| Year |
Citation |
Score |
| 2023 |
Brooks EG, Elorriaga E, Liu Y, Duduit JR, Yuan G, Tsai CJ, Tuskan GA, Ranney TG, Yang X, Liu W. Plant Promoters and Terminators for High-Precision Bioengineering. Biodesign Research. 5: 0013. PMID 37849460 DOI: 10.34133/bdr.0013 |
0.337 |
|
| 2023 |
Yao T, Zhang J, Yates TB, Shrestha HK, Engle NL, Ployet R, John C, Feng K, Bewg WP, Chen MSS, Lu H, Harding SA, Qiao Z, Jawdy SS, Shu M, ... ... Tsai CJ, et al. Expression quantitative trait loci mapping identified PtrXB38 as a key hub gene in adventitious root development in Populus. The New Phytologist. PMID 37488708 DOI: 10.1111/nph.19126 |
0.381 |
|
| 2023 |
Tran S, Ison M, Ferreira Dias NC, Ortega MA, Chen YS, Peper A, Hu L, Xu D, Mozaffari K, Severns PM, Yao Y, Tsai CJ, Teixeira PJPL, Yang L. Endogenous salicylic acid suppresses de novo root regeneration from leaf explants. Plos Genetics. 19: e1010636. PMID 36857386 DOI: 10.1371/journal.pgen.1010636 |
0.338 |
|
| 2023 |
Ullah C, Chen YH, Ortega MA, Tsai CJ. The diversity of salicylic acid biosynthesis and defense signaling in plants: Knowledge gaps and future opportunities. Current Opinion in Plant Biology. 72: 102349. PMID 36842224 DOI: 10.1016/j.pbi.2023.102349 |
0.319 |
|
| 2020 |
Harding SA, Frost CJ, Tsai CJ. Defoliation-induced compensatory transpiration is compromised in -RNAi . Plant Direct. 4: e00268. PMID 33015535 DOI: 10.1002/pld3.268 |
0.324 |
|
| 2020 |
Tsai CJ, Xu P, Xue LJ, Hu H, Nyamdari B, Naran R, Zhou X, Goeminne G, Gao R, Gjersing E, Dahlen J, Pattathil S, Hahn MG, Davis M, Ralph J, et al. Compensatory guaiacyl lignin biosynthesis at the expense of syringyl lignin in 4CL1-knockout poplar. Plant Physiology. PMID 32139476 DOI: 10.1104/Pp.19.01550 |
0.39 |
|
| 2019 |
Heyduk K, Ray JN, Ayyampalayam S, Moledina N, Borland A, Harding SA, Tsai CJ, Leebens-Mack J. Shared expression of Crassulacean acid metabolism (CAM) genes predates the origin of CAM in the genus Yucca. Journal of Experimental Botany. PMID 30870557 DOI: 10.1093/Jxb/Erz105 |
0.477 |
|
| 2018 |
Ullah C, Tsai CJ, Unsicker SB, Xue L, Reichelt M, Gershenzon J, Hammerbacher A. Salicylic acid activates poplar defense against the biotrophic rust fungus Melampsora larici-populina via increased biosynthesis of catechin and proanthocyanidins. The New Phytologist. PMID 30168132 DOI: 10.1111/Nph.15396 |
0.36 |
|
| 2017 |
Harding SA, Hu H, Nyamdari B, Xue LJ, Naran R, Tsai CJ. Tubulins, rhythms and cell walls in poplar leaves: it's all in the timing. Tree Physiology. 1-12. PMID 28927239 DOI: 10.1093/Treephys/Tpx104 |
0.445 |
|
| 2017 |
Zhao H, Jiang J, Li K, Liu G, Tsai CJ. Populus simonii × Populus nigra WRKY70 is involved in salt stress and leaf blight disease responses. Tree Physiology. 1-18. PMID 28369503 DOI: 10.1093/treephys/tpx020 |
0.333 |
|
| 2016 |
Hu H, Gu X, Xue LJ, Swamy PS, Harding SA, Tsai CJ. Tubulin C-terminal Post-translational Modifications Do Not Occur in Wood Forming Tissue of Populus. Frontiers in Plant Science. 7: 1493. PMID 27790223 DOI: 10.3389/Fpls.2016.01493 |
0.407 |
|
| 2016 |
