| Year |
Citation |
Score |
| 2024 |
Yin J, He M, Liu XX, Ren CB, Liu HH, Luo H, Chen G, Wang ZF, Debnath SC, Wang PM, Chen HX, Zheng DQ. Peteryoungia algae sp. nov. isolated from seaweeds of Gouqi Island, China, and its unique genetic features among Peteryoungia strains. Antonie Van Leeuwenhoek. 117: 112. PMID 39133351 DOI: 10.1007/s10482-024-02010-7 |
0.419 |
|
| 2024 |
He M, Chen G, Li KJ, Tang XX, Liu XX, Ren CB, Liu HH, Luo H, Debnath SC, Wang PM, Chen HX, Zheng DQ. Characterization and Genomic Analysis of Affinirhizobium gouqiense sp. nov. Isolated from Seawater of Gouqi Island Located in the East China Sea and Reclassification of Rhizobium lemnae to the Genus Affinirhizobium as Affinirhizobium lemnae comb. nov. Current Microbiology. 81: 283. PMID 39066927 DOI: 10.1007/s00284-024-03807-5 |
0.42 |
|
| 2023 |
Zhu Y-X, He M, Li K-J, Wang Y-K, Qian N, Wang Z-F, Sheng H, Sui Y, Zhang D-D, Zhang K, Qi L, Zheng D-Q. Novel insights into the effects of 5-hydroxymethfurural on genomic instability and phenotypic evolution using a yeast model. Applied and Environmental Microbiology. e0164923. PMID 38108644 DOI: 10.1128/aem.01649-23 |
0.395 |
|
| 2023 |
Kozmin SG, Dominska M, Zheng DQ, Petes TD. Splitting the yeast centromere by recombination. Nucleic Acids Research. PMID 37994724 DOI: 10.1093/nar/gkad1110 |
0.601 |
|
| 2023 |
Chen G, He M, Li KJ, Zheng KW, Tang XX, Debnath SC, Wang PM, Guo Z, Hong Y, Zheng DQ. sp. nov., isolated from sediment of Zhairuo Island located in the East China Sea. International Journal of Systematic and Evolutionary Microbiology. 73. PMID 37589186 DOI: 10.1099/ijsem.0.006000 |
0.309 |
|
| 2023 |
Qi L, Zhu YX, Wang YK, Tang XX, Li KJ, He M, Sui Y, Wang PM, Zheng DQ, Zhang K. Nonlethal Furfural Exposure Causes Genomic Alterations and Adaptability Evolution in Saccharomyces cerevisiae. Microbiology Spectrum. e0121623. PMID 37395645 DOI: 10.1128/spectrum.01216-23 |
0.428 |
|
| 2023 |
Qi L, Sui Y, Tang XX, McGinty RJ, Liang XZ, Dominska M, Zhang K, Mirkin SM, Zheng DQ, Petes TD. Shuffling the yeast genome using CRISPR/Cas9-generated DSBs that target the transposable Ty1 elements. Plos Genetics. 19: e1010590. PMID 36701275 DOI: 10.1371/journal.pgen.1010590 |
0.641 |
|
| 2022 |
Sui Y, Epstein A, Dominska M, Zheng DQ, Petes TD, Klein HL. Ribodysgenesis: sudden genome instability in the yeast Saccharomyces cerevisiae arising from RNase H2 cleavage at genomic-embedded ribonucleotides. Nucleic Acids Research. PMID 35748861 DOI: 10.1093/nar/gkac536 |
0.625 |
|
| 2022 |
Zhang K, Sui Y, Li WL, Chen G, Wu XC, Kokoska RJ, Petes TD, Zheng DQ. Global genomic instability caused by reduced expression of DNA polymerase ε in yeast. Proceedings of the National Academy of Sciences of the United States of America. 119: e2119588119. PMID 35290114 DOI: 10.1073/pnas.2119588119 |
0.65 |
|
| 2021 |
Zheng DQ, Wang YT, Zhu YX, Sheng H, Li KJ, Sui Y, Zhang K. Uncovering bleomycin-induced genomic alterations and underlying mechanisms in yeast. Applied and Environmental Microbiology. AEM0170321. PMID 34731050 DOI: 10.1128/AEM.01703-21 |
0.427 |
|
| 2021 |
Tang XX, Wen XP, Qi L, Sui Y, Zhu YX, Zheng DQ. Origin, Regulation, and Fitness Effect of Chromosomal Rearrangements in the Yeast . International Journal of Molecular Sciences. 22. PMID 33466757 DOI: 10.3390/ijms22020786 |
