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Jian-Kang Zhu - Publications

Affiliations: 
1995-1995 Botany & Microbiology Auburn University, Auburn, AL, United States 
 1996-2003 Plant Sciences University of Arizona, Tucson, AZ 
 2004-2010 Botany and Plant Sciences University of California, Riverside, Riverside, CA, United States 
 2010- Horticulture and Landscape Architecture Purdue University, West Lafayette, IN, United States 
 2017- Shanghai Institute of Plant Physiology and Ecology Chinese Academy of Sciences (CAS) 
Area:
Botany Biology, Genetics, Molecular Biology, Plant Physiology
Website:
https://www.purdue.edu/hla/sites/zhulab/
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Year Citation  Score
2024 Yu S, Wang Y, Li T, Shi H, Kong D, Pang J, Wang Z, Meng H, Gao Y, Wang X, Hong Y, Zhu JK, Zhan X, Wang Z. Chromosome-scale assembly and gene editing of Solanum americanum genome reveals the basis for thermotolerance and fruit anthocyanin composition. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 137: 15. PMID 38184817 DOI: 10.1007/s00122-023-04523-7  0.558
2023 Liu X, Zhu JK, Zhao C. Liquid-liquid phase separation as a major mechanism of plant abiotic stress sensing and responses. Stress Biology. 3: 56. PMID 38078942 DOI: 10.1007/s44154-023-00141-x  0.319
2023 Luo Z, Liu CL, Yang X, Zhu JK, Huang CF. Mitigating cadmium accumulation in rice without compromising growth via modifying the regulatory region of OsNRAMP5. Stress Biology. 3: 34. PMID 37676342 DOI: 10.1007/s44154-023-00117-x  0.652
2023 Wang S, Shen Y, Deng D, Guo L, Zhang Y, Nie Y, Du Y, Zhao X, Ye X, Huang J, Huang H, Zhu JK, Wu W. Orthogroup and phylotranscriptomic analyses identify transcription factors involved in plant cold response: a case study of Arabidopsis BBX29. Plant Communications. 100684. PMID 37674317 DOI: 10.1016/j.xplc.2023.100684  0.364
2023 Zhang H, Zhou J, Kou X, Liu Y, Zhao X, Qin G, Wang M, Qian G, Li W, Huang Y, Wang X, Zhao Z, Li S, Wu X, Jiang L, ... ... Zhu JK, et al. Syntaxin of plants71 plays essential roles in plant development and stress response via regulating pH homeostasis. Frontiers in Plant Science. 14: 1198353. PMID 37342145 DOI: 10.3389/fpls.2023.1198353  0.588
2023 Liu X, Jiang W, Li Y, Nie H, Cui L, Li R, Tan L, Peng L, Li C, Luo J, Li M, Wang H, Yang J, Zhou B, Wang P, ... ... Zhu JK, et al. FERONIA coordinates plant growth and salt tolerance via the phosphorylation of phyB. Nature Plants. PMID 37012430 DOI: 10.1038/s41477-023-01390-4  0.302
2023 Zhu Y, Zhu G, Xu R, Jiao Z, Yang J, Lin T, Wang Z, Huang S, Chong L, Zhu JK. A natural promoter variation of SlBBX31 confers enhanced cold tolerance during tomato domestication. Plant Biotechnology Journal. PMID 36704926 DOI: 10.1111/pbi.14016  0.733
2023 Hong Y, Gao Y, Pang J, Shi H, Li T, Meng H, Kong D, Chen Y, Zhu JK, Wang Z. The Sm core protein SmEb regulates salt stress responses through maintaining proper splicing of RCD1 pre-mRNA in Arabidopsis. Journal of Integrative Plant Biology. PMID 36661041 DOI: 10.1111/jipb.13457  0.367
2023 Gong Z, Zhu JK. Celebrating the discovery of DNA demethylase. Journal of Integrative Plant Biology. 64: 2215-2216. PMID 36478150 DOI: 10.1111/jipb.13424  0.555
2022 Hong Y, Chen Y, Shi H, Kong X, Yao J, Lei M, Zhu JK, Wang Z. SUMO E3 ligase SIZ1 negatively regulates arsenite resistance via depressing GSH biosynthesis in Arabidopsis. Stress Biology. 2: 9. PMID 37676515 DOI: 10.1007/s44154-021-00029-8  0.35
2022 Yu Z, Ren Y, Liu J, Zhu JK, Zhao C. A novel mitochondrial protein is required for cell wall integrity, auxin accumulation and root elongation in Arabidopsis under salt stress. Stress Biology. 2: 13. PMID 37676421 DOI: 10.1007/s44154-022-00036-3  0.364
2022 Guo J, Chai X, Mei Y, Du J, Du H, Shi H, Zhu JK, Zhang H. Acetylproteomics analyses reveal critical features of lysine-ε-acetylation in Arabidopsis and a role of 14-3-3 protein acetylation in alkaline response. Stress Biology. 2: 1. PMID 37676343 DOI: 10.1007/s44154-021-00024-z  0.305
2022 Li C, Ran M, Liu J, Wang X, Wu Q, Zhang Q, Yang J, Yi F, Zhang H, Zhu JK, Zhao C. Functional analysis of CqPORB in the regulation of chlorophyll biosynthesis in . Frontiers in Plant Science. 13: 1083438. PMID 36578328 DOI: 10.3389/fpls.2022.1083438  0.365
2022 Zhao X, Wang J, Jin D, Cheng J, Chen H, Li Z, Wang Y, Lou H, Zhu JK, Du X, Gong Z. AtMCM10 promotes DNA replication-coupled nucleosome assembly in Arabidopsis. Journal of Integrative Plant Biology. PMID 36541721 DOI: 10.1111/jipb.13438  0.631
2022 Zhang H, Gong Z, Zhu JK. Active DNA demethylation in plants: 20 years of discovery and beyond. Journal of Integrative Plant Biology. PMID 36478523 DOI: 10.1111/jipb.13423  0.627
2022 Wang M, Zhang H, Zhao X, Zhou J, Qin G, Liu Y, Kou X, Zhao Z, Wu T, Zhu JK, Feng X, Li L. SYNTAXIN OF PLANTS81 regulates root meristem activity and stem cell niche maintenance via ROS signaling. Plant Physiology. PMID 36427205 DOI: 10.1093/plphys/kiac530  0.539
2022 Yu B, Zheng W, Xing L, Zhu JK, Persson S, Zhao Y. Root twisting drives halotropism via stress-induced microtubule reorientation. Developmental Cell. PMID 36243013 DOI: 10.1016/j.devcel.2022.09.012  0.315
2022 Zhou X, Wei M, Nie W, Xi Y, Li P, Zheng Q, Tang K, Satheesh V, Wang Y, Luo J, Du X, Liu R, Yang Z, La H, Zhong Y, ... ... Zhu JK, et al. The H3K9me2-binding protein AGDP3 limits DNA methylation and transcriptional gene silencing in Arabidopsis. Journal of Integrative Plant Biology. PMID 36149781 DOI: 10.1111/jipb.13369  0.323
2022 Colin L, Ruhnow F, Zhu JK, Zhao C, Zhao Y, Persson S. The cell biology of primary cell walls during salt stress. The Plant Cell. PMID 36149287 DOI: 10.1093/plcell/koac292  0.342
2022 Chang YN, Wang Z, Ren Z, Wang CH, Wang P, Zhu JK, Li X, Duan CG. NUA and ESD4 negatively regulate ABA signaling by inhibiting SnRK2 kinase activity and stability in Arabidopsis. Journal of Integrative Plant Biology. PMID 35984097 DOI: 10.1111/jipb.13349  0.737
2022 Jiang W, Li C, Li L, Li Y, Wang Z, Yu F, Yi F, Zhang J, Zhu JK, Zhang H, Li Y, Zhao C. Genome-Wide Analysis of and Gene Families in and Their Roles in Salt Stress Response. Frontiers in Plant Science. 13: 918594. PMID 35873972 DOI: 10.3389/fpls.2022.918594  0.388
2022 Wang Z, Hong Y, Yao J, Huang H, Qian B, Liu X, Chen Y, Pang J, Zhan X, Zhu JK, Zhu J. Modulation of Plant Development and Chilling Stress Responses by Alternative Splicing Events under Control of the Spliceosome Protein SmEb in Arabidopsis. Plant, Cell & Environment. PMID 35770732 DOI: 10.1111/pce.14386  0.654
2022 Ma X, Zhao X, Zhang H, Zhang Y, Sun S, Li Y, Long Z, Liu Y, Zhang X, Li R, Tan L, Jiang L, Zhu JK, Li L. MAG2 and MAL Regulate Vesicle Trafficking and Auxin Homeostasis With Functional Redundancy. Frontiers in Plant Science. 13: 849532. PMID 35371137 DOI: 10.3389/fpls.2022.849532  0.569
2022 He L, Huang H, Bradai M, Zhao C, You Y, Ma J, Zhao L, Lozano-Durán R, Zhu JK. DNA methylation-free Arabidopsis reveals crucial roles of DNA methylation in regulating gene expression and development. Nature Communications. 13: 1335. PMID 35288562 DOI: 10.1038/s41467-022-28940-2  0.354
2022 Chong L, Xu R, Huang P, Guo P, Zhu M, Du H, Sun X, Ku L, Zhu JK, Zhu Y. The tomato OST1-VOZ1 module regulates drought-mediated flowering. The Plant Cell. PMID 35099557 DOI: 10.1093/plcell/koac026  0.76
2021 Zhu X, Xie S, Tang K, Kalia RK, Liu N, Ma J, Bressan RA, Zhu JK. Publisher Correction: Non-CG DNA methylation-deficiency mutations enhance mutagenesis rates during salt adaptation in cultured Arabidopsis cells. Stress Biology. 1: 16. PMID 37735294 DOI: 10.1007/s44154-021-00017-y  0.693
2021 Wang Z, Wang M, Yang C, Zhao L, Qin G, Peng L, Zheng Q, Nie W, Song CP, Shi H, Zhu JK, Zhao C. SWO1 modulates cell wall integrity under salt stress by interacting with importin ɑ in Arabidopsis. Stress Biology. 1: 9. PMID 37676567 DOI: 10.1007/s44154-021-00010-5  0.659
2021 Zhu X, Xie S, Tang K, Kalia RK, Liu N, Ma J, Bressan RA, Zhu JK. Non-CG DNA methylation-deficiency mutations enhance mutagenesis rates during salt adaptation in cultured Arabidopsis cells. Stress Biology. 1: 12. PMID 37676538 DOI: 10.1007/s44154-021-00013-2  0.754
2021 Hong Y, Yao J, Shi H, Chen Y, Zhu JK, Wang Z. The Arabidopsis spliceosomal protein SmEb modulates ABA responses by maintaining proper alternative splicing of HAB1. Stress Biology. 1: 4. PMID 37676319 DOI: 10.1007/s44154-021-00006-1  0.372
2021 Hua K, Han P, Zhu JK. Improvement of base editors and prime editors advances precision genome engineering in plants. Plant Physiology. PMID 34962995 DOI: 10.1093/plphys/kiab591  0.301
2021 Chen Q, Hu T, Li X, Song CP, Zhu JK, Chen L, Zhao Y. Phosphorylation of SWEET sucrose transporters regulates plant root:shoot ratio under drought. Nature Plants. PMID 34949800 DOI: 10.1038/s41477-021-01040-7  0.617
2021 Lu Y, Wang J, Chen B, Mo S, Lian L, Luo Y, Ding D, Ding Y, Cao Q, Li Y, Li Y, Liu G, Hou Q, Cheng T, Wei J, ... ... Zhu JK, et al. A donor-DNA-free CRISPR/Cas-based approach to gene knock-up in rice. Nature Plants. 7: 1445-1452. PMID 34782773 DOI: 10.1038/s41477-021-01019-4  0.311
2021 Zhao C, Jiang W, Zayed O, Liu X, Tang K, Nie W, Li Y, Xie S, Li Y, Long T, Liu L, Zhu Y, Zhao Y, Zhu JK. The LRXs-RALFs-FER module controls plant growth and salt stress responses by modulating multiple plant hormones. National Science Review. 8: nwaa149. PMID 34691553 DOI: 10.1093/nsr/nwaa149  0.825
2021 Zhang H, Zhu J, Gong Z, Zhu JK. Abiotic stress responses in plants. Nature Reviews. Genetics. PMID 34561623 DOI: 10.1038/s41576-021-00413-0  0.665
2021 Huang P, Huang H, Lin X, Liu P, Zhao L, Nie WF, Zhu JK, Lang Z. MSI4/FVE is required for accumulation of 24-nt siRNAs and DNA methylation at a subset of target regions of RNA-directed DNA methylation. The Plant Journal : For Cell and Molecular Biology. PMID 34314526 DOI: 10.1111/tpj.15441  0.305
2021 Feng Z, Zhan X, Pang J, Liu X, Zhang H, Lang Z, Zhu JK. Genetic Analysis Implicates A Molecular Chaperone Complex in Regulating Epigenetic Silencing of Methylated Genomic Regions. Journal of Integrative Plant Biology. PMID 34289245 DOI: 10.1111/jipb.13155  0.595
2021 You LY, Lin J, Xu HW, Chen CX, Chen JY, Zhang J, Zhang J, Li YX, Ye C, Zhang H, Jiang J, Zhu JK, Li QQ, Duan CG. Intragenic Heterochromatin-mediated Alternative Polyadenylation Modulates MiRNA and Pollen Development in Rice. The New Phytologist. PMID 34289124 DOI: 10.1111/nph.17635  0.689