Xue LJ, Frost CJ, Tsai CJ, Harding SA. Drought response transcriptomes are altered in poplar with reduced tonoplast sucrose transporter expression. Scientific Reports. 6: 33655. PMID 27641356 DOI: 10.1038/Srep33655 |
0.486 |
|
| 2015 |
Mason CM, Bowsher AW, Crowell BL, Celoy RM, Tsai CJ, Donovan LA. Macroevolution of leaf defenses and secondary metabolites across the genus Helianthus. The New Phytologist. PMID 26583880 DOI: 10.1111/Nph.13749 |
0.375 |
|
| 2015 |
Xue LJ, Tsai CJ. AGEseq: Analysis of Genome Editing by Sequencing. Molecular Plant. PMID 26057235 DOI: 10.1016/J.Molp.2015.06.001 |
0.329 |
|
| 2015 |
Bowsher AW, Ali R, Harding SA, Tsai CJ, Donovan LA. Analysis of wild sunflower (Helianthus annuus L.) root exudates using gas chromatography-mass spectrometry Journal of Plant Nutrition and Soil Science. DOI: 10.1002/Jpln.201400521 |
0.362 |
|
| 2014 |
Peng D, Gu X, Xue LJ, Leebens-Mack JH, Tsai CJ. Bayesian phylogeny of sucrose transporters: ancient origins, differential expansion and convergent evolution in monocots and dicots. Frontiers in Plant Science. 5: 615. PMID 25429293 DOI: 10.3389/Fpls.2014.00615 |
0.354 |
|
| 2014 |
Chen HY, Babst BA, Nyamdari B, Hu H, Sykes R, Davis MF, Harding SA, Tsai CJ. Ectopic expression of a loblolly pine class II 4-coumarate:CoA ligase alters soluble phenylpropanoid metabolism but not lignin biosynthesis in Populus. Plant & Cell Physiology. 55: 1669-78. PMID 25016610 DOI: 10.1093/Pcp/Pcu098 |
0.369 |
|
| 2014 |
Babst BA, Chen HY, Wang HQ, Payyavula RS, Thomas TP, Harding SA, Tsai CJ. Stress-responsive hydroxycinnamate glycosyltransferase modulates phenylpropanoid metabolism in Populus. Journal of Experimental Botany. 65: 4191-200. PMID 24803501 DOI: 10.1093/Jxb/Eru192 |
0.782 |
|
| 2014 |
Harding SA, Xue LJ, Du L, Nyamdari B, Lindroth RL, Sykes R, Davis MF, Tsai CJ. Condensed tannin biosynthesis and polymerization synergistically condition carbon use, defense, sink strength and growth in Populus. Tree Physiology. 34: 1240-51. PMID 24336515 DOI: 10.1093/Treephys/Tpt097 |
0.414 |
|
| 2014 |
da Silva Taveira JH, Borém FM, Figueiredo LP, Reis N, Franca AS, Harding SA, Tsai C. Potential markers of coffee genotypes grown in different Brazilian regions: A metabolomics approach Food Research International. 61: 75-82. DOI: 10.1016/J.Foodres.2014.02.048 |
0.312 |
|
| 2013 |
Wang HQ, Tsai CJ. CorSig: a general framework for estimating statistical significance of correlation and its application to gene co-expression analysis. Plos One. 8: e77429. PMID 24194884 DOI: 10.1371/Journal.Pone.0077429 |
0.324 |
|
| 2013 |
Xu Y, Chen CF, Thomas TP, Azadi P, Diehl B, Tsai CJ, Brown N, Carlson JE, Tien M, Liang H. Wood chemistry analysis and expression profiling of a poplar clone expressing a tyrosine-rich peptide. Plant Cell Reports. 32: 1827-41. PMID 24013761 DOI: 10.1007/S00299-013-1496-0 |
0.468 |
|
| 2013 |
Xue LJ, Guo W, Yuan Y, Anino EO, Nyamdari B, Wilson MC, Frost CJ, Chen HY, Babst BA, Harding SA, Tsai CJ. Constitutively elevated salicylic acid levels alter photosynthesis and oxidative state but not growth in transgenic populus. The Plant Cell. 25: 2714-30. PMID 23903318 DOI: 10.1105/Tpc.113.112839 |
