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Christophe Geourjon - Publications

Affiliations: 
Universite Lyon 1, Villeurbanne, Auvergne-Rhône-Alpes, France 
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44 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2011 Paramelle D, Enjalbal C, Amblard M, Forest E, Heymann M, Cantel S, Geourjon C, Martinez J, Subra G. Solid-Phase Cross-Linking (SPCL): a new tool for protein structure studies. Proteomics. 11: 1277-86. PMID 21319301 DOI: 10.1002/Pmic.201000029  0.691
2009 Paramelle D, Cantel S, Enjalbal C, Amblard M, Forest E, Heymann M, Geourjon C, Martinez J, Subra G. A new generation of cross-linkers for selective detection by MALDI MS. Proteomics. 9: 5384-8. PMID 19902427 DOI: 10.1002/Pmic.200900562  0.618
2008 Heymann M, Paramelle D, Subra G, Forest E, Martinez J, Geourjon C, Deléage G. MSX-3D: a tool to validate 3D protein models using mass spectrometry. Bioinformatics (Oxford, England). 24: 2782-3. PMID 18826958 DOI: 10.1093/Bioinformatics/Btn510  0.775
2007 Lascoux D, Paramelle D, Subra G, Heymann M, Geourjon C, Martinez J, Forest E. Discrimination and selective enhancement of signals in the MALDI mass spectrum of a protein by combining a matrix-based label for lysine residues with a neutral matrix. Angewandte Chemie (International Ed. in English). 46: 5594-7. PMID 17591739 DOI: 10.1002/Anie.200700811  0.633
2007 Combet C, Garnier N, Charavay C, Grando D, Crisan D, Lopez J, Dehne-Garcia A, Geourjon C, Bettler E, Hulo C, Le Mercier P, Bartenschlager R, Diepolder H, Moradpour D, Pawlotsky JM, et al. euHCVdb: the European hepatitis C virus database. Nucleic Acids Research. 35: D363-6. PMID 17142229 DOI: 10.1093/Nar/Gkl970  0.782
2006 Aouacheria A, Geourjon C, Aghajari N, Navratil V, Deléage G, Lethias C, Exposito JY. Insights into early extracellular matrix evolution: spongin short chain collagen-related proteins are homologous to basement membrane type IV collagens and form a novel family widely distributed in invertebrates. Molecular Biology and Evolution. 23: 2288-302. PMID 16945979 DOI: 10.1093/molbev/msl100  0.634
2006 Garnier N, Friedrich A, Bolze R, Bettler E, Moulinier L, Geourjon C, Thompson JD, Deléage G, Poch O. MAGOS: multiple alignment and modelling server. Bioinformatics (Oxford, England). 22: 2164-5. PMID 16820425 DOI: 10.1093/Bioinformatics/Btl349  0.802
2006 Kuiken C, Mizokami M, Deleage G, Yusim K, Penin F, Shin-I T, Charavay C, Tao N, Crisan D, Grando D, Dalwani A, Geourjon C, Agrawal A, Combet C. Hepatitis C databases, principles and utility to researchers. Hepatology (Baltimore, Md.). 43: 1157-65. PMID 16628639 DOI: 10.1002/Hep.21162  0.773
2006 Soulat D, Jault JM, Duclos B, Geourjon C, Cozzone AJ, Grangeasse C. Staphylococcus aureus operates protein-tyrosine phosphorylation through a specific mechanism. The Journal of Biological Chemistry. 281: 14048-56. PMID 16565080 DOI: 10.1074/Jbc.M513600200  0.368
2005 Jambon M, Andrieu O, Combet C, Deléage G, Delfaud F, Geourjon C. The SuMo server: 3D search for protein functional sites. Bioinformatics (Oxford, England). 21: 3929-30. PMID 16141250 DOI: 10.1093/Bioinformatics/Bti645  0.782
2005 Aubourg S, Brunaud V, Bruyère C, Cock M, Cooke R, Cottet A, Couloux A, Déhais P, Deléage G, Duclert A, Echeverria M, Eschbach A, Falconet D, Filippi G, Gaspin C, ... Geourjon C, et al. GeneFarm, structural and functional annotation of Arabidopsis gene and protein families by a network of experts. Nucleic Acids Research. 33: D641-6. PMID 15608279 DOI: 10.1093/Nar/Gki115  0.339
2005 Michel S, Collomb-Clerc E, Geourjon C, Charrier JP, Passagot J, Courty Y, Deléage G, Jolivet-Reynaud C. Selective recognition of enzymatically active prostate-specific antigen (PSA) by anti-PSA monoclonal antibodies. Journal of Molecular Recognition : Jmr. 18: 225-35. PMID 15593306 DOI: 10.1002/Jmr.729  0.598
2004 Combet C, Penin F, Geourjon C, Deléage G. HCVDB: hepatitis C virus sequences database. Applied Bioinformatics. 3: 237-40. PMID 15702954 DOI: 10.2165/00822942-200403040-00005  0.791