2021 Guan L, Yang S, Li S, Liu Y, Liu Y, Yang Y, Qin G, Wang H, Wu T, Wang Z, Feng X, Wu Y, Zhu JK, Li X, Li L. AtSEC22 Regulates Cell Morphogenesis via Affecting Cytoskeleton Organization and Stabilities. Frontiers in Plant Science. 12: 635732. PMID 34149743 DOI: 10.3389/fpls.2021.635732  0.54
2021 Niu Q, Song Z, Tang K, Chen L, Wang L, Ban T, Guo Z, Kim C, Zhang H, Duan CG, Zhang H, Zhu JK, Du J, Lang Z. A histone H3K4me1-specific binding protein is required for siRNA accumulation and DNA methylation at a subset of loci targeted by RNA-directed DNA methylation. Nature Communications. 12: 3367. PMID 34099688 DOI: 10.1038/s41467-021-23637-4  0.725
2021 Zhou X, He J, Velanis CN, Zhu Y, He Y, Tang K, Zhu M, Graser L, de Leau E, Wang X, Zhang L, Andy Tao W, Goodrich J, Zhu JK, Zhang CJ. A domesticated Harbinger transposase forms a complex with HDA6 and promotes histone H3 deacetylation at genes but not TEs in Arabidopsis. Journal of Integrative Plant Biology. PMID 33960113 DOI: 10.1111/jipb.13108  0.583
2021 Lin Z, Li Y, Wang Y, Liu X, Ma L, Zhang Z, Mu C, Zhang Y, Peng L, Xie S, Song CP, Shi H, Zhu JK, Wang P. Initiation and amplification of SnRK2 activation in abscisic acid signaling. Nature Communications. 12: 2456. PMID 33911084 DOI: 10.1038/s41467-021-22812-x  0.727
2021 Cui X, Gao K, Wang L, Lv M, Li Z, Zheng D, Wu W, Yao W, Ding L, Li X, Zhu JK, Zhang H. General Control Non-derepressible 1 (AtGCN1) Is Important for Flowering Time, Plant Growth, Seed Development, and the Transcription/Translation of Specific Genes in . Frontiers in Plant Science. 12: 630311. PMID 33868334 DOI: 10.3389/fpls.2021.630311  0.405
2021 Kaushal R, Peng L, Singh SK, Zhang M, Zhang X, Vílchez JI, Wang Z, He D, Yang Y, Lv S, Xu Z, Morcillo RJL, Wang W, Huang W, Paré PW, ... ... Zhu JK, et al. Dicer-like proteins influence Arabidopsis root microbiota independent of RNA-directed DNA methylation. Microbiome. 9: 57. PMID 33637135 DOI: 10.1186/s40168-020-00966-y  0.635
2021 Zhang YZ, Lin J, Ren Z, Chen CX, Miki D, Xie SS, Zhang J, Chang YN, Jiang J, Yan J, Li QQ, Zhu JK, Duan CG. Genome-wide distribution and functions of the AAE complex in epigenetic regulation in Arabidopsis. Journal of Integrative Plant Biology. PMID 33438356 DOI: 10.1111/jipb.13068  0.736
2020 Zhao C, Zhang H, Song C, Zhu JK, Shabala S. Mechanisms of Plant Responses and Adaptation to Soil Salinity. Innovation (New York, N.Y.). 1: 100017. PMID 34557705 DOI: 10.1016/j.xinn.2020.100017  0.344
2020 Liu P, Nie WF, Xiong X, Wang Y, Jiang Y, Huang P, Lin X, Qin G, Huang H, Niu Q, Du J, Lang Z, Lozano-Duran R, Zhu JK. A novel protein complex that regulates active DNA demethylation in Arabidopsis. Journal of Integrative Plant Biology. PMID 33615694 DOI: 10.1111/jipb.13045  0.339
2020 Zhan X, Lu Y, Zhu JK, Botella JR. Genome editing for plant research and crop improvement. Journal of Integrative Plant Biology. PMID 33369120 DOI: 10.1111/jipb.13063  0.586
2020 Guo P, Chong L, Wu F, Hsu CC, Li C, Zhu JK, Zhu Y. Mediator tail module subunits MED16 and MED25 differentially regulate abscisic acid signaling in Arabidopsis. Journal of Integrative Plant Biology. PMID 33369119 DOI: 10.1111/jipb.13062  0.716
2020 Zhang H, Zhao Y, Zhu JK. Thriving under Stress: How Plants Balance Growth and the Stress Response. Developmental Cell. 55: 529-543. PMID 33290694 DOI: 10.1016/j.devcel.2020.10.012  0.346
2020 Zhang YZ, Yuan J, Zhang L, Chen C, Wang Y, Zhang G, Peng L, Xie SS, Jiang J, Zhu JK, Du J, Duan CG. Coupling of H3K27me3 recognition with transcriptional repression through the BAH-PHD-CPL2 complex in Arabidopsis. Nature Communications. 11: 6212. PMID 33277495 DOI: 10.1038/s41467-020-20089-0  0.723
2020 Zeng W, Huang H, Lin X, Zhu C, Kosami KI, Huang C, Zhang H, Duan CG, Zhu JK, Miki D. Roles of DEMETER in regulating DNA methylation in vegetative tissues and pathogen resistance. Journal of Integrative Plant Biology. PMID 33236824 DOI: 10.1111/jipb.13037  0.832
2020 Chen K, Gao J, Sun S, Zhang Z, Yu B, Li J, Xie C, Li G, Wang P, Song CP, Bressan RA, Hua J, Zhu JK, Zhao Y. BONZAI Proteins Control Global Osmotic Stress Responses in Plants. Current Biology : Cb. PMID 33035480 DOI: 10.1016/j.cub.2020.09.016  0.738
2020 Hewage KAH, Yang JF, Wang D, Hao GF, Yang GF, Zhu JK. Chemical Manipulation of Abscisic Acid Signaling: A New Approach to Abiotic and Biotic Stress Management in Agriculture. Advanced Science (Weinheim, Baden-Wurttemberg, Germany). 7: 2001265. PMID 32999840 DOI: 10.1002/advs.202001265  0.317
2020 Kong X, Hong Y, Hsu YF, Huang H, Liu X, Song Z, Zhu JK. SIZ1-mediated SUMOylation of ROS1 Enhances Its Stability and Positively Regulates Active DNA Demethylation in Arabidopsis. Molecular Plant. PMID 32927102 DOI: 10.1016/J.Molp.2020.09.010  0.486
2020 Vílchez JI, Yang Y, He D, Zi H, Peng L, Lv S, Kaushal R, Wang W, Huang W, Liu R, Lang Z, Miki D, Tang K, Paré PW, Song CP, ... Zhu JK, et al. DNA demethylases are required for myo-inositol-mediated mutualism between plants and beneficial rhizobacteria. Nature Plants. PMID 32661278 DOI: 10.1038/S41477-020-0707-2  0.676
2020 Wang Z, Hong Y, Li Y, Shi H, Yao J, Liu X, Wang F, Huang S, Zhu G, Zhu JK. Natural variations in SlSOS1 contribute to the loss of salt tolerance during tomato domestication. Plant Biotechnology Journal. PMID 32634852 DOI: 10.1111/Pbi.13443  0.342
2020 Lu Y, Tian Y, Shen R, Yao Q, Wang M, Chen M, Dong J, Zhang T, Li F, Lei M, Zhu JK. Targeted, efficient sequence insertion and replacement in rice. Nature Biotechnology. PMID 32632302 DOI: 10.1038/S41587-020-0581-5  0.349
2020 Wang Z, Ren Z, Cheng C, Wang T, Ji H, Zhao Y, Deng Z, Zhi L, Lu J, Wu X, Xu S, Cao M, Zhao H, Liu L, Zhu J, et al. Counteraction of ABA-Mediated Inhibition of Seed Germination and Seedling Establishment by ABA Signaling Terminator in Arabidopsis. Molecular Plant. PMID 32619606 DOI: 10.1016/J.Molp.2020.06.011  0.372
2020 Zhu Y, Huang P, Guo P, Chong L, Yu G, Sun X, Hu T, Li Y, Hsu CC, Tang K, Zhou Y, Zhao C, Gao W, Tao WA, Mengiste T, ... Zhu JK, et al. CDK8 is associated with RAP2.6 and SnRK2.6 and positively modulates abscisic acid signaling and drought response in Arabidopsis. The New Phytologist. PMID 32619295 DOI: 10.1111/Nph.16787  0.766
2020 Hong Y, Wang Z, Shi H, Yao J, Liu X, Wang F, Zeng L, Xie Z, Zhu JK. Reciprocal regulation between nicotinamide adenine dinucleotide metabolism and abscisic acid and stress response pathways in Arabidopsis. Plos Genetics. 16: e1008892. PMID 32569316 DOI: 10.1371/Journal.Pgen.1008892  0.511
2020 Yang R, He L, Huang H, Zhu JK, Lozano-Duran R, Zhang H. RNA-directed DNA methylation has an important developmental function in Arabidopsis that is masked by the chromatin remodeller PICKLE. Journal of Integrative Plant Biology. PMID 32515549 DOI: 10.1111/Jipb.12979  0.417
2020 Li J, Yang DL, Huang H, Zhang G, He L, Pang J, Lozano-Durán R, Lang Z, Zhu JK. Epigenetic memory marks determine epiallele stability at loci targeted by de novo DNA methylation. Nature Plants. PMID 32514141 DOI: 10.1038/S41477-020-0671-X  0.388
2020 Zhou HR, Lin RN, Huang HW, Li L, Cai T, Zhu JK, Chen S, He XJ. The CCR4-NOT complex component NOT1 regulates RNA-directed DNA methylation and transcriptional silencing by facilitating Pol IV-dependent siRNA production. The Plant Journal : For Cell and Molecular Biology. PMID 32412137 DOI: 10.1111/Tpj.14818  0.72
2020 Zhong Y, Xie J, Wen S, Wu W, Tan L, Lei M, Shi H, Zhu JK. TPST is involved in fructose regulation of primary root growth in Arabidopsis thaliana. Plant Molecular Biology. PMID 32279151 DOI: 10.1007/S11103-020-01006-X  0.479
2020 Wang X, Ren M, Liu D, Zhang D, Zhang C, Lang Z, Macho AP, Zhang M, Zhu JK. Large-scale eQTL identification in Arabidopsis reveals novel candidate regulators of immune responses and other processes. Journal of Integrative Plant Biology. PMID 32246811 DOI: 10.1111/Jipb.12930  0.581
2020 Gong Z, Xiong L, Shi H, Yang S, Herrera-Estrella LR, Xu G, Chao DY, Li J, Wang PY, Qin F, Li J, Ding Y, Shi Y, Wang Y, Yang Y, ... ... Zhu JK, et al. Plant abiotic stress response and nutrient use efficiency. Science China. Life Sciences. PMID 32246404 DOI: 10.1007/S11427-020-1683-X  0.823
2020 Wang Z, Hong Y, Zhu G, Li Y, Niu Q, Yao J, Hua K, Bai J, Zhu Y, Shi H, Huang S, Zhu JK. Loss of salt tolerance during tomato domestication conferred by variation in a Na /K transporter. The Embo Journal. e103256. PMID 32134151 DOI: 10.15252/Embj.2019103256  0.692
2020 Tang K, Zhao L, Ren Y, Yang S, Zhu JK, Zhao C. The transcription factor ICE1 functions in cold stress response by binding to the promoters of CBF and COR genes. Journal of Integrative Plant Biology. PMID 32068336 DOI: 10.1111/Jipb.12918  0.494
2020 Lin Z, Li Y, Zhang Z, Liu X, Hsu CC, Du Y, Sang T, Zhu C, Wang Y, Satheesh V, Pratibha P, Zhao Y, Song CP, Tao WA, Zhu JK, et al. A RAF-SnRK2 kinase cascade mediates early osmotic stress signaling in higher plants. Nature Communications. 11: 613. PMID 32001690 DOI: 10.1038/S41467-020-14477-9  0.657
2020 Wang P, Hsu CC, Du Y, Zhu P, Zhao C, Fu X, Zhang C, Paez JS, Macho AP, Tao WA, Zhu JK. Mapping proteome-wide targets of protein kinases in plant stress responses. Proceedings of the National Academy of Sciences of the United States of America. PMID 31992638 DOI: 10.1073/Pnas.1919901117  0.376
2020 Yu H, Kong X, Huang H, Wu W, Park J, Yun DJ, Lee BH, Shi H, Zhu JK. STCH4/REIL2 Confers Cold Stress Tolerance in Arabidopsis by Promoting rRNA Processing and CBF Protein Translation. Cell Reports. 30: 229-242.e5. PMID 31914389 DOI: 10.1016/J.Celrep.2019.12.012  0.708
2020 Chai H, Guo J, Zhong Y, Hsu CC, Zou C, Wang P, Zhu JK, Shi H. The plasma-membrane polyamine transporter PUT3 is regulated by the Na /H antiporter SOS1 and protein kinase SOS2. The New Phytologist. PMID 31901205 DOI: 10.1111/Nph.16407  0.362
2020 Zhao C, Jiang W, Zayed O, Liu X, Tang K, Nie W, Li Y, Xie S, Li Y, Long T, Liu L, Zhu Y, Zhao Y, Zhu J. The LRXs-RALFs-FER module controls plant growth and salt stress responses by modulating multiple plant hormones National Science Review. DOI: 10.1093/Nsr/Nwaa149  0.807
2020 Zhao C, Zhang H, Song C, Zhu J, Shabala S. Mechanisms of Plant Responses and Adaptation to Soil Salinity The Innovation. 1: 100017. DOI: 10.1016/J.Xinn.2020.100017  0.669
2019 Mao Y, Botella JR, Liu Y, Zhu JK. Gene editing in plants: progress and challenges. National Science Review. 6: 421-437. PMID 34691892 DOI: 10.1093/nsr/nwz005  0.312
2019 Chang YN, Zhu C, Jiang J, Zhang H, Zhu JK, Duan CG. Epigenetic regulation in plant abiotic stress responses. Journal of Integrative Plant Biology. PMID 31872527 DOI: 10.1111/Jipb.12901  0.758
