Yong Zhang - Publications

Affiliations: 
University of Chicago, Chicago, IL 
 2011-2014 Scripps & Calibr 
 2014- University of Southern California, Los Angeles, CA, United States 

194 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Zhao Y, Yin J, Zhang L, Zhang Y, Chen X. Drug-drug interaction prediction: databases, web servers and computational models. Briefings in Bioinformatics. 25. PMID 38113076 DOI: 10.1093/bib/bbad445  0.301
2023 Yu PW, Kao G, Dai Z, Nasertorabi F, Zhang Y. Rational design of humanized antibody inhibitors for cathepsin S. Archives of Biochemistry and Biophysics. 109849. PMID 38061628 DOI: 10.1016/j.abb.2023.109849  0.521
2023 Chen J, Landback P, Arsala D, Guzzetta A, Xia S, Atlas J, Dong C, Sosa D, Zhang YE, Cheng J, Shen B, Long M. Evolutionarily new genes in humans with disease phenotypes reveal functional enrichment patterns shaped by adaptive innovation and sexual selection. Biorxiv : the Preprint Server For Biology. PMID 38045239 DOI: 10.1101/2023.11.14.567139  0.786
2023 Stephens EN, Zhang XN, Lam AT, Li J, Pei H, Louie SG, Wang CCC, Zhang Y. A ribose-functionalized NAD with versatile activity for ADP-ribosylation. Chemical Communications (Cambridge, England). PMID 37921487 DOI: 10.1039/d3cc04343f  0.745
2023 Huang J, Wang R, Zhang Q, Wang C, Liang T, Hikichi Y, Ohnishi K, Jiang G, Guo T, Zhang Y. Positive regulation of the PhcB neighbouring regulator PrhX on expression of the type III secretion system and pathogenesis in Ralstonia solanacearum. Molecular Plant Pathology. PMID 37877898 DOI: 10.1111/mpp.13398  0.6
2023 Lei M, Zhu Z, Hu X, Wu D, Huang W, Zhang Y, Chen H. Postoperative Anti-Osteoporotic Therapy with Zoledronic Acid Improves Rotator Cuff Healing but Not Ameliorates Outcomes in Female Patients with Postmenopausal Osteoporosis: A Prospective, Single-Blinded Randomized Study. Arthroscopy : the Journal of Arthroscopic & Related Surgery : Official Publication of the Arthroscopy Association of North America and the International Arthroscopy Association. PMID 37832742 DOI: 10.1016/j.arthro.2023.09.033  0.626
2023 Liu Y, Zhang Y, Ding S, Sun R, Liu X, Su J, Sun B. [Changes and clinical significance of multiple cytokines in exhaled breath condensate in patients with severe inhalation injury]. Zhonghua Wei Zhong Bing Ji Jiu Yi Xue. 35: 818-822. PMID 37593859 DOI: 10.3760/cma.j.cn121430-20221219-01105  0.367
2023 Cheng Q, Zhang XN, Li J, Chen J, Wang Y, Zhang Y. Synthesis of Bispecific Antibody Conjugates Using Functionalized Poly-ADP-ribose Polymers. Biochemistry. PMID 36821831 DOI: 10.1021/acs.biochem.2c00718  0.733
2023 Zheng X, Zhang S, Liang Y, Zhang R, Liu L, Qin P, Zhang Z, Wang Y, Zhou J, Tang X, Zhang Y. Loss-function mutants of OsCKX gene family based on CRISPR-Cas systems revealed their diversified roles in rice. The Plant Genome. e20283. PMID 36660867 DOI: 10.1002/tpg2.20283  0.309
2022 Luo M, Su T, Wang S, Chen J, Lin T, Cheng Q, Chen Y, Gong M, Yang H, Li F, Zhang Y. Proteomic Landscape of Human Spermatozoa: Optimized Extraction Method and Application. Cells. 11. PMID 36552826 DOI: 10.3390/cells11244064  0.551
2022 Chen C, Yin Y, Li H, Zhou B, Zhou J, Zhou X, Li Z, Liu G, Pan X, Zhang R, Lin Z, Chen L, Qiu Q, Zhang YE, Wang W. Ruminant-specific genes identified using high-quality genome data and their roles in rumen evolution. Science Bulletin. 67: 825-835. PMID 36546235 DOI: 10.1016/j.scib.2022.01.023  0.414
2022 Cheng Q, Zhang XN, Zhang L, Chen J, Wang Y, Zhang Y. A Poly-ADP-Ribose Polymer-GCSF Conjugate. Biomacromolecules. PMID 36350184 DOI: 10.1021/acs.biomac.2c01090  0.713
2022 Li M, Li X, Zhou J, Sun Y, Du J, Wang Z, Luo Y, Zhang Y, Chen Q, Wang Y, Lin Y, Zhang Y, He W, Wang X, Tang H. Genome-wide identification and analysis of terpene synthase () genes in celery reveals their regulatory roles in terpenoid biosynthesis. Frontiers in Plant Science. 13: 1010780. PMID 36247575 DOI: 10.3389/fpls.2022.1010780  0.309
2022 Zhang Y, Guo C, Deng M, Li S, Chen Y, Gu X, Tang G, Lin Y, Wang Y, He W, Li M, Zhang Y, Luo Y, Wang X, Chen Q, et al. Genome-Wide Analysis of the ERF Family and Identification of Potential Genes Involved in Fruit Ripening in Octoploid Strawberry. International Journal of Molecular Sciences. 23. PMID 36142464 DOI: 10.3390/ijms231810550  0.316
2022 Guan Y, Wang R, Chen N, Zhu Y, Han L, Chen X, Li J, Zhang Y. Functional characterization of a gamma-glutamyl phosphate reductase ProA in proline biosynthesis and promoting expression of type three secretion system in . Frontiers in Microbiology. 13: 945831. PMID 36106083 DOI: 10.3389/fmicb.2022.945831  0.589
2022 Cheng Q, Dai Z, Smbatyan G, Epstein AL, Lenz HJ, Zhang Y. Eliciting Anti-Cancer Immunity by Genetically Engineered Multifunctional Exosomes. Molecular Therapy : the Journal of the American Society of Gene Therapy. PMID 35746867 DOI: 10.1016/j.ymthe.2022.06.013  0.676
2022 Li M, Li B, Yang M, Wang L, Hou G, Lin Y, Zhang Y, Zhang Y, Chen Q, Wang Y, He W, Wang X, Tang H, Yang G, Luo Y. Genome-Wide Identification and Expression of MAPK Gene Family in Cultivated Strawberry and Their Involvement in Fruit Developing and Ripening. International Journal of Molecular Sciences. 23. PMID 35563593 DOI: 10.3390/ijms23095201  0.309
2022 Lei D, Lin Y, Luo M, Zhao B, Tang H, Zhou X, Yao W, Zhang Y, Wang Y, Li M, Chen Q, Luo Y, Wang X, Tang H, Zhang Y. Genome-Wide Investigation of G6PDH Gene in Strawberry: Evolution and Expression Analysis during Development and Stress. International Journal of Molecular Sciences. 23. PMID 35563120 DOI: 10.3390/ijms23094728  0.309
2022 Zhang XN, Lam AT, Cheng Q, Courouble VV, Strutzenberg TS, Li J, Wang Y, Pei H, Stiles BL, Louie SG, Griffin PR, Zhang Y. Discovery of an NAD analogue with enhanced specificity for PARP1. Chemical Science. 13: 1982-1991. PMID 35308855 DOI: 10.1039/d1sc06256e  0.789
2022 Chen J, Zhang P, Chen H, Wang X, He X, Zhong J, Zheng H, Li X, Jakovlić I, Zhang Y, Chen Y, Shen B, Deng C, Wu Y. Whole-genome sequencing identifies rare missense variants of WNT16 and ERVW-1 causing the systemic lupus erythematosus. Genomics. 114: 110332. PMID 35283196 DOI: 10.1016/j.ygeno.2022.110332  0.549
2022 Zeng W, Zheng S, Su T, Cheng J, Mao Y, Zhong Y, Liu Y, Chen J, Zhao W, Lin T, Liu F, Li G, Yang H, Zhang Y. Comparative N-Glycoproteomics Analysis of Clinical Samples Via Different Mass Spectrometry Dissociation Methods. Frontiers in Chemistry. 10: 839470. PMID 35281567 DOI: 10.3389/fchem.2022.839470  0.52
2021 Zhang D, Leng L, Chen C, Huang J, Zhang Y, Yuan H, Ma C, Chen H, Zhang YE. Dosage sensitivity and exon shuffling shape the landscape of polymorphic duplicates in Drosophila and humans. Nature Ecology & Evolution. PMID 34969986 DOI: 10.1038/s41559-021-01614-w  0.309
