, Gathungu G, Wolber A, Shiekh SS, Sartor RB, Davidson NO, Ciorba MA, Zhu W, Nelson LM, Robertson CE, Frank DN. Influence of Crohn's disease related polymorphisms in innate immune function on ileal microbiome. Plos One. 14: e0213108. PMID 30818349 DOI: 10.1371/Journal.Pone.0213108 |
0.309 |
|
2018 |
Regner EH, Ohri N, Stahly A, Gerich ME, Fennimore BP, Ir D, Jubair WK, Görg C, Siebert J, Robertson CE, Caplan L, Frank DN, Kuhn KA. Functional intraepithelial lymphocyte changes in inflammatory bowel disease and spondyloarthritis have disease specific correlations with intestinal microbiota. Arthritis Research & Therapy. 20: 149. PMID 30029674 DOI: 10.1186/S13075-018-1639-3 |
0.302 |
|
2018 |
Hull NM, Rosenblum JS, Robertson CE, Harris JK, Linden KG. Succession of toxicity and microbiota in hydraulic fracturing flowback and produced water in the Denver-Julesburg Basin. The Science of the Total Environment. 644: 183-192. PMID 29981518 DOI: 10.1016/J.Scitotenv.2018.06.067 |
0.567 |
|
2018 |
Wagner BD, Grunwald GK, Zerbe GO, Mikulich-Gilbertson SK, Robertson CE, Zemanick ET, Harris JK. On the Use of Diversity Measures in Longitudinal Sequencing Studies of Microbial Communities. Frontiers in Microbiology. 9: 1037. PMID 29872428 DOI: 10.3389/Fmicb.2018.01037 |
0.567 |
|
2018 |
Nycz BT, Dominguez SR, Friedman D, Hilden JM, Ir D, Robertson CE, Frank DN. Evaluation of bloodstream infections, Clostridium difficile infections, and gut microbiota in pediatric oncology patients. Plos One. 13: e0191232. PMID 29329346 DOI: 10.1371/Journal.Pone.0191232 |
0.319 |
|
2017 |
Wagner BD, Sontag MK, Harris JK, Miller JI, Morrow L, Robertson CE, Stephens MJ, Poindexter BB, Abman SH, Mourani PM. Prenatal complications are associated with the postnatal airway host response and microbiota in intubated preterm infants. The Journal of Maternal-Fetal & Neonatal Medicine : the Official Journal of the European Association of Perinatal Medicine, the Federation of Asia and Oceania Perinatal Societies, the International Society of Perinatal Obstetricians. 1-211. PMID 29157044 DOI: 10.1080/14767058.2017.1407310 |
0.516 |
|
2017 |
Zemanick ET, Wagner BD, Robertson CE, Ahrens RC, Chmiel JF, Clancy JP, Gibson RL, Harris WT, Kurland G, Laguna TA, McColley SA, McCoy K, Retsch-Bogart G, Sobush KT, Zeitlin PL, et al. Airway microbiota across age and disease spectrum in cystic fibrosis. The European Respiratory Journal. 50. PMID 29146601 DOI: 10.1183/13993003.00832-2017 |
0.547 |
|
2017 |
Williamson KM, Wagner BD, Robertson CE, Johnson EJ, Zemanick ET, Harris JK. Impact of enzymatic digestion on bacterial community composition in CF airway samples. Peerj. 5: e3362. PMID 28584706 DOI: 10.7717/Peerj.3362 |
0.564 |
|
2017 |
Goleva E, Harris JK, Robertson CE, Jackson LP, Martin RJ, Leung DYM. Airway microbiome and responses to corticosteroids in corticosteroid-resistant asthma patients treated with acid suppression medications. The Journal of Allergy and Clinical Immunology. PMID 28477847 DOI: 10.1016/J.Jaci.2017.03.011 |