0.73 |
|
| 2013 |
Molina-Rueda JJ, Tsai CJ, Kirby EG. The Populus Superoxide Dismutase Gene Family and Its Responses to Drought Stress in Transgenic Poplar Overexpressing a Pine Cytosolic Glutamine Synthetase (GS1a) Plos One. 8. PMID 23451045 DOI: 10.1371/journal.pone.0056421 |
0.35 |
|
| 2013 |
Tsai CJ, Harding SA. In situ hybridization. Methods in Cell Biology. 113: 339-59. PMID 23317910 DOI: 10.1016/B978-0-12-407239-8.00016-1 |
0.327 |
|
| 2012 |
Barron MJ, Goldman J, Tsai CJ, Donahue SW. Perfusion flow enhances osteogenic gene expression and the infiltration of osteoblasts and endothelial cells into three-dimensional calcium phosphate scaffolds. International Journal of Biomaterials. 2012: 915620. PMID 22988460 DOI: 10.1155/2012/915620 |
0.303 |
|
| 2012 |
Frost CJ, Nyamdari B, Tsai CJ, Harding SA. The tonoplast-localized sucrose transporter in Populus (PtaSUT4) regulates whole-plant water relations, responses to water stress, and photosynthesis. Plos One. 7: e44467. PMID 22952983 DOI: 10.1371/Journal.Pone.0044467 |
0.427 |
|
| 2011 |
Tuominen LK, Johnson VE, Tsai CJ. Differential phylogenetic expansions in BAHD acyltransferases across five angiosperm taxa and evidence of divergent expression among Populus paralogues. Bmc Genomics. 12: 236. PMID 21569431 DOI: 10.1186/1471-2164-12-236 |
0.475 |
|
| 2011 |
Payyavula RS, Tay KH, Tsai CJ, Harding SA. The sucrose transporter family in Populus: the importance of a tonoplast PtaSUT4 to biomass and carbon partitioning. The Plant Journal : For Cell and Molecular Biology. 65: 757-70. PMID 21261761 DOI: 10.1111/J.1365-313X.2010.04463.X |
0.781 |
|
| 2011 |
Harding S, Frost C, Payyavula R, Tay KH, Tsai C. Partial suppression of a strongly expressed tonoplast sucrose transporter affects water use and carbon partitioning in Populus Bmc Proceedings. 5. DOI: 10.1186/1753-6561-5-S7-P111 |
0.778 |
|
| 2010 |
Wegrzyn JL, Eckert AJ, Choi M, Lee JM, Stanton BJ, Sykes R, Davis MF, Tsai CJ, Neale DB. Association genetics of traits controlling lignin and cellulose biosynthesis in black cottonwood (Populus trichocarpa, Salicaceae) secondary xylem. The New Phytologist. 188: 515-32. PMID 20831625 DOI: 10.1111/J.1469-8137.2010.03415.X |
0.301 |
|
| 2010 |
Babst BA, Harding SA, Tsai CJ. Biosynthesis of phenolic glycosides from phenylpropanoid and benzenoid precursors in populus. Journal of Chemical Ecology. 36: 286-97. PMID 20177744 DOI: 10.1007/S10886-010-9757-7 |
0.329 |
|
| 2009 |
Payyavula RS, Babst BA, Nelsen MP, Harding SA, Tsai CJ. Glycosylation-mediated phenylpropanoid partitioning in Populus tremuloides cell cultures. Bmc Plant Biology. 9: 151. PMID 20040108 DOI: 10.1186/1471-2229-9-151 |
0.721 |
|
| 2009 |
Yuan Y, Chung JD, Fu X, Johnson VE, Ranjan P, Booth SL, Harding SA, Tsai CJ. Alternative splicing and gene duplication differentially shaped the regulation of isochorismate synthase in Populus and Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. 106: 22020-5. PMID 19996170 DOI: 10.1073/Pnas.0906869106 |