2019 Chen K, Li GJ, Bressan RA, Song CP, Zhu JK, Zhao Y. Abscisic acid dynamics, signaling and functions in plants. Journal of Integrative Plant Biology. PMID 31850654 DOI: 10.1111/Jipb.12899  0.736
2019 Morcillo RJ, Singh SK, He D, An G, Vílchez JI, Tang K, Yuan F, Sun Y, Shao C, Zhang S, Yang Y, Liu X, Dang Y, Wang W, Gao J, ... ... Zhu JK, et al. Rhizobacterium-derived diacetyl modulates plant immunity in a phosphate-dependent manner. The Embo Journal. e102602. PMID 31802519 DOI: 10.15252/Embj.2019102602  0.629
2019 Hong Y, Wang Z, Liu X, Yao J, Kong X, Shi H, Zhu JK. Two Chloroplast Proteins Negatively Regulate Plant Drought Resistance Through Separate Pathways. Plant Physiology. PMID 31776182 DOI: 10.1104/Pp.19.01106  0.449
2019 Peng F, Zhang W, Zeng W, Zhu JK, Miki D. Gene targeting in Arabidopsis via an all-in-one strategy that uses a translational enhancer to aid Cas9 expression. Plant Biotechnology Journal. PMID 31553828 DOI: 10.1111/Pbi.13265  0.362
2019 Hua K, Tao X, Liang W, Zhang Z, Gou R, Zhu JK. Simplified adenine base editors improve adenine base editing efficiency in rice. Plant Biotechnology Journal. PMID 31469505 DOI: 10.1111/Pbi.13244  0.344
2019 Miao C, Wang Z, Zhang L, Yao J, Hua K, Liu X, Shi H, Zhu JK. The grain yield modulator miR156 regulates seed dormancy through the gibberellin pathway in rice. Nature Communications. 10: 3822. PMID 31444356 DOI: 10.1038/S41467-019-11830-5  0.314
2019 Nie WF, Lei M, Zhang M, Tang K, Huang H, Zhang C, Miki D, Liu P, Yang Y, Wang X, Zhang H, Lang Z, Liu N, Xu X, Yelagandula R, ... ... Zhu JK, et al. Histone acetylation recruits the SWR1 complex to regulate active DNA demethylation in . Proceedings of the National Academy of Sciences of the United States of America. PMID 31363048 DOI: 10.1073/Pnas.1906023116  0.588
2019 Yang R, Hong Y, Ren Z, Tang K, Zhang H, Zhu JK, Zhao C. A Role for PICKLE in the Regulation of Cold and Salt Stress Tolerance in Arabidopsis. Frontiers in Plant Science. 10: 900. PMID 31354770 DOI: 10.3389/Fpls.2019.00900  0.576
2019 Miao C, Wang D, He R, Liu S, Zhu JK. Mutations in MIR396e and MIR396f increase grain size and modulate shoot architecture in rice. Plant Biotechnology Journal. PMID 31336020 DOI: 10.1111/Pbi.13214  0.369
2019 Zhang H, Zhang K, Zhu JK. A model for the aberrant DNA methylomes in aging cells and cancer cells. Biochemical Society Transactions. PMID 31320500 DOI: 10.1042/Bst20180218  0.416
2019 Xu X, Wan W, Jiang G, Xi Y, Huang H, Cai J, Chang Y, Duan CG, Mangrauthia SK, Peng X, Zhu JK, Zhu G. Nucleocytoplasmic Trafficking of the Arabidopsis WD40 Repeat Protein XIW1 Regulates ABI5 Stability and Abscisic Acid Responses. Molecular Plant. PMID 31295628 DOI: 10.1016/J.Molp.2019.07.001  0.741
2019 Putarjunan A, Ruble J, Srivastava A, Zhao C, Rychel AL, Hofstetter AK, Tang X, Zhu JK, Tama F, Zheng N, Torii KU. Bipartite anchoring of SCREAM enforces stomatal initiation by coupling MAP kinases to SPEECHLESS. Nature Plants. PMID 31235876 DOI: 10.1038/S41477-019-0440-X  0.416
2019 Schumann U, Lee JM, Smith NA, Zhong C, Zhu JK, Dennis ES, Millar AA, Wang MB. plays a role in DNA demethylation and disease response in somatic tissues of Arabidopsis. Epigenetics. PMID 31189415 DOI: 10.1080/15592294.2019.1631113  0.496
2019 Wang L, Wang C, Liu X, Cheng J, Li S, Zhu JK, Gong Z. Peroxisomal β-oxidation regulates histone acetylation and DNA methylation in . Proceedings of the National Academy of Sciences of the United States of America. PMID 31064880 DOI: 10.1073/Pnas.1904143116  0.649
2019 Zhao C, Zayed O, Zeng F, Liu C, Zhang L, Zhu P, Hsu CC, Tuncil YE, Tao WA, Carpita NC, Zhu JK. Arabinose biosynthesis is critical for salt stress tolerance in Arabidopsis. The New Phytologist. PMID 31009077 DOI: 10.1111/Nph.15867  0.467
2019 Wang M, Wang Z, Mao Y, Lu Y, Yang R, Tao X, Zhu JK. Optimizing Base Editors for Improved Efficiency and Expanded Editing Scope in Rice. Plant Biotechnology Journal. PMID 30963683 DOI: 10.1111/Pbi.13124  0.391
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2019 Zhu G, Chang Y, Xu X, Tang K, Chen C, Lei M, Zhu JK, Duan CG. EXPORTIN 1A prevents transgene silencing in Arabidopsis by modulating nucleo-cytoplasmic partitioning of HDA6. Journal of Integrative Plant Biology. PMID 30697937 DOI: 10.1111/Jipb.12787  0.741
2019 Zou C, Li L, Miki D, Li D, Tang Q, Xiao L, Rajput S, Deng P, Peng L, Jia W, Huang R, Zhang M, Sun Y, Hu J, Fu X, ... ... Zhu JK, et al. The genome of broomcorn millet. Nature Communications. 10: 436. PMID 30683860 DOI: 10.1038/S41467-019-08409-5  0.369
2019 Yang Y, Tang K, Datsenka TU, Liu W, Lv S, Lang Z, Wang X, Gao J, Wang W, Nie W, Chu Z, Zhang H, Handa AK, Zhu JK, Zhang H. Critical function of DNA methyltransferase 1 in tomato development and regulation of the DNA methylome and transcriptome. Journal of Integrative Plant Biology. PMID 30652405 DOI: 10.1111/Jipb.12778  0.644
2019 Huang H, Liu R, Niu Q, Tang K, Zhang B, Zhang H, Chen K, Zhu JK, Lang Z. Global increase in DNA methylation during orange fruit development and ripening. Proceedings of the National Academy of Sciences of the United States of America. PMID 30635417 DOI: 10.1073/Pnas.1815441116  0.393
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2018 Xiao X, Zhang J, Li T, Fu X, Satheesh V, Niu Q, Lang Z, Zhu JK, Lei M. A Group of SUVH Methyl-DNA Binding Proteins Regulate Expression of the DNA Demethylase ROS1 in Arabidopsis. Journal of Integrative Plant Biology. PMID 30589237 DOI: 10.1111/Jipb.12768  0.422
2018 Feng Z, Zhang Z, Hua K, Gao X, Mao Y, Botella JR, Zhu JK. A Highly Efficient Cell Division-Specific CRISPR/Cas9 System Generates Homozygous Mutants for Multiple Genes in . International Journal of Molecular Sciences. 19. PMID 30544514 DOI: 10.3390/Ijms19123925  0.345
2018 Zhao C, Zayed O, Yu Z, Jiang W, Zhu P, Hsu CC, Zhang L, Tao WA, Lozano-Durán R, Zhu JK. Leucine-rich repeat extensin proteins regulate plant salt tolerance in . Proceedings of the National Academy of Sciences of the United States of America. PMID 30514814 DOI: 10.1073/Pnas.1816991115  0.481
2018 Cheng J, Niu Q, Zhang B, Chen K, Yang R, Zhu JK, Zhang Y, Lang Z. Downregulation of RdDM during strawberry fruit ripening. Genome Biology. 19: 212. PMID 30514401 DOI: 10.1186/S13059-018-1587-X  0.396
2018 Zhang H, Li Y, Zhu JK. Developing naturally stress-resistant crops for a sustainable agriculture. Nature Plants. PMID 30478360 DOI: 10.1038/S41477-018-0309-4  0.366
2018 Duan CG, Zhu JK, Cao X. Retrospective and perspective of plant epigenetics in China. Journal of Genetics and Genomics = Yi Chuan Xue Bao. PMID 30455036 DOI: 10.1016/J.Jgg.2018.09.004  0.767
2018 Zhang C, Du X, Tang K, Yang Z, Pan L, Zhu P, Luo J, Jiang Y, Zhang H, Wan H, Wang X, Wu F, Tao WA, He XJ, Zhang H, ... ... Zhu JK, et al. Arabidopsis AGDP1 links H3K9me2 to DNA methylation in heterochromatin. Nature Communications. 9: 4547. PMID 30382101 DOI: 10.1038/S41467-018-06965-W  0.758
2018 Yang DL, Zhang G, Wang L, Li J, Xu D, Di C, Tang K, Yang L, Zeng L, Miki D, Duan CG, Zhang H, Zhu JK. Four putative SWI2/SNF2 chromatin remodelers have dual roles in regulating DNA methylation in Arabidopsis. Cell Discovery. 4: 55. PMID 30345072 DOI: 10.1038/S41421-018-0056-8  0.739
2018 Zhu H, Xie W, Xu D, Miki D, Tang K, Huang CF, Zhu JK. DNA demethylase ROS1 negatively regulates the imprinting of and seed dormancy in . Proceedings of the National Academy of Sciences of the United States of America. PMID 30266793 DOI: 10.1073/Pnas.1812847115  0.757
2018 Mao Y, Yang X, Zhou Y, Zhang Z, Botella JR, Zhu JK. Manipulating plant RNA-silencing pathways to improve the gene editing efficiency of CRISPR/Cas9 systems. Genome Biology. 19: 149. PMID 30266091 DOI: 10.1186/S13059-018-1529-7  0.457
2018 Böhm J, Messerer M, Müller HM, Scholz-Starke J, Gradogna A, Scherzer S, Maierhofer T, Bazihizina N, Zhang H, Stigloher C, Ache P, Al-Rasheid KAS, Mayer KFX, Shabala S, Carpaneto A, ... ... Zhu JK, et al. Understanding the Molecular Basis of Salt Sequestration in Epidermal Bladder Cells of Chenopodium quinoa. Current Biology : Cb. PMID 30245105 DOI: 10.1016/J.Cub.2018.08.004  0.301
2018 Zhang Y, Zhao C, Li L, Hsu CC, Zhu JK, Iliuk A, Tao WA. High-throughput Phosphorylation Screening and Validation through Ti(IV)-Nanopolymer Functionalized Reverse Phase PhosphoProtein Array. Analytical Chemistry. PMID 30103608 DOI: 10.1021/Acs.Analchem.8B01843  0.334
2018 Ohta M, Sato A, Renhu N, Yamamoto T, Oka N, Zhu JK, Tada Y, Suzaki T, Miura K. MYC-type transcription factors, MYC67 and MYC70, interact with ICE1 and negatively regulate cold tolerance in Arabidopsis. Scientific Reports. 8: 11622. PMID 30072714 DOI: 10.1038/S41598-018-29722-X  0.435
2018 Hua K, Tao X, Zhu JK. Expanding the base editing scope in rice by using Cas9 variants. Plant Biotechnology Journal. PMID 30051586 DOI: 10.1111/Pbi.12993  0.307
2018 Hsu CC, Zhu Y, Arrington JV, Paez JS, Wang P, Zhu P, Chen IH, Zhu JK, Tao WA. Universal plant phosphoproteomics workflow and its application to tomato signaling in response to cold stress. Molecular & Cellular Proteomics : McP. PMID 30006488 DOI: 10.1074/Mcp.Tir118.000702  0.744
2018 Zhao Y, Zhang Z, Gao J, Wang P, Hu T, Wang Z, Hou YJ, Wan Y, Liu W, Xie S, Lu T, Xue L, Liu Y, Macho AP, Tao WA, ... ... Zhu JK, et al. Arabidopsis Duodecuple Mutant of PYL ABA Receptors Reveals PYL Repression of ABA-Independent SnRK2 Activity. Cell Reports. 23: 3340-3351.e5. PMID 29898403 DOI: 10.1016/J.Celrep.2018.05.044  0.768
2018 Zhang H, Lang Z, Zhu JK. Dynamics and function of DNA methylation in plants. Nature Reviews. Molecular Cell Biology. PMID 29784956 DOI: 10.1038/S41580-018-0016-Z  0.455
2018 Park J, Lim CJ, Shen M, Park HJ, Cha JY, Iniesto E, Rubio V, Mengiste T, Zhu JK, Bressan RA, Lee SY, Lee BH, Jin JB, Pardo JM, Kim WY, et al. Epigenetic switch from repressive to permissive chromatin in response to cold stress. Proceedings of the National Academy of Sciences of the United States of America. PMID 29784800 DOI: 10.1073/Pnas.1721241115  0.753
2018 Miao C, Xiao L, Hua K, Zou C, Zhao Y, Bressan RA, Zhu JK. Mutations in a subfamily of abscisic acid receptor genes promote rice growth and productivity. Proceedings of the National Academy of Sciences of the United States of America. PMID 29784797 DOI: 10.1073/Pnas.1804774115  0.589
2018 Miki D, Zhang W, Zeng W, Feng Z, Zhu JK. CRISPR/Cas9-mediated gene targeting in Arabidopsis using sequential transformation. Nature Communications. 9: 1967. PMID 29773790 DOI: 10.1038/S41467-018-04416-0  0.412
