☰

Kyubong Jo, Ph.D. - Publications

Affiliations: 
2006 University of Wisconsin, Madison, Madison, WI 
Area:
Molecular and computational genomics
Tree Info Similar researchers PubMed Report error

49 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Kannappan S, Jo K, Kim KK, Lee JH. Utilizing peptide-anchored DNA templates for novel programmable nanoparticle assemblies in biological macromolecules: A review. International Journal of Biological Macromolecules. 128427. PMID 38016615 DOI: 10.1016/j.ijbiomac.2023.128427  0.3
2023 Kim Y, Noh C, Yu M, Bae M, Jo K. Negative nanopore sequencing for mapping biochemical processes on DNA molecules. Chemical Communications (Cambridge, England). PMID 37435665 DOI: 10.1039/d3cc02112b  0.364
2023 Bong S, Park CB, Cho SG, Bae J, Hapsari ND, Jin X, Heo S, Lee JE, Hashiya K, Bando T, Sugiyama H, Jung KH, Sung BJ, Jo K. AT-specific DNA visualization revisits the directionality of bacteriophage λ DNA ejection. Nucleic Acids Research. PMID 37158237 DOI: 10.1093/nar/gkad340  0.45
2022 Jin Y, Bae J, Kim TY, Hwang H, Kim T, Yu M, Oh H, Hashiya K, Bando T, Sugiyama H, Jo K. Twelve Colors of Streptavidin-Fluorescent Proteins (SA-FPs): A Versatile Tool to Visualize Genetic Information in Single-Molecule DNA. Analytical Chemistry. PMID 36377840 DOI: 10.1021/acs.analchem.2c04344  0.336
2022 Jin X, Kim YT, Jo K. DNA Visualization Using Fluorescent Proteins. Methods in Molecular Biology (Clifton, N.J.). 2564: 223-246. PMID 36107345 DOI: 10.1007/978-1-0716-2667-2_11  0.428
2022 Kim YT, Oh H, Seo MJ, Lee DH, Shin J, Bong S, Heo S, Hapsari ND, Jo K. 21 Fluorescent Protein-Based DNA Staining Dyes. Molecules (Basel, Switzerland). 27. PMID 36014487 DOI: 10.3390/molecules27165248  0.414
2022 Kim T, Kim S, Noh C, Hwang H, Shin J, Won N, Lee S, Kim D, Jang Y, Hong SJ, Park J, Kim SJ, Jang S, Lim KI, Jo K. Counting DNA molecules on a microchannel surface for quantitative analysis. Talanta. 252: 123826. PMID 35998444 DOI: 10.1016/j.talanta.2022.123826  0.48
2020 Jin X, Hapsari ND, Lee S, Jo K. DNA binding fluorescent proteins as single-molecule probes. The Analyst. PMID 32386402 DOI: 10.1039/D0An00218F  0.516
2020 Kang Y, Cheon NY, Cha J, Kim A, Kim HI, Lee L, Kim KO, Jo K, Lee JY. High-throughput single-molecule imaging system using nano-fabricated trenches and fluorescent DNA-binding proteins. Biotechnology and Bioengineering. PMID 32162675 DOI: 10.1002/Bit.27331  0.537
2020 Kim KI, Yoon S, Chang J, Lee S, Cho HH, Jeong SH, Jo K, Lee JH. Multifunctional Heterogeneous Carbon Nanotube Nanocomposites Assembled by DNA-Binding Peptide Anchors. Small (Weinheim An Der Bergstrasse, Germany). e1905821. PMID 31898870 DOI: 10.1002/Smll.201905821  0.346
2020 Jo K. Fluorescent Protein as a DNA Staining Dye Biophysical Journal. 118. DOI: 10.1016/J.Bpj.2019.11.590  0.415
2019 Shin E, Kim W, Lee S, Bae J, Kim S, Ko W, Seo HS, Lim S, Lee HS, Jo K. Truncated TALE-FP as DNA Staining Dye in a High-salt Buffer. Scientific Reports. 9: 17197. PMID 31748571 DOI: 10.1038/S41598-019-53722-0  0.543
2019 Jin X, Jo K. A Novel Approach for Single Molecule Observation of DNA Loops Formed by ToxR-RNA Polymerase Complex, LacI, and DmpR Biophysical Journal. 116. DOI: 10.1016/J.Bpj.2018.11.1504  0.447
2018 Lee S, Lee Y, Kim Y, Wang C, Park J, Jung GY, Chen Y, Chang R, Ikeda S, Sugiyama H, Jo K. Nanochannel-Confined TAMRA-Polypyrrole Stained DNA Stretching by Varying the Ionic Strength from Micromolar to Millimolar Concentrations. Polymers. 11. PMID 30959999 DOI: 10.3390/Polym11010015  0.508
2018 Park J, Lee S, Won N, Shin E, Kim SH, Chun MY, Gu J, Jung GY, Lim KI, Jo K. Single-molecule DNA visualization using AT-specific red and non-specific green DNA-binding fluorescent proteins. The Analyst. PMID 30310901 DOI: 10.1039/C8An01426D  0.521
