| Year |
Citation |
Score |
| 2023 |
Schrom E, Kinzig A, Forrest S, Graham AL, Levin SA, Bergstrom CT, Castillo-Chavez C, Collins JP, de Boer RJ, Doupé A, Ensafi R, Feldman S, Grenfell BT, Halderman JA, Huijben S, ... ... Plotkin J, et al. Challenges in cybersecurity: Lessons from biological defense systems. Mathematical Biosciences. 109024. PMID 37270102 DOI: 10.1016/j.mbs.2023.109024 |
0.507 |
|
| 2023 |
Cooney DB, Levin SA, Mori Y, Plotkin JB. Evolutionary dynamics within and among competing groups. Proceedings of the National Academy of Sciences of the United States of America. 120: e2216186120. PMID 37155901 DOI: 10.1073/pnas.2216186120 |
0.56 |
|
| 2020 |
Tilman AR, Plotkin JB, Akçay E. Evolutionary games with environmental feedbacks. Nature Communications. 11: 915. PMID 32060275 DOI: 10.1038/S41467-020-14531-6 |
0.629 |
|
| 2019 |
Carja O, Plotkin JB. Evolutionary Rescue Through Partly Heritable Phenotypic Variability. Genetics. PMID 30696715 DOI: 10.1534/Genetics.118.301758 |
0.382 |
|
| 2018 |
Posfai A, Zhou J, Plotkin JB, Kinney JB, McCandlish DM. Selection for Protein Stability Enriches for Epistatic Interactions. Genes. 9. PMID 30134605 DOI: 10.3390/Genes9090423 |
0.338 |
|
| 2018 |
Mittal P, Brindle J, Stephen J, Plotkin JB, Kudla G. Codon usage influences fitness through RNA toxicity. Proceedings of the National Academy of Sciences of the United States of America. PMID 30082392 DOI: 10.1073/Pnas.1810022115 |
0.335 |
|
| 2018 |
Otwinowski J, McCandlish DM, Plotkin JB. Inferring the shape of global epistasis. Proceedings of the National Academy of Sciences of the United States of America. 115: E7550-E7558. PMID 30037990 DOI: 10.1073/Pnas.1804015115 |
0.344 |
|
| 2017 |
Gulisija D, Plotkin JB. Phenotypic plasticity promotes recombination and gene clustering in periodic environments. Nature Communications. 8: 2041. PMID 29229921 DOI: 10.1038/S41467-017-01952-Z |
0.365 |
|
| 2017 |
Newberry MG, Ahern CA, Clark R, Plotkin JB. Detecting evolutionary forces in language change. Nature. PMID 29088703 DOI: 10.1038/Nature24455 |
0.322 |
|
| 2017 |
Carja O, Xing T, Wallace EWJ, Plotkin JB, Shah P. riboviz: analysis and visualization of ribosome profiling datasets. Bmc Bioinformatics. 18: 461. PMID 29070028 DOI: 10.1186/S12859-017-1873-8 |
0.738 |
|
| 2017 |
Plotkin JB. Molecular evolution: No escape from the tangled bank. Nature. PMID 29045393 DOI: 10.1038/Nature24152 |
0.382 |
|
| 2017 |
Carja O, Plotkin JB. The evolutionary advantage of heritable phenotypic heterogeneity. Scientific Reports. 7: 5090. PMID 28698577 DOI: 10.1038/S41598-017-05214-2 |
0.34 |
|
| 2016 |
Stewart AJ, Parsons TL, Plotkin JB. Evolutionary consequences of behavioral diversity. Proceedings of the National Academy of Sciences of the United States of America. PMID 27791109 DOI: 10.1073/Pnas.1608990113 |
0.311 |
|
| 2016 |
Newberry MG, McCandlish DM, Plotkin JB. Assortative mating can impede or facilitate fixation of underdominant alleles. Theoretical Population Biology. PMID 27497738 DOI: 10.1016/J.Tpb.2016.07.003 |
0.363 |
|
| 2016 |
Nourmohammad A, Otwinowski J, Plotkin JB. Host-Pathogen Coevolution and the Emergence of Broadly Neutralizing Antibodies in Chronic Infections. Plos Genetics. 12: e1006171. PMID 27442127 DOI: 10.1371/Journal.Pgen.1006171 |
0.311 |
|
| 2016 |
McCandlish DM, Shah P, Plotkin JB. Epistasis and the Dynamics of Reversion in Molecular Evolution. Genetics. PMID 27194749 DOI: 10.1534/Genetics.116.188961 |
0.548 |
|
| 2016 |
McCandlish DM, Plotkin JB. Transcriptional errors and the drift barrier. Proceedings of the National Academy of Sciences of the United States of America. PMID 26966235 DOI: 10.1073/Pnas.1601785113 |
0.379 |
|
| 2016 |
Weinberg DE, Shah P, Eichhorn SW, Hussmann JA, Plotkin JB, Bartel DP. Improved Ribosome-Footprint and mRNA Measurements Provide Insights into Dynamics and Regulation of Yeast Translation. Cell Reports. PMID 26876183 DOI: 10.1016/J.Celrep.2016.01.043 |
0.505 |
|
| 2016 |
Gulisija D, Kim Y, Plotkin JB. Phenotypic Plasticity Promotes Balanced Polymorphism in Periodic Environments by a Genomic Storage Effect. Genetics. PMID 26857626 DOI: 10.1534/Genetics.115.185702 |
0.354 |
|
| 2015 |