0.482 |
|
2017 |
Hull NM, Holinger EP, Ross KA, Robertson CE, Harris JK, Stevens MJ, Pace NR. Longitudinal and Source-to-Tap New Orleans, LA, USA Drinking Water Microbiology. Environmental Science & Technology. PMID 28296394 DOI: 10.1021/Acs.Est.6B06064 |
0.663 |
|
2017 |
Wagner BD, Sontag MK, Harris JK, Miller JI, Morrow L, Robertson CE, Stephens M, Poindexter BB, Abman SH, Mourani PM. Airway Microbial Community Turnover Differs by BPD Severity in Ventilated Preterm Infants. Plos One. 12: e0170120. PMID 28129336 DOI: 10.1371/Journal.Pone.0170120 |
0.538 |
|
2016 |
Laguna TA, Wagner BD, Williams CB, Stevens MJ, Robertson CE, Welchlin CW, Moen CE, Zemanick ET, Harris JK. Airway Microbiota in Bronchoalveolar Lavage Fluid from Clinically Well Infants with Cystic Fibrosis. Plos One. 11: e0167649. PMID 27930727 DOI: 10.1371/Journal.Pone.0167649 |
0.526 |
|
2016 |
Ramakrishnan VR, Gitomer S, Kofonow JM, Robertson CE, Frank DN. Investigation of sinonasal microbiome spatial organization in chronic rhinosinusitis. International Forum of Allergy & Rhinology. PMID 27627048 DOI: 10.1002/Alr.21854 |
0.327 |
|
2016 |
Stanish LF, Hull NM, Robertson CE, Harris JK, Stevens MJ, Spear JR, Pace NR. Factors Influencing Bacterial Diversity and Community Composition in Municipal Drinking Waters in the Ohio River Basin, USA. Plos One. 11: e0157966. PMID 27362708 DOI: 10.1371/Journal.Pone.0157966 |
0.752 |
|
2016 |
Brumbaugh DE, Arruda J, Robbins K, Ir D, Santorico SA, Robertson CE, Frank DN. Mode of Delivery Determines Neonatal Pharyngeal Bacterial Composition and Early Intestinal Colonization. Journal of Pediatric Gastroenterology and Nutrition. PMID 27035381 DOI: 10.1097/Mpg.0000000000001124 |
0.322 |
|
2016 |
Hauser LJ, Ir D, Kingdom TT, Robertson CE, Frank DN, Ramakrishnan VR. Evaluation of bacterial transmission to the paranasal sinuses through sinus irrigation. International Forum of Allergy & Rhinology. PMID 26990369 DOI: 10.1002/Alr.21755 |
0.34 |
|
2016 |
Johnson EJ, Zemanick ET, Accurso FJ, Wagner BD, Robertson CE, Harris JK. Molecular Identification of Staphylococcus aureus in Airway Samples from Children with Cystic Fibrosis. Plos One. 11: e0147643. PMID 26808658 DOI: 10.1371/Journal.Pone.0147643 |
0.56 |
|
2015 |
Handorean A, Robertson CE, Harris JK, Frank D, Hull N, Kotter C, Stevens MJ, Baumgardner D, Pace NR, Hernandez M. Microbial aerosol liberation from soiled textiles isolated during routine residuals handling in a modern health care setting. Microbiome. 3: 72. PMID 26646166 DOI: 10.1186/S40168-015-0132-3 |
0.65 |
|
2015 |
Son JS, Khair S, Pettet DW, Ouyang N, Tian X, Zhang Y, Zhu W, Mackenzie GG, Robertson CE, Ir D, Frank DN, Rigas B, Li E. Altered Interactions between the Gut Microbiome and Colonic Mucosa Precede Polyposis in APCMin/+ Mice. Plos One. 10: e0127985. PMID 26121046 DOI: 10.1371/Journal.Pone.0127985 |
0.331 |
|
2015 |
Alkanani AK, Hara N, Gottlieb PA, Ir D, Robertson CE, Wagner BD, Frank DN, Zipris D. Alterations in Intestinal Microbiota Correlate With Susceptibility to Type 1 Diabetes. Diabetes. 64: 3510-20. PMID 26068542 DOI: 10.2337/Db14-1847 |