2018 Lee S, Kawamoto Y, Vaijayanthi T, Park J, Bae J, Kim-Ha J, Sugiyama H, Jo K. TAMRA-polypyrrole for A/T sequence visualization on DNA molecules. Nucleic Acids Research. PMID 29931115 DOI: 10.1016/J.Bpj.2018.11.1947  0.499
2018 Gubu A, Li L, Yan N, Zheng X, Lee S, Feng M, Li Q, Lei X, Jo K, Tang X. Bioorthogonal metabolic cellular DNA labelling using vinyl thioether modified thymidine and o-quinolinone quinone methide. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 29443432 DOI: 10.1002/Chem.201705917  0.497
2017 Kounovsky-Shafer KL, Hernandez-Ortiz JP, Potamousis K, Tsvid G, Place M, Ravindran P, Jo K, Zhou S, Odijk T, de Pablo JJ, Schwartz DC. Electrostatic confinement and manipulation of DNA molecules for genome analysis. Proceedings of the National Academy of Sciences of the United States of America. PMID 29203667 DOI: 10.1073/Pnas.1711069114  0.657
2017 Kim K, Lee S, Jin X, Kim SJ, Jo K, Lee JH. DNA Imaging: DNA Binding Peptide Directed Synthesis of Continuous DNA Nanowires for Analysis of Large DNA Molecules by Scanning Electron Microscope (Small 2/2017) Small. 13. DOI: 10.1002/Smll.201770005  0.518
2016 Kim KI, Lee S, Jin X, Kim SJ, Jo K, Lee JH. DNA Binding Peptide Directed Synthesis of Continuous DNA Nanowires for Analysis of Large DNA Molecules by Scanning Electron Microscope. Small (Weinheim An Der Bergstrasse, Germany). PMID 27813273 DOI: 10.1002/Smll.201601926  0.519
2016 Lee S, Jo K. Visualization of Surface-tethered Large DNA Molecules with a Fluorescent Protein DNA Binding Peptide. Journal of Visualized Experiments : Jove. PMID 27403566 DOI: 10.3791/54141  0.544
2016 Kang Y, Lee J, Kim J, Oh Y, Kim D, Lee J, Lim S, Jo K. Analysis of alcohol-induced DNA damage in Escherichia coli by visualizing single genomic DNA molecules. The Analyst. PMID 27186604 DOI: 10.1039/C6An00616G  0.425
2016 Lee S, Wang C, Song J, Kim D, Oh Y, Ko W, Lee J, Park J, Lee HS, Jo K. Investigation of various fluorescent protein–DNA binding peptides for effectively visualizing large DNA molecules Rsc Advances. 6: 46291-46298. DOI: 10.1039/C6Ra08683G  0.484
2015 Lee J, Kim Y, Lim S, Jo K. Single-molecule visualization of ROS-induced DNA damage in large DNA molecules. The Analyst. PMID 26661446 DOI: 10.1039/C5An01875G  0.509
2015 Lee S, Oh Y, Lee J, Choe S, Lim S, Lee HS, Jo K, Schwartz DC. DNA binding fluorescent proteins for the direct visualization of large DNA molecules. Nucleic Acids Research. PMID 26264666 DOI: 10.1093/Nar/Gkv834  0.641
2015 Lee J, Kim Y, Lee S, Jo K. Visualization of large elongated DNA molecules. Electrophoresis. 36: 2057-71. PMID 25994517 DOI: 10.1002/Elps.201400479  0.567
2015 Wang H, Nandigana VV, Jo KD, Aluru NR, Timperman AT. Controlling the ionic current rectification factor of a nanofluidic/microfluidic interface with symmetric nanocapillary interconnects. Analytical Chemistry. 87: 3598-605. PMID 25803122 DOI: 10.1021/Ac5019638  0.59
2015 Park H, Kang H, Ko W, Lee W, Jo K, Lee HS. FRET-based analysis of protein-nucleic acid interactions by genetically incorporating a fluorescent amino acid. Amino Acids. 47: 729-34. PMID 25540052 DOI: 10.1007/S00726-014-1900-2  0.379
2015 Lee S, Choe S, Oh Y, Jo K. MALDI-TOF Analysis of Binding between DNA and Peptides Containing Lysine and Tryptophan Mass Spectrometry Letters. 6: 80-84. DOI: 10.5478/Msl.2015.6.3.80  0.428
2015 Lee J, Chang R, Chen Y, Jo K. Single DNA Molecule Swollen and Trapped in Nanoslit Biophysical Journal. 108: 175a. DOI: 10.1016/J.Bpj.2014.11.964  0.544
2014 Lee J, Kim S, Jeong H, Jung GY, Chang R, Chen YL, Jo K. Nanoslit Confined DNA at Low Ionic Strengths. Acs Macro Letters. 3: 926-930. PMID 35596361 DOI: 10.1021/mz500396t  0.429