0.342 |
|
| 2009 |
Harding SA, Jarvie MM, Lindroth RL, Tsai CJ. A comparative analysis of phenylpropanoid metabolism, N utilization, and carbon partitioning in fast- and slow-growing Populus hybrid clones. Journal of Experimental Botany. 60: 3443-52. PMID 19516073 DOI: 10.1093/Jxb/Erp180 |
0.457 |
|
| 2009 |
Cseke LJ, Tsai CJ, Rogers A, Nelsen MP, White HL, Karnosky DF, Podila GK. Transcriptomic comparison in the leaves of two aspen genotypes having similar carbon assimilation rates but different partitioning patterns under elevated [CO2]. The New Phytologist. 182: 891-911. PMID 19383098 DOI: 10.1111/J.1469-8137.2009.02812.X |
0.343 |
|
| 2009 |
Huang Z, Tsai C, Harding SA, Meilan R, Woeste K. A Cross-species Transcriptional Profile Analysis of Heartwood Formation in Black Walnut Plant Molecular Biology Reporter. 28: 222-230. DOI: 10.1007/S11105-009-0144-X |
0.395 |
|
| 2008 |
Qin H, Feng T, Harding SA, Tsai CJ, Zhang S. An efficient method to identify differentially expressed genes in microarray experiments. Bioinformatics (Oxford, England). 24: 1583-9. PMID 18453554 DOI: 10.1093/Bioinformatics/Btn215 |
0.36 |
|
| 2008 |
Luo K, Harding SA, Tsai CJ. A modified T-vector for simplified assembly of hairpin RNAi constructs. Biotechnology Letters. 30: 1271-4. PMID 18317701 DOI: 10.1007/S10529-008-9673-X |
0.308 |
|
| 2007 |
Oakley RV, Wang YS, Ramakrishna W, Harding SA, Tsai CJ. Differential expansion and expression of alpha- and beta-tubulin gene families in Populus. Plant Physiology. 145: 961-73. PMID 17885081 DOI: 10.1104/Pp.107.107086 |
0.772 |
|
| 2007 |
Tiimonen H, Häggman H, Tsai CJ, Chiang V, Aronen T. The seasonal activity and the effect of mechanical bending and wounding on the PtCOMT promoter in Betula pendula Roth. Plant Cell Reports. 26: 1205-14. PMID 17431633 DOI: 10.1007/S00299-007-0331-X |
0.443 |
|
| 2007 |
Rajinikanth M, Harding SA, Tsai CJ. The glycine decarboxylase complex multienzyme family in Populus. Journal of Experimental Botany. 58: 1761-70. PMID 17355947 DOI: 10.1093/Jxb/Erm034 |
0.681 |
|
| 2006 |
Tsai CJ, Harding SA, Tschaplinski TJ, Lindroth RL, Yuan Y. Genome-wide analysis of the structural genes regulating defense phenylpropanoid metabolism in Populus. The New Phytologist. 172: 47-62. PMID 16945088 DOI: 10.1111/J.1469-8137.2006.01798.X |
0.462 |
|
| 2006 |
Brodeur-Campbell SE, Vucetich JA, Richter DL, Waite TA, Rosemier JN, Tsai C. Insect Herbivory on Low-Lignin Transgenic Aspen Environmental Entomology. 35: 1696-1701. DOI: 10.1603/0046-225X(2006)35[1696:Iholta]2.0.Co;2 |
0.318 |
|
| 2005 |
Harding SA, Jiang H, Jeong ML, Casado FL, Lin HW, Tsai CJ. Functional genomics analysis of foliar condensed tannin and phenolic glycoside regulation in natural cottonwood hybrids. Tree Physiology. 25: 1475-86. PMID 16137933 DOI: 10.1093/Treephys/25.12.1475 |
0.402 |
|
| 2004 |
Jeong ML, Jiang H, Chen HS, Tsai CJ, Harding SA. Metabolic profiling of the sink-to-source transition in developing leaves of quaking aspen. Plant Physiology. 136: 3364-75. PMID 15448196 DOI: 10.1104/Pp.104.044776 |