2018 Wang M, Mao Y, Lu Y, Wang Z, Tao X, Zhu JK. Multiplex gene editing in rice with simplified CRISPR-Cpf1 and CRISPR-Cas9 systems. Journal of Integrative Plant Biology. PMID 29762900 DOI: 10.1111/Jipb.12667  0.349
2018 Qi J, Song CP, Wang B, Zhou J, Kangasjärvi J, Zhu JK, Gong Z. ROS signaling and stomatal movement in plant responses to drought stress and pathogen attack. Journal of Integrative Plant Biology. PMID 29660240 DOI: 10.1111/Jipb.12654  0.744
2018 Wang K, He J, Zhao Y, Wu T, Zhou X, Ding Y, Kong L, Wang X, Wang Y, Li J, Song CP, Wang BS, Yang S, Zhu JK, Gong Z. EAR1 negatively regulates ABA signaling by enhancing 2C protein phosphatase activity. The Plant Cell. PMID 29618630 DOI: 10.1105/Tpc.17.00875  0.733
2018 Chen HH, Qu L, Xu ZH, Zhu JK, Xue HW. EL1-like casein kinases suppress ABA signaling and responses by phosphorylating and destabilizing ABA receptors PYR/PYLs in Arabidopsis. Molecular Plant. PMID 29505832 DOI: 10.1016/J.Molp.2018.02.012  0.397
2018 He L, Wu W, Zinta G, Yang L, Wang D, Liu R, Zhang H, Zheng Z, Huang H, Zhang Q, Zhu JK. A naturally occurring epiallele associates with leaf senescence and local climate adaptation in Arabidopsis accessions. Nature Communications. 9: 460. PMID 29386641 DOI: 10.1038/S41467-018-02839-3  0.354
2018 Zhang J, Zhang H, Srivastava AK, Pan Y, Bai J, Fang J, Shi H, Zhu JK. Knock-down of rice microRNA166 confers drought resistance by causing leaf rolling and altering stem xylem development. Plant Physiology. PMID 29367235 DOI: 10.1104/Pp.17.01432  0.409
2018 Rosas-Diaz T, Zhang D, Fan P, Wang L, Ding X, Jiang Y, Jimenez-Gongora T, Medina-Puche L, Zhao X, Feng Z, Zhang G, Liu X, Bejarano ER, Tan L, Zhang H, ... Zhu JK, et al. A virus-targeted plant receptor-like kinase promotes cell-to-cell spread of RNAi. Proceedings of the National Academy of Sciences of the United States of America. PMID 29363594 DOI: 10.1073/Pnas.1715556115  0.37
2018 Wang YG, Fu FL, Yu HQ, Hu T, Zhang YY, Tao Y, Zhu JK, Zhao Y, Li WC. Interaction network of core ABA signaling components in maize. Plant Molecular Biology. PMID 29344831 DOI: 10.1007/S11103-017-0692-7  0.41
2018 Wang Z, Wang F, Hong Y, Yao J, Ren Z, Shi H, Zhu J. The Flowering Repressor SVP Confers Drought Resistance in Arabidopsis by Regulating Abscisic Acid Catabolism Molecular Plant. 11: 1184-1197. DOI: 10.1016/J.Molp.2018.06.009  0.511
2017 Zhang H, Zhu JK. New discoveries generate new questions about RNA-directed DNA methylation in Arabidopsis. National Science Review. 4: 10-15. PMID 30034910 DOI: 10.1093/Nsr/Nwx008  0.354
2017 Wang P, Zhao Y, Li Z, Hsu CC, Liu X, Fu L, Hou YJ, Du Y, Xie S, Zhang C, Gao J, Cao M, Huang X, Zhu Y, Tang K, ... ... Zhu JK, et al. Reciprocal Regulation of the TOR Kinase and ABA Receptor Balances Plant Growth and Stress Response. Molecular Cell. PMID 29290610 DOI: 10.1016/J.Molcel.2017.12.002  0.833
2017 Zhu Y, Wang B, Tang K, Hsu CC, Xie S, Du H, Yang Y, Tao WA, Zhu JK. An Arabidopsis Nucleoporin NUP85 modulates plant responses to ABA and salt stress. Plos Genetics. 13: e1007124. PMID 29232718 DOI: 10.1371/Journal.Pgen.1007124  0.829
2017 Gu J, Xia Z, Luo Y, Jiang X, Qian B, Xie H, Zhu JK, Xiong L, Zhu J, Wang ZY. Spliceosomal protein U1A is involved in alternative splicing and salt stress tolerance in Arabidopsis thaliana. Nucleic Acids Research. PMID 29228330 DOI: 10.1093/Nar/Gkx1229  0.805
2017 Srivastava AK, Lu Y, Zinta G, Lang Z, Zhu JK. UTR-Dependent Control of Gene Expression in Plants. Trends in Plant Science. PMID 29223924 DOI: 10.1016/J.Tplants.2017.11.003  0.498
2017 Zhang J, Zhang H, Botella JR, Zhu JK. Generation of new glutinous rice by CRISPR/Cas9-targeted mutagenesis of the Waxy gene in elite rice varieties. Journal of Integrative Plant Biology. PMID 29210506 DOI: 10.1111/Jipb.12620  0.379
2017 Cho S, Yu SI, Park J, Mao Y, Zhu JK, Yun DJ, Lee BH. Accession-Dependent CBF Gene Deletion by CRISPR/Cas System in Arabidopsis. Frontiers in Plant Science. 8: 1910. PMID 29163623 DOI: 10.3389/Fpls.2017.01910  0.673
2017 Wang D, Gu J, David R, Wang Z, Yang S, Searle IR, Zhu JK, Timmis JN. Experimental reconstruction of double-strand break repair-mediated plastid DNA insertion into the tobacco nucleus. The Plant Journal : For Cell and Molecular Biology. PMID 29155472 DOI: 10.1111/Tpj.13769  0.354
2017 de Dios Barajas-Lopez J, Moreno JR, Gamez-Arjona FM, Pardo JM, Punkkinen M, Zhu JK, Quintero FJ, Fujii H. Upstream kinases of plant SnRKs are involved in salt stress tolerance. The Plant Journal : For Cell and Molecular Biology. PMID 29094495 DOI: 10.1111/Tpj.13761  0.445
2017 Cao MJ, Zhang YL, Liu X, Huang H, Zhou XE, Wang WL, Zeng A, Zhao CZ, Si T, Du J, Wu WW, Wang FX, Xu HE, Zhu JK. Combining chemical and genetic approaches to increase drought resistance in plants. Nature Communications. 8: 1183. PMID 29084945 DOI: 10.1038/S41467-017-01239-3  0.42
2017 Ren Z, Wang Z, Zhou XE, Shi H, Hong Y, Cao M, Chan Z, Liu X, Xu HE, Zhu JK. Structure determination and activity manipulation of the turfgrass ABA receptor FePYR1. Scientific Reports. 7: 14022. PMID 29070857 DOI: 10.1038/S41598-017-14101-9  0.373
2017 Zhao C, Wang P, Si T, Hsu CC, Wang L, Zayed O, Yu Z, Zhu Y, Dong J, Tao WA, Zhu JK. MAP Kinase Cascades Regulate the Cold Response by Modulating ICE1 Protein Stability. Developmental Cell. PMID 29056551 DOI: 10.1016/J.Devcel.2017.09.024  0.741
2017 Zhao Y, Gao J, Im Kim J, Chen K, Bressan RA, Zhu JK. Control of Plant Water Use by ABA Induction of Senescence and Dormancy: An Overlooked Lesson from Evolution. Plant & Cell Physiology. 58: 1319-1327. PMID 28961993 DOI: 10.1093/Pcp/Pcx086  0.601
2017 Duan CG, Wang X, Zhang L, Xiong X, Zhang Z, Tang K, Pan L, Hsu CC, Xu H, Tao WA, Zhang H, Zhu JK. A protein complex regulates RNA processing of intronic heterochromatin-containing genes in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. PMID 28808009 DOI: 10.1073/pnas.1710683114  0.779
2017 Si T, Wang X, Wu L, Zhao C, Zhang L, Huang M, Cai J, Zhou Q, Dai T, Zhu JK, Jiang D. Nitric Oxide and Hydrogen Peroxide Mediate Wounding-Induced Freezing Tolerance through Modifications in Photosystem and Antioxidant System in Wheat. Frontiers in Plant Science. 8: 1284. PMID 28769973 DOI: 10.3389/Fpls.2017.01284  0.384
2017 Tang K, Duan CG, Zhang H, Zhu JK. Computational Analysis of Genome-Wide ARGONAUTE-Dependent DNA Methylation in Plants. Methods in Molecular Biology (Clifton, N.J.). 1640: 219-225. PMID 28608346 DOI: 10.1007/978-1-4939-7165-7_16  0.702
2017 Duan CG, Zhu JK. Dissecting the Subnuclear Localization Patterns of Argonaute Proteins and Other Components of the RNA-Directed DNA Methylation Pathway in Plants. Methods in Molecular Biology (Clifton, N.J.). 1640: 129-135. PMID 28608338 DOI: 10.1007/978-1-4939-7165-7_8  0.743
2017 Yang R, Zheng Z, Chen Q, Yang L, Huang H, Miki D, Wu W, Zeng L, Liu J, Zhou JX, Ogas J, Zhu JK, He XJ, Zhang H. The developmental regulator PKL is required to maintain correct DNA methylation patterns at RNA-directed DNA methylation loci. Genome Biology. 18: 103. PMID 28569170 DOI: 10.1186/S13059-017-1226-Y  0.706
2017 Lang Z, Wang Y, Tang K, Tang D, Datsenka T, Cheng J, Zhang Y, Handa AK, Zhu JK. Critical roles of DNA demethylation in the activation of ripening-induced genes and inhibition of ripening-repressed genes in tomato fruit. Proceedings of the National Academy of Sciences of the United States of America. PMID 28507144 DOI: 10.1073/Pnas.1705233114  0.467
2017 Zhang H, Zhang J, Yan J, Gou F, Mao Y, Tang G, Botella JR, Zhu JK. Short tandem target mimic rice lines uncover functions of miRNAs in regulating important agronomic traits. Proceedings of the National Academy of Sciences of the United States of America. PMID 28461499 DOI: 10.1073/Pnas.1703752114  0.396
2017 Yang Y, Wang W, Chu Z, Zhu JK, Zhang H. Roles of Nuclear Pores and Nucleo-cytoplasmic Trafficking in Plant Stress Responses. Frontiers in Plant Science. 8: 574. PMID 28446921 DOI: 10.3389/Fpls.2017.00574  0.494
2017 Yan J, Wang P, Wang B, Hsu CC, Tang K, Zhang H, Hou YJ, Zhao Y, Wang Q, Zhao C, Zhu X, Tao WA, Li J, Zhu JK. The SnRK2 kinases modulate miRNA accumulation in Arabidopsis. Plos Genetics. 13: e1006753. PMID 28419088 DOI: 10.1371/Journal.Pgen.1006753  0.379
2017 Miki D, Zhu P, Zhang W, Mao Y, Feng Z, Huang H, Zhang H, Li Y, Liu R, Zhang H, Qi Y, Zhu JK. Efficient Generation of diRNAs Requires Components in the Posttranscriptional Gene Silencing Pathway. Scientific Reports. 7: 301. PMID 28331197 DOI: 10.1038/S41598-017-00374-7  0.444
2017 Wang M, Mao Y, Lu Y, Tao X, Zhu JK. Multiplex Gene Editing in Rice using the CRISPR-Cpf1 System. Molecular Plant. PMID 28315752 DOI: 10.1016/J.Molp.2017.03.001  0.421
2017 Ye YJ, Zhou L, Liu X, Liu H, Li D, Cao M, Chen H, Xu L, Zhu J, Zhao Y. A novel chemical inhibitor of ABA signaling targets all ABA receptors. Plant Physiology. PMID 28193765 DOI: 10.1104/Pp.16.01862  0.363
2017 Wang D, Qu Z, Yang L, Zhang Q, Liu ZH, Do T, Adelson DL, Wang ZY, Searle I, Zhu JK. Transposable elements (TEs) contribute to stress-related long intergenic noncoding RNAs in Plants. The Plant Journal : For Cell and Molecular Biology. PMID 28106309 DOI: 10.1111/Tpj.13481  0.492
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2016 Duan CG, Wang X, Xie S, Pan L, Miki D, Tang K, Hsu CC, Lei M, Zhong Y, Hou YJ, Wang Z, Zhang Z, Mangrauthia SK, Xu H, Zhang H, ... ... Zhu JK, et al. A pair of transposon-derived proteins function in a histone acetyltransferase complex for active DNA demethylation. Cell Research. PMID 27934869 DOI: 10.1038/Cr.2016.147  0.816
2016 Yan J, Zhao C, Zhou J, Yang Y, Wang P, Zhu X, Tang G, Bressan RA, Zhu JK. The miR165/166 Mediated Regulatory Module Plays Critical Roles in ABA Homeostasis and Response in Arabidopsis thaliana. Plos Genetics. 12: e1006416. PMID 27812104 DOI: 10.1371/Journal.Pgen.1006416  0.586
2016 Yang DL, Zhang G, Tang K, Li J, Yang L, Huang H, Zhang H, Zhu JK. Dicer-independent RNA-directed DNA methylation in Arabidopsis. Cell Research. 26: 1264. PMID 27811943 DOI: 10.1038/Cr.2016.122  0.377
2016 Tang K, Lang Z, Zhang H, Zhu JK. The DNA demethylase ROS1 targets genomic regions with distinct chromatin modifications. Nature Plants. 2: 16169. PMID 27797352 DOI: 10.1038/Nplants.2016.169  0.393
2016 Wang Z, Wang F, Hong Y, Huang J, Shi H, Zhu JK. Two Chloroplast Proteins Suppress Drought Resistance by Affecting ROS production in guard cells. Plant Physiology. PMID 27744298 DOI: 10.1104/Pp.16.00889  0.434
2016 Zhu JK. Abiotic Stress Signaling and Responses in Plants. Cell. 167: 313-324. PMID 27716505 DOI: 10.1016/j.cell.2016.08.029  0.346