0.331 |
|
2015 |
Harris JK, Fang R, Wagner BD, Choe HN, Kelly CJ, Schroeder S, Moore W, Stevens MJ, Yeckes A, Amsden K, Kagalwalla AF, Zalewski A, Hirano I, Gonsalves N, Henry LN, ... ... Robertson CE, et al. Esophageal microbiome in eosinophilic esophagitis. Plos One. 10: e0128346. PMID 26020633 DOI: 10.1371/Journal.Pone.0128346 |
0.654 |
|
2015 |
Baron JL, Harris JK, Holinger EP, Duda S, Stevens MJ, Robertson CE, Ross KA, Pace NR, Stout JE. Effect of monochloramine treatment on the microbial ecology of Legionella and associated bacterial populations in a hospital hot water system. Systematic and Applied Microbiology. 38: 198-205. PMID 25840824 DOI: 10.1016/J.Syapm.2015.02.006 |
0.738 |
|
2015 |
Ling AL, Robertson CE, Harris JK, Frank DN, Kotter CV, Stevens MJ, Pace NR, Hernandez MT. High-resolution microbial community succession of microbially induced concrete corrosion in working sanitary manholes. Plos One. 10: e0116400. PMID 25748024 DOI: 10.1371/Journal.Pone.0116400 |
0.764 |
|
2015 |
Flass T, Tong S, Frank DN, Wagner BD, Robertson CE, Kotter CV, Sokol RJ, Zemanick E, Accurso F, Hoffenberg EJ, Narkewicz MR. Intestinal lesions are associated with altered intestinal microbiome and are more frequent in children and young adults with cystic fibrosis and cirrhosis. Plos One. 10: e0116967. PMID 25658710 DOI: 10.1371/Journal.Pone.0116967 |
0.301 |
|
2015 |
Hull NM, Reens AL, Robertson CE, Stanish LF, Harris JK, Stevens MJ, Frank DN, Kotter C, Pace NR. Molecular analysis of single room humidifier bacteriology. Water Research. 69: 318-27. PMID 25574772 DOI: 10.1016/J.Watres.2014.11.024 |
0.682 |
|
2015 |
Zemanick ET, Wagner BD, Robertson CE, Stevens MJ, Szefler SJ, Accurso FJ, Sagel SD, Harris JK. Assessment of airway microbiota and inflammation in cystic fibrosis using multiple sampling methods. Annals of the American Thoracic Society. 12: 221-9. PMID 25474078 DOI: 10.1513/Annalsats.201407-310Oc |
0.569 |
|
2014 |
Lim YW, Haynes M, Furlan M, Robertson CE, Harris JK, Rohwer F. Purifying the impure: sequencing metagenomes and metatranscriptomes from complex animal-associated samples. Journal of Visualized Experiments : Jove. PMID 25549184 DOI: 10.3791/52117 |
0.576 |
|
2014 |
Barton HA, Giarrizzo JG, Suarez P, Robertson CE, Broering MJ, Banks ED, Vaishampayan PA, Venkateswaran K. Microbial diversity in a Venezuelan orthoquartzite cave is dominated by the Chloroflexi (Class Ktedonobacterales) and Thaumarchaeota Group I.1c. Frontiers in Microbiology. 5: 615. PMID 25505450 DOI: 10.3389/Fmicb.2014.00615 |
0.39 |
|
2014 |
Rutebemberwa A, Stevens MJ, Perez MJ, Smith LP, Sanders L, Cosgrove G, Robertson CE, Tuder RM, Harris JK. Novosphingobium and its potential role in chronic obstructive pulmonary diseases: insights from microbiome studies. Plos One. 9: e111150. PMID 25340840 DOI: 10.1371/Journal.Pone.0111150 |
0.525 |
|
2014 |