0.405 |
|
| 2020 |
Sui Y, Qi L, Wu JK, Wen XP, Tang XX, Ma ZJ, Wu XC, Zhang K, Kokoska RJ, Zheng DQ, Petes TD. Genome-wide mapping of spontaneous genetic alterations in diploid yeast cells. Proceedings of the National Academy of Sciences of the United States of America. PMID 33106417 DOI: 10.1073/pnas.2018633117 |
0.606 |
|
| 2020 |
Shen L, Wang YT, Tang XX, Zhang K, Wang PM, Sui Y, Zheng DQ. Heat shock drives genomic instability and phenotypic variations in yeast. Amb Express. 10: 146. PMID 32804300 DOI: 10.1186/S13568-020-01091-7 |
0.401 |
|
| 2020 |
Khan I, Debnath SC, Yan C, Chen C, Xu Y, Wang WJ, Yu YC, Zheng DQ, Xu JZ, Wang PM. Flavobacterium ajazii sp. nov., Isolated from Seaweed of Gouqi Island, China. Current Microbiology. PMID 32661679 DOI: 10.1007/S00284-020-02112-1 |
0.455 |
|
| 2020 |
Debnath SC, Chen C, Khan I, Wang WJ, Zheng DQ, Xu JZ, Wang PM. sp. nov., isolated from surface water of a hypersaline lake, and descriptions of subsp. subsp. nov. and subsp. subsp. nov. International Journal of Systematic and Evolutionary Microbiology. PMID 32568031 DOI: 10.1099/Ijsem.0.004281 |
0.414 |
|
| 2020 |
Sui Y, Qi L, Zhang K, Saini N, Klimczak LJ, Sakofsky CJ, Gordenin DA, Petes TD, Zheng DQ. Analysis of APOBEC-induced mutations in yeast strains with low levels of replicative DNA polymerases. Proceedings of the National Academy of Sciences of the United States of America. PMID 32277034 DOI: 10.1073/Pnas.1922472117 |
0.619 |
|
| 2019 |
Debnath SC, Miyah AMA, Chen C, Sheng H, Xu XW, Wu YH, Zheng DQ, Xu JZ, Di YN, Wang PM, Shen L. Flavobacterium zhairuonensis sp. nov., a gliding bacterium isolated from marine sediment of the East China Sea. Journal of Microbiology (Seoul, Korea). PMID 31562606 DOI: 10.1007/S12275-019-9194-4 |
0.366 |
|
| 2019 |
Qi L, Zhang K, Wang YT, Wu JK, Sui Y, Liang XZ, Yu LZ, Wu XC, Wang PM, Xu JZ, Zheng DQ. Global analysis of furfural-induced genomic instability using a yeast model. Applied and Environmental Microbiology. PMID 31300396 DOI: 10.1128/Aem.01237-19 |
0.536 |
|
| 2019 |
Sheng H, Qi L, Sui Y, Li YZ, Yu LZ, Zhang K, Xu JZ, Wang PM, Zheng DQ. Mapping chromosomal instability induced by small-molecular therapeutics in a yeast model. Applied Microbiology and Biotechnology. PMID 31053912 DOI: 10.1007/S00253-019-09845-5 |
0.485 |
|
| 2019 |
Qi L, Wu XC, Zheng DQ. Hydrogen peroxide, a potent inducer of global genomic instability. Current Genetics. PMID 30963245 DOI: 10.1007/S00294-019-00969-9 |
0.551 |
|
| 2019 |
Zhang K, Zheng DQ, Sui Y, Qi L, Petes TD. Genome-wide analysis of genomic alterations induced by oxidative DNA damage in yeast. Nucleic Acids Research. PMID 30668788 DOI: 10.1093/Nar/Gkz027 |
0.655 |
|
| 2019 |
Debnath SC, Chen C, Liu SX, Di YN, Zheng DQ, Li XY, Xu XW, Xu JZ, Wang PM. Flavobacterium sharifuzzamanii sp. nov., Isolated from the Sediments of the East China Sea. Current Microbiology. PMID 30603961 DOI: 10.1007/S00284-018-1609-7 |
0.443 |
|
| 2018 |
Zheng DQ, Petes TD. Genome Instability Induced by Low Levels of Replicative DNA Polymerases in Yeast. Genes. 9. PMID 30405078 DOI: 10.3390/Genes9110539 |
0.674 |
|
| 2018 |
Zhang K, Di YN, Qi L, Sui Y, Wang TY, Fan L, Lv ZM, Wu XC, Wang PM, Zheng DQ. Genetic characterization and modification of a bioethanol-producing yeast strain. Applied Microbiology and Biotechnology. PMID 29333587 DOI: 10.1007/S00253-017-8727-1 |