2016 Wang Y, Xue X, Zhu JK, Dong J. Demethylation of ERECTA receptor genes by IBM1 histone demethylase affects stomatal development. Development (Cambridge, England). PMID 27697902 DOI: 10.1242/Dev.129932  0.485
2016 Mao Y, Botella JR, Zhu JK. Heritability of targeted gene modifications induced by plant-optimized CRISPR systems. Cellular and Molecular Life Sciences : Cmls. PMID 27677493 DOI: 10.1007/S00018-016-2380-1  0.461
2016 Yang Y, La H, Tang K, Miki D, Yang L, Wang B, Duan CG, Nie W, Wang X, Wang S, Pan Y, Tran EJ, An L, Zhang H, Zhu JK. SAC3B, a central component of the mRNA export complex TREX-2, is required for prevention of epigenetic gene silencing in Arabidopsis. Nucleic Acids Research. PMID 27672037 DOI: 10.1093/Nar/Gkw850  0.806
2016 Lang Z, Xie S, Zhu JK. The 1001 Arabidopsis DNA Methylomes: An Important Resource for Studying Natural Genetic, Epigenetic, and Phenotypic Variation. Trends in Plant Science. PMID 27645898 DOI: 10.1016/J.Tplants.2016.09.001  0.64
2016 Wang L, Li H, Zhao C, Li S, Kong L, Wu W, Kong W, Liu Y, Wei Y, Zhu JK, Zhang H. The Inhibition of Protein Translation Mediated by AtGCN1 is Essential for Cold Tolerance in Arabidopsis thaliana. Plant, Cell & Environment. PMID 27577186 DOI: 10.1111/Pce.12826  0.474
2016 Zhang Q, Li Y, Xu T, Srivastava AK, Wang D, Zeng L, Yang L, He L, Zhang H, Zheng Z, Yang DL, Zhao C, Dong J, Gong Z, Liu R, ... Zhu JK, et al. The chromatin remodeler DDM1 promotes hybrid vigor by regulating salicylic acid metabolism. Cell Discovery. 2: 16027. PMID 27551435 DOI: 10.1038/Celldisc.2016.27  0.692
2016 Zhao C, Zhu JK. The broad roles of CBF genes: from development to abiotic stress. Plant Signaling & Behavior. 0. PMID 27472659 DOI: 10.1080/15592324.2016.1215794  0.483
2016 Xing L, Zhao Y, Gao J, Xiang C, Zhu JK. The ABA receptor PYL9 together with PYL8 plays an important role in regulating lateral root growth. Scientific Reports. 6: 27177. PMID 27256015 DOI: 10.1038/Srep27177  0.44
2016 Zhao C, Zhang Z, Xie S, Si T, Li Y, Zhu JK. Mutational Evidence for the Critical Role of CBF Genes in Cold Acclimation in Arabidopsis. Plant Physiology. PMID 27252305 DOI: 10.1104/Pp.16.00533  0.704
2016 Zhang J, Xie S, Zhu JK, Gong Z. Requirement for flap endonuclease 1 (FEN1) to maintain genomic stability and transcriptional gene silencing in Arabidopsis. The Plant Journal : For Cell and Molecular Biology. PMID 27231839 DOI: 10.1111/Tpj.13224  0.777
2016 Zhang J, Xie S, Cheng J, Lai J, Zhu JK, Gong Z. The second subunit of DNA-polymerase delta is required for genomic stability and epigenetic regulation. Plant Physiology. PMID 27208288 DOI: 10.1104/Pp.15.01976  0.771
2016 Wang S, Bai G, Wang S, Yang L, Yang F, Wang Y, Zhu JK, Hua J. Chloroplast RNA-Binding Protein RBD1 Promotes Chilling Tolerance through 23S rRNA Processing in Arabidopsis. Plos Genetics. 12: e1006027. PMID 27138552 DOI: 10.1371/Journal.Pgen.1006027  0.487
2016 Zhan X, Yang L, Wang D, Zhu JK, Lang Z. De novo assembly and analysis of the transcriptome of Ocimum americanum var. pilosum under cold stress. Bmc Genomics. 17: 209. PMID 26955811 DOI: 10.1186/S12864-016-2507-7  0.585
2016 Hou YJ, Zhu Y, Wang P, Zhao Y, Xie S, Batelli G, Wang B, Duan CG, Wang X, Xing L, Lei M, Yan J, Zhu X, Zhu JK. Type One Protein Phosphatase 1 and Its Regulatory Protein Inhibitor 2 Negatively Regulate ABA Signaling. Plos Genetics. 12: e1005835. PMID 26943172 DOI: 10.1371/Journal.Pgen.1005835  0.832
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2015 Zhang S, Zhan X, Xu X, Cui P, Zhu JK, Xia Y, Xiong L. Two domain-disrupted hda6 alleles have opposite epigenetic effects on transgenes and some endogenous targets. Scientific Reports. 5: 17832. PMID 26666962 DOI: 10.1038/Srep17832  0.819
2015 Zhang Z, Mao Y, Ha S, Liu W, Botella JR, Zhu JK. A multiplex CRISPR/Cas9 platform for fast and efficient editing of multiple genes in Arabidopsis. Plant Cell Reports. PMID 26661595 DOI: 10.1007/S00299-015-1900-Z  0.429
2015 Yang DL, Zhang G, Tang K, Li J, Yang L, Huang H, Zhang H, Zhu JK. Dicer-independent RNA-directed DNA methylation in Arabidopsis. Cell Research. PMID 26642813 DOI: 10.1038/Cr.2015.145  0.46
2015 Chan Z, Wang Y, Cao M, Gong Y, Mu Z, Wang H, Hu Y, Deng X, He XJ, Zhu JK. RDM4 modulates cold stress resistance in Arabidopsis partially through the CBF-mediated pathway. The New Phytologist. PMID 26522658 DOI: 10.1111/Nph.13727  0.765
2015 Yamamuro C, Zhu JK, Yang Z. Epigenetic modifications and plant hormone action. Molecular Plant. PMID 26520015 DOI: 10.1016/J.Molp.2015.10.008  0.435
2015 Duan CG, Wang X, Tang K, Zhang H, Mangrauthia SK, Lei M, Hsu CC, Hou YJ, Wang C, Li Y, Tao WA, Zhu JK. MET18 Connects the Cytosolic Iron-Sulfur Cluster Assembly Pathway to Active DNA Demethylation in Arabidopsis. Plos Genetics. 11: e1005559. PMID 26492035 DOI: 10.1371/Journal.Pgen.1005559  0.779
2015 Zhan X, Qian B, Cao F, Wu W, Yang L, Guan Q, Gu X, Wang P, Okusolubo TA, Dunn SL, Zhu JK, Zhu J. An Arabidopsis PWI and RRM motif-containing protein is critical for pre-mRNA splicing and ABA responses. Nature Communications. 6: 8139. PMID 26404089 DOI: 10.1038/Ncomms9139  0.67
2015 Mao Y, Zhang Z, Feng Z, Wei P, Zhang H, Botella JR, Zhu JK. Development of germ-line-specific CRISPR-Cas9 systems to improve the production of heritable gene modifications in Arabidopsis. Plant Biotechnology Journal. PMID 26360626 DOI: 10.1111/Pbi.12468  0.416
2015 Zhao C, Lang Z, Zhu JK. Cold responsive gene transcription becomes more complex. Trends in Plant Science. PMID 26072094 DOI: 10.1016/J.Tplants.2015.06.001  0.399
2015 Wang P, Zhu JK, Lang Z. Nitric oxide suppresses the inhibitory effect of abscisic acid on seed germination by S-nitrosylation of SnRK2 proteins. Plant Signaling & Behavior. 10: e1031939. PMID 26024299 DOI: 10.1080/15592324.2015.1031939  0.378
2015 Zhang H, Zhu J. Protecting genes from RNA silencing by destroying aberrant transcripts. Science China. Life Sciences. 58: 613-5. PMID 25994414 DOI: 10.1007/S11427-015-4871-Y  0.371
2015 Zheng Z, Yu H, Miki D, Jin D, Zhang Q, Ren Z, Gong Z, Zhang H, Zhu JK. Involvement of Multiple Gene-Silencing Pathways in a Paramutation-like Phenomenon in Arabidopsis. Cell Reports. 11: 1160-7. PMID 25981044 DOI: 10.1016/J.Celrep.2015.04.034  0.683
2015 Li Y, Duan CG, Zhu X, Qian W, Zhu JK. A DNA ligase required for active DNA demethylation and genomic imprinting in Arabidopsis. Cell Research. 25: 757-60. PMID 25906993 DOI: 10.1038/Cr.2015.45  0.797
2015 Xiao L, Yang G, Zhang L, Yang X, Zhao S, Ji Z, Zhou Q, Hu M, Wang Y, Chen M, Xu Y, Jin H, Xiao X, Hu G, Bao F, ... ... Zhu JK, et al. The resurrection genome of Boea hygrometrica: A blueprint for survival of dehydration. Proceedings of the National Academy of Sciences of the United States of America. 112: 5833-7. PMID 25902549 DOI: 10.1073/Pnas.1505811112  0.434
2015 Zhang H, Gou F, Zhang J, Liu W, Li Q, Mao Y, Botella JR, Zhu JK. TALEN-mediated targeted mutagenesis produces a large variety of heritable mutations in rice. Plant Biotechnology Journal. PMID 25867543 DOI: 10.1111/Pbi.12372  0.312
2015 Zhang Y, Wang P, Shao W, Zhu JK, Dong J. The BASL polarity protein controls a MAPK signaling feedback loop in asymmetric cell division. Developmental Cell. 33: 136-49. PMID 25843888 DOI: 10.1016/J.Devcel.2015.02.022  0.32
2015 Lind C, Dreyer I, López-Sanjurjo EJ, von Meyer K, Ishizaki K, Kohchi T, Lang D, Zhao Y, Kreuzer I, Al-Rasheid KA, Ronne H, Reski R, Zhu JK, Geiger D, Hedrich R. Stomatal guard cells co-opted an ancient ABA-dependent desiccation survival system to regulate stomatal closure. Current Biology : Cb. 25: 928-35. PMID 25802151 DOI: 10.1016/J.Cub.2015.01.067  0.406
2015 Lei M, Zhang H, Julian R, Tang K, Xie S, Zhu JK. Regulatory link between DNA methylation and active demethylation in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. 112: 3553-7. PMID 25733903 DOI: 10.1073/Pnas.1502279112  0.697
2015 Lang Z, Lei M, Wang X, Tang K, Miki D, Zhang H, Mangrauthia SK, Liu W, Nie W, Ma G, Yan J, Duan CG, Hsu CC, Wang C, Tao WA, ... ... Zhu JK, et al. The methyl-CpG-binding protein MBD7 facilitates active DNA demethylation to limit DNA hyper-methylation and transcriptional gene silencing. Molecular Cell. 57: 971-83. PMID 25684209 DOI: 10.1016/J.Molcel.2015.01.009  0.82
2015 Lang Z, Zhu J. OST1 phosphorylates ICE1 to enhance plant cold tolerance. Science China. Life Sciences. 58: 317-8. PMID 25680856 DOI: 10.1007/S11427-015-4822-7  0.391
2015 Zhan X, Zhu JK, Lang Z. Increasing freezing tolerance: kinase regulation of ICE1. Developmental Cell. 32: 257-8. PMID 25669879 DOI: 10.1016/J.Devcel.2015.01.004  0.638
2015 Wang B, Duan CG, Wang X, Hou YJ, Yan J, Gao C, Kim JH, Zhang H, Zhu JK. HOS1 regulates Argonaute1 by promoting transcription of the microRNA gene MIR168b in Arabidopsis. The Plant Journal : For Cell and Molecular Biology. 81: 861-70. PMID 25619693 DOI: 10.1111/Tpj.12772  0.793
2015 Wang C, Dong X, Jin D, Zhao Y, Xie S, Li X, He X, Lang Z, Lai J, Zhu JK, Gong Z. Methyl-CpG-binding domain protein MBD7 is required for active DNA demethylation in Arabidopsis. Plant Physiology. 167: 905-14. PMID 25593350 DOI: 10.1104/Pp.114.252106  0.79
2015 Li Y, Córdoba-Cañero D, Qian W, Zhu X, Tang K, Zhang H, Ariza RR, Roldán-Arjona T, Zhu JK. An AP endonuclease functions in active DNA demethylation and gene imprinting in Arabidopsis [corrected]. Plos Genetics. 11: e1004905. PMID 25569774 DOI: 10.1371/Journal.Pgen.1004905  0.74
2015 Wang P, Du Y, Hou YJ, Zhao Y, Hsu CC, Yuan F, Zhu X, Tao WA, Song CP, Zhu JK. Nitric oxide negatively regulates abscisic acid signaling in guard cells by S-nitrosylation of OST1. Proceedings of the National Academy of Sciences of the United States of America. 112: 613-8. PMID 25550508 DOI: 10.1073/Pnas.1423481112  0.639
2015 Duan CG, Zhang H, Tang K, Zhu X, Qian W, Hou YJ, Wang B, Lang Z, Zhao Y, Wang X, Wang P, Zhou J, Liang G, Liu N, Wang C, ... Zhu JK, et al. Specific but interdependent functions for Arabidopsis AGO4 and AGO6 in RNA-directed DNA methylation. The Embo Journal. 34: 581-92. PMID 25527293 DOI: 10.15252/Embj.201489453  0.809
2015 Ban T, Zhu JK, Melcher K, Xu HE. Structural mechanisms of RNA recognition: sequence-specific and non-specific RNA-binding proteins and the Cas9-RNA-DNA complex. Cellular and Molecular Life Sciences : Cmls. 72: 1045-58. PMID 25432705 DOI: 10.1007/S00018-014-1779-9  0.327
2015 Wang ZY, Gehring C, Zhu J, Li FM, Zhu JK, Xiong L. The Arabidopsis Vacuolar Sorting Receptor1 is required for osmotic stress-induced abscisic acid biosynthesis. Plant Physiology. 167: 137-52. PMID 25416474 DOI: 10.1104/Pp.114.249268  0.781