Harris JK, El Kasmi KC, Anderson AL, Devereaux MW, Fillon SA, Robertson CE, Wagner BD, Stevens MJ, Pace NR, Sokol RJ. Specific microbiome changes in a mouse model of parenteral nutrition associated liver injury and intestinal inflammation. Plos One. 9: e110396. PMID 25329595 DOI: 10.1371/Journal.Pone.0110396 |
0.642 |
|
2014 |
Ling AL, Robertson CE, Harris JK, Frank DN, Kotter CV, Stevens MJ, Pace NR, Hernandez MT. Carbon dioxide and hydrogen sulfide associations with regional bacterial diversity patterns in microbially induced concrete corrosion. Environmental Science & Technology. 48: 7357-64. PMID 24842376 DOI: 10.1021/Es500763E |
0.768 |
|
2014 |
Holinger EP, Ross KA, Robertson CE, Stevens MJ, Harris JK, Pace NR. Molecular analysis of point-of-use municipal drinking water microbiology. Water Research. 49: 225-35. PMID 24333849 DOI: 10.1016/J.Watres.2013.11.027 |
0.735 |
|
2014 |
Holinger EP, Ross KA, Robertson CE, Stevens MJ, Harris JK, Pace NR. Erratum to “Molecular analysis of point-of-use drinking water microbiology” [Water Res. 49 (2014 Feb 1) 225–235] Water Research. 56: 367. DOI: 10.1016/J.Watres.2014.03.021 |
0.695 |
|
2013 |
Ramakrishnan VR, Feazel LM, Gitomer SA, Ir D, Robertson CE, Frank DN. The microbiome of the middle meatus in healthy adults. Plos One. 8: e85507. PMID 24386477 DOI: 10.1371/Journal.Pone.0085507 |
0.368 |
|
2013 |
Goleva E, Jackson LP, Harris JK, Robertson CE, Sutherland ER, Hall CF, Good JT, Gelfand EW, Martin RJ, Leung DY. The effects of airway microbiome on corticosteroid responsiveness in asthma. American Journal of Respiratory and Critical Care Medicine. 188: 1193-201. PMID 24024497 DOI: 10.1164/Rccm.201304-0775Oc |
0.478 |
|
2013 |
Robertson CE, Harris JK, Wagner BD, Granger D, Browne K, Tatem B, Feazel LM, Park K, Pace NR, Frank DN. Explicet: graphical user interface software for metadata-driven management, analysis and visualization of microbiome data. Bioinformatics (Oxford, England). 29: 3100-1. PMID 24021386 DOI: 10.1093/Bioinformatics/Btt526 |
0.627 |
|
2013 |
Zemanick ET, Harris JK, Wagner BD, Robertson CE, Sagel SD, Stevens MJ, Accurso FJ, Laguna TA. Inflammation and airway microbiota during cystic fibrosis pulmonary exacerbations. Plos One. 8: e62917. PMID 23646159 DOI: 10.1371/Journal.Pone.0062917 |
0.546 |
|
2013 |
Robertson CE, Baumgartner LK, Harris JK, Peterson KL, Stevens MJ, Frank DN, Pace NR. Culture-independent analysis of aerosol microbiology in a metropolitan subway system. Applied and Environmental Microbiology. 79: 3485-93. PMID 23542619 DOI: 10.1128/Aem.00331-13 |
0.697 |
|
2013 |
Hara N, Alkanani AK, Ir D, Robertson CE, Wagner BD, Frank DN, Zipris D. The role of the intestinal microbiota in type 1 diabetes. Clinical Immunology (Orlando, Fla.). 146: 112-9. PMID 23314185 DOI: 10.1016/J.Clim.2012.12.001 |
0.3 |
|
2013 |
Harris JK, Caporaso JG, Walker JJ, Spear JR, Gold NJ, Robertson CE, Hugenholtz P, Goodrich J, McDonald D, Knights D, Marshall P, Tufo H, Knight R, Pace NR. Phylogenetic stratigraphy in the Guerrero Negro hypersaline microbial mat. The Isme Journal. 7: 50-60. PMID 22832344 DOI: 10.1038/Ismej.2012.79 |