0.52 |
|
| 2017 |
Zhang K, Wu XC, Zheng DQ, Petes TD. Effects of Temperature on the Meiotic Recombination Landscape of the Yeast Saccharomyces cerevisiae. Mbio. 8. PMID 29259092 DOI: 10.1128/Mbio.02099-17 |
0.586 |
|
| 2017 |
Zhang K, Fang YH, Gao KH, Sui Y, Zheng DQ, Wu XC. Effects of genome duplication on phenotypes and industrial applications of Saccharomyces cerevisiae strains. Applied Microbiology and Biotechnology. PMID 28429058 DOI: 10.1007/S00253-017-8284-7 |
0.479 |
|
| 2017 |
Zheng DQ, Jin XN, Zhang K, Fang YH, Wu XC. Novel strategy to improve vanillin tolerance and ethanol fermentation performances of Saccharomycere cerevisiae strains. Bioresource Technology. 231: 53-58. PMID 28192726 DOI: 10.1016/J.Biortech.2017.01.040 |
0.492 |
|
| 2016 |
Zheng DQ, Zhang K, Wu XC, Mieczkowski PA, Petes TD. Global analysis of genomic instability caused by DNA replication stress in Saccharomyces cerevisiae. Proceedings of the National Academy of Sciences of the United States of America. PMID 27911848 DOI: 10.1073/Pnas.1618129113 |
0.685 |
|
| 2016 |
Li X, Xu JZ, Wang WJ, Chen YW, Zheng DQ, Di YN, Li P, Wang PM, Li YD. Genome Sequencing and Evolutionary Analysis of Marine Gut Fungus Aspergillus sp. Z5 from Ligia oceanica. Evolutionary Bioinformatics Online. 12: 1-4. PMID 27081303 DOI: 10.4137/Ebo.S37532 |
0.477 |
|
| 2016 |
Wu X, Zhang L, Jin X, Fang Y, Zhang K, Qi L, Zheng D. Deletion of JJJ1 improves acetic acid tolerance and bioethanol fermentation performance of Saccharomyces cerevisiae strains. Biotechnology Letters. PMID 27067354 DOI: 10.1007/S10529-016-2085-4 |
0.354 |
|
| 2016 |
Zhang K, Zhang LJ, Fang YH, Jin XN, Qi L, Wu XC, Zheng DQ. Genomic structural variation contributes to phenotypic change of industrial bioethanol yeast Saccharomyces cerevisiae. Fems Yeast Research. PMID 26733503 DOI: 10.1093/Femsyr/Fov118 |
0.573 |
|
| 2015 |
Li O, Qian CD, Zheng DQ, Wang PM, Liu Y, Jiang XH, Wu XC. Two UDP-glucuronic acid decarboxylases involved in the biosynthesis of a bacterial exopolysaccharide in Paenibacillus elgii. Applied Microbiology and Biotechnology. 99: 3127-39. PMID 25573472 DOI: 10.1007/S00253-014-6362-7 |
0.404 |
|
| 2015 |
Zhang K, Tong M, Gao K, Di Y, Wang P, Zhang C, Wu X, Zheng D. Genomic reconstruction to improve bioethanol and ergosterol production of industrial yeast Saccharomyces cerevisiae. Journal of Industrial Microbiology & Biotechnology. 42: 207-18. PMID 25475753 DOI: 10.1007/S10295-014-1556-7 |
0.478 |
|
| 2014 |
Li Y, Zhang W, Zheng D, Zhou Z, Yu W, Zhang L, Feng L, Liang X, Guan W, Zhou J, Chen J, Lin Z. Genomic evolution of Saccharomyces cerevisiae under Chinese rice wine fermentation. Genome Biology and Evolution. 6: 2516-26. PMID 25212861 DOI: 10.1093/Gbe/Evu201 |
0.518 |
|
| 2014 |
Li O, Liu A, Lu C, Zheng DQ, Qian CD, Wang PM, Jiang XH, Wu XC. Increasing viscosity and yields of bacterial exopolysaccharides by repeatedly exposing strains to ampicillin. Carbohydrate Polymers. 110: 203-8. PMID 24906747 DOI: 10.1016/J.Carbpol.2014.03.069 |
0.406 |
|
| 2014 |
Zheng DQ, Chen J, Zhang K, Gao KH, Li O, Wang PM, Zhang XY, Du FG, Sun PY, Qu AM, Wu S, Wu XC. Genomic structural variations contribute to trait improvement during whole-genome shuffling of yeast. Applied Microbiology and Biotechnology. 98: 3059-70. PMID 24346281 DOI: 10.1007/S00253-013-5423-7 |