2015 Liu W, Zhu X, Lei M, Xia Q, Botella JR, Zhu J, Mao Y. A detailed procedure for CRISPR/Cas9-mediated gene editing in Arabidopsis thaliana Science Bulletin. 60: 1332-1347. DOI: 10.1007/S11434-015-0848-2  0.412
2014 Sridharamurthy M, Kovach A, Zhao Y, Zhu JK, Xu HE, Swaminathan K, Melcher K. H2O2 inhibits ABA-signaling protein phosphatase HAB1. Plos One. 9: e113643. PMID 25460914 DOI: 10.1371/Journal.Pone.0113643  0.424
2014 Han YF, Dou K, Ma ZY, Zhang SW, Huang HW, Li L, Cai T, Chen S, Zhu JK, He XJ. SUVR2 is involved in transcriptional gene silencing by associating with SNF2-related chromatin-remodeling proteins in Arabidopsis. Cell Research. 24: 1445-65. PMID 25420628 DOI: 10.1038/Cr.2014.156  0.827
2014 Zhu Y, Schluttenhoffer CM, Wang P, Fu F, Thimmapuram J, Zhu JK, Lee SY, Yun DJ, Mengiste T. CYCLIN-DEPENDENT KINASE8 differentially regulates plant immunity to fungal pathogens through kinase-dependent and -independent functions in Arabidopsis. The Plant Cell. 26: 4149-70. PMID 25281690 DOI: 10.1105/Tpc.114.128611  0.739
2014 Zhang H, Zhu JK. Emerging roles of RNA processing factors in regulating long non-coding RNAs. Rna Biology. 11: 793-7. PMID 25144332 DOI: 10.4161/Rna.29731  0.379
2014 Qian W, Miki D, Lei M, Zhu X, Zhang H, Liu Y, Li Y, Lang Z, Wang J, Tang K, Liu R, Zhu JK. Regulation of active DNA demethylation by an α-crystallin domain protein in Arabidopsis. Molecular Cell. 55: 361-71. PMID 25002145 DOI: 10.1016/J.Molcel.2014.06.008  0.805
2014 Zhang H, Tang K, Wang B, Duan CG, Lang Z, Zhu JK. Protocol: a beginner's guide to the analysis of RNA-directed DNA methylation in plants. Plant Methods. 10: 18. PMID 24955108 DOI: 10.1186/1746-4811-10-18  0.723
2014 Yamamuro C, Miki D, Zheng Z, Ma J, Wang J, Yang Z, Dong J, Zhu JK. Overproduction of stomatal lineage cells in Arabidopsis mutants defective in active DNA demethylation. Nature Communications. 5: 4062. PMID 24898766 DOI: 10.1038/Ncomms5062  0.487
2014 Zhao Y, Xing L, Wang X, Hou YJ, Gao J, Wang P, Duan CG, Zhu X, Zhu JK. The ABA receptor PYL8 promotes lateral root growth by enhancing MYB77-dependent transcription of auxin-responsive genes. Science Signaling. 7: ra53. PMID 24894996 DOI: 10.1126/Scisignal.2005051  0.794
2014 Shi H, Ye T, Zhu JK, Chan Z. Constitutive production of nitric oxide leads to enhanced drought stress resistance and extensive transcriptional reprogramming in Arabidopsis. Journal of Experimental Botany. 65: 4119-31. PMID 24868034 DOI: 10.1093/Jxb/Eru184  0.497
2014 Wang D, Qu Z, Adelson DL, Zhu JK, Timmis JN. Transcription of nuclear organellar DNA in a model plant system. Genome Biology and Evolution. 6: 1327-34. PMID 24868015 DOI: 10.1093/Gbe/Evu111  0.457
2014 Zhang H, Zhang J, Wei P, Zhang B, Gou F, Feng Z, Mao Y, Yang L, Zhang H, Xu N, Zhu JK. The CRISPR/Cas9 system produces specific and homozygous targeted gene editing in rice in one generation. Plant Biotechnology Journal. 12: 797-807. PMID 24854982 DOI: 10.1111/Pbi.12200  0.396
2014 Huang CF, Zhu JK. RNA Splicing Factors and RNA-Directed DNA Methylation. Biology. 3: 243-54. PMID 24833507 DOI: 10.3390/Biology3020243  0.76
2014 Zhang H, Tang K, Qian W, Duan CG, Wang B, Zhang H, Wang P, Zhu X, Lang Z, Yang Y, Zhu JK. An Rrp6-like protein positively regulates noncoding RNA levels and DNA methylation in Arabidopsis. Molecular Cell. 54: 418-30. PMID 24726328 DOI: 10.1016/J.Molcel.2014.03.019  0.802
2014 Khan A, Garbelli A, Grossi S, Florentin A, Batelli G, Acuna T, Zolla G, Kaye Y, Paul LK, Zhu JK, Maga G, Grafi G, Barak S. The Arabidopsis STRESS RESPONSE SUPPRESSOR DEAD-box RNA helicases are nucleolar- and chromocenter-localized proteins that undergo stress-mediated relocalization and are involved in epigenetic gene silencing. The Plant Journal : For Cell and Molecular Biology. 79: 28-43. PMID 24724701 DOI: 10.1111/Tpj.12533  0.524
2014 Feng Z, Mao Y, Xu N, Zhang B, Wei P, Yang DL, Wang Z, Zhang Z, Zheng R, Yang L, Zeng L, Liu X, Zhu JK. Multigeneration analysis reveals the inheritance, specificity, and patterns of CRISPR/Cas-induced gene modifications in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. 111: 4632-7. PMID 24550464 DOI: 10.1073/Pnas.1400822111  0.407
2014 Cao MJ, Wang Z, Zhao Q, Mao JL, Speiser A, Wirtz M, Hell R, Zhu JK, Xiang CB. Sulfate availability affects ABA levels and germination response to ABA and salt stress in Arabidopsis thaliana. The Plant Journal : For Cell and Molecular Biology. 77: 604-15. PMID 24330104 DOI: 10.1111/Tpj.12407  0.488
2014 Lei M, La H, Lu K, Wang P, Miki D, Ren Z, Duan CG, Wang X, Tang K, Zeng L, Yang L, Zhang H, Nie W, Liu P, Zhou J, ... ... Zhu JK, et al. Arabidopsis EDM2 promotes IBM1 distal polyadenylation and regulates genome DNA methylation patterns. Proceedings of the National Academy of Sciences of the United States of America. 111: 527-32. PMID 24248388 DOI: 10.1073/Pnas.1320106110  0.832
2014 Batelli G, Oh DH, D'Urzo MP, Orsini F, Dassanayake M, Zhu JK, Bohnert HJ, Bressan RA, Maggio A. Using Arabidopsis-related model species (ARMS): growth, genetic transformation, and comparative genomics. Methods in Molecular Biology (Clifton, N.J.). 1062: 27-51. PMID 24057359 DOI: 10.1007/978-1-62703-580-4_2  0.527
2014 Huang CF, Zhu JK. RNA splicing factors and RNA-directed DNA methylation Biology. 3: 243-254. DOI: 10.3390/biology3020243  0.675
2014 Van Oosten MJ, Bressan RA, Zhu JK, Bohnert HJ, Chinnusamy V. The Role of the Epigenome in Gene Expression Control and the Epimark Changes in Response to the Environment Critical Reviews in Plant Sciences. 33: 64-87. DOI: 10.1080/07352689.2014.852920  0.81
2014 Bressan RA, Zhu JK, Van Oosten MJ, Maggio A, Bohnert HJ, Chinnusamy V. Epigenetics Connects the Genome to Its Environment Plant Breeding Reviews. 38: 69-142. DOI: 10.1002/9781118916865.Ch03  0.539
2013 Zhang H, He X, Zhu JK. RNA-directed DNA methylation in plants: Where to start? Rna Biology. 10: 1593-6. PMID 25003825 DOI: 10.4161/Rna.26312  0.434
2013 Zhao Y, Chan Z, Xing L, Liu X, Hou YJ, Chinnusamy V, Wang P, Duan C, Zhu JK. The unique mode of action of a divergent member of the ABA-receptor protein family in ABA and stress signaling. Cell Research. 23: 1380-95. PMID 24189045 DOI: 10.1038/Cr.2013.149  0.654
2013 Yin P, Li Q, Yan C, Liu Y, Liu J, Yu F, Wang Z, Long J, He J, Wang HW, Wang J, Zhu JK, Shi Y, Yan N. Structural basis for the modular recognition of single-stranded RNA by PPR proteins. Nature. 504: 168-71. PMID 24162847 DOI: 10.1038/Nature12651  0.318
2013 Huang CF, Miki D, Tang K, Zhou HR, Zheng Z, Chen W, Ma ZY, Yang L, Zhang H, Liu R, He XJ, Zhu JK. A Pre-mRNA-splicing factor is required for RNA-directed DNA methylation in Arabidopsis. Plos Genetics. 9: e1003779. PMID 24068953 DOI: 10.1371/Journal.Pgen.1003779  0.824
2013 Wang X, Duan CG, Tang K, Wang B, Zhang H, Lei M, Lu K, Mangrauthia SK, Wang P, Zhu G, Zhao Y, Zhu JK. RNA-binding protein regulates plant DNA methylation by controlling mRNA processing at the intronic heterochromatin-containing gene IBM1. Proceedings of the National Academy of Sciences of the United States of America. 110: 15467-72. PMID 24003136 DOI: 10.1073/Pnas.1315399110  0.84
2013 Mao Y, Zhang H, Xu N, Zhang B, Gou F, Zhu JK. Application of the CRISPR-Cas system for efficient genome engineering in plants. Molecular Plant. 6: 2008-11. PMID 23963532 DOI: 10.1093/Mp/Sst121  0.449
2013 Feng Z, Zhang B, Ding W, Liu X, Yang DL, Wei P, Cao F, Zhu S, Zhang F, Mao Y, Zhu JK. Efficient genome editing in plants using a CRISPR/Cas system. Cell Research. 23: 1229-32. PMID 23958582 DOI: 10.1038/Cr.2013.114  0.319
2013 Bai G, Yang DH, Zhao Y, Ha S, Yang F, Ma J, Gao XS, Wang ZM, Zhu JK. Interactions between soybean ABA receptors and type 2C protein phosphatases. Plant Molecular Biology. 83: 651-64. PMID 23934343 DOI: 10.1007/S11103-013-0114-4  0.43
2013 Wang Y, Yang L, Zheng Z, Grumet R, Loescher W, Zhu JK, Yang P, Hu Y, Chan Z. Transcriptomic and physiological variations of three Arabidopsis ecotypes in response to salt stress. Plos One. 8: e69036. PMID 23894403 DOI: 10.1371/Journal.Pone.0069036  0.334
2013 Zhou HR, Zhang FF, Ma ZY, Huang HW, Jiang L, Cai T, Zhu JK, Zhang C, He XJ. Folate polyglutamylation is involved in chromatin silencing by maintaining global DNA methylation and histone H3K9 dimethylation in Arabidopsis. The Plant Cell. 25: 2545-59. PMID 23881414 DOI: 10.1105/Tpc.113.114678  0.695
2013 Dou K, Huang CF, Ma ZY, Zhang CJ, Zhou JX, Huang HW, Cai T, Tang K, Zhu JK, He XJ. The PRP6-like splicing factor STA1 is involved in RNA-directed DNA methylation by facilitating the production of Pol V-dependent scaffold RNAs. Nucleic Acids Research. 41: 8489-502. PMID 23877244 DOI: 10.1093/Nar/Gkt639  0.823
2013 Zhang H, Wang B, Duan CG, Zhu JK. Chemical probes in plant epigenetics studies. Plant Signaling & Behavior. 8. PMID 23838953 DOI: 10.4161/Psb.25364  0.735
2013 Cao M, Liu X, Zhang Y, Xue X, Zhou XE, Melcher K, Gao P, Wang F, Zeng L, Zhao Y, Zhao Y, Deng P, Zhong D, Zhu JK, Xu HE, et al. An ABA-mimicking ligand that reduces water loss and promotes drought resistance in plants. Cell Research. 23: 1043-54. PMID 23835477 DOI: 10.1038/Cr.2013.95  0.421
2013 Wang P, Xue L, Batelli G, Lee S, Hou YJ, Van Oosten MJ, Zhang H, Tao WA, Zhu JK. Quantitative phosphoproteomics identifies SnRK2 protein kinase substrates and reveals the effectors of abscisic acid action. Proceedings of the National Academy of Sciences of the United States of America. 110: 11205-10. PMID 23776212 DOI: 10.1073/Pnas.1308974110  0.806
2013 Zhu X, Zhu JK. Double repression in jasmonate-mediated plant defense. Molecular Cell. 50: 459-60. PMID 23706816 DOI: 10.1016/J.Molcel.2013.05.009  0.42
2013 Xue L, Wang P, Wang L, Renzi E, Radivojac P, Tang H, Arnold R, Zhu JK, Tao WA. Quantitative measurement of phosphoproteome response to osmotic stress in arabidopsis based on Library-Assisted eXtracted Ion Chromatogram (LAXIC). Molecular & Cellular Proteomics : McP. 12: 2354-69. PMID 23660473 DOI: 10.1074/Mcp.O113.027284  0.426
2013 Zhang H, Ma ZY, Zeng L, Tanaka K, Zhang CJ, Ma J, Bai G, Wang P, Zhang SW, Liu ZW, Cai T, Tang K, Liu R, Shi X, He XJ, ... Zhu JK, et al. DTF1 is a core component of RNA-directed DNA methylation and may assist in the recruitment of Pol IV. Proceedings of the National Academy of Sciences of the United States of America. 110: 8290-5. PMID 23637343 DOI: 10.1073/pnas.1300585110  0.826
2013 Zhang CJ, Zhou JX, Liu J, Ma ZY, Zhang SW, Dou K, Huang HW, Cai T, Liu R, Zhu JK, He XJ. The splicing machinery promotes RNA-directed DNA methylation and transcriptional silencing in Arabidopsis. The Embo Journal. 32: 1128-40. PMID 23524848 DOI: 10.1038/Emboj.2013.49  0.834