0.407 |
|
| 2004 |
Jiang H, Deng Y, Chen HS, Tao L, Sha Q, Chen J, Tsai CJ, Zhang S. Joint analysis of two microarray gene-expression data sets to select lung adenocarcinoma marker genes. Bmc Bioinformatics. 5: 81. PMID 15217521 DOI: 10.1186/1471-2105-5-81 |
0.332 |
|
| 2004 |
Ranjan P, Kao YY, Jiang H, Joshi CP, Harding SA, Tsai CJ. Suppression subtractive hybridization-mediated transcriptome analysis from multiple tissues of aspen (Populus tremuloides) altered in phenylpropanoid metabolism. Planta. 219: 694-704. PMID 15146331 DOI: 10.1007/S00425-004-1291-9 |
0.78 |
|
| 2004 |
Wang YS, Harding SA, Tsai CJ. Expression of a glycine decarboxylase complex H-protein in non-photosynthetic tissues of Populus tremuloides. Biochimica Et Biophysica Acta. 1676: 266-72. PMID 14984933 DOI: 10.1016/J.Bbaexp.2003.12.004 |
0.782 |
|
| 2004 |
Tsai C, Hubscher SL. Cryopreservation in Populus functional genomics New Phytologist. 164: 73-81. DOI: 10.1111/J.1469-8137.2004.01150.X |
0.322 |
|
| 2002 |
Kao YY, Harding SA, Tsai CJ. Differential expression of two distinct phenylalanine ammonia-lyase genes in condensed tannin-accumulating and lignifying cells of quaking aspen. Plant Physiology. 130: 796-807. PMID 12376645 DOI: 10.1104/Pp.006262 |
0.771 |
|
| 1999 |
Hu WJ, Harding SA, Lung J, Popko JL, Ralph J, Stokke DD, Tsai CJ, Chiang VL. Repression of lignin biosynthesis promotes cellulose accumulation and growth in transgenic trees. Nature Biotechnology. 17: 808-12. PMID 10429249 DOI: 10.1038/11758 |
0.753 |
|
| 1998 |
Hu WJ, Kawaoka A, Tsai CJ, Lung J, Osakabe K, Ebinuma H, Chiang VL. Compartmentalized expression of two structurally and functionally distinct 4-coumarate:CoA ligase genes in aspen (Populus tremuloides). Proceedings of the National Academy of Sciences of the United States of America. 95: 5407-12. PMID 9560289 DOI: 10.1073/Pnas.95.9.5407 |
0.787 |
|
| 1998 |
Tsai CJ, Popko JL, Mielke MR, Hu WJ, Podila GK, Chiang VL. Suppression of O-methyltransferase gene by homologous sense transgene in quaking aspen causes red-brown wood phenotypes Plant Physiology. 117: 101-112. DOI: 10.1104/Pp.117.1.101 |
0.507 |
|
| 1997 |
Li L, Popko JL, Zhang XH, Osakabe K, Tsai CJ, Joshi CP, Chiang VL. A novel multifunctional O-methyltransferase implicated in a dual methylation pathway associated with lignin biosynthesis in loblolly pine. Proceedings of the National Academy of Sciences of the United States of America. 94: 5461-6. PMID 9144260 DOI: 10.1073/Pnas.94.10.5461 |
0.383 |
|
| 1996 |
Tsai CJ, Mielke MR, Podila GK, Chiang VL. 3' cycle-labeled oligonucleotides with predictable length for primer extension and transgene analysis Nucleic Acids Research. 24: 5060-5061. PMID 9016684 DOI: 10.1093/Nar/24.24.5060 |
0.309 |
|
| 1994 |
Tsai CJ, Podila GK, Chiang VL. Agrobacterium-mediated transformation of quaking aspen (Populus tremuloides) and regeneration of transgenic plants Plant Cell Reports. 14: 94-97. DOI: 10.1007/Bf00233768 |
0.476 |
|
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