2021 Wang X, Wang W, Wang Y, Chen J, Liu G, Zhang Y. Antibody-free profiling of transcription factor occupancy during early embryogenesis by FitCUT&RUN. Genome Research. PMID 34965941 DOI: 10.1101/gr.275837.121  0.342
2021 Zhang Q, Li W, Feng P, Liu Y, Meng P, Chu B, Zhao J, Li Y, Zhang Y, Liu J. Lnc5926 is essential for early embryonic development in goats through regulation of ZSCAN4 and EIF1AX. Theriogenology. 180: 87-93. PMID 34954662 DOI: 10.1016/j.theriogenology.2021.12.020  0.3
2021 Zhang J, Wang Y, Chen T, Chen Q, Wang L, Liu ZS, Wang H, Xie R, He W, Li M, Liu CL, Yang SF, Li MY, Lin YX, Zhang YT, ... Zhang Y, et al. Evolution of Rosaceae Plastomes Highlights Unique Diversification and Independent Origins of Fruiting Cherry. Frontiers in Plant Science. 12: 736053. PMID 34868119 DOI: 10.3389/fpls.2021.736053  0.341
2021 Zhang XN, Bai M, Ma KR, Zhang Y, Song CR, Zhang ZX, Cheng JL. The Value of Magnetic Resonance Imaging Histograms in the Preoperative Differential Diagnosis of Endometrial Stromal Sarcoma and Degenerative Hysteromyoma. Frontiers in Surgery. 8: 726067. PMID 34568419 DOI: 10.3389/fsurg.2021.726067  0.534
2021 Cheng Q, Dai Z, Shi X, Duan X, Wang Y, Hou T, Zhang Y. Expanding the toolbox of exosome-based modulators of cell functions. Biomaterials. 277: 121129. PMID 34534861 DOI: 10.1016/j.biomaterials.2021.121129  0.742
2021 Lambeth TR, Dai Z, Zhang Y, Julian RR. A two-trick pony: lysosomal protease cathepsin B possesses surprising ligase activity. Rsc Chemical Biology. 2: 606-611. PMID 34291207 DOI: 10.1039/d0cb00224k  0.459
2021 Zhang XN, Zhang Y, Wen BH, Cheng JL. The application of 3.0T conventional Magnetic Resonance Imaging and T mapping imaging in tiny stone foreign bodies in open ocular trauma. Asian Journal of Surgery. PMID 34284908 DOI: 10.1016/j.asjsur.2021.06.028  0.523
2021 Xia S, VanKuren NW, Chen C, Zhang L, Kemkemer C, Shao Y, Jia H, Lee U, Advani AS, Gschwend A, Vibranovski MD, Chen S, Zhang YE, Long M. Genomic analyses of new genes and their phenotypic effects reveal rapid evolution of essential functions in Drosophila development. Plos Genetics. 17: e1009654. PMID 34242211 DOI: 10.1371/journal.pgen.1009654  0.807
2021 Dai Z, Zhang XN, Cheng Q, Fei F, Hou T, Li J, Abdolvahabi A, Watanabe J, Pei H, Smbatyan G, Xie J, Lenz HJ, Louie SG, Zhang Y. Site-specific antibody-drug conjugates with variable drug-to-antibody-ratios for AML therapy. Journal of Controlled Release : Official Journal of the Controlled Release Society. PMID 34197861 DOI: 10.1016/j.jconrel.2021.06.041  0.789
2021 Li M, He Q, Huang Y, Luo Y, Zhang Y, Chen Q, Wang Y, Lin Y, Zhang Y, Liu Z, Wang XR, Tang H. Sucrose synthase gene family in : genomic organization, evolutionary comparisons, and expression regulation. Peerj. 9: e10878. PMID 33854830 DOI: 10.7717/peerj.10878  0.301
2021 Bi X, Wang K, Yang L, Pan H, Jiang H, Wei Q, Fang M, Yu H, Zhu C, Cai Y, He Y, Gan X, Zeng H, Yu D, Zhu Y, ... ... Zhang YE, et al. Tracing the genetic footprints of vertebrate landing in non-teleost ray-finned fishes. Cell. PMID 33545088 DOI: 10.1016/j.cell.2021.01.046  0.327
2021 Zhang W, Xie C, Ullrich K, Zhang YE, Tautz D. The mutational load in natural populations is significantly affected by high primary rates of retroposition. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33526666 DOI: 10.1073/pnas.2013043118  0.509
2021 Lam AT, Zhang XN, Courouble VV, Strutzenberg TS, Pei H, Stiles BL, Louie SG, Griffin PR, Zhang Y. A Bifunctional NAD for Profiling Poly-ADP-Ribosylation-Dependent Interacting Proteins. Acs Chemical Biology. PMID 33524253 DOI: 10.1021/acschembio.0c00937  0.746
2020 Shi X, Zhang XN, Chen J, Cheng Q, Pei H, Louie SG, Zhang Y. A poly-ADP-ribose polymer-based antibody-drug conjugate. Chemical Science. 11: 9303-9308. PMID 33623656 DOI: 10.1039/D0Sc01795G  0.78
2020 Lin Y, Zhang L, Zhang J, Zhang Y, Wang Y, Chen Q, Luo Y, Zhang Y, Li M, Wang X, Tang H. Identification of Anthocyanins-Related Glutathione S-Transferase (GST) Genes in the Genome of Cultivated Strawberry ( × ). International Journal of Molecular Sciences. 21. PMID 33218073 DOI: 10.3390/ijms21228708  0.321
2020 Li M, Xie F, Li Y, Gong L, Luo Y, Zhang Y, Chen Q, Wang Y, Lin Y, Zhang Y, Wang X, Tang H. Genome-Wide Analysis of the Heat Shock Transcription Factor Gene Family in : Structure, Evolution, and Expression Profiles. Dna and Cell Biology. PMID 32945687 DOI: 10.1089/dna.2020.5922  0.31
2020 Ding Y, Wang W, Ma D, Liang G, Kang Z, Xue Y, Zhang Y, Wang L, Heng J, Zhang Y, Liu F. Smarca5 mediated epigenetic programming facilitates fetal HSPC development in vertebrates. Blood. PMID 32756943 DOI: 10.1182/Blood.2020005219  0.313
2020 Ding Y, Wang W, Ma D, Liang G, Kang Z, Xue Y, Zhang Y, Wang L, Heng J, Zhang Y, Liu F. Smarca5 mediated epigenetic programming facilitates fetal HSPC development in vertebrates. Blood. PMID 32756943 DOI: 10.1182/Blood.2020005219  0.313
2020 Shi X, Zhang Y. A Humanized Antibody Inhibitor for Cathepsin L. Protein Science : a Publication of the Protein Society. PMID 32683733 DOI: 10.1002/pro.3913  0.545
2020 Dai Z, Zhang XN, Nasertorabi F, Cheng Q, Li J, Katz BB, Smbatyan G, Pei H, Louie SG, Lenz HJ, Stevens RC, Zhang Y. Synthesis of site-specific antibody-drug conjugates by ADP-ribosyl cyclases. Science Advances. 6: eaba6752. PMID 32537509 DOI: 10.1126/Sciadv.Aba6752  0.772
2020 Cheng WX, Huang H, Chen JH, Zhang TT, Zhu GY, Zheng ZT, Lin JT, Hu YP, Zhang Y, Bai XL, Wang Y, Xu ZW, Song B, Mao YY, Yang F, et al. Genistein inhibits angiogenesis developed during rheumatoid arthritis through the IL-6/JAK2/STAT3/VEGF signalling pathway. Journal of Orthopaedic Translation. 22: 92-100. PMID 32440504 DOI: 10.1016/j.jot.2019.07.007  0.527
2020 Park M, Vaikari VP, Lam AT, Zhang Y, MacKay JA, Alachkar H. Anti-FLT3 nanoparticles for acute myeloid leukemia: Preclinical pharmacology and pharmacokinetics. Journal of Controlled Release : Official Journal of the Controlled Release Society. PMID 32428520 DOI: 10.1016/J.Jconrel.2020.05.021  0.639
2020 Wang X, Han J, Huang D, Wang J, Xie Y, Liu Z, Li Y, Yang C, Zhang Y, He Z, Bao X, Yang R. Optimized Molecular Packing and Non-radiative Energy Loss Based on Terpolymer Methodology Combining Two Asymmetric Segments for High-Performance Polymer Solar Cells. Acs Applied Materials & Interfaces. PMID 32286056 DOI: 10.1021/acsami.0c01323  0.371
2020 Dai Z, Cheng Q, Zhang Y. Rational Design of a Humanized Antibody Inhibitor of Cathepsin B. Biochemistry. PMID 32212642 DOI: 10.1021/Acs.Biochem.0C00046  0.685
2020 Hu Y, Zhang T, Chen J, Cheng W, Chen J, Zheng Z, Lin J, Zhu G, Zhang Y, Bai X, Wang Y, Song B, Wang Q, Qin L, Zhang P. Downregulation of Hypoxia-Inducible Factor-1α by RNA Interference Alleviates the Development of Collagen-Induced Arthritis in Rats. Molecular Therapy. Nucleic Acids. 19: 1330-1342. PMID 32160704 DOI: 10.1016/j.omtn.2020.01.014  0.541