Neverov AD, Kryazhimskiy S, Plotkin JB, Bazykin GA. Coordinated Evolution of Influenza A Surface Proteins. Plos Genetics. 11: e1005404. PMID 26247472 DOI: 10.1371/Journal.Pgen.1005404 |
0.78 |
|
| 2015 |
McCandlish DM, Otwinowski J, Plotkin JB. Detecting epistasis from an ensemble of adapting populations. Evolution; International Journal of Organic Evolution. PMID 26194030 DOI: 10.1111/Evo.12735 |
0.402 |
|
| 2015 |
Shah P, McCandlish DM, Plotkin JB. Contingency and entrenchment in protein evolution under purifying selection. Proceedings of the National Academy of Sciences of the United States of America. 112: E3226-35. PMID 26056312 DOI: 10.1073/Pnas.1412933112 |
0.596 |
|
| 2015 |
Schulte MB, Draghi JA, Plotkin JB, Andino R. Experimentally guided models reveal replication principles that shape the mutation distribution of RNA viruses. Elife. 4. PMID 25635405 DOI: 10.7554/Elife.03753 |
0.34 |
|
| 2015 |
McCandlish DM, Epstein CL, Plotkin JB. Formal properties of the probability of fixation: identities, inequalities and approximations. Theoretical Population Biology. 99: 98-113. PMID 25450112 DOI: 10.1016/J.Tpb.2014.11.004 |
0.375 |
|
| 2015 |
Stewart AJ, Plotkin JB. The evolvability of cooperation under local and non-local mutations Games. 6: 231-250. DOI: 10.3390/G6030231 |
0.379 |
|
| 2014 |
Stewart AJ, Plotkin JB. Collapse of cooperation in evolving games. Proceedings of the National Academy of Sciences of the United States of America. 111: 17558-63. PMID 25422421 DOI: 10.1073/Pnas.1408618111 |
0.344 |
|
| 2014 |
Otwinowski J, Plotkin JB. Inferring fitness landscapes by regression produces biased estimates of epistasis. Proceedings of the National Academy of Sciences of the United States of America. 111: E2301-9. PMID 24843135 DOI: 10.1073/Pnas.1400849111 |
0.382 |
|
| 2014 |
Der R, Plotkin JB. The equilibrium allele frequency distribution for a population with reproductive skew. Genetics. 196: 1199-216. PMID 24473932 DOI: 10.1534/Genetics.114.161422 |
0.366 |
|
| 2014 |
McCandlish DM, Epstein CL, Plotkin JB. The inevitability of unconditionally deleterious substitutions during adaptation. Evolution; International Journal of Organic Evolution. 68: 1351-64. PMID 24410330 DOI: 10.1111/Evo.12350 |
0.379 |
|
| 2014 |
Feder AF, Kryazhimskiy S, Plotkin JB. Identifying signatures of selection in genetic time series. Genetics. 196: 509-22. PMID 24318534 DOI: 10.1534/Genetics.113.158220 |
0.775 |
|
| 2013 |
Draghi JA, Plotkin JB. Selection biases the prevalence and type of epistasis along adaptive trajectories. Evolution; International Journal of Organic Evolution. 67: 3120-31. PMID 24151997 DOI: 10.1111/Evo.12192 |
0.409 |
|
| 2013 |
Stewart AJ, Plotkin JB. From extortion to generosity, evolution in the Iterated Prisoner's Dilemma. Proceedings of the National Academy of Sciences of the United States of America. 110: 15348-53. PMID 24003115 DOI: 10.1073/Pnas.1306246110 |
0.324 |
|
| 2013 |
Rajon E, Plotkin JB. The evolution of genetic architectures underlying quantitative traits. Proceedings. Biological Sciences / the Royal Society. 280: 20131552. PMID 23986107 DOI: 10.1098/Rspb.2013.1552 |
0.331 |
|
| 2013 |
Stewart AJ, Plotkin JB. The evolution of complex gene regulation by low-specificity binding sites. Proceedings. Biological Sciences / the Royal Society. 280: 20131313. PMID 23945682 DOI: 10.1098/Rspb.2013.1313 |
0.317 |
|
| 2013 |
Li Y, Bostick DL, Sullivan CB, Myers JL, Griesemer SB, Stgeorge K, Plotkin JB, Hensley SE. Single hemagglutinin mutations that alter both antigenicity and receptor binding avidity influence influenza virus antigenic clustering. Journal of Virology. 87: 9904-10. PMID 23824816 DOI: 10.1128/Jvi.01023-13 |
0.301 |
|
| 2013 |
Shah P, Ding Y, Niemczyk M, Kudla G, Plotkin JB. Rate-limiting steps in yeast protein translation. Cell. 153: 1589-601. PMID 23791185 DOI: 10.1016/J.Cell.2013.05.049 |
0.518 |
|
| 2013 |
McCandlish DM, Rajon E, Shah P, Ding Y, Plotkin JB. The role of epistasis in protein evolution. Nature. 497: E1-2; discussion E2-. PMID 23719465 DOI: 10.1038/Nature12219 |
0.552 |
|
| 2012 |
Ding Y, Shah P, Plotkin JB. Weak 5'-mRNA secondary structures in short eukaryotic genes. Genome Biology and Evolution. 4: 1046-53. PMID 23034215 DOI: 10.1093/Gbe/Evs082 |
0.503 |
|