0.54 |
|
| 2014 |
Wang PM, Zheng DQ, Chi XQ, Li O, Qian CD, Liu TZ, Zhang XY, Du FG, Sun PY, Qu AM, Wu XC. Relationship of trehalose accumulation with ethanol fermentation in industrial Saccharomyces cerevisiae yeast strains. Bioresource Technology. 152: 371-6. PMID 24316480 DOI: 10.1016/J.Biortech.2013.11.033 |
0.411 |
|
| 2013 |
Zheng D, Zhang K, Gao K, Liu Z, Zhang X, Li O, Sun J, Zhang X, Du F, Sun P, Qu A, Wu X. Construction of novel Saccharomyces cerevisiae strains for bioethanol active dry yeast (ADY) production. Plos One. 8: e85022. PMID 24376860 DOI: 10.1371/Journal.Pone.0085022 |
0.42 |
|
| 2013 |
Zheng DQ, Liu TZ, Chen J, Zhang K, Li O, Zhu L, Zhao YH, Wu XC, Wang PM. Comparative functional genomics to reveal the molecular basis of phenotypic diversities and guide the genetic breeding of industrial yeast strains. Applied Microbiology and Biotechnology. 97: 2067-76. PMID 23344998 DOI: 10.1007/S00253-013-4698-Z |
0.487 |
|
| 2012 |
Zheng DQ, Wang PM, Chen J, Zhang K, Liu TZ, Wu XC, Li YD, Zhao YH. Genome sequencing and genetic breeding of a bioethanol Saccharomyces cerevisiae strain YJS329. Bmc Genomics. 13: 479. PMID 22978491 DOI: 10.1186/1471-2164-13-479 |
0.465 |
|
| 2012 |
Tao X, Zheng D, Liu T, Wang P, Zhao W, Zhu M, Jiang X, Zhao Y, Wu X. A novel strategy to construct yeast Saccharomyces cerevisiae strains for very high gravity fermentation. Plos One. 7: e31235. PMID 22363590 DOI: 10.1371/Journal.Pone.0031235 |
0.465 |
|
| 2012 |
Wang PM, Zheng DQ, Liu TZ, Tao XL, Feng MG, Min H, Jiang XH, Wu XC. The combination of glycerol metabolic engineering and drug resistance marker-aided genome shuffling to improve very-high-gravity fermentation performances of industrial Saccharomyces cerevisiae. Bioresource Technology. 108: 203-10. PMID 22269055 DOI: 10.1016/J.Biortech.2011.12.147 |
0.459 |
|
| 2011 |
Zheng DQ, Wu XC, Tao XL, Wang PM, Li P, Chi XQ, Li YD, Yan QF, Zhao YH. Screening and construction of Saccharomyces cerevisiae strains with improved multi-tolerance and bioethanol fermentation performance. Bioresource Technology. 102: 3020-7. PMID 20980141 DOI: 10.1016/J.Biortech.2010.09.122 |
0.469 |
|
| 2011 |
Zheng DQ, Wu XC, Wang PM, Chi XQ, Tao XL, Li P, Jiang XH, Zhao YH. Drug resistance marker-aided genome shuffling to improve acetic acid tolerance in Saccharomyces cerevisiae. Journal of Industrial Microbiology & Biotechnology. 38: 415-22. PMID 20652356 DOI: 10.1007/S10295-010-0784-8 |
0.465 |
|
| 2011 |
Wang P, Wu X, Chi X, Li Y, Zheng D, Ding R, Min H. Development and application of RAPD-SCAR markers to identify intra-species hybrids of industrial Saccharomyces cerevisiae World Journal of Microbiology & Biotechnology. 27: 185-188. DOI: 10.1007/S11274-010-0430-7 |
0.409 |
|
| 2011 |
Wang P, Zheng D, Ding R, Chi X, Tao X, Min H, Wu X. Improvement of ethanol production in Saccharomyces cerevisiae by hetero-expression of GAPN and FPS1 deletion. Journal of Chemical Technology & Biotechnology. 86: 1205-1210. DOI: 10.1002/Jctb.2634 |
0.348 |
|
| 2010 |
Wu X, Chi X, Wang P, Zheng D, Ding R, Li Y. The evolutionary rate variation among genes of HOG-signaling pathway in yeast genomes. Biology Direct. 5: 46. PMID 20618989 DOI: 10.1186/1745-6150-5-46 |
0.312 |
|
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