2013 Luhua S, Hegie A, Suzuki N, Shulaev E, Luo X, Cenariu D, Ma V, Kao S, Lim J, Gunay MB, Oosumi T, Lee SC, Harper J, Cushman J, Gollery M, ... ... Zhu JK, et al. Linking genes of unknown function with abiotic stress responses by high-throughput phenotype screening. Physiologia Plantarum. 148: 322-33. PMID 23517122 DOI: 10.1111/Ppl.12013  0.479
2013 Zhang X, Lii Y, Wu Z, Polishko A, Zhang H, Chinnusamy V, Lonardi S, Zhu JK, Liu R, Jin H. Mechanisms of small RNA generation from cis-NATs in response to environmental and developmental cues. Molecular Plant. 6: 704-15. PMID 23505223 DOI: 10.1093/Mp/Sst051  0.662
2013 Arisz SA, van Wijk R, Roels W, Zhu JK, Haring MA, Munnik T. Rapid phosphatidic acid accumulation in response to low temperature stress in Arabidopsis is generated through diacylglycerol kinase. Frontiers in Plant Science. 4: 1. PMID 23346092 DOI: 10.3389/Fpls.2013.00001  0.413
2013 Li L, Atef A, Piatek A, Ali Z, Piatek M, Aouida M, Sharakuu A, Mahjoub A, Wang G, Khan S, Fedoroff NV, Zhu JK, Mahfouz MM. Characterization and DNA-binding specificities of Ralstonia TAL-like effectors. Molecular Plant. 6: 1318-30. PMID 23300258 DOI: 10.1093/Mp/Sst006  0.568
2013 Ben Chaabane S, Liu R, Chinnusamy V, Kwon Y, Park JH, Kim SY, Zhu JK, Yang SW, Lee BH. STA1, an Arabidopsis pre-mRNA processing factor 6 homolog, is a new player involved in miRNA biogenesis. Nucleic Acids Research. 41: 1984-97. PMID 23268445 DOI: 10.1093/Nar/Gks1309  0.684
2012 Zhan X, Wang B, Li H, Liu R, Kalia RK, Zhu JK, Chinnusamy V. Arabidopsis proline-rich protein important for development and abiotic stress tolerance is involved in microRNA biogenesis. Proceedings of the National Academy of Sciences of the United States of America. 109: 18198-203. PMID 23071326 DOI: 10.1073/Pnas.1216199109  0.744
2012 Deng D, Yin P, Yan C, Pan X, Gong X, Qi S, Xie T, Mahfouz M, Zhu JK, Yan N, Shi Y. Recognition of methylated DNA by TAL effectors. Cell Research. 22: 1502-4. PMID 22945353 DOI: 10.1038/Cr.2012.127  0.329
2012 Zhang H, Zhu JK. Seeing the forest for the trees: a wide perspective on RNA-directed DNA methylation. Genes & Development. 26: 1769-73. PMID 22895250 DOI: 10.1101/Gad.200410.112  0.4
2012 Barrera-Figueroa BE, Gao L, Wu Z, Zhou X, Zhu J, Jin H, Liu R, Zhu JK. High throughput sequencing reveals novel and abiotic stress-regulated microRNAs in the inflorescences of rice. Bmc Plant Biology. 12: 132. PMID 22862743 DOI: 10.1186/1471-2229-12-132  0.432
2012 Batelli G, Massarelli I, Van Oosten M, Nurcato R, Vannini C, Raimondi G, Leone A, Zhu JK, Maggio A, Grillo S. Asg1 is a stress-inducible gene which increases stomatal resistance in salt stressed potato. Journal of Plant Physiology. 169: 1849-57. PMID 22854180 DOI: 10.1016/J.Jplph.2012.07.004  0.837
2012 Fujii H, Zhu JK. Osmotic stress signaling via protein kinases. Cellular and Molecular Life Sciences : Cmls. 69: 3165-73. PMID 22828864 DOI: 10.1007/S00018-012-1087-1  0.431
2012 Wu HJ, Zhang Z, Wang JY, Oh DH, Dassanayake M, Liu B, Huang Q, Sun HX, Xia R, Wu Y, Wang YN, Yang Z, Liu Y, Zhang W, Zhang H, ... ... Zhu JK, et al. Insights into salt tolerance from the genome of Thellungiella salsuginea. Proceedings of the National Academy of Sciences of the United States of America. 109: 12219-24. PMID 22778405 DOI: 10.1073/Pnas.1209954109  0.407
2012 Li X, Qian W, Zhao Y, Wang C, Shen J, Zhu JK, Gong Z. Antisilencing role of the RNA-directed DNA methylation pathway and a histone acetyltransferase in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. 109: 11425-30. PMID 22733760 DOI: 10.1073/Pnas.1208557109  0.803
2012 Qian W, Miki D, Zhang H, Liu Y, Zhang X, Tang K, Kan Y, La H, Li X, Li S, Zhu X, Shi X, Zhang K, Pontes O, Chen X, ... ... Zhu JK, et al. A histone acetyltransferase regulates active DNA demethylation in Arabidopsis. Science (New York, N.Y.). 336: 1445-8. PMID 22700931 DOI: 10.1126/Science.1219416  0.819
2012 Zhou XE, Soon FF, Ng LM, Kovach A, Suino-Powell KM, Li J, Yong EL, Zhu JK, Xu HE, Melcher K. Catalytic mechanism and kinase interactions of ABA-signaling PP2C phosphatases. Plant Signaling & Behavior. 7: 581-8. PMID 22516825 DOI: 10.4161/Psb.19694  0.415
2012 Kwon Y, Yu SI, Lee H, Yim JH, Zhu JK, Lee BH. Arabidopsis serine decarboxylase mutants implicate the roles of ethanolamine in plant growth and development. International Journal of Molecular Sciences. 13: 3176-88. PMID 22489147 DOI: 10.3390/Ijms13033176  0.792
2012 Zhang H, Deng X, Miki D, Cutler S, La H, Hou YJ, Oh J, Zhu JK. Sulfamethazine suppresses epigenetic silencing in Arabidopsis by impairing folate synthesis. The Plant Cell. 24: 1230-41. PMID 22447685 DOI: 10.1105/Tpc.112.096149  0.475
2012 Zhang X, Xia J, Lii YE, Barrera-Figueroa BE, Zhou X, Gao S, Lu L, Niu D, Chen Z, Leung C, Wong T, Zhang H, Guo J, Li Y, Liu R, ... ... Zhu JK, et al. Genome-wide analysis of plant nat-siRNAs reveals insights into their distribution, biogenesis and function. Genome Biology. 13: R20. PMID 22439910 DOI: 10.1186/Gb-2012-13-3-R20  0.395
2012 Martínez-Macías MI, Qian W, Miki D, Pontes O, Liu Y, Tang K, Liu R, Morales-Ruiz T, Ariza RR, Roldán-Arjona T, Zhu JK. A DNA 3' phosphatase functions in active DNA demethylation in Arabidopsis. Molecular Cell. 45: 357-70. PMID 22325353 DOI: 10.1016/J.Molcel.2011.11.034  0.805
2012 Li L, Piatek MJ, Atef A, Piatek A, Wibowo A, Fang X, Sabir JS, Zhu JK, Mahfouz MM. Rapid and highly efficient construction of TALE-based transcriptional regulators and nucleases for genome modification. Plant Molecular Biology. 78: 407-16. PMID 22271303 DOI: 10.1007/S11103-012-9875-4  0.569
2012 You N, Murillo G, Su X, Zeng X, Xu J, Ning K, Zhang S, Zhu J, Cui X. SNP calling using genotype model selection on high-throughput sequencing data. Bioinformatics (Oxford, England). 28: 643-50. PMID 22253293 DOI: 10.1093/Bioinformatics/Bts001  0.757
2012 Li Z, Li Z, Gao X, Chinnusamy V, Bressan R, Wang ZX, Zhu JK, Wu JW, Liu D. ROP11 GTPase negatively regulates ABA signaling by protecting ABI1 phosphatase activity from inhibition by the ABA receptor RCAR1/PYL9 in Arabidopsis. Journal of Integrative Plant Biology. 54: 180-8. PMID 22251383 DOI: 10.1111/J.1744-7909.2012.01101.X  0.738
2012 Mahfouz MM, Li L, Piatek M, Fang X, Mansour H, Bangarusamy DK, Zhu JK. Targeted transcriptional repression using a chimeric TALE-SRDX repressor protein. Plant Molecular Biology. 78: 311-21. PMID 22167390 DOI: 10.1007/S11103-011-9866-X  0.636
2012 Khraiwesh B, Zhu J, Zhu J. Role of miRNAs and siRNAs in biotic and abiotic stress responses of plants Biochimica Et Biophysica Acta. 1819: 137-148. PMID 21605713 DOI: 10.1016/J.Bbagrm.2011.05.001  0.462
2011 Liu J, Bai G, Zhang C, Chen W, Zhou J, Zhang S, Chen Q, Deng X, He XJ, Zhu JK. An atypical component of RNA-directed DNA methylation machinery has both DNA methylation-dependent and -independent roles in locus-specific transcriptional gene silencing. Cell Research. 21: 1691-700. PMID 22064704 DOI: 10.1038/Cr.2011.173  0.732
2011 Yunta C, Martínez-Ripoll M, Zhu JK, Albert A. The structure of Arabidopsis thaliana OST1 provides insights into the kinase regulation mechanism in response to osmotic stress. Journal of Molecular Biology. 414: 135-44. PMID 21983340 DOI: 10.1016/J.Jmb.2011.09.041  0.377
2011 Barrera-Figueroa BE, Gao L, Diop NN, Wu Z, Ehlers JD, Roberts PA, Close TJ, Zhu JK, Liu R. Identification and comparative analysis of drought-associated microRNAs in two cowpea genotypes. Bmc Plant Biology. 11: 127. PMID 21923928 DOI: 10.1186/1471-2229-11-127  0.32
2011 La H, Ding B, Mishra GP, Zhou B, Yang H, Bellizzi Mdel R, Chen S, Meyers BC, Peng Z, Zhu JK, Wang GL. A 5-methylcytosine DNA glycosylase/lyase demethylates the retrotransposon Tos17 and promotes its transposition in rice. Proceedings of the National Academy of Sciences of the United States of America. 108: 15498-503. PMID 21896764 DOI: 10.1073/Pnas.1112704108  0.476
2011 Gong Z, Zhu JK. Active DNA demethylation by oxidation and repair Cell Research. 21: 1649-1651. PMID 21862972 DOI: 10.1038/Cr.2011.140  0.67
2011 Dassanayake M, Oh DH, Haas JS, Hernandez A, Hong H, Ali S, Yun DJ, Bressan RA, Zhu JK, Bohnert HJ, Cheeseman JM. The genome of the extremophile crucifer Thellungiella parvula. Nature Genetics. 43: 913-8. PMID 21822265 DOI: 10.1038/Ng.889  0.517
2011 Jiang C, Mithani A, Gan X, Belfield EJ, Klingler JP, Zhu JK, Ragoussis J, Mott R, Harberd NP. Regenerant Arabidopsis lineages display a distinct genome-wide spectrum of mutations conferring variant phenotypes. Current Biology : Cb. 21: 1385-90. PMID 21802297 DOI: 10.1016/J.Cub.2011.07.002  0.392
2011 Wang ZY, Xiong L, Li W, Zhu JK, Zhu J. The plant cuticle is required for osmotic stress regulation of abscisic acid biosynthesis and osmotic stress tolerance in Arabidopsis. The Plant Cell. 23: 1971-84. PMID 21610183 DOI: 10.1105/Tpc.110.081943  0.792
2011 Bennetzen JL, Zhu JK. Epigenetics of the epigenome. Current Opinion in Plant Biology. 14: 113-5. PMID 21489862 DOI: 10.1016/J.Pbi.2011.03.015  0.302
2011 Zhang H, Zhu JK. RNA-directed DNA methylation. Current Opinion in Plant Biology. 14: 142-7. PMID 21420348 DOI: 10.1016/J.Pbi.2011.02.003  0.425
2011 Zhao M, Ding H, Zhu JK, Zhang F, Li WX. Involvement of miR169 in the nitrogen-starvation responses in Arabidopsis. The New Phytologist. 190: 906-15. PMID 21348874 DOI: 10.1111/J.1469-8137.2011.03647.X  0.358
2011 He XJ, Chen T, Zhu JK. Regulation and function of DNA methylation in plants and animals. Cell Research. 21: 442-65. PMID 21321601 DOI: 10.1038/cr.2011.23  0.671
2011 Mahfouz MM, Li L, Shamimuzzaman M, Wibowo A, Fang X, Zhu JK. De novo-engineered transcription activator-like effector (TALE) hybrid nuclease with novel DNA binding specificity creates double-strand breaks. Proceedings of the National Academy of Sciences of the United States of America. 108: 2623-8. PMID 21262818 DOI: 10.1073/Pnas.1019533108  0.572
2011 Quintero FJ, Martinez-Atienza J, Villalta I, Jiang X, Kim WY, Ali Z, Fujii H, Mendoza I, Yun DJ, Zhu JK, Pardo JM. Activation of the plasma membrane Na/H antiporter Salt-Overly-Sensitive 1 (SOS1) by phosphorylation of an auto-inhibitory C-terminal domain. Proceedings of the National Academy of Sciences of the United States of America. 108: 2611-6. PMID 21262798 DOI: 10.1073/Pnas.1018921108  0.333
2011 Fujii H, Verslues PE, Zhu JK. Arabidopsis decuple mutant reveals the importance of SnRK2 kinases in osmotic stress responses in vivo. Proceedings of the National Academy of Sciences of the United States of America. 108: 1717-22. PMID 21220313 DOI: 10.1073/Pnas.1018367108  0.454