| 2012 |
Stewart AJ, Seymour RM, Pomiankowski A, Plotkin JB. The population genetics of cooperative gene regulation. Bmc Evolutionary Biology. 12: 173. PMID 22954408 DOI: 10.1186/1471-2148-12-173 |
0.325 |
|
| 2012 |
Stewart AJ, Hannenhalli S, Plotkin JB. Why transcription factor binding sites are ten nucleotides long. Genetics. 192: 973-85. PMID 22887818 DOI: 10.1534/Genetics.112.143370 |
0.305 |
|
| 2012 |
Morlon H, Kemps BD, Plotkin JB, Brisson D. Explosive radiation of a bacterial species group. Evolution; International Journal of Organic Evolution. 66: 2577-86. PMID 22834754 DOI: 10.1111/J.1558-5646.2012.01598.X |
0.636 |
|
| 2012 |
Lipsitch M, Plotkin JB, Simonsen L, Bloom B. Evolution, safety, and highly pathogenic influenza viruses. Science (New York, N.Y.). 336: 1529-31. PMID 22723411 DOI: 10.1126/Science.1223204 |
0.347 |
|
| 2012 |
Toll-Riera M, Bostick D, Albà MM, Plotkin JB. Structure and age jointly influence rates of protein evolution. Plos Computational Biology. 8: e1002542. PMID 22693443 DOI: 10.1371/Journal.Pcbi.1002542 |
0.312 |
|
| 2012 |
Der R, Epstein C, Plotkin JB. Dynamics of neutral and selected alleles when the offspring distribution is skewed. Genetics. 191: 1331-44. PMID 22661323 DOI: 10.1534/Genetics.112.140038 |
0.377 |
|
| 2012 |
Stewart AJ, Parsons TL, Plotkin JB. Environmental robustness and the adaptability of populations. Evolution; International Journal of Organic Evolution. 66: 1598-612. PMID 22519793 DOI: 10.1111/J.1558-5646.2011.01526.X |
0.328 |
|
| 2012 |
Desai MM, Nicolaisen LE, Walczak AM, Plotkin JB. The structure of allelic diversity in the presence of purifying selection. Theoretical Population Biology. 81: 144-57. PMID 22198521 DOI: 10.1016/J.Tpb.2011.12.002 |
0.603 |
|
| 2012 |
Walczak AM, Nicolaisen LE, Plotkin JB, Desai MM. The structure of genealogies in the presence of purifying selection: a fitness-class coalescent. Genetics. 190: 753-79. PMID 22135349 DOI: 10.1534/Genetics.111.134544 |
0.599 |
|
| 2012 |
Draghi JA, Plotkin JB. A network of paths toward innovation Bioessays. DOI: 10.1002/Bies.201200016 |
0.387 |
|
| 2011 |
Morlon H, Parsons TL, Plotkin JB. Reconciling molecular phylogenies with the fossil record. Proceedings of the National Academy of Sciences of the United States of America. 108: 16327-32. PMID 21930899 DOI: 10.1073/Pnas.1102543108 |
0.646 |
|
| 2011 |
Der R, Epstein CL, Plotkin JB. Generalized population models and the nature of genetic drift. Theoretical Population Biology. 80: 80-99. PMID 21718713 DOI: 10.1016/J.Tpb.2011.06.004 |
0.36 |
|
| 2011 |
Draghi JA, Plotkin JB. Molecular evolution: Hidden diversity sparks adaptation. Nature. 474: 45-6. PMID 21637251 DOI: 10.1038/474045A |
0.389 |
|
| 2011 |
Kryazhimskiy S, Draghi JA, Plotkin JB. Evolution. In evolution, the sum is less than its parts. Science (New York, N.Y.). 332: 1160-1. PMID 21636764 DOI: 10.1126/Science.1208072 |
0.762 |
|
| 2011 |
Vishnoi A, Sethupathy P, Simola D, Plotkin JB, Hannenhalli S. Genome-wide survey of natural selection on functional, structural, and network properties of polymorphic sites in Saccharomyces paradoxus. Molecular Biology and Evolution. 28: 2615-27. PMID 21478372 DOI: 10.1093/Molbev/Msr085 |
0.413 |
|
| 2011 |
Kryazhimskiy S, Dushoff J, Bazykin GA, Plotkin JB. Prevalence of epistasis in the evolution of influenza A surface proteins. Plos Genetics. 7: e1001301. PMID 21390205 DOI: 10.1371/Journal.Pgen.1001301 |
0.777 |
|
| 2011 |
Plotkin JB. Cell biology. The lives of proteins. Science (New York, N.Y.). 331: 683-4. PMID 21310990 DOI: 10.1126/Science.1202010 |
0.32 |
|
| 2011 |
Draghi JA, Parsons TL, Plotkin JB. Epistasis increases the rate of conditionally neutral substitution in an adapting population. Genetics. 187: 1139-52. PMID 21288876 DOI: 10.1534/Genetics.110.125997 |
0.413 |
|
| 2011 |
Plotkin JB, Kudla G. Synonymous but not the same: the causes and consequences of codon bias. Nature Reviews. Genetics. 12: 32-42. PMID 21102527 DOI: 10.1038/Nrg2899 |
0.414 |
|
| 2010 |
Morlon H, Potts MD, Plotkin JB. Inferring the dynamics of diversification: a coalescent approach. Plos Biology. 8. PMID 20927410 DOI: 10.1371/Journal.Pbio.1000493 |
0.752 |
|
| 2010 |