2003 Errami M, Geourjon C, Deléage G. Conservation of amino acids into multiple alignments involved in pairwise interactions in three-dimensional protein structures. Journal of Bioinformatics and Computational Biology. 1: 505-520. PMID 15307241 DOI: 10.1142/S0219720003000228  0.805
2003 Jambon M, Imberty A, Deléage G, Geourjon C. A new bioinformatic approach to detect common 3D sites in protein structures. Proteins. 52: 137-45. PMID 12833538 DOI: 10.1002/Prot.10339  0.732
2003 Perrière G, Combet C, Penel S, Blanchet C, Thioulouse J, Geourjon C, Grassot J, Charavay C, Gouy M, Duret L, Deléage G. Integrated databanks access and sequence/structure analysis services at the PBIL. Nucleic Acids Research. 31: 3393-9. PMID 12824334 DOI: 10.1093/Nar/Gkg530  0.813
2003 Errami M, Geourjon C, Deléage G. Detection of unrelated proteins in sequences multiple alignments by using predicted secondary structures. Bioinformatics (Oxford, England). 19: 506-12. PMID 12611806 DOI: 10.1093/Bioinformatics/Btg016  0.813
2003 Bernocco S, Steiglitz BM, Svergun DI, Petoukhov MV, Ruggiero F, Ricard-Blum S, Ebel C, Geourjon C, Deleage G, Font B, Eichenberger D, Greenspan DS, Hulmes DJ. Low resolution structure determination shows procollagen C-proteinase enhancer to be an elongated multidomain glycoprotein. The Journal of Biological Chemistry. 278: 7199-205. PMID 12486138 DOI: 10.1074/jbc.M210857200  0.637
2002 Lalle P, Aouacheria A, Dumont-Miscopein A, Jambon M, Venet S, Bobichon H, Colas P, Deléage G, Geourjon C, Gillet G. Evidence for crucial electrostatic interactions between Bcl-2 homology domains BH3 and BH4 in the anti-apoptotic Nr-13 protein. The Biochemical Journal. 368: 213-21. PMID 12133006 DOI: 10.1042/BJ20020836  0.613
2002 Combet C, Jambon M, Deléage G, Geourjon C. Geno3D: automatic comparative molecular modelling of protein. Bioinformatics (Oxford, England). 18: 213-4. PMID 11836238 DOI: 10.1093/Bioinformatics/18.1.213  0.802
2002 Galinier A, Lavergne JP, Geourjon C, Fieulaine S, Nessler S, Jault JM. A new family of phosphotransferases with a P-loop motif. The Journal of Biological Chemistry. 277: 11362-7. PMID 11796714 DOI: 10.1074/Jbc.M109527200  0.338
2002 Combet C, Penin F, Geourjon C, Deléage G. HCVDB : base de données de séquences du virus de l’hépatite C et outils bio-informatiques d’analyse MéDecine/Sciences. 18: 639-639. DOI: 10.1051/Medsci/2002185639  0.753
2001 Geourjon C, Orelle C, Steinfels E, Blanchet C, Deléage G, Di Pietro A, Jault JM. A common mechanism for ATP hydrolysis in ABC transporter and helicase superfamilies. Trends in Biochemical Sciences. 26: 539-44. PMID 11551790 DOI: 10.1016/S0968-0004(01)01907-7  0.66
2001 Deléage G, Combet C, Blanchet C, Geourjon C. ANTHEPROT: an integrated protein sequence analysis software with client/server capabilities. Computers in Biology and Medicine. 31: 259-67. PMID 11334635 DOI: 10.1016/S0010-4825(01)00008-7  0.791
2001 Geourjon C, Combet C, Blanchet C, Deléage G. Identification of related proteins with weak sequence identity using secondary structure information. Protein Science : a Publication of the Protein Society. 10: 788-97. PMID 11274470 DOI: 10.1110/Ps.30001  0.821
2000 Blanchet C, Combet C, Geourjon C, Deléage G. MPSA: integrated system for multiple protein sequence analysis with client/server capabilities. Bioinformatics (Oxford, England). 16: 286-7. PMID 10869021 DOI: 10.1093/Bioinformatics/16.3.286  0.801
2000 Combet C, Blanchet C, Geourjon C, Deléage G. NPS@: network protein sequence analysis. Trends in Biochemical Sciences. 25: 147-50. PMID 10694887 DOI: 10.1016/S0968-0004(99)01540-6  0.795
2000 Deléage G, Geourjon C. Des protéines en 3D Biofutur. 2000: 64-65. DOI: 10.1016/S0294-3506(00)90086-3  0.648
1999 Guermeur Y, Geourjon C, Gallinari P, Deléage G. Improved performance in protein secondary structure prediction by inhomogeneous score combination. Bioinformatics (Oxford, England). 15: 413-21. PMID 10366661 DOI: 10.1093/Bioinformatics/15.5.413  0.685