2020 Li M, Xie F, He Q, Li J, Liu J, Sun B, Luo Y, Zhang Y, Chen Q, Zhang F, Gong R, Wang Y, Wang X, Tang H. Expression Analysis of XTH in Stem Swelling of Stem Mustard and Selection of Reference Genes. Genes. 11. PMID 31968559 DOI: 10.3390/genes11010113  0.315
2020 Cheng Q, Shi X, Zhang Y. Reprogramming Exosomes for Immunotherapy. Methods in Molecular Biology (Clifton, N.J.). 2097: 197-209. PMID 31776927 DOI: 10.1007/978-1-0716-0203-4_12  0.681
2019 Zhu X, Wang K, Cao A, Zhang Y, Qiu J. Personality traits and negative affect mediate the relationship between cortical thickness of superior frontal cortex and aggressive behavior. Neuroscience Letters. 134728. PMID 31899310 DOI: 10.1016/J.Neulet.2019.134728  0.365
2019 Shi X, Cheng Q, Hou T, Han M, Smbatyan G, Lang JE, Epstein AL, Lenz HJ, Zhang Y. Genetically Engineered Cell-Derived Nanoparticles for Targeted Breast Cancer Immunotherapy. Molecular Therapy : the Journal of the American Society of Gene Therapy. PMID 31843452 DOI: 10.1016/J.Ymthe.2019.11.020  0.783
2019 Shi X, Cheng Q, Zhang Y. Reprogramming Extracellular Vesicles with Engineered Proteins. Methods (San Diego, Calif.). PMID 31568822 DOI: 10.1016/J.Ymeth.2019.09.017  0.654
2019 Zhang XN, Cheng Q, Chen J, Lam AT, Lu Y, Dai Z, Pei H, Evdokimov NM, Louie SG, Zhang Y. A ribose-functionalized NAD with unexpected high activity and selectivity for protein poly-ADP-ribosylation. Nature Communications. 10: 4196. PMID 31519936 DOI: 10.1038/S41467-019-12215-4  0.778
2019 Chen L, Qiu Q, Jiang Y, Wang K, Lin Z, Li Z, Bibi F, Yang Y, Wang J, Nie W, Su W, Liu G, Li Q, Fu W, Pan X, ... ... Zhang YE, et al. Large-scale ruminant genome sequencing provides insights into their evolution and distinct traits. Science (New York, N.Y.). 364. PMID 31221828 DOI: 10.1126/Science.Aav6202  0.386
2019 Zhang XN, Dai Z, Cheng Q, Zhang Y. Chemoenzymatic Preparation of 4'-Thioribose NAD. Current Protocols in Nucleic Acid Chemistry. e83. PMID 30951610 DOI: 10.1002/Cpnc.83  0.735
2019 Zu J, Gu Y, Li Y, Li C, Zhang W, Zhang YE, Lee U, Zhang L, Long M. Topological evolution of coexpression networks by new gene integration maintains the hierarchical and modular structures in human ancestors. Science China. Life Sciences. PMID 30919280 DOI: 10.1007/s11427-019-9483-6  0.636
2019 Shao Y, Chen C, Shen H, He BZ, Yu D, Jiang S, Zhao S, Gao Z, Zhu Z, Chen X, Fu Y, Chen H, Gao G, Long M, Zhang YE. GenTree, an integrated resource for analyzing the evolution and function of primate-specific coding genes. Genome Research. PMID 30862647 DOI: 10.1101/gr.238733.118  0.763
2019 Zhang L, Ren Y, Yang T, Li G, Chen J, Gschwend AR, Yu Y, Hou G, Zi J, Zhou R, Wen B, Zhang J, Chougule K, Wang M, Copetti D, ... ... Zhang Y, et al. Rapid evolution of protein diversity by de novo origination in Oryza. Nature Ecology & Evolution. PMID 30858588 DOI: 10.1038/S41559-019-0822-5  0.795
2019 Visger CJ, Wong GK, Zhang Y, Soltis PS, Soltis DE. Divergent gene expression levels between diploid and autotetraploid Tolmiea relative to the total transcriptome, the cell, and biomass. American Journal of Botany. PMID 30779448 DOI: 10.1002/Ajb2.1239  0.362
2018 Dai Z, Zhang XN, Nasertorabi F, Cheng Q, Pei H, Louie SG, Stevens RC, Zhang Y. Facile chemoenzymatic synthesis of a novel stable mimic of NAD. Chemical Science. 9: 8337-8342. PMID 30568770 DOI: 10.1039/c8sc03899f  0.75
2018 Cheng Q, Shi X, Han M, Smbatyan G, Lenz HJ, Zhang Y. Reprogramming Exosomes as Nanoscale Controllers of Cellular Immunity. Journal of the American Chemical Society. PMID 30452238 DOI: 10.1021/Jacs.8B10047  0.785
2018 Bai H, Guo X, Narisu N, Lan T, Wu Q, Xing Y, Zhang Y, Bond SR, Pei Z, Zhang Y, Zhang D, Jirimutu J, Zhang D, Yang X, Morigenbatu M, et al. Whole-genome sequencing of 175 Mongolians uncovers population-specific genetic architecture and gene flow throughout North and East Asia. Nature Genetics. PMID 30397334 DOI: 10.1038/S41588-018-0250-5  0.378
2018 Liu S, Huang S, Chen F, Zhao L, Yuan Y, Francis SS, Fang L, Li Z, Lin L, Liu R, Zhang Y, Xu H, Li S, Zhou Y, Davies RW, et al. Genomic Analyses from Non-invasive Prenatal Testing Reveal Genetic Associations, Patterns of Viral Infections, and Chinese Population History. Cell. 175: 347-359.e14. PMID 30290141 DOI: 10.1016/J.Cell.2018.08.016  0.321
2018 Dong J, Li F, Gao F, Wei J, Lin Y, Zhang Y, Lou J, Liu G, Dong Y, Liu L, Liu H, Wang J, Gong W. Structure of tRNA Modifying Enzyme TiaS and Motions of its Substrate Binding Zinc Ribbon. Journal of Molecular Biology. PMID 30121296 DOI: 10.1016/J.Jmb.2018.08.015  0.526
2018 Zhang Y, Xia Q, Lin J. Identification of the potential oncogenes in glioblastoma based on bioinformatic analysis and elucidation of the underlying mechanisms. Oncology Reports. PMID 29901201 DOI: 10.3892/or.2018.6483  0.301
2018 Xu X, Bi HL, Zhang ZJ, Yang Y, Li K, Huang YP, Zhang Y, He L. BmHpo mutation induces smaller body size and late stage larval lethality in the silkworm, Bombyx mori. Insect Science. PMID 29808962 DOI: 10.1111/1744-7917.12607  0.323
2018 Ye J, Zhang Y, Cui H, Liu J, Wu Y, Cheng Y, Xu H, Huang X, Li S, Zhou A, Zhang X, Bolund L, Chen Q, Wang J, Yang H, et al. WEGO 2.0: a web tool for analyzing and plotting GO annotations, 2018 update. Nucleic Acids Research. PMID 29788377 DOI: 10.1093/Nar/Gky400  0.333
2017 Chen J, Lam AT, Zhang Y. A macrodomain-linked immunosorbent assay (MLISA) for mono-ADP-ribosyltransferases. Analytical Biochemistry. 543: 132-139. PMID 29247608 DOI: 10.1016/J.Ab.2017.12.019  0.69
2017 Lang D, Ullrich KK, Murat F, Fuchs J, Jenkins J, Haas FB, Piednoel M, Gundlach H, Van Bel M, Meyberg R, Vives C, Morata J, Symeonidi A, Hiss M, Muchero W, ... ... Zhang Y, et al. The P. patens chromosome-scale assembly reveals moss genome structure and evolution. The Plant Journal : For Cell and Molecular Biology. PMID 29237241 DOI: 10.1111/Tpj.13801  0.341
2017 Du J, Cao Y, Liu Y, Wang Y, Zhang Y, Fu G, Zhang Y, Lu L, Luo X, Kim CH, Schultz PG, Wang F. Engineering Bifunctional Antibodies with Constant Region Fusion Architectures. Journal of the American Chemical Society. PMID 29186655 DOI: 10.1021/Jacs.7B09641  0.772
2017 Zhang Y, Li J, Zhang W, Wang R, Qiu Q, Luo F, Hikichi Y, Ohnishi K, Ding W. Ferulic Acid, But Not All Hydroxycinnamic Acids, Is a Novel T3SS Inducer of Ralstonia solanacearum and Promotes Its Infection Process in Host Plants under Hydroponic Condition. Frontiers in Plant Science. 8: 1595. PMID 28955375 DOI: 10.3389/fpls.2017.01595  0.561
2017 Chen ZX, Oliver B, Zhang YE, Gao G, Long M. Expressed Structurally-stable Inverted Duplicates in Mammalian Genomes as Functional Noncoding Elements. Genome Biology and Evolution. PMID 28338961 DOI: 10.1093/gbe/evx054  0.668
2016 Tan S, Cardoso-Moreira M, Shi W, Zhang D, Huang J, Mao Y, Jia H, Zhang Y, Chen C, Shao Y, Leng L, Liu Z, Huang X, Long M, Zhang YE. LTR-mediated retroposition as a mechanism of RNA-based duplication in metazoans. Genome Research. 26: 1663-1675. PMID 27934698 DOI: 10.1101/Gr.204925.116  0.557