Vishnoi A, Kryazhimskiy S, Bazykin GA, Hannenhalli S, Plotkin JB. Young proteins experience more variable selection pressures than old proteins. Genome Research. 20: 1574-81. PMID 20921233 DOI: 10.1101/Gr.109595.110 |
0.769 |
|
| 2010 |
Plotkin JB. Transcriptional regulation is only half the story. Molecular Systems Biology. 6: 406. PMID 20739928 DOI: 10.1038/Msb.2010.63 |
0.312 |
|
| 2010 |
Parsons TL, Quince C, Plotkin JB. Some consequences of demographic stochasticity in population genetics. Genetics. 185: 1345-54. PMID 20457879 DOI: 10.1534/Genetics.110.115030 |
0.353 |
|
| 2010 |
Draghi JA, Parsons TL, Wagner GP, Plotkin JB. Mutational robustness can facilitate adaptation. Nature. 463: 353-5. PMID 20090752 DOI: 10.1038/Nature08694 |
0.416 |
|
| 2009 |
Goldstein E, Dushoff J, Ma J, Plotkin JB, Earn DJ, Lipsitch M. Reconstructing influenza incidence by deconvolution of daily mortality time series. Proceedings of the National Academy of Sciences of the United States of America. 106: 21825-9. PMID 20080801 DOI: 10.1073/Pnas.0902958106 |
0.571 |
|
| 2009 |
Kryazhimskiy S, Tkacik G, Plotkin JB. The dynamics of adaptation on correlated fitness landscapes. Proceedings of the National Academy of Sciences of the United States of America. 106: 18638-43. PMID 19858497 DOI: 10.1073/Pnas.0905497106 |
0.784 |
|
| 2009 |
Ndifon W, Plotkin JB, Dushoff J. On the accessibility of adaptive phenotypes of a bacterial metabolic network. Plos Computational Biology. 5: e1000472. PMID 19696877 DOI: 10.1371/Journal.Pcbi.1000472 |
0.698 |
|
| 2009 |
Roy S, Vandenberghe LH, Kryazhimskiy S, Grant R, Calcedo R, Yuan X, Keough M, Sandhu A, Wang Q, Medina-Jaszek CA, Plotkin JB, Wilson JM. Isolation and characterization of adenoviruses persistently shed from the gastrointestinal tract of non-human primates. Plos Pathogens. 5: e1000503. PMID 19578438 DOI: 10.1371/Journal.Ppat.1000503 |
0.755 |
|
| 2009 |
Kudla G, Murray AW, Tollervey D, Plotkin JB. Coding-sequence determinants of gene expression in Escherichia coli. Science (New York, N.Y.). 324: 255-8. PMID 19359587 DOI: 10.1126/Science.1170160 |
0.316 |
|
| 2008 |
Kryazhimskiy S, Plotkin JB. The population genetics of dN/dS. Plos Genetics. 4: e1000304. PMID 19081788 DOI: 10.1371/Journal.Pgen.1000304 |
0.777 |
|
| 2008 |
Desai MM, Plotkin JB. The polymorphism frequency spectrum of finitely many sites under selection. Genetics. 180: 2175-91. PMID 18854590 DOI: 10.1534/Genetics.108.087361 |
0.599 |
|
| 2008 |
Parsons TL, Quince C, Plotkin JB. Absorption and fixation times for neutral and quasi-neutral populations with density dependence. Theoretical Population Biology. 74: 302-10. PMID 18835288 DOI: 10.1016/J.Tpb.2008.09.001 |
0.332 |
|
| 2008 |
Sethupathy P, Giang H, Plotkin JB, Hannenhalli S. Genome-wide analysis of natural selection on human cis-elements. Plos One. 3: e3137. PMID 18781197 DOI: 10.1371/Journal.Pone.0003137 |
0.349 |
|
| 2008 |
Kryazhimskiy S, Bazykin GA, Plotkin JB, Plotkin J, Dushoff J. Directionality in the evolution of influenza A haemagglutinin. Proceedings. Biological Sciences / the Royal Society. 275: 2455-64. PMID 18647721 DOI: 10.1098/Rspb.2008.0521 |
0.767 |
|
| 2008 |
Lucks JB, Nelson DR, Kudla GR, Plotkin JB. Genome landscapes and bacteriophage codon usage. Plos Computational Biology. 4: e1000001. PMID 18463708 DOI: 10.1371/Journal.Pcbi.1000001 |
0.369 |
|
| 2007 |
Fraser HB, Plotkin JB. Using protein complexes to predict phenotypic effects of gene mutation. Genome Biology. 8: R252. PMID 18042286 DOI: 10.1186/Gb-2007-8-11-R252 |
0.333 |
|
| 2007 |
Green JL, Plotkin JB. A statistical theory for sampling species abundances. Ecology Letters. 10: 1037-45. PMID 17803677 DOI: 10.1111/J.1461-0248.2007.01101.X |
0.504 |
|
| 2007 |
Plotkin JB, Fraser HB. Assessing the determinants of evolutionary rates in the presence of noise. Molecular Biology and Evolution. 24: 1113-21. PMID 17347158 DOI: 10.1093/Molbev/Msm044 |
0.34 |
|
| 2006 |
Plotkin JB, Dushoff J, Desai MM, Fraser HB. Codon usage and selection on proteins. Journal of Molecular Evolution. 63: 635-53. PMID 17043750 DOI: 10.1007/S00239-005-0233-X |
0.619 |
|
| 2006 |
Plotkin JB, Dushoff J, Desai MM, Fraser HB. Estimating selection pressures from limited comparative data. Molecular Biology and Evolution. 23: 1457-9. PMID 16754640 DOI: 10.1093/Molbev/Msl021 |
