Lily C Hughes, Ph.D. - Publications

Affiliations: 
2022- Ichthyology North Carolina Museum of Natural Sciences 

15 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Hughes LC, Nash CM, White WT, Westneat MW. Concordance and Discordance in the Phylogenomics of the Wrasses and Parrotfishes (Teleostei: Labridae). Systematic Biology. PMID 36331534 DOI: 10.1093/sysbio/syac072  0.535
2022 Nash CM, Lungstrom LL, Hughes LC, Westneat MW. Phylogenomics and body shape morphometrics reveal recent diversification in the goatfishes (Syngnatharia: Mullidae). Molecular Phylogenetics and Evolution. 177: 107616. PMID 35998799 DOI: 10.1016/j.ympev.2022.107616  0.528
2022 Troyer EM, Betancur-R R, Hughes LC, Westneat M, Carnevale G, White WT, Pogonoski JJ, Tyler JC, Baldwin CC, Ortí G, Brinkworth A, Clavel J, Arcila D. The impact of paleoclimatic changes on body size evolution in marine fishes. Proceedings of the National Academy of Sciences of the United States of America. 119: e2122486119. PMID 35858316 DOI: 10.1073/pnas.2122486119  0.748
2022 González-Castro M, Cardoso YP, Hughes LC, Ortí G. Hybridization is strongly constrained by salinity during secondary contact between silverside fishes (Odontesthes, Atheriniformes). Heredity. PMID 35821279 DOI: 10.1038/s41437-022-00555-9  0.669
2022 Peterson RD, Sullivan JP, Hopkins CD, Santaquiteria A, Dillman CB, Pirro S, Betancur-R R, Arcila D, Hughes LC, Ortí G. Phylogenomics of bonytongue fishes (Osteoglossomorpha) shed light on the craniofacial evolution and biogeography of the weakly electric clade Mormyridae. Systematic Biology. PMID 35041001 DOI: 10.1093/sysbio/syac001  0.781
2021 Atta CJ, Yuan H, Li C, Arcila D, Betancur-R R, Hughes LC, Ortí G, Tornabene L. Exon-capture data and locus screening provide new insights into the phylogeny of flatfishes (Pleuronectoidei). Molecular Phylogenetics and Evolution. 166: 107315. PMID 34537325 DOI: 10.1016/j.ympev.2021.107315  0.786
2021 Arcila D, Hughes LC, Meléndez-Vazquez F, Baldwin CC, White W, Carpenter K, Williams JT, Santos MD, Pogonoski J, Miya M, Ortí G, Betancur-R R. Testing the utility of alternative metrics of branch support to address the ancient evolutionary radiation of tunas, stromateoids, and allies (Teleostei: Pelagiaria). Systematic Biology. PMID 33783539 DOI: 10.1093/sysbio/syab018  0.779
2020 Rincon-Sandoval M, Duarte-Ribeiro E, Davis AM, Santaquiteria A, Hughes LC, Baldwin CC, Soto-Torres L, Acero P A, Walker HJ, Carpenter KE, Sheaves M, Ortí G, Arcila D, Betancur-R R. Evolutionary determinism and convergence associated with water-column transitions in marine fishes. Proceedings of the National Academy of Sciences of the United States of America. PMID 33328271 DOI: 10.1073/pnas.2006511117  0.768
2020 Hughes LC, Ortí G, Saad H, Li C, White WT, Baldwin CC, Crandall KA, Arcila D, Betancur-R R. Exon probe sets and bioinformatics pipelines for all levels of fish phylogenomics. Molecular Ecology Resources. PMID 33084200 DOI: 10.1111/1755-0998.13287  0.775
2020 Hughes LC, Cardoso YP, Sommer JA, Cifuentes R, Cuello M, Somoza GM, González-Castro M, Malabarba LR, Cussac V, Habit EM, Betancur-R R, Ortí G. Biogeography, habitat transitions and hybridization in a radiation of South American silverside fishes revealed by mitochondrial and genomic RAD data. Molecular Ecology. PMID 31919910 DOI: 10.1111/Mec.15350  0.669
2018 Betancur-R R, Arcila D, Vari RP, Hughes LC, Oliveira C, Sabaj MH, Ortí G. Phylogenomic incongruence, hypothesis testing, and taxonomic sampling: The monophyly of characiform fishes. Evolution; International Journal of Organic Evolution. PMID 30426469 DOI: 10.1111/Evo.13649  0.768
2018 Hughes LC, Ortí G, Huang Y, Sun Y, Baldwin CC, Thompson AW, Arcila D, Betancur-R R, Li C, Becker L, Bellora N, Zhao X, Li X, Wang M, Fang C, et al. Comprehensive phylogeny of ray-finned fishes (Actinopterygii) based on transcriptomic and genomic data. Proceedings of the National Academy of Sciences of the United States of America. PMID 29760103 DOI: 10.1073/Pnas.1719358115  0.767
2017 Hughes LC, Somoza GM, Nguyen BN, Bernot JP, González-Castro M, Díaz de Astarloa JM, Ortí G. Transcriptomic differentiation underlying marine-to-freshwater transitions in the South American silversides Odontesthes argentinensis and O. bonariensis (Atheriniformes). Ecology and Evolution. 7: 5258-5268. PMID 28770064 DOI: 10.1002/Ece3.3133  0.639
2016 Oswaldo Tovar Bohórquez M, Mechaly AS, Hughes LC, Campanella D, Ortí G, Canosa LF, Somoza GM. Kisspeptin system in pejerrey fish (Odontesthes bonariensis). Characterization and gene expression pattern during early developmental stages. Comparative Biochemistry and Physiology. Part a, Molecular & Integrative Physiology. PMID 27887945 DOI: 10.1016/J.Cbpa.2016.11.014  0.693
2015 Campanella D, Hughes LC, Unmack PJ, Bloom DD, Piller KR, Ortí G. Multi-locus fossil-calibrated phylogeny of Atheriniformes (Teleostei, Ovalentaria). Molecular Phylogenetics and Evolution. 86: 8-23. PMID 25769409 DOI: 10.1016/J.Ympev.2015.03.001  0.777
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