2016 Jia Q, Li G, Köllner TG, Fu J, Chen X, Xiong W, Crandall-Stotler BJ, Bowman JL, Weston DJ, Zhang Y, Chen L, Xie Y, Li FW, Rothfels CJ, Larsson A, et al. Microbial-type terpene synthase genes occur widely in nonseed land plants, but not in seed plants. Proceedings of the National Academy of Sciences of the United States of America. 113: 12328-12333. PMID 27791023 DOI: 10.1073/Pnas.1607973113  0.302
2016 Liu Y, Wang Y, Zhang Y, Liu T, Jia H, Zou H, Fu Q, Zhang Y, Lu L, Chao E, Parker H, Nguyen-Tran V, Shen W, Wang D, Schultz PG, et al. Rational Design of Dual Agonist-Antibody Fusions as Long-acting Therapeutic Hormones. Acs Chemical Biology. PMID 27704775 DOI: 10.1021/Acschembio.6B00630  0.606
2016 Wang RE, Wang Y, Zhang Y, Gabrelow C, Zhang Y, Chi V, Fu Q, Luo X, Wang D, Joseph S, Johnson K, Chatterjee AK, Wright TM, Nguyen-Tran VT, Teijaro J, et al. Rational design of a Kv1.3 channel-blocking antibody as a selective immunosuppressant. Proceedings of the National Academy of Sciences of the United States of America. 113: 11501-11506. PMID 27663736 DOI: 10.1073/Pnas.1612803113  0.789
2016 Luo X, Wang TA, Zhang Y, Wang F, Schultz PG. Stabilizing Protein Motifs with a Genetically Encoded Metal-Ion Chelator. Cell Chemical Biology. 23: 1098-1102. PMID 27662253 DOI: 10.1016/J.Chembiol.2016.08.007  0.676
2016 Wang D, Xu Y, Zhang Y, Zhu S, Si Y, Yan D, Zhu H, Yang Q, Ji T, Xu W. [Genetic Characteristics of Coxsackievirus Group A Type 4 Isolated from Patients with Acute Flaccid Paralysis in Shaanxi, China]. Bing Du Xue Bao = Chinese Journal of Virology / [Bian Ji, Bing Du Xue Bao Bian Ji Wei Yuan Hui]. 32: 145-9. PMID 27396156  0.374
2016 Yang Q, Zhang Y, Yan D, Zhu S, Wang D, Ji T, Huang W, An H, Xu W. Isolation of an imported subgenotype B5 strain of human enterovirus A71 in Chongqing City, China, 2014. Virology Journal. 13: 115. PMID 27357279 DOI: 10.1186/s12985-016-0571-x  0.359
2016 Zhu Z, Tan S, Zhang Y, Zhang YE. LINE-1-like retrotransposons contribute to RNA-based gene duplication in dicots. Scientific Reports. 6: 24755. PMID 27098918 DOI: 10.1038/Srep24755  0.698
2016 Luo S, Lu JY, Liu L, Yin Y, Chen C, Han X, Wu B, Xu R, Liu W, Yan P, Shao W, Lu Z, Li H, Na J, Tang F, ... ... Zhang YE, et al. Divergent lncRNAs Regulate Gene Expression and Lineage Differentiation in Pluripotent Cells. Cell Stem Cell. PMID 26996597 DOI: 10.1016/J.Stem.2016.01.024  0.477
2016 Zhang Y, Li J, Wang Z, Ma H, Wu D, Cheng Q, Wei Q. Label-free electrochemical immunosensor based on enhanced signal amplification between Au@Pd and CoFe2O4/graphene nanohybrid. Scientific Reports. 6: 23391. PMID 26987503 DOI: 10.1038/srep23391  0.502
2016 Ai Z, Shao J, Wu Y, Yu M, Du J, Shi X, Shi X, Zhang Y, Guo Z. CHIR99021 enhances Klf4 Expression through β-Catenin Signaling and miR-7a Regulation in J1 Mouse Embryonic Stem Cells. Plos One. 11: e0150936. PMID 26938105 DOI: 10.1371/journal.pone.0150936  0.504
2016 Luo Y, Wang Y, Liu J, Cui C, Wu Y, Lan H, Chen Q, Liu X, Quan F, Guo Z, Zhang Y. Generation of TALE nickase-mediated gene-targeted cows expressing human serum albumin in mammary glands. Scientific Reports. 6: 20657. PMID 26853907 DOI: 10.1038/srep20657  0.324
2016 Li S, Xie Z, Chen P, Tang J, Tang L, Chen H, Wang D, Zhang Y, Lin H. The complete mitochondrial genome of the Platax teira (Osteichthyes: Ephippidae). Mitochondrial Dna. 27: 796-7. PMID 24845448 DOI: 10.3109/19401736.2014.915542  0.319
2015 Ji J, Wang Q, Zhang Y, Wang Z, Shi X, Guan W, Wu K, Xu L, Chen W, Xue F, Jiang M, Cheng Y, Wang T, Zhong N. [Changes in small airway function in rhinitis without asthma]. Lin Chuang Er Bi Yan Hou Tou Jing Wai Ke Za Zhi = Journal of Clinical Otorhinolaryngology, Head, and Neck Surgery. 29: 1864-7. PMID 26930907  0.435
2015 Han Y, Zhang K, Yang J, Zhang N, Fang A, Zhang Y, Liu Y, Chen Z, Hsiang T, Sun W. Differential expression profiling of the early response to Ustilaginoidea virens between false smut resistant and susceptible rice varieties. Bmc Genomics. 16: 955. PMID 26573512 DOI: 10.1186/s12864-015-2193-x  0.343
2015 Zhang Y, Zheng L, Liu Y, Pang X, Wang X, Zhang L. Acute myocardial infarction in a 39-year-old lactating woman. International Journal of Cardiology. 203: 489-490. PMID 26547744 DOI: 10.1016/j.ijcard.2015.10.195  0.328
2015 Gao G, Li D, Zhang Y, Yuan S, Armghan A, Huang Q, Wang Y, Yu J, Xia J. Tuning of resonance spacing over whole free spectral range based on Autler-Townes splitting in a single microring resonator. Optics Express. 23: 26895-26904. PMID 26480351 DOI: 10.1364/OE.23.026895  0.314
2015 Wu DD, Ye LQ, Li Y, Sun YB, Shao Y, Chen C, Zhu Z, Zhong L, Wang L, Irwin DM, Zhang YE, Zhang YP. Integrative analyses of RNA-editing, alternative splicing, and expression of young genes in human brain transcriptome by deep RNA-sequencing. Journal of Molecular Cell Biology. PMID 26186942 DOI: 10.1093/Jmcb/Mjv043  0.327
2015 Wang Y, Xie J, Li Y, Dong S, Liu H, Chen J, Wang Y, Zhao S, Zhang Y, Zhang H. Probiotic Lactobacillus casei Zhang reduces pro-inflammatory cytokine production and hepatic inflammation in a rat model of acute liver failure. European Journal of Nutrition. PMID 25893720 DOI: 10.1007/s00394-015-0904-3  0.356
2015 Yang Y, Moore MJ, Brockington SF, Soltis DE, Wong GK, Carpenter EJ, Zhang Y, Chen L, Yan Z, Xie Y, Sage RF, Covshoff S, Hibberd JM, Nelson MN, Smith SA. Dissecting Molecular Evolution in the Highly Diverse Plant Clade Caryophyllales Using Transcriptome Sequencing. Molecular Biology and Evolution. 32: 2001-14. PMID 25837578 DOI: 10.1093/Molbev/Msv081  0.373
2015 Liu T, Zhang Y, Liu Y, Wang Y, Jia H, Kang M, Luo X, Caballero D, Gonzalez J, Sherwood L, Nunez V, Wang D, Woods A, Schultz PG, Wang F. Functional human antibody CDR fusions as long-acting therapeutic endocrine agonists. Proceedings of the National Academy of Sciences of the United States of America. 112: 1356-61. PMID 25605877 DOI: 10.1073/Pnas.1423668112  0.789
2015 Zhang Y, Zou H, Wang Y, Caballero D, Gonzalez J, Chao E, Welzel G, Shen W, Wang D, Schultz PG, Wang F. Rational design of a humanized glucagon-like peptide-1 receptor agonist antibody. Angewandte Chemie (International Ed. in English). 54: 2126-30. PMID 25556336 DOI: 10.1002/Anie.201410049  0.598
2015 Hollister JD, Greiner S, Wang W, Wang J, Zhang Y, Wong GK, Wright SI, Johnson MT. Recurrent loss of sex is associated with accumulation of deleterious mutations in Oenothera. Molecular Biology and Evolution. 32: 896-905. PMID 25534028 DOI: 10.1093/Molbev/Msu345  0.305
2015 Zhang Y, Liu Y, Wang Y, Schultz PG, Wang F. Rational design of humanized dual-agonist antibodies. Journal of the American Chemical Society. 137: 38-41. PMID 25494484 DOI: 10.1021/Ja510519U  0.479