2014 Yeom T, Lee J, Lee S, Kang S, Kim KR, Han B, Lee HS, Jo K. Mass spectrometric investigation of the role of the linking polypeptide chain in DNA polymerase I. The Analyst. 139: 2432-9. PMID 24695614 DOI: 10.1039/C4An00107A  0.521
2014 Lee J, Kim S, Jeong H, Jung GY, Chang R, Chen YL, Jo K. Nanoslit confined DNA at low ionic strengths Acs Macro Letters. 3: 926-930. DOI: 10.1021/Mz500396T  0.513
2014 Lee J, Jo K. Conformational Transition of Nanoslit Confined DNA at Low Ionic Strengths Biophysical Journal. 106: 275a. DOI: 10.1016/J.Bpj.2013.11.1610  0.429
2013 Kounovsky-Shafer KL, Hernández-Ortiz JP, Jo K, Odijk T, de Pablo JJ, Schwartz DC. Presentation of large DNA molecules for analysis as nanoconfined dumbbells. Macromolecules. 46: 8356-8368. PMID 24683272 DOI: 10.1021/Ma400926H  0.65
2013 Lee J, Park HS, Lim S, Jo K. Visualization of UV-induced damage on single DNA molecules. Chemical Communications (Cambridge, England). 49: 4740-2. PMID 23369943 DOI: 10.1039/C3Cc38884K  0.499
2012 Chang R, Jo K. DNA conformation in nanochannels: Monte Carlo simulation studies using a primitive DNA model. The Journal of Chemical Physics. 136: 095101. PMID 22401472 DOI: 10.1063/1.3682984  0.532
2012 Yeom T, Kim Y, Jo K. Reversible DNA Immobilization on the Neutravidin Coated Surfaces Biophysical Journal. 102: 485a. DOI: 10.1016/J.Bpj.2011.11.2657  0.467
2011 Park S, Jo K, Oh HB. Zinc-finger motif noncovalent interactions with double-stranded DNA characterized by negative-ion electrospray ionization mass spectrometry. The Analyst. 136: 3739-46. PMID 21776495 DOI: 10.1039/C1An15376E  0.42
2011 Kim Y, Kim KS, Kounovsky KL, Chang R, Jung GY, dePablo JJ, Jo K, Schwartz DC. Nanochannel confinement: DNA stretch approaching full contour length. Lab On a Chip. 11: 1721-9. PMID 21431167 DOI: 10.1039/C0Lc00680G  0.628
2011 Kim Y, Jo K. Neutravidin coated surfaces for single DNA molecule analysis. Chemical Communications (Cambridge, England). 47: 6248-50. PMID 21359309 DOI: 10.1039/C0Cc05396A  0.481
2010 Jo K, Kim Y, Jung G. Understanding the Stretching of DNA Molecules Confined in Nanofluidic Channels Biophysical Journal. 98: 193a. DOI: 10.1016/J.Bpj.2009.12.1023  0.567
2009 Jo K, Chen YL, de Pablo JJ, Schwartz DC. Elongation and migration of single DNA molecules in microchannels using oscillatory shear flows. Lab On a Chip. 9: 2348-55. PMID 19636466 DOI: 10.1039/B902292A  0.632
2009 Jo K, Schramm TM, Schwartz DC. A single-molecule barcoding system using nanoslits for DNA analysis : nanocoding. Methods in Molecular Biology (Clifton, N.J.). 544: 29-42. PMID 19488691 DOI: 10.1007/978-1-59745-483-4_3  0.667
2009 Yu H, Jo K, Kounovsky KL, de Pablo JJ, Schwartz DC. Molecular propulsion: chemical sensing and chemotaxis of DNA driven by RNA polymerase. Journal of the American Chemical Society. 131: 5722-3. PMID 19351109 DOI: 10.1021/Ja900372M  0.614
2009 Lee J, Yun Y, Kim Y, Jo K. PDMS Nanoslits without Roof Collapse Bulletin of the Korean Chemical Society. 30: 1793-1797. DOI: 10.5012/Bkcs.2009.30.8.1793  0.414
2007 Jo K, Heien ML, Thompson LB, Zhong M, Nuzzo RG, Sweedler JV. Mass spectrometric imaging of peptide release from neuronal cells within microfluidic devices. Lab On a Chip. 7: 1454-60. PMID 17960271 DOI: 10.1039/B706940E  0.651
2007 Jo K, Dhingra DM, Odijk T, de Pablo JJ, Graham MD, Runnheim R, Forrest D, Schwartz DC. A single-molecule barcoding system using nanoslits for DNA analysis. Proceedings of the National Academy of Sciences of the United States of America. 104: 2673-8. PMID 17296933 DOI: 10.1073/Pnas.0611151104  0.686
2005 Chen YL, Graham MD, de Pablo JJ, Jo K, Schwartz DC. DNA Molecules in Microfluidic Oscillatory Flow. Macromolecules. 38: 6680-6687. PMID 19057656 DOI: 10.1021/Ma050238D  0.496
Show low-probability matches.