0.552 |
|
| 2006 |
Ng KKS, Lee SL, Saw LG, Plotkin JB, Koh CL. Spatial structure and genetic diversity of three tropical tree species with different habitat preferences within a natural forest Tree Genetics and Genomes. 2: 121-131. DOI: 10.1007/S11295-006-0035-3 |
0.311 |
|
| 2005 |
Lukhtanov VA, Kandul NP, Plotkin JB, Dantchenko AV, Haig D, Pierce NE. Reinforcement of pre-zygotic isolation and karyotype evolution in Agrodiaetus butterflies. Nature. 436: 385-9. PMID 16034417 DOI: 10.1038/Nature03704 |
0.359 |
|
| 2004 |
Dushoff J, Plotkin JB, Levin SA, Earn DJ. Dynamical resonance can account for seasonality of influenza epidemics. Proceedings of the National Academy of Sciences of the United States of America. 101: 16915-6. PMID 15557003 DOI: 10.1073/Pnas.0407293101 |
0.571 |
|
| 2004 |
Plotkin JB, Robins H, Levine AJ. Tissue-specific codon usage and the expression of human genes. Proceedings of the National Academy of Sciences of the United States of America. 101: 12588-91. PMID 15314228 DOI: 10.1073/Pnas.0404957101 |
0.308 |
|
| 2004 |
Plotkin JB, Dushoff J, Fraser HB. Detecting selection using a single genome sequence of M. tuberculosis and P. falciparum. Nature. 428: 942-5. PMID 15118727 DOI: 10.1038/Nature02458 |
0.348 |
|
| 2004 |
Levin SA, Dushoff J, Plotkin JB. Evolution and persistence of influenza A and other diseases. Mathematical Biosciences. 188: 17-28. PMID 14766091 DOI: 10.1016/J.Mbs.2003.08.010 |
0.614 |
|
| 2003 |
Plotkin JB, Dushoff J. Codon bias and frequency-dependent selection on the hemagglutinin epitopes of influenza A virus. Proceedings of the National Academy of Sciences of the United States of America. 100: 7152-7. PMID 12748378 DOI: 10.1073/Pnas.1132114100 |
0.406 |
|
| 2002 |
Plotkin JB, Dushoff J, Levin SA. Hemagglutinin sequence clusters and the antigenic evolution of influenza A virus. Proceedings of the National Academy of Sciences of the United States of America. 99: 6263-8. PMID 11972025 DOI: 10.1073/Pnas.082110799 |
0.604 |
|
| 2002 |
Krakauer DC, Plotkin JB. Redundancy, antiredundancy, and the robustness of genomes. Proceedings of the National Academy of Sciences of the United States of America. 99: 1405-9. PMID 11818563 DOI: 10.1073/Pnas.032668599 |
0.37 |
|
| 2002 |
Plotkin JB, Muller-Landau HC. Sampling the species composition of a landscape Ecology. 83: 3344-3356. DOI: 10.1890/0012-9658(2002)083[3344:Stscoa]2.0.Co;2 |
0.597 |
|
| 2002 |
Potts MD, Ashton PS, Kaufman LS, Plotkin JB. Habitat patterns in tropical rain forests: A comparison of 105 plots in northwest Borneo Ecology. 83: 2782-2797. DOI: 10.1890/0012-9658(2002)083[2782:Hpitrf]2.0.Co;2 |
0.621 |
|
| 2000 |
Plotkin JB, Potts MD, Leslie N, Manokaran N, Lafrankie J, Ashton PS. Species-area curves, spatial aggregation, and habitat specialization in tropical forests. Journal of Theoretical Biology. 207: 81-99. PMID 11027481 DOI: 10.1006/Jtbi.2000.2158 |
0.615 |
|
| 2000 |
Plotkin JB, Potts MD, Yu DW, Bunyavejchewin S, Condit R, Foster R, Hubbell S, LaFrankie J, Manokaran N, Seng LH, Sukumar R, Nowak MA, Ashton PS. Predicting species diversity in tropical forests. Proceedings of the National Academy of Sciences of the United States of America. 97: 10850-4. PMID 11005859 DOI: 10.1073/Pnas.97.20.10850 |
0.616 |
|
| Low-probability matches (unlikely to be authored by this person) |
| 2008 |
Chen-Plotkin AS, Geser F, Plotkin JB, Clark CM, Kwong LK, Yuan W, Grossman M, Van Deerlin VM, Trojanowski JQ, Lee VM. Variations in the progranulin gene affect global gene expression in frontotemporal lobar degeneration. Human Molecular Genetics. 17: 1349-62. PMID 18223198 DOI: 10.1093/Hmg/Ddn023 |
0.29 |
|
| 2013 |
Harrison RD, Tan S, Plotkin JB, Slik F, Detto M, Brenes T, Itoh A, Davies SJ. Consequences of defaunation for a tropical tree community. Ecology Letters. 16: 687-94. PMID 23489437 DOI: 10.1111/Ele.12102 |
0.287 |
|
| 2014 |
Schulte MB, Draghi JA, Plotkin JB, Andino R. Author response: Experimentally guided models reveal replication principles that shape the mutation distribution of RNA viruses Elife. DOI: 10.7554/Elife.03753.019 |
0.285 |
|
| 2012 |