2015 Zhao Z, Xu J, Chen J, Kim S, Reimers M, Bacanu SA, Yu H, Liu C, Sun J, Wang Q, Jia P, Xu F, Zhang Y, Kendler KS, Peng Z, et al. Transcriptome sequencing and genome-wide association analyses reveal lysosomal function and actin cytoskeleton remodeling in schizophrenia and bipolar disorder. Molecular Psychiatry. 20: 563-72. PMID 25113377 DOI: 10.1038/Mp.2014.82  0.36
2014 Li C, Zhang Y, Li J, Kong L, Hu H, Pan H, Xu L, Deng Y, Li Q, Jin L, Yu H, Chen Y, Liu B, Yang L, Liu S, ... Zhang Y, et al. Two Antarctic penguin genomes reveal insights into their evolutionary history and molecular changes related to the Antarctic environment. Gigascience. 3: 27. PMID 25671092 DOI: 10.1186/2047-217X-3-27  0.322
2014 Matasci N, Hung LH, Yan Z, Carpenter EJ, Wickett NJ, Mirarab S, Nguyen N, Warnow T, Ayyampalayam S, Barker M, Burleigh JG, Gitzendanner MA, Wafula E, Der JP, dePamphilis CW, ... ... Zhang Y, et al. Data access for the 1,000 Plants (1KP) project. Gigascience. 3: 17. PMID 25625010 DOI: 10.1186/2047-217X-3-17  0.443
2014 Zhang G, Li C, Li Q, Li B, Larkin DM, Lee C, Storz JF, Antunes A, Greenwold MJ, Meredith RW, Ödeen A, Cui J, Zhou Q, Xu L, Pan H, ... ... Zhang Y, et al. Comparative genomics reveals insights into avian genome evolution and adaptation. Science (New York, N.Y.). 346: 1311-20. PMID 25504712 DOI: 10.1126/Science.1251385  0.395
2014 You X, Bian C, Zan Q, Xu X, Liu X, Chen J, Wang J, Qiu Y, Li W, Zhang X, Sun Y, Chen S, Hong W, Li Y, Cheng S, ... ... Zhang Y, et al. Mudskipper genomes provide insights into the terrestrial adaptation of amphibious fishes. Nature Communications. 5: 5594. PMID 25463417 DOI: 10.1038/Ncomms6594  0.395
2014 Misof B, Liu S, Meusemann K, Peters RS, Donath A, Mayer C, Frandsen PB, Ware J, Flouri T, Beutel RG, Niehuis O, Petersen M, Izquierdo-Carrasco F, Wappler T, Rust J, ... ... Zhang Y, ... ... Zhang Y, et al. Phylogenomics resolves the timing and pattern of insect evolution. Science (New York, N.Y.). 346: 763-7. PMID 25378627 DOI: 10.1126/Science.1257570  0.362
2014 Wickett NJ, Mirarab S, Nguyen N, Warnow T, Carpenter E, Matasci N, Ayyampalayam S, Barker MS, Burleigh JG, Gitzendanner MA, Ruhfel BR, Wafula E, Der JP, Graham SW, Mathews S, ... ... Zhang Y, et al. Phylotranscriptomic analysis of the origin and early diversification of land plants. Proceedings of the National Academy of Sciences of the United States of America. 111: E4859-68. PMID 25355905 DOI: 10.1073/Pnas.1323926111  0.39
2014 Poulsen M, Hu H, Li C, Chen Z, Xu L, Otani S, Nygaard S, Nobre T, Klaubauf S, Schindler PM, Hauser F, Pan H, Yang Z, Sonnenberg AS, de Beer ZW, ... Zhang Y, et al. Complementary symbiont contributions to plant decomposition in a fungus-farming termite. Proceedings of the National Academy of Sciences of the United States of America. 111: 14500-5. PMID 25246537 DOI: 10.1073/Pnas.1319718111  0.307
2014 Zhang YE, Long M. New genes contribute to genetic and phenotypic novelties in human evolution. Current Opinion in Genetics & Development. 29: 90-6. PMID 25218862 DOI: 10.1016/j.gde.2014.08.013  0.535
2014 Liu H, Yang H, Zhu D, Sui X, Li J, Liang Z, Xu L, Chen Z, Yao A, Zhang L, Zhang X, Yi X, Liu M, Xu S, Zhang W, ... ... Zhang Y, et al. Systematically labeling developmental stage-specific genes for the study of pancreatic β-cell differentiation from human embryonic stem cells. Cell Research. 24: 1181-200. PMID 25190258 DOI: 10.1038/Cr.2014.118  0.787
2014 Lu H, Zhou Q, Deshmukh V, Phull H, Ma J, Tardif V, Naik RR, Bouvard C, Zhang Y, Choi S, Lawson BR, Zhu S, Kim CH, Schultz PG. Targeting human C-type lectin-like molecule-1 (CLL1) with a bispecific antibody for immunotherapy of acute myeloid leukemia. Angewandte Chemie (International Ed. in English). 53: 9841-5. PMID 25056598 DOI: 10.1002/Anie.201405353  0.779
2014 Wang X, Xia M, Lai Y, Dai Z, Cao Q, Cheng Z, Han X, Yang L, Yuan Y, Zhang Y, Li K, Ma H, Shi C, Hong N, Szeszko P, et al. Disrupted resting-state functional connectivity in minimally treated chronic schizophrenia. Schizophrenia Research. 156: 150-6. PMID 24794395 DOI: 10.1016/j.schres.2014.03.033  0.414
2014 Li FW, Villarreal JC, Kelly S, Rothfels CJ, Melkonian M, Frangedakis E, Ruhsam M, Sigel EM, Der JP, Pittermann J, Burge DO, Pokorny L, Larsson A, Chen T, Weststrand S, ... ... Zhang Y, et al. Horizontal transfer of an adaptive chimeric photoreceptor from bryophytes to ferns. Proceedings of the National Academy of Sciences of the United States of America. 111: 6672-7. PMID 24733898 DOI: 10.1073/Pnas.1319929111  0.526
2014 He B, Zhang Y, Xu L, Yang W, Yang F, Feng Y, Xia L, Zhou J, Zhen W, Feng Y, Guo H, Zhang H, Tu C. Identification of diverse alphacoronaviruses and genomic characterization of a novel severe acute respiratory syndrome-like coronavirus from bats in China. Journal of Virology. 88: 7070-82. PMID 24719429 DOI: 10.1128/Jvi.00631-14  0.337
2014 Klapoetke NC, Murata Y, Kim SS, Pulver SR, Birdsey-Benson A, Cho YK, Morimoto TK, Chuong AS, Carpenter EJ, Tian Z, Wang J, Xie Y, Yan Z, Zhang Y, Chow BY, et al. Independent optical excitation of distinct neural populations. Nature Methods. 11: 338-46. PMID 24509633 DOI: 10.1038/Nmeth.2836  0.309
2014 Shao C, Li Q, Chen S, Zhang P, Lian J, Hu Q, Sun B, Jin L, Liu S, Wang Z, Zhao H, Jin Z, Liang Z, Li Y, Zheng Q, ... Zhang Y, et al. Epigenetic modification and inheritance in sexual reversal of fish. Genome Research. 24: 604-15. PMID 24487721 DOI: 10.1101/Gr.162172.113  0.355
2014 Sayou C, Monniaux M, Nanao MH, Moyroud E, Brockington SF, Thévenon E, Chahtane H, Warthmann N, Melkonian M, Zhang Y, Wong GK, Weigel D, Parcy F, Dumas R. A promiscuous intermediate underlies the evolution of LEAFY DNA binding specificity. Science (New York, N.Y.). 343: 645-8. PMID 24436181 DOI: 10.1126/Science.1248229  0.374
2014 Gao G, Vibranovski MD, Zhang L, Li Z, Liu M, Zhang YE, Li X, Zhang W, Fan Q, VanKuren NW, Long M, Wei L. A long-term demasculinization of X-linked intergenic noncoding RNAs in Drosophila melanogaster. Genome Research. 24: 629-38. PMID 24407956 DOI: 10.1101/Gr.165837.113  0.782
2014 Zhang Y, Goswami D, Wang D, Wang TS, Sen S, Magliery TJ, Griffin PR, Wang F, Schultz PG. An antibody with a variable-region coiled-coil "knob" domain. Angewandte Chemie (International Ed. in English). 53: 132-5. PMID 24254636 DOI: 10.1002/Anie.201307939  0.784
2014 Tang H, Jin X, Li Y, Jiang H, Tang X, Yang X, Cheng H, Qiu Y, Chen G, Mei J, Zhou F, Wu R, Zuo X, Zhang Y, Zheng X, et al. A large-scale screen for coding variants predisposing to psoriasis. Nature Genetics. 46: 45-50. PMID 24212883 DOI: 10.1038/Ng.2827  0.383
2013 Luo Y, Liu J, Wang Y, Su J, Wu Y, Hu G, Gao M, Quan F, Zhang Y. PhiC31 integrase-mediated genomic integration and stable gene expression in the mouse mammary gland after gene electrotransfer. The Journal of Gene Medicine. 15: 356-65. PMID 24288809  0.301