1999 Morel F, Gilbert C, Geourjon C, Frot-Coutaz J, Portalier R, Atlan D. The prolyl aminopeptidase from Lactobacillus delbrueckii subsp. bulgaricus belongs to the alpha/beta hydrolase fold family. Biochimica Et Biophysica Acta. 1429: 501-5. PMID 9989236 DOI: 10.1016/S0167-4838(98)00264-7  0.345
1997 Deléage G, Blanchet C, Geourjon C. Protein structure prediction. Implications for the biologist. Biochimie. 79: 681-6. PMID 9479451 DOI: 10.1016/S0300-9084(97)83524-9  0.733
1997 Penin F, Geourjon C, Montserret R, Böckmann A, Lesage A, Yang YS, Bonod-Bidaud C, Cortay JC, Nègre D, Cozzone AJ, Deléage G. Three-dimensional structure of the DNA-binding domain of the fructose repressor from Escherichia coli by 1H and 15N NMR. Journal of Molecular Biology. 270: 496-510. PMID 9237914 DOI: 10.1006/Jmbi.1997.1123  0.668
1996 Nègre D, Bonod-Bidaud C, Geourjon C, Deléage G, Cozzone AJ, Cortay JC. Definition of a consensus DNA-binding site for the Escherichia coli pleiotropic regulatory protein, FruR. Molecular Microbiology. 21: 257-66. PMID 8858581 DOI: 10.1046/J.1365-2958.1996.6341350.X  0.659
1996 Geourjon C, Deléage G. SOPMA: significant improvements in protein secondary structure prediction by consensus prediction from multiple alignments. Computer Applications in the Biosciences : Cabios. 11: 681-4. PMID 8808585 DOI: 10.1093/Bioinformatics/11.6.681  0.701
1996 Lesage A, Penin F, Geourjon C, Marion D, van der Rest M. Trimeric assembly and three-dimensional structure model of the FACIT collagen COL1-NC1 junction from CD and NMR analysis. Biochemistry. 35: 9647-60. PMID 8703936 DOI: 10.1021/Bi952666P  0.345
1996 Fischer C, Geourjon C, Bourson C, Deutscher J. Cloning and characterization of the Bacillus subtilis prkA gene encoding a novel serine protein kinase. Gene. 168: 55-60. PMID 8626065 DOI: 10.1016/0378-1119(95)00758-X  0.432
1995 Geourjon C, Deléage G. ANTHEPROT 2.0: a three-dimensional module fully coupled with protein sequence analysis methods. Journal of Molecular Graphics. 13: 209-12, 199-200. PMID 7577848 DOI: 10.1016/0263-7855(95)00035-5  0.4
1994 Geourjon C, Deléage G. SOPM: a self-optimized method for protein secondary structure prediction. Protein Engineering. 7: 157-64. PMID 8170919 DOI: 10.1093/Protein/7.2.157  0.736
1994 Ruggiero-Lopez D, Manioc C, Geourjon C, Louisot P, Martin A. Purification and partial amino acid sequence of fuctinin, an endogenous inhibitor of fucosyltransferase activities. European Journal of Biochemistry. 224: 47-55. PMID 8076650 DOI: 10.1111/J.1432-1033.1994.Tb19993.X  0.423
1994 Moradi-Améli M, Deléage G, Geourjon C, van der Rest M. Common topology within a non-collagenous domain of several different collagen types. Matrix Biology : Journal of the International Society For Matrix Biology. 14: 233-9. PMID 7921540 DOI: 10.1016/0945-053X(94)90187-2  0.606
1993 Deléage G, Geourjon C. An interactive graphic program for calculating the secondary structure content of proteins from circular dichroism spectrum. Computer Applications in the Biosciences : Cabios. 9: 197-9. PMID 8481823 DOI: 10.1093/Bioinformatics/9.2.197  0.664
1993 Geourjon C, Deléage G. Interactive and graphic coupling between multiple alignments, secondary structure predictions and motif/pattern scanning into proteins. Computer Applications in the Biosciences : Cabios. 9: 87-91. PMID 8435773 DOI: 10.1093/bioinformatics/9.1.87  0.373
1992 Geourjon C, Deléage G, Roux B. ANTHEPROT: an interactive graphics software for analyzing protein structures from sequences. Journal of Molecular Graphics. 9: 188-90, 167. PMID 1772842 DOI: 10.1016/0263-7855(91)80008-N  0.404
1992 Reymond P, Geourjon C, Roux B, Durand R, Fevre M. Sequence of the phosphoenolpyruvate carboxykinase-encoding cDNA from the rumen anaerobic fungus Neocallimastix frontalis: comparison of the amino acid sequence with animals and yeast. Gene. 110: 57-63. PMID 1339359 DOI: 10.1016/0378-1119(92)90444-T  0.457
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