0.756 |
|
2013 |
De Evgrafov MR, Kõll P, Frank DN, Baumgartner LK, Robertson CE, Hernández MT, Pace NR. Molecular analysis of bacterial and circovirus bioaerosols in concentrated animal feeding operations Aerosol Science and Technology. 47: 755-766. DOI: 10.1080/02786826.2013.789477 |
0.486 |
|
2012 |
Fillon SA, Harris JK, Wagner BD, Kelly CJ, Stevens MJ, Moore W, Fang R, Schroeder S, Masterson JC, Robertson CE, Pace NR, Ackerman SJ, Furuta GT. Novel device to sample the esophageal microbiome--the esophageal string test. Plos One. 7: e42938. PMID 22957025 DOI: 10.1371/Journal.Pone.0042938 |
0.668 |
|
2012 |
Zhang T, DeSimone RA, Jiao X, Rohlf FJ, Zhu W, Gong QQ, Hunt SR, Dassopoulos T, Newberry RD, Sodergren E, Weinstock G, Robertson CE, Frank DN, Li E. Host genes related to paneth cells and xenobiotic metabolism are associated with shifts in human ileum-associated microbial composition. Plos One. 7: e30044. PMID 22719822 DOI: 10.1371/Journal.Pone.0030044 |
0.374 |
|
2012 |
Li E, Hamm CM, Gulati AS, Sartor RB, Chen H, Wu X, Zhang T, Rohlf FJ, Zhu W, Gu C, Robertson CE, Pace NR, Boedeker EC, Harpaz N, Yuan J, et al. Inflammatory bowel diseases phenotype, C. difficile and NOD2 genotype are associated with shifts in human ileum associated microbial composition. Plos One. 7: e26284. PMID 22719818 DOI: 10.1371/Journal.Pone.0026284 |
0.572 |
|
2012 |
Keely S, Kelly CJ, Weissmueller T, Burgess A, Wagner BD, Robertson CE, Harris JK, Colgan SP. Activated fluid transport regulates bacterial-epithelial interactions and significantly shifts the murine colonic microbiome. Gut Microbes. 3: 250-60. PMID 22614705 DOI: 10.4161/Gmic.20529 |
0.553 |
|
2012 |
Xiong X, Frank DN, Robertson CE, Hung SS, Markle J, Canty AJ, McCoy KD, Macpherson AJ, Poussier P, Danska JS, Parkinson J. Generation and analysis of a mouse intestinal metatranscriptome through Illumina based RNA-sequencing. Plos One. 7: e36009. PMID 22558305 DOI: 10.1371/Journal.Pone.0036009 |
0.359 |
|
2012 |
Ross KA, Feazel LM, Robertson CE, Fathepure BZ, Wright KE, Turk-Macleod RM, Chan MM, Held NL, Spear JR, Pace NR. Phototrophic phylotypes dominate mesothermal microbial mats associated with hot springs in Yellowstone National Park. Microbial Ecology. 64: 162-70. PMID 22327269 DOI: 10.1007/S00248-012-0012-3 |
0.764 |
|
2012 |
Feazel LM, Robertson CE, Ramakrishnan VR, Frank DN. Microbiome complexity and Staphylococcus aureus in chronic rhinosinusitis. The Laryngoscope. 122: 467-72. PMID 22253013 DOI: 10.1002/Lary.22398 |
0.347 |
|
2012 |
Nelson AW, Feazel LM, Robertson CE, Spear JR, Frank DN. Microbiological water quality monitoring in a resource-limited urban area: a study in Cameroon, Africa Journal of Public Health in Africa. 3: 19. DOI: 10.4081/Jphia.2012.E19 |
0.623 |
|
2012 |