2013 Zhang Y, Evans GB, Clinch K, Crump DR, Harris LD, Fröhlich RF, Tyler PC, Hazleton KZ, Cassera MB, Schramm VL. Transition state analogues of Plasmodium falciparum and human orotate phosphoribosyltransferases. The Journal of Biological Chemistry. 288: 34746-54. PMID 24158442 DOI: 10.1074/Jbc.M113.521955  0.424
2013 Liu X, Wang Y, Guo W, Chang B, Liu J, Guo Z, Quan F, Zhang Y. Zinc-finger nickase-mediated insertion of the lysostaphin gene into the beta-casein locus in cloned cows. Nature Communications. 4: 2565. PMID 24121612 DOI: 10.1038/ncomms3565  0.323
2013 Zhang Y, Wang D, Welzel G, Wang Y, Schultz PG, Wang F. An antibody CDR3-erythropoietin fusion protein. Acs Chemical Biology. 8: 2117-21. PMID 23941200 DOI: 10.1021/Cb4004749  0.468
2013 Azim MK, Yang C, Yan Z, Choudhary MI, Khan A, Sun X, Li R, Asif H, Sharif S, Zhang Y. Complete genome sequencing and variant analysis of a Pakistani individual. Journal of Human Genetics. 58: 622-6. PMID 23842039 DOI: 10.1038/jhg.2013.72  0.396
2013 Qu Y, Zhao H, Han N, Zhou G, Song G, Gao B, Tian S, Zhang J, Zhang R, Meng X, Zhang Y, Zhang Y, Zhu X, Wang W, Lambert D, et al. Ground tit genome reveals avian adaptation to living at high altitudes in the Tibetan plateau. Nature Communications. 4: 2071. PMID 23817352 DOI: 10.1038/Ncomms3071  0.338
2013 Zhang Y, Wang D, de Lichtervelde L, Sun SB, Smider VV, Schultz PG, Wang F. Functional antibody CDR3 fusion proteins with enhanced pharmacological properties. Angewandte Chemie (International Ed. in English). 52: 8295-8. PMID 23794517 DOI: 10.1002/Anie.201303656  0.78
2013 Wang F, Sambandan D, Halder R, Wang J, Batt SM, Weinrick B, Ahmad I, Yang P, Zhang Y, Kim J, Hassani M, Huszar S, Trefzer C, Ma Z, Kaneko T, et al. Identification of a small molecule with activity against drug-resistant and persistent tuberculosis. Proceedings of the National Academy of Sciences of the United States of America. 110: E2510-7. PMID 23776209 DOI: 10.1073/Pnas.1309171110  0.752
2013 Huang Y, Li Y, Burt DW, Chen H, Zhang Y, Qian W, Kim H, Gan S, Zhao Y, Li J, Yi K, Feng H, Zhu P, Li B, Liu Q, et al. The duck genome and transcriptome provide insight into an avian influenza virus reservoir species. Nature Genetics. 45: 776-83. PMID 23749191 DOI: 10.1038/Ng.2657  0.337
2013 Wang F, Ekiert DC, Ahmad I, Yu W, Zhang Y, Bazirgan O, Torkamani A, Raudsepp T, Mwangi W, Criscitiello MF, Wilson IA, Schultz PG, Smider VV. Reshaping antibody diversity. Cell. 153: 1379-93. PMID 23746848 DOI: 10.1016/J.Cell.2013.04.049  0.634
2013 Liu Y, Marks K, Cowley GS, Carretero J, Liu Q, Nieland TJ, Xu C, Cohoon TJ, Gao P, Zhang Y, Chen Z, Altabef AB, Tchaicha JH, Wang X, Choe S, et al. Metabolic and functional genomic studies identify deoxythymidylate kinase as a target in LKB1-mutant lung cancer. Cancer Discovery. 3: 870-9. PMID 23715154 DOI: 10.1158/2159-8290.Cd-13-0015  0.728
2013 Ge RL, Cai Q, Shen YY, San A, Ma L, Zhang Y, Yi X, Chen Y, Yang L, Huang Y, He R, Hui Y, Hao M, Li Y, Wang B, ... ... Zhang Y, ... ... Zhang YP, et al. Draft genome sequence of the Tibetan antelope. Nature Communications. 4: 1858. PMID 23673643 DOI: 10.1038/Ncomms2860  0.393
2013 Karpowicz P, Zhang Y, Hogenesch JB, Emery P, Perrimon N. The circadian clock gates the intestinal stem cell regenerative state. Cell Reports. 3: 996-1004. PMID 23583176 DOI: 10.1016/J.Celrep.2013.03.016  0.473
2013 Chen J, Huang Q, Gao D, Wang J, Lang Y, Liu T, Li B, Bai Z, Luis Goicoechea J, Liang C, Chen C, Zhang W, Sun S, Liao Y, Zhang X, ... ... Zhang Y, et al. Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying Oryza genome evolution. Nature Communications. 4: 1595. PMID 23481403 DOI: 10.1038/Ncomms2596  0.386
2013 Wang F, Sen S, Zhang Y, Ahmad I, Zhu X, Wilson IA, Smider VV, Magliery TJ, Schultz PG. Somatic hypermutation maintains antibody thermodynamic stability during affinity maturation. Proceedings of the National Academy of Sciences of the United States of America. 110: 4261-6. PMID 23440204 DOI: 10.1073/Pnas.1301810110  0.778
2013 Zhang G, Cowled C, Shi Z, Huang Z, Bishop-Lilly KA, Fang X, Wynne JW, Xiong Z, Baker ML, Zhao W, Tachedjian M, Zhu Y, Zhou P, Jiang X, Ng J, ... ... Zhang Y, et al. Comparative analysis of bat genomes provides insight into the evolution of flight and immunity. Science (New York, N.Y.). 339: 456-60. PMID 23258410 DOI: 10.1126/Science.1230835  0.388
2012 Ni X, Zhang YE, Nègre N, Chen S, Long M, White KP. Adaptive evolution and the birth of CTCF binding sites in the Drosophila genome. Plos Biology. 10: e1001420. PMID 23139640 DOI: 10.1371/Journal.Pbio.1001420  0.677
2012 Zhang YE, Landback P, Vibranovski M, Long M. New genes expressed in human brains: implications for annotating evolving genomes. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 34: 982-91. PMID 23001763 DOI: 10.1002/Bies.201200008  0.802
2012 Zhang G, Fang X, Guo X, Li L, Luo R, Xu F, Yang P, Zhang L, Wang X, Qi H, Xiong Z, Que H, Xie Y, Holland PW, Paps J, ... ... Zhang Y, et al. The oyster genome reveals stress adaptation and complexity of shell formation. Nature. 490: 49-54. PMID 22992520 DOI: 10.1038/Nature11413  0.412
2012 Vibranovski MD, Zhang YE, Kemkemer C, VanKuren NW, Lopes HF, Karr TL, Long M. Segmental dataset and whole body expression data do not support the hypothesis that non-random movement is an intrinsic property of Drosophila retrogenes. Bmc Evolutionary Biology. 12: 169. PMID 22950647 DOI: 10.1186/1471-2148-12-169  0.797
2012 Tuszynski JA, Craddock TJ, Mane JY, Barakat K, Tseng CY, Gajewski M, Winter P, Alisaraie L, Patterson J, Carpenter E, Wang W, Deyholos MK, Li L, Sun X, Zhang Y, et al. Modeling the yew tree tubulin and a comparison of its interaction with paclitaxel to human tubulin. Pharmaceutical Research. 29: 3007-21. PMID 22833053 DOI: 10.1007/S11095-012-0829-Y  0.412
2012 Vibranovski MD, Zhang YE, Kemkemer C, Lopes HF, Karr TL, Long M. Re-analysis of the larval testis data on meiotic sex chromosome inactivation revealed evidence for tissue-specific gene expression related to the drosophila X chromosome. Bmc Biology. 10: 49; author reply 50. PMID 22691264 DOI: 10.1186/1741-7007-10-49  0.761
2012 Nelson MR, Wegmann D, Ehm MG, Kessner D, St Jean P, Verzilli C, Shen J, Tang Z, Bacanu SA, Fraser D, Warren L, Aponte J, Zawistowski M, Liu X, Zhang H, ... Zhang Y, et al. An abundance of rare functional variants in 202 drug target genes sequenced in 14,002 people. Science (New York, N.Y.). 337: 100-4. PMID 22604722 DOI: 10.1126/Science.1217876  0.364
2012 Chen S, Ni X, Krinsky BH, Zhang YE, Vibranovski MD, White KP, Long M. Reshaping of global gene expression networks and sex-biased gene expression by integration of a young gene. The Embo Journal. 31: 2798-809. PMID 22543869 DOI: 10.1038/Emboj.2012.108  0.797