Stewart AJ, Plotkin JB. Extortion and cooperation in the Prisoner's Dilemma. Proceedings of the National Academy of Sciences of the United States of America. 109: 10134-5. PMID 22711812 DOI: 10.1073/Pnas.1208087109 |
0.285 |
|
| 2013 |
Li Y, Myers JL, Bostick DL, Sullivan CB, Madara J, Linderman SL, Liu Q, Carter DM, Wrammert J, Esposito S, Principi N, Plotkin JB, Ross TM, Ahmed R, Wilson PC, et al. Immune history shapes specificity of pandemic H1N1 influenza antibody responses. The Journal of Experimental Medicine. 210: 1493-500. PMID 23857983 DOI: 10.1084/Jem.20130212 |
0.283 |
|
| 2001 |
Plotkin JB, Nowak MA. Major transitions in language evolution Entropy. 3: 227-246. DOI: 10.3390/E3040227 |
0.283 |
|
| 2000 |
Nowak MA, Plotkin JB, Jansen VA. The evolution of syntactic communication. Nature. 404: 495-8. PMID 10761917 DOI: 10.1038/35006635 |
0.28 |
|
| 2006 |
Seidler TG, Plotkin JB. Seed dispersal and spatial pattern in tropical trees. Plos Biology. 4: e344. PMID 17048988 DOI: 10.1371/Journal.Pbio.0040344 |
0.28 |
|
| 2015 |
Kumar MS, Plotkin JB, Hannenhalli S. Regulated CRISPR Modules Exploit a Dual Defense Strategy of Restriction and Abortive Infection in a Model of Prokaryote-Phage Coevolution. Plos Computational Biology. 11: e1004603. PMID 26544847 DOI: 10.1371/Journal.Pcbi.1004603 |
0.278 |
|
| 2002 |
Plotkin JB, Chave J, Ashton PS. Cluster analysis of spatial patterns in Malaysian tree species. The American Naturalist. 160: 629-44. PMID 18707513 DOI: 10.1086/342823 |
0.278 |
|
| 2011 |
Toole JL, Eagle N, Plotkin JB. Spatiotemporal correlations in criminal offense records Acm Transactions On Intelligent Systems and Technology. 2. DOI: 10.1145/1989734.1989742 |
0.277 |
|
| 2006 |
Dushoff J, Plotkin JB, Viboud C, Earn DJ, Simonsen L. Mortality due to influenza in the United States--an annualized regression approach using multiple-cause mortality data. American Journal of Epidemiology. 163: 181-7. PMID 16319291 DOI: 10.1093/Aje/Kwj024 |
0.268 |
|
| 2007 |
Dushoff J, Plotkin JB, Viboud C, Simonsen L, Miller M, Loeb M, Earn DJ. Vaccinating to protect a vulnerable subpopulation. Plos Medicine. 4: e174. PMID 17518515 DOI: 10.1371/Journal.Pmed.0040174 |
0.266 |
|
| 2019 |
Radzvilavicius AL, Stewart AJ, Plotkin JB. Evolution of empathetic moral evaluation. Elife. 8. PMID 30964002 DOI: 10.7554/Elife.44269 |
0.265 |
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| 2005 |
Fraser HB, Khaitovich P, Plotkin JB, Pääbo S, Eisen MB. Aging and gene expression in the primate brain. Plos Biology. 3: e274. PMID 16048372 DOI: 10.1371/Journal.Pbio.0030274 |
0.26 |
|
| 2010 |
Levy MZ, Malaga Chavez FS, Cornejo Del Carpio JG, Vilhena DA, McKenzie FE, Plotkin JB. Rational spatio-temporal strategies for controlling a Chagas disease vector in urban environments. Journal of the Royal Society, Interface / the Royal Society. 7: 1061-70. PMID 20061346 DOI: 10.1098/Rsif.2009.0479 |
0.255 |
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| 2022 |
Princepe D, de Aguiar MAM, Plotkin JB. Mito-nuclear selection induces a trade-off between species ecological dominance and evolutionary lifespan. Nature Ecology & Evolution. PMID 36216905 DOI: 10.1038/s41559-022-01901-0 |
0.254 |
|
| 2016 |
Stewart AJ, Plotkin JB. Small groups and long memories promote cooperation. Scientific Reports. 6: 26889. PMID 27247059 DOI: 10.1038/Srep26889 |
0.248 |
|
| 2010 |
Cao K, Chen-Plotkin AS, Plotkin JB, Wang LS. Age-correlated gene expression in normal and neurodegenerative human brain tissues. Plos One. 5. PMID 20927326 DOI: 10.1371/Journal.Pone.0013098 |
0.247 |
|
| 2002 |
Plotkin JB, Nowak MA. The different effects of apoptosis and DNA repair on tumorigenesis. Journal of Theoretical Biology. 214: 453-67. PMID 11846602 DOI: 10.1006/Jtbi.2001.2471 |
0.245 |
|
| 2011 |
Levy MZ, Small DS, Vilhena DA, Bowman NM, Kawai V, Cornejo del Carpio JG, Cordova-Benzaquen E, Gilman RH, Bern C, Plotkin JB. Retracing micro-epidemics of Chagas disease using epicenter regression. Plos Computational Biology. 7: e1002146. PMID 21935346 DOI: 10.1371/Journal.Pcbi.1002146 |
0.243 |
|
| 2005 |
Plotkin JB, Dushoff J, Fraser HB. Codon volatility does not detect selection (reply) Nature. 433: E7-E8. DOI: 10.1038/Nature03224 |
0.242 |
|
| 2000 |