Li E, Hamm CM, Gulati AS, Sartor RB, Chen H, Wu X, Zhang T, Rohlf FJ, Zhu W, Gu C, Robertson CE, Pace NR, Boedeker EC, Harpaz N, Yuan J, et al. Permutation-based repeated measures ANCOVA results for each of the six phyla/subphyla bacterial categories (Clade). Plos One. DOI: 10.1371/Journal.Pone.0026284.T003 |
0.532 |
|
2011 |
Mourani PM, Harris JK, Sontag MK, Robertson CE, Abman SH. Molecular identification of bacteria in tracheal aspirate fluid from mechanically ventilated preterm infants. Plos One. 6: e25959. PMID 22016793 DOI: 10.1371/Journal.Pone.0025959 |
0.569 |
|
2011 |
Wagner BD, Robertson CE, Harris JK. Application of two-part statistics for comparison of sequence variant counts. Plos One. 6: e20296. PMID 21629788 DOI: 10.1371/Journal.Pone.0020296 |
0.572 |
|
2011 |
Frank DN, Robertson CE, Hamm CM, Kpadeh Z, Zhang T, Chen H, Zhu W, Sartor RB, Boedeker EC, Harpaz N, Pace NR, Li E. Disease phenotype and genotype are associated with shifts in intestinal-associated microbiota in inflammatory bowel diseases. Inflammatory Bowel Diseases. 17: 179-84. PMID 20839241 DOI: 10.1002/Ibd.21339 |
0.547 |
|
2011 |
Zhang T, DeSimone RA, Chen H, Hamm CM, Yuan J, Gong QQ, Hunt SR, Dassopoulos T, Newberry RD, Frank DN, Robertson CE, Pace NR, Sodergren E, Weinstock G, Jiao X, et al. Cluster analysis of genome-wide expression differences in disease-unaffected ileal mucosa in inflammatory bowel diseases 2011 Ieee 1st International Conference On Computational Advances in Bio and Medical Sciences, Iccabs 2011. 220-225. DOI: 10.1109/ICCABS.2011.5729884 |
0.433 |
|
2011 |
Li E, Hamm CM, Chen H, Wu X, Zhang T, Zhu W, Robertson CE, Pace NR, Sartor RB, Boedeker EC, Harpaz N, Yuan J, Sodergren E, Weinstock G, Frank D. NOD2 Genotype is Associated With Shifts in Human Ileal Mucosa-Associated Microbial Composition Gastroenterology. 140: S-27. DOI: 10.1016/S0016-5085(11)60105-4 |
0.522 |
|
2011 |
Pace NR, Baumgartner LK, Koll P, Ross K, Peterson K, Mihaylo S, Feazel L, Hernandez MT, Frank DN, Robertson CE. Ribosomal RNA surveys of human-occupied indoor environments 12th International Conference On Indoor Air Quality and Climate 2011. 4: 3302. |
0.577 |
|
2010 |
Li E, Sodergren E, Weinstock G, Stappenbeck T, Frank D, Robertson C, Pace N, Zhu W, Boedeker E, Sartor RB, Tarr P, Mayer L, Dietz D. Effect of Crohn’s Disease Risk Alleles on Enteric Microbiota Marker Paper Nature Precedings. DOI: 10.1038/Npre.2010.4975.1 |
0.485 |
|
2009 |
Robertson CE, Spear JR, Harris JK, Pace NR. Diversity and stratification of archaea in a hypersaline microbial mat. Applied and Environmental Microbiology. 75: 1801-10. PMID 19114531 DOI: 10.1128/Aem.01811-08 |
0.768 |
|
2007 |
Spear JR, Barton HA, Robertson CE, Francis CA, Pace NR. Microbial community biofabrics in a geothermal mine adit. Applied and Environmental Microbiology. 73: 6172-80. PMID 17693567 DOI: 10.1128/Aem.00393-07 |
0.704 |
|
2005 |
Robertson CE, Harris JK, Spear JR, Pace NR. Phylogenetic diversity and ecology of environmental Archaea. Current Opinion in Microbiology. 8: 638-42. PMID 16236543 DOI: 10.1016/J.Mib.2005.10.003 |
0.742 |
|
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