2012 Kim Guisbert KS, Zhang Y, Flatow J, Hurtado S, Staley JP, Lin S, Sontheimer EJ. Meiosis-induced alterations in transcript architecture and noncoding RNA expression in S. cerevisiae. Rna (New York, N.Y.). 18: 1142-53. PMID 22539527 DOI: 10.1261/Rna.030510.111  0.31
2011 Zhang YE, Landback P, Vibranovski MD, Long M. Accelerated recruitment of new brain development genes into the human genome. Plos Biology. 9: e1001179. PMID 22028629 DOI: 10.1371/Journal.Pbio.1001179  0.791
2011 Yan G, Zhang G, Fang X, Zhang Y, Li C, Ling F, Cooper DN, Li Q, Li Y, van Gool AJ, Du H, Chen J, Chen R, Zhang P, Huang Z, ... ... Zhang Y, et al. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Nature Biotechnology. 29: 1019-23. PMID 22002653 DOI: 10.1038/Nbt.1992  0.476
2011 Shi Y, Li Y, Zhang D, Zhang H, Li Y, Lu F, Liu X, He F, Gong B, Cai L, Li R, Liao S, Ma S, Lin H, Cheng J, ... ... Zhang Y, et al. Exome sequencing identifies ZNF644 mutations in high myopia. Plos Genetics. 7: e1002084. PMID 21695231 DOI: 10.1371/Journal.Pgen.1002084  0.388
2011 Cassera MB, Zhang Y, Hazleton KZ, Schramm VL. Purine and pyrimidine pathways as targets in Plasmodium falciparum. Current Topics in Medicinal Chemistry. 11: 2103-15. PMID 21619511 DOI: 10.2174/156802611796575948  0.435
2011 Zhang YE, Vibranovski MD, Krinsky BH, Long M. A cautionary note for retrocopy identification: DNA-based duplication of intron-containing genes significantly contributes to the origination of single exon genes. Bioinformatics (Oxford, England). 27: 1749-53. PMID 21551137 DOI: 10.1093/bioinformatics/btr280  0.799
2011 Chen ZX, Zhang YE, Vibranovski M, Luo J, Gao G, Long M. Deficiency of X-linked inverted duplicates with male-biased expression and the underlying evolutionary mechanisms in the Drosophila genome. Molecular Biology and Evolution. 28: 2823-32. PMID 21546357 DOI: 10.1093/Molbev/Msr101  0.795
2011 Zhang Y, Schramm VL. Ground-state destabilization in orotate phosphoribosyltransferases by binding isotope effects. Biochemistry. 50: 4813-8. PMID 21526795 DOI: 10.1021/Bi200638X  0.384
2010 Wang J, Zhang J, Li R, Zheng H, Li J, Zhang Y, Li H, Ni P, Li S, Li S, Wang J, Liu D, McDermott J, Samudrala R, Liu S, et al. Evolutionary transients in the rice transcriptome. Genomics, Proteomics & Bioinformatics. 8: 211-28. PMID 21382590 DOI: 10.1016/S1672-0229(10)60023-X  0.423
2010 Chen S, Zhang YE, Long M. New genes in Drosophila quickly become essential. Science (New York, N.Y.). 330: 1682-5. PMID 21164016 DOI: 10.1126/Science.1196380  0.711
2010 Zhang Y, Deng H, Schramm VL. Leaving group activation and pyrophosphate ionic state at the catalytic site of Plasmodium falciparum orotate phosphoribosyltransferase. Journal of the American Chemical Society. 132: 17023-31. PMID 21067187 DOI: 10.1021/Ja107806J  0.386
2010 Zhang YE, Vibranovski MD, Landback P, Marais GA, Long M. Chromosomal redistribution of male-biased genes in mammalian evolution with two bursts of gene gain on the X chromosome. Plos Biology. 8. PMID 20957185 DOI: 10.1371/Journal.Pbio.1000494  0.791
2010 Zhang YE, Vibranovski MD, Krinsky BH, Long M. Age-dependent chromosomal distribution of male-biased genes in Drosophila. Genome Research. 20: 1526-33. PMID 20798392 DOI: 10.1101/Gr.107334.110  0.793
2010 Yi X, Liang Y, Huerta-Sanchez E, Jin X, Cuo ZX, Pool JE, Xu X, Jiang H, Vinckenbosch N, Korneliussen TS, Zheng H, Liu T, He W, Li K, Luo R, ... ... Zhang Y, et al. Sequencing of 50 human exomes reveals adaptation to high altitude. Science (New York, N.Y.). 329: 75-8. PMID 20595611 DOI: 10.1126/Science.1190371  0.441
2010 Zhang Y, Schramm VL. Pyrophosphate interactions at the transition states of Plasmodium falciparum and human orotate phosphoribosyltransferases. Journal of the American Chemical Society. 132: 8787-94. PMID 20527751 DOI: 10.1021/Ja102849W  0.391
2010 Abdo M, Zhang Y, Schramm VL, Knapp S. Electrophilic aromatic selenylation: new OPRT inhibitors. Organic Letters. 12: 2982-5. PMID 20521773 DOI: 10.1021/Ol1010032  0.411
2010 Feng L, Liu H, Liu Y, Lu Z, Guo G, Guo S, Zheng H, Gao Y, Cheng S, Wang J, Zhang K, Zhang Y. Power of deep sequencing and agilent microarray for gene expression profiling study. Molecular Biotechnology. 45: 101-10. PMID 20432071 DOI: 10.1007/S12033-010-9249-6  0.374
2010 Wang B, Guo G, Wang C, Lin Y, Wang X, Zhao M, Guo Y, He M, Zhang Y, Pan L. Survey of the transcriptome of Aspergillus oryzae via massively parallel mRNA sequencing. Nucleic Acids Research. 38: 5075-87. PMID 20392818 DOI: 10.1093/Nar/Gkq256  0.335
2010 Li CY, Zhang Y, Wang Z, Zhang Y, Cao C, Zhang PW, Lu SJ, Li XM, Yu Q, Zheng X, Du Q, Uhl GR, Liu QR, Wei L. A human-specific de novo protein-coding gene associated with human brain functions. Plos Computational Biology. 6: e1000734. PMID 20376170 DOI: 10.1371/Journal.Pcbi.1000734  0.383
2010 Zhang G, Guo G, Hu X, Zhang Y, Li Q, Li R, Zhuang R, Lu Z, He Z, Fang X, Chen L, Tian W, Tao Y, Kristiansen K, Zhang X, et al. Deep RNA sequencing at single base-pair resolution reveals high complexity of the rice transcriptome. Genome Research. 20: 646-54. PMID 20305017 DOI: 10.1101/Gr.100677.109  0.359
2010 Raleigh DR, Marchiando AM, Zhang Y, Shen L, Sasaki H, Wang Y, Long M, Turner JR. Tight junction-associated MARVEL proteins marveld3, tricellulin, and occludin have distinct but overlapping functions. Molecular Biology of the Cell. 21: 1200-13. PMID 20164257 DOI: 10.1091/Mbc.E09-08-0734  0.493
2010 Zhang Y, Liu J, Jia C, Li T, Wu R, Wang J, Chen Y, Zou X, Chen R, Wang XJ, Zhu D. Systematic identification and evolutionary features of rhesus monkey small nucleolar RNAs. Bmc Genomics. 11: 61. PMID 20100322 DOI: 10.1186/1471-2164-11-61  0.304
2009 Huang S, Li R, Zhang Z, Li L, Gu X, Fan W, Lucas WJ, Wang X, Xie B, Ni P, Ren Y, Zhu H, Li J, Lin K, Jin W, ... ... Zhang Y, et al. The genome of the cucumber, Cucumis sativus L. Nature Genetics. 41: 1275-81. PMID 19881527 DOI: 10.1038/Ng.475  0.377
2009 Zhang Y, Lu S, Zhao S, Zheng X, Long M, Wei L. Positive selection for the male functionality of a co-retroposed gene in the hominoids. Bmc Evolutionary Biology. 9: 252. PMID 19832993 DOI: 10.1186/1471-2148-9-252  0.598
2009 Zhu Z, Zhang Y, Long M. Extensive structural renovation of retrogenes in the evolution of the Populus genome. Plant Physiology. 151: 1943-51. PMID 19789289 DOI: 10.1104/Pp.109.142984  0.766
2009 Zhang Y, Wang J, Huang S, Zhu X, Liu J, Yang N, Song D, Wu R, Deng W, Skogerbø G, Wang XJ, Chen R, Zhu D. Systematic identification and characterization of chicken (Gallus gallus) ncRNAs. Nucleic Acids Research. 37: 6562-74. PMID 19720738 DOI: 10.1093/nar/gkp704  0.324
2009 Zhang Y, Luo M, Schramm VL. Transition states of Plasmodium falciparum and human orotate phosphoribosyltransferases. Journal of the American Chemical Society. 131: 4685-94. PMID 19292447 DOI: 10.1021/Ja808346Y  0.408