Plotkin JB, Nowak MA. Language evolution and information theory. Journal of Theoretical Biology. 205: 147-59. PMID 10860707 DOI: 10.1006/Jtbi.2000.2053 |
0.241 |
|
| 2023 |
Wang G, Su Q, Wang L, Plotkin JB. Reproductive variance can drive behavioral dynamics. Proceedings of the National Academy of Sciences of the United States of America. 120: e2216218120. PMID 36927152 DOI: 10.1073/pnas.2216218120 |
0.24 |
|
| 2008 |
Wu M, Li J, Engleka KA, Zhou B, Lu MM, Plotkin JB, Epstein JA. Persistent expression of Pax3 in the neural crest causes cleft palate and defective osteogenesis in mice. The Journal of Clinical Investigation. 118: 2076-87. PMID 18483623 DOI: 10.1172/Jci33715 |
0.233 |
|
| 2010 |
Salguero-Gómez R, Plotkin JB. Matrix dimensions bias demographic inferences: implications for comparative plant demography. The American Naturalist. 176: 710-22. PMID 20964622 DOI: 10.1086/657044 |
0.232 |
|
| 2019 |
Stewart AJ, Mosleh M, Diakonova M, Arechar AA, Rand DG, Plotkin JB. Information gerrymandering and undemocratic decisions. Nature. 573: 117-121. PMID 31485058 DOI: 10.1038/S41586-019-1507-6 |
0.228 |
|
| 2009 |
Levy MZ, Bowman NM, Kawai V, Plotkin JB, Waller LA, Cabrera L, Steurer F, Seitz AE, Pinedo-Cancino VV, Cornejo del Carpio JG, Cordova Benzaquen E, McKenzie FE, Maguire JH, Gilman RH, Bern C. Spatial patterns in discordant diagnostic test results for Chagas disease: links to transmission hotspots. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 48: 1104-6. PMID 19278335 DOI: 10.1086/597464 |
0.228 |
|
| 2019 |
Radzvilavicius AL, Stewart AJ, Plotkin JB. Author response: Evolution of empathetic moral evaluation Elife. DOI: 10.7554/Elife.44269.015 |
0.223 |
|
| 1999 |
Nowak MA, Plotkin JB, Krakauer DC. The evolutionary language game. Journal of Theoretical Biology. 200: 147-62. PMID 10504282 DOI: 10.1006/Jtbi.1999.0981 |
0.215 |
|
| 2020 |
Jones JM, Foster W, Twomey C, Burdge J, Ahmed O, Pereira TD, Wojick JA, Corder G, Plotkin JB, Abdus-Saboor I. A machine-vision approach for automated pain measurement at millisecond timescales. Elife. 9. PMID 32758355 DOI: 10.7554/Elife.57258 |
0.202 |
|
| 2008 |
Wu M, Li J, Engleka KA, Zhou B, Lu M, Plotkin J, Epstein JA. Persistent expression of Pax3 in neural crest causes cleft palate and defective osteogenesis Developmental Biology. 319: 500-501. DOI: 10.1016/J.Ydbio.2008.05.120 |
0.193 |
|
| 2024 |
Stewart AJ, Arechar AA, Rand DG, Plotkin JB. The distorting effects of producer strategies: Why engagement does not reveal consumer preferences for misinformation. Proceedings of the National Academy of Sciences of the United States of America. 121: e2315195121. PMID 38412133 DOI: 10.1073/pnas.2315195121 |
0.192 |
|
| 2019 |
Plotkin JB. Ancel (2000) on the Baldwin effect. Theoretical Population Biology. PMID 31562843 DOI: 10.1016/J.Tpb.2019.09.003 |
0.19 |
|
| 2020 |
Jones JM, Foster W, Twomey CR, Burdge J, Ahmed OM, Pereira TD, Wojick JA, Corder G, Plotkin JB, Abdus-Saboor I. Author response: A machine-vision approach for automated pain measurement at millisecond timescales Elife. DOI: 10.7554/Elife.57258.Sa2 |
0.184 |
|
| 2021 |
Hirshleifer D, Plotkin JB. Moonshots, investment booms, and selection bias in the transmission of cultural traits. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34172573 DOI: 10.1073/pnas.2015571118 |
0.176 |
|
| 2021 |
Stewart AJ, Plotkin JB. The natural selection of good science. Nature Human Behaviour. PMID 34002054 DOI: 10.1038/s41562-021-01111-x |
0.176 |
|
| 2022 |
Newberry MG, Plotkin JB. Measuring frequency-dependent selection in culture. Nature Human Behaviour. PMID 35637298 DOI: 10.1038/s41562-022-01342-6 |
0.17 |
|
| 2023 |
Sheng A, Su Q, Li A, Wang L, Plotkin JB. Constructing temporal networks with bursty activity patterns. Nature Communications. 14: 7311. PMID 37951967 DOI: 10.1038/s41467-023-42868-1 |
0.16 |
|
| 2024 |
Kawakatsu M, Michel-Mata S, Kessinger TA, Tarnita CE, Plotkin JB. When do stereotypes undermine indirect reciprocity? Plos Computational Biology. 20: e1011862. PMID 38427626 DOI: 10.1371/journal.pcbi.1011862 |
0.154 |
|
| 2015 |
Mccandlish DM, Otwinowski J, Plotkin JB. Detecting epistasis from an ensemble of adapting populations Evolution. DOI: 10.1111/evo.12735 |
0.15 |
|
| 2023 |
Su Q, McAvoy A, Plotkin JB. Strategy evolution on dynamic networks. Nature Computational Science. 3: 763-776. PMID 38177777 DOI: 10.1038/s43588-023-00509-z |
0.139 |
|
| 2022 |
Su Q, Allen B, Plotkin JB. Evolution of cooperation with asymmetric social interactions. Proceedings of the National Academy of Sciences of the United States of America. 119. PMID 34983850 DOI: 10.1073/pnas.2113468118 |
0.133 |
|
| 2024 |
Sheng A, Su Q, Wang L, Plotkin JB. Strategy evolution on higher-order networks. Nature Computational Science. PMID 38622347 DOI: 10.1038/s43588-024-00621-8 |
0.12 |
|
| 2024 |
Chiba-Okabe H, Plotkin JB. Can institutions foster cooperation by wealth redistribution? Journal of the Royal Society, Interface. 21: 20230698. PMID 38471530 DOI: 10.1098/rsif.2023.0698 |
0.12 |
|
| 2022 |
Ventura R, Plotkin JB, Roberts G. Drift as a Driver of Language Change: An Artificial Language Experiment. Cognitive Science. 46: e13197. PMID 36083286 DOI: 10.1111/cogs.13197 |
0.12 |
|
| 2009 |
Kryazhimskiy S, Bazykin GA, Plotkin JB, Dushoff J. Directionality in the evolution of influenza A haemagglutinin (Proceedings of the Royal Society B: Biological Sciences (2008) 275, (2455-2464) 10.1098/rspb.2008.0521) Proceedings of the Royal Society B: Biological Sciences. 276: 3035. DOI: 10.1098/rspb.2009.0830 |
0.118 |
|
| 2023 |
Kessinger TA, Tarnita CE, Plotkin JB. Evolution of norms for judging social behavior. Proceedings of the National Academy of Sciences of the United States of America. 120: e2219480120. PMID 37276388 DOI: 10.1073/pnas.2219480120 |
0.116 |
|
| 2022 |
Su Q, McAvoy A, Plotkin JB. Evolution of cooperation with contextualized behavior. Science Advances. 8: eabm6066. PMID 35138905 DOI: 10.1126/sciadv.abm6066 |
0.113 |
|
| 2022 |
Su Q, McAvoy A, Mori Y, Plotkin JB. Evolution of prosocial behaviours in multilayer populations. Nature Human Behaviour. PMID 34980900 DOI: 10.1038/s41562-021-01241-2 |
0.101 |
|
| 2024 |
Twomey CR, Brainard DH, Plotkin JB. History constrains the evolution of efficient color naming, enabling historical inference. Proceedings of the National Academy of Sciences of the United States of America. 121: e2313603121. PMID 38416682 DOI: 10.1073/pnas.2313603121 |
0.099 |
|
| 2021 |
Radzvilavicius AL, Kessinger TA, Plotkin JB. Adherence to public institutions that foster cooperation. Nature Communications. 12: 3567. PMID 34117236 DOI: 10.1038/s41467-021-23783-9 |
0.087 |
|
| 2009 |
Surmeier DJ, Plotkin J, Shen W. Dopamine and synaptic plasticity in dorsal striatal circuits controlling action selection. Current Opinion in Neurobiology. 19: 621-8. PMID 19896832 DOI: 10.1016/J.Conb.2009.10.003 |
0.085 |
|
| 2021 |
Stewart AJ, Plotkin JB, McCarty N. Inequality, identity, and partisanship: How redistribution can stem the tide of mass polarization. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34876507 DOI: 10.1073/pnas.2102140118 |
0.084 |
|
| 2022 |
Kim H, Mori Y, Plotkin JB. Optimality of intercellular signaling: Direct transport versus diffusion. Physical Review. E. 106: 054411. PMID 36559352 DOI: 10.1103/PhysRevE.106.054411 |
0.06 |
|
| 2021 |
Twomey CR, Roberts G, Brainard DH, Plotkin JB. What we talk about when we talk about colors. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34556580 DOI: 10.1073/pnas.2109237118 |
0.059 |
|
| 2010 |
Toole J, Eagle N, Plotkin J. Quantifying behavioral data sets of criminal activity Aaai Spring Symposium - Technical Report. 91-96. |
0.045 |
|
| 2021 |
Radzvilavicius AL, Kessinger TA, Plotkin JB. Author Correction: Adherence to public institutions that foster cooperation. Nature Communications. 12: 4537. PMID 34290241 DOI: 10.1038/s41467-021-24338-8 |
0.026 |
|
| 2014 |
Plotkin JB, Siegel RJ, Beigel R. Plaque disruption during transcatheter aortic valve replacement. European Heart Journal Cardiovascular Imaging. 15: 117. PMID 23970763 DOI: 10.1093/ehjci/jet151 |
0.01 |
|
| 2014 |
Dela Cruz SG, Plotkin JB, Esmailian F, Beigel R, Siegel RJ. Misdiagnosis by transoesophageal echo of post-operative cardiac thrombus and tamponade due to Surgicel® Fibrillar. European Heart Journal Cardiovascular Imaging. 15: 114. PMID 23913333 DOI: 10.1093/ehjci/jet126 |
0.01 |
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