2009 Vibranovski MD, Zhang Y, Long M. General gene movement off the X chromosome in the Drosophila genus. Genome Research. 19: 897-903. PMID 19251740 DOI: 10.1101/Gr.088609.108  0.768
2009 Pan HW, Liu H, Liu T, Li CY, Li ZF, Cai K, Zhang CY, Zhang Y, Hu W, Wu ZH, Li YZ. Seawater-regulated genes for two-component systems and outer membrane proteins in myxococcus. Journal of Bacteriology. 191: 2102-11. PMID 19151139 DOI: 10.1128/Jb.01556-08  0.368
2009 Raleigh DR, Zhang Y, Marchiando AM, Wang Y, Shen L, Long M, Turner JR. S1757 TAMPs: A Tight Junction Protein Family with Non-Redundant Functions Gastroenterology. 136: A-264. DOI: 10.1016/S0016-5085(09)61201-4  0.452
2008 Fan C, Zhang Y, Yu Y, Rounsley S, Long M, Wing RA. The subtelomere of Oryza sativa chromosome 3 short arm as a hot bed of new gene origination in rice. Molecular Plant. 1: 839-50. PMID 19825586 DOI: 10.1093/Mp/Ssn050  0.776
2008 Muir WM, Wong GK, Zhang Y, Wang J, Groenen MA, Crooijmans RP, Megens HJ, Zhang H, Okimoto R, Vereijken A, Jungerius A, Albers GA, Lawley CT, Delany ME, MacEachern S, et al. Genome-wide assessment of worldwide chicken SNP genetic diversity indicates significant absence of rare alleles in commercial breeds. Proceedings of the National Academy of Sciences of the United States of America. 105: 17312-7. PMID 18981413 DOI: 10.1073/Pnas.0806569105  0.301
2008 Zhang Y, Ma F, Wang Y, Yang B, Chen S. Expression of v-cath gene from HearNPV in tobacco confers an antifeedant effect against Helicoverpa armigera. Journal of Biotechnology. 138: 52-5. PMID 18722486 DOI: 10.1016/J.Jbiotec.2008.07.1990  0.308
2008 Wan L, Pi C, Zhang L, Zheng W, Weng L, Chen Z, Zhang Y. Structural diversity of 1,2,4-diazaphospholide complexes with alkali metals. Chemical Communications (Cambridge, England). 2266-8. PMID 18463761 DOI: 10.1039/b800222c  0.492
2008 WANG Z, SONG J, ZHANG Y, YANG B, WANG Y, CHEN S. Mechanism Analysis of Broad-spectrum Disease Resistance Induced by Expression of Anti-apoptotic p35 Gene in Tobacco Chinese Journal of Biotechnology. 24: 1707-1713. DOI: 10.1016/S1872-2075(08)60070-9  0.307
2008 Xiong N, Zhang Y, Wang Y, Yang B, Chen S. Isolation and identification of canine parvovirus serotype 2a and its VP2 protein expression in transgenic tobacco Virologica Sinica. 23: 203-210. DOI: 10.1007/S12250-008-2928-9  0.309
2007 Wang Y, Ding L, Hu Y, Zhang Y, Yang B, Chen S. The flhDC gene affects motility and biofilm formation in Yersinia pseudotuberculosis. Science in China. Series C, Life Sciences / Chinese Academy of Sciences. 50: 814-21. PMID 17973093 DOI: 10.1007/S11427-007-0101-6  0.309
2007 Zhang C, Cai K, Liu H, Zhang Y, Pan H, Wang B, Wu Z, Hu W, Li Y. New locus important for Myxococcus social motility and development. Journal of Bacteriology. 189: 7937-7941. PMID 17720782 DOI: 10.1128/Jb.00942-07  0.305
2007 Zhang Y, Li J, Kong L, Gao G, Liu QR, Wei L. NATsDB: Natural Antisense Transcripts DataBase. Nucleic Acids Research. 35: D156-61. PMID 17082204 DOI: 10.1093/Nar/Gkl782  0.388
2006 Zhang Y, Liu XS, Liu QR, Wei L. Genome-wide in silico identification and analysis of cis natural antisense transcripts (cis-NATs) in ten species. Nucleic Acids Research. 34: 3465-75. PMID 16849434 DOI: 10.1093/Nar/Gkl473  0.372
2006 Ye J, Fang L, Zheng H, Zhang Y, Chen J, Zhang Z, Wang J, Li S, Li R, Bolund L, Wang J. WEGO: a web tool for plotting GO annotations. Nucleic Acids Research. 34: W293-7. PMID 16845012 DOI: 10.1093/Nar/Gkl031  0.454
2006 Cremeens ME, Fujisaki H, Zhang Y, Zimmermann J, Sagle LB, Matsuda S, Dawson PE, Straub JE, Romesberg FE. Efforts toward developing direct probes of protein dynamics. Journal of the American Chemical Society. 128: 6028-9. PMID 16669659 DOI: 10.1021/Ja061328G  0.436
2006 Foster LJ, de Hoog CL, Zhang Y, Zhang Y, Xie X, Mootha VK, Mann M. A mammalian organelle map by protein correlation profiling. Cell. 125: 187-99. PMID 16615899 DOI: 10.1016/J.Cell.2006.03.022  0.32
2005 Yin YB, Zhang Y, Yu P, Luo JC, Jiang Y, Li SG. Comparative study of apoptosis-related gene loci in human, mouse and rat genomes. Acta Biochimica Et Biophysica Sinica. 37: 341-8. PMID 15880263 DOI: 10.1111/J.1745-7270.2005.00043.X  0.38
2005 Yu J, Wang J, Lin W, Li S, Li H, Zhou J, Ni P, Dong W, Hu S, Zeng C, Zhang J, Zhang Y, Li R, Xu Z, Li S, ... ... Zhang Y, ... ... Zhang Y, et al. The Genomes of Oryza sativa: a history of duplications. Plos Biology. 3: e38. PMID 15685292 DOI: 10.1371/Journal.Pbio.0030038  0.545
2005 Wang J, He X, Ruan J, Dai M, Chen J, Zhang Y, Hu Y, Ye C, Li S, Cong L, Fang L, Liu B, Li S, Wang J, Burt DW, et al. ChickVD: a sequence variation database for the chicken genome. Nucleic Acids Research. 33: D438-41. PMID 15608233 DOI: 10.1093/Nar/Gki092  0.447
2004 Chen Y, Zhang Y, Yin Y, Gao G, Li S, Jiang Y, Gu X, Luo J. SPD: a web-based secreted protein database Nucleic Acids Research. 33: 169-173. PMID 15608170 DOI: 10.1093/Nar/Gki093  0.307
2004 Xia Q, Zhou Z, Lu C, Cheng D, Dai F, Li B, Zhao P, Zha X, Cheng T, Chai C, Pan G, Xu J, Liu C, Lin Y, Qian J, ... ... Zhang Y, et al. A draft sequence for the genome of the domesticated silkworm (Bombyx mori). Science (New York, N.Y.). 306: 1937-40. PMID 15591204 DOI: 10.1126/Science.1102210  0.491
2004 Li C, Ni P, Francki M, Hunter A, Zhang Y, Schibeci D, Li H, Tarr A, Wang J, Cakir M, Yu J, Bellgard M, Lance R, Appels R. Genes controlling seed dormancy and pre-harvest sprouting in a rice-wheat-barley comparison. Functional & Integrative Genomics. 4: 84-93. PMID 14770301 DOI: 10.1007/S10142-004-0104-3  0.354
2004 Zhao W, Wang J, He X, Huang X, Jiao Y, Dai M, Wei S, Fu J, Chen Y, Ren X, Zhang Y, Ni P, Zhang J, Li S, Wang J, et al. BGI-RIS: an integrated information resource and comparative analysis workbench for rice genomics. Nucleic Acids Research. 32: D377-82. PMID 14681438 DOI: 10.1093/Nar/Gkh085  0.347
2003 Wang J, Li S, Zhang Y, Zheng H, Xu Z, Ye J, Yu J, Wong GK. Vertebrate gene predictions and the problem of large genes. Nature Reviews. Genetics. 4: 741-9. PMID 12951575 DOI: 10.1038/Nrg1160  0.39
2002 Zhang Y, Yu LX, Jia YB, Wang YB, Yang PL. Establishment of rabbit model of renal allograft transplantation using microsurgical technique Di 1 Jun Yi Da Xue Xue Bao = Academic Journal of the First Medical College of Pla. 22: 713-715. PMID 12376257  0.412
2002 Wang J, Wong GK, Ni P, Han Y, Huang X, Zhang J, Ye C, Zhang Y, Hu J, Zhang K, Xu X, Cong L, Lu H, Ren X, Ren X, et al. RePS: a sequence assembler that masks exact repeats identified from the shotgun data. Genome Research. 12: 824-31. PMID 11997349 DOI: 10.1101/Gr.165102  0.302
2002 Yu J, Hu S, Wang J, Wong GK, Li S, Liu B, Deng Y, Dai L, Zhou Y, Zhang X, Cao M, Liu J, Sun J, Tang J, Chen Y, ... ... Zhang Y, et al. A draft sequence of the rice genome (Oryza sativa L. ssp. indica). Science (New York, N.Y.). 296: 79-92. PMID 11935017 DOI: 10.1126/Science.1068037  0.381
Show low-probability matches.