2011 Yunta C, Martínez-Ripoll M, Zhu J-, Albert A. OST1 structure provides the basis of regulation in response to stress in plants Acta Crystallographica Section a Foundations of Crystallography. 67: C342-C342. DOI: 10.1107/S0108767311091422  0.352
2010 Oh DH, Dassanayake M, Haas JS, Kropornika A, Wright C, d'Urzo MP, Hong H, Ali S, Hernandez A, Lambert GM, Inan G, Galbraith DW, Bressan RA, Yun DJ, Zhu JK, et al. Genome structures and halophyte-specific gene expression of the extremophile Thellungiella parvula in comparison with Thellungiella salsuginea (Thellungiella halophila) and Arabidopsis. Plant Physiology. 154: 1040-52. PMID 20833729 DOI: 10.1104/Pp.110.163923  0.778
2010 Melcher K, Xu Y, Ng LM, Zhou XE, Soon FF, Chinnusamy V, Suino-Powell KM, Kovach A, Tham FS, Cutler SR, Li J, Yong EL, Zhu JK, Xu HE. Identification and mechanism of ABA receptor antagonism. Nature Structural & Molecular Biology. 17: 1102-8. PMID 20729862 DOI: 10.1038/Nsmb.1887  0.577
2010 Liu Q, Wang J, Miki D, Xia R, Yu W, He J, Zheng Z, Zhu JK, Gong Z. DNA replication factor C1 mediates genomic stability and transcriptional gene silencing in Arabidopsis. The Plant Cell. 22: 2336-52. PMID 20639449 DOI: 10.1105/Tpc.110.076349  0.676
2010 Zhu J, Verslues PE, Zheng X, Lee BH, Zhan X, Manabe Y, Sokolchik I, Zhu Y, Dong CH, Zhu JK, Hasegawa PM, Bressan RA. Retraction for Zhu et al., HOS10 encodes an R2R3-type MYB transcription factor essential for cold acclimation in plants. Proceedings of the National Academy of Sciences of the United States of America. 107: 13972. PMID 20622156 DOI: 10.1073/Pnas.1009100107  0.794
2010 Klingler JP, Batelli G, Zhu JK. ABA receptors: the START of a new paradigm in phytohormone signalling. Journal of Experimental Botany. 61: 3199-210. PMID 20522527 DOI: 10.1093/Jxb/Erq151  0.409
2010 Ren X, Chen Z, Liu Y, Zhang H, Zhang M, Liu Q, Hong X, Zhu JK, Gong Z. ABO3, a WRKY transcription factor, mediates plant responses to abscisic acid and drought tolerance in Arabidopsis. The Plant Journal : For Cell and Molecular Biology. 63: 417-29. PMID 20487379 DOI: 10.1111/J.1365-313X.2010.04248.X  0.724
2010 Jin H, Zhu JK. A viral suppressor protein inhibits host RNA silencing by hooking up with Argonautes. Genes & Development. 24: 853-6. PMID 20439425 DOI: 10.1101/Gad.1927310  0.353
2010 Gao Z, Liu HL, Daxinger L, Pontes O, He X, Qian W, Lin H, Xie M, Lorkovic ZJ, Zhang S, Miki D, Zhan X, Pontier D, Lagrange T, Jin H, ... ... Zhu JK, et al. An RNA polymerase II- and AGO4-associated protein acts in RNA-directed DNA methylation. Nature. 465: 106-9. PMID 20410883 DOI: 10.1038/Nature09025  0.82
2010 Law JA, Ausin I, Johnson LM, Vashisht AA, Zhu JK, Wohlschlegel JA, Jacobsen SE. A protein complex required for polymerase V transcripts and RNA- directed DNA methylation in Arabidopsis. Current Biology : Cb. 20: 951-6. PMID 20409711 DOI: 10.1016/J.Cub.2010.03.062  0.434
2010 Zhu J, Lee BH, Dellinger M, Cui X, Zhang C, Wu S, Nothnagel EA, Zhu JK. A cellulose synthase-like protein is required for osmotic stress tolerance in Arabidopsis. The Plant Journal : For Cell and Molecular Biology. 63: 128-40. PMID 20409003 DOI: 10.1111/J.1365-313X.2010.04227.X  0.81
2010 Chinnusamy V, Zhu JK, Sunkar R. Gene regulation during cold stress acclimation in plants. Methods in Molecular Biology (Clifton, N.J.). 639: 39-55. PMID 20387039 DOI: 10.1007/978-1-60761-702-0_3  0.819
2010 Lee BH, Zhu JK. Phenotypic analysis of Arabidopsis mutants: germination rate under salt/hormone-induced stress. Cold Spring Harbor Protocols. 2010: pdb.prot4969. PMID 20360355 DOI: 10.1101/Pdb.Prot4969  0.693
2010 Yao Y, Ni Z, Peng H, Sun F, Xin M, Sunkar R, Zhu JK, Sun Q. Non-coding small RNAs responsive to abiotic stress in wheat (Triticum aestivum L.). Functional & Integrative Genomics. 10: 187-90. PMID 20217168 DOI: 10.1007/S10142-010-0163-6  0.655
2010 Ren Z, Zheng Z, Chinnusamy V, Zhu J, Cui X, Iida K, Zhu JK. RAS1, a quantitative trait locus for salt tolerance and ABA sensitivity in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. 107: 5669-74. PMID 20212128 DOI: 10.1073/Pnas.0910798107  0.679
2010 Lee BH, Zhu JK. Phenotypic analysis of Arabidopsis mutants: electrolyte leakage after freezing stress. Cold Spring Harbor Protocols. 2010: pdb.prot4970. PMID 20150108 DOI: 10.1101/Pdb.Prot4970  0.658
2010 Zheng Z, Xing Y, He XJ, Li W, Hu Y, Yadav SK, Oh J, Zhu JK. An SGS3-like protein functions in RNA-directed DNA methylation and transcriptional gene silencing in Arabidopsis. The Plant Journal : For Cell and Molecular Biology. 62: 92-9. PMID 20059743 DOI: 10.1111/J.1365-313X.2010.04130.X  0.725
2010 Zhu JK, Bressan RA, Hasegawa PM. An Atriplex nummularia cDNA with Sequence Relatedness to the Algal Caltractin Gene. Plant Physiology. 99: 1734-5. PMID 16669106 DOI: 10.1104/Pp.99.4.1734  0.633
2010 Lee BH, Zhu JK. Phenotypic analysis of arabidopsis mutants: Electrolyte leakage after freezing stress Cold Spring Harbor Protocols. 5. DOI: 10.1101/pdb.prot4970  0.366
2009 Lee BH, Zhu JK. Phenotypic analysis of Arabidopsis mutants: root elongation under salt/hormone-induced stress. Cold Spring Harbor Protocols. 2009: pdb.prot4968. PMID 20150051 DOI: 10.1101/Pdb.Prot4968  0.698
2009 Fujii H, Chinnusamy V, Rodrigues A, Rubio S, Antoni R, Park SY, Cutler SR, Sheen J, Rodriguez PL, Zhu JK. In vitro reconstitution of an abscisic acid signalling pathway. Nature. 462: 660-4. PMID 19924127 DOI: 10.1038/Nature08599  0.682
2009 He XJ, Hsu YF, Zhu S, Liu HL, Pontes O, Zhu J, Cui X, Wang CS, Zhu JK. A conserved transcriptional regulator is required for RNA-directed DNA methylation and plant development. Genes & Development. 23: 2717-22. PMID 19903758 DOI: 10.1101/Gad.1851809  0.718
2009 Melcher K, Ng LM, Zhou XE, Soon FF, Xu Y, Suino-Powell KM, Park SY, Weiner JJ, Fujii H, Chinnusamy V, Kovach A, Li J, Wang Y, Li J, Peterson FC, ... ... Zhu JK, et al. A gate-latch-lock mechanism for hormone signalling by abscisic acid receptors. Nature. 462: 602-8. PMID 19898420 DOI: 10.1038/Nature08613  0.632
2009 Zhu JK. Active DNA demethylation mediated by DNA glycosylases. Annual Review of Genetics. 43: 143-66. PMID 19659441 DOI: 10.1146/Annurev-Genet-102108-134205  0.39
2009 Dong CH, Zolman BK, Bartel B, Lee BH, Stevenson B, Agarwal M, Zhu JK. Disruption of Arabidopsis CHY1 reveals an important role of metabolic status in plant cold stress signaling. Molecular Plant. 2: 59-72. PMID 19529827 DOI: 10.1093/Mp/Ssn063  0.711
2009 Yang Q, Chen ZZ, Zhou XF, Yin HB, Li X, Xin XF, Hong XH, Zhu JK, Gong Z. Overexpression of SOS (Salt Overly Sensitive) genes increases salt tolerance in transgenic Arabidopsis. Molecular Plant. 2: 22-31. PMID 19529826 DOI: 10.1093/Mp/Ssn058  0.681
2009 Bressan R, Bohnert H, Zhu JK. Abiotic stress tolerance: from gene discovery in model organisms to crop improvement. Molecular Plant. 2: 1-2. PMID 19529825 DOI: 10.1093/Mp/Ssn097  0.591
2009 Fujii H, Zhu J. An autophosphorylation site of the protein kinase SOS2 is important for salt tolerance in Arabidopsis. Molecular Plant. 2: 183-190. PMID 19529820 DOI: 10.1093/Mp/Ssn087  0.386
2009 Fujii H, Zhu JK. Arabidopsis mutant deficient in 3 abscisic acid-activated protein kinases reveals critical roles in growth, reproduction, and stress. Proceedings of the National Academy of Sciences of the United States of America. 106: 8380-5. PMID 19420218 DOI: 10.1073/Pnas.0903144106  0.472
2009 He XJ, Hsu YF, Zhu S, Wierzbicki AT, Pontes O, Pikaard CS, Liu HL, Wang CS, Jin H, Zhu JK. An effector of RNA-directed DNA methylation in arabidopsis is an ARGONAUTE 4- and RNA-binding protein. Cell. 137: 498-508. PMID 19410546 DOI: 10.1016/J.Cell.2009.04.028  0.673
2009 Park SY, Fung P, Nishimura N, Jensen DR, Fujii H, Zhao Y, Lumba S, Santiago J, Rodrigues A, Chow TF, Alfred SE, Bonetta D, Finkelstein R, Provart NJ, Desveaux D, ... ... Zhu JK, et al. Abscisic acid inhibits type 2C protein phosphatases via the PYR/PYL family of START proteins. Science (New York, N.Y.). 324: 1068-71. PMID 19407142 DOI: 10.1126/Science.1173041  0.327
2009 Chinnusamy V, Zhu JK. RNA-directed DNA methylation and demethylation in plants. Science in China. Series C, Life Sciences. 52: 331-43. PMID 19381459 DOI: 10.1007/S11427-009-0052-1  0.703
2009 Iida K, Jin H, Zhu JK. Bioinformatics analysis suggests base modifications of tRNAs and miRNAs in Arabidopsis thaliana. Bmc Genomics. 10: 155. PMID 19358740 DOI: 10.1186/1471-2164-10-155  0.306
2009 Bertorello AM, Zhu JK. SIK1/SOS2 networks: decoding sodium signals via calcium-responsive protein kinase pathways. Pflugers Archiv : European Journal of Physiology. 458: 613-9. PMID 19247687 DOI: 10.1007/S00424-009-0646-2  0.361
2009 He XJ, Hsu YF, Pontes O, Zhu J, Lu J, Bressan RA, Pikaard C, Wang CS, Zhu JK. NRPD4, a protein related to the RPB4 subunit of RNA polymerase II, is a component of RNA polymerases IV and V and is required for RNA-directed DNA methylation. Genes & Development. 23: 318-30. PMID 19204117 DOI: 10.1101/Gad.1765209  0.763
2009 Chinnusamy V, Zhu JK. Epigenetic regulation of stress responses in plants. Current Opinion in Plant Biology. 12: 133-9. PMID 19179104 DOI: 10.1016/J.Pbi.2008.12.006  0.713
2009 Zhou X, Sunkar R, Jin H, Zhu JK, Zhang W. Genome-wide identification and analysis of small RNAs originated from natural antisense transcripts in Oryza sativa. Genome Research. 19: 70-8. PMID 18971307 DOI: 10.1101/Gr.084806.108  0.65
2008 Meyers BC, Axtell MJ, Bartel B, Bartel DP, Baulcombe D, Bowman JL, Cao X, Carrington JC, Chen X, Green PJ, Griffiths-Jones S, Jacobsen SE, Mallory AC, Martienssen RA, Poethig RS, ... ... Zhu JK, et al. Criteria for annotation of plant MicroRNAs. The Plant Cell. 20: 3186-90. PMID 19074682 DOI: 10.1105/Tpc.108.064311  0.364
2008 Chinnusamy V, Gong Z, Zhu JK. Abscisic acid-mediated epigenetic processes in plant development and stress responses. Journal of Integrative Plant Biology. 50: 1187-95. PMID 19017106 DOI: 10.1111/J.1744-7909.2008.00727.X  0.804
2008 Zheng X, Pontes O, Zhu J, Miki D, Zhang F, Li WX, Iida K, Kapoor A, Pikaard CS, Zhu JK. ROS3 is an RNA-binding protein required for DNA demethylation in Arabidopsis. Nature. 455: 1259-62. PMID 18815596 DOI: 10.1038/Nature07305  0.471
2008 Li WX, Oono Y, Zhu J, He XJ, Wu JM, Iida K, Lu XY, Cui X, Jin H, Zhu JK. The Arabidopsis NFYA5 transcription factor is regulated transcriptionally and posttranscriptionally to promote drought resistance. The Plant Cell. 20: 2238-51. PMID 18682547 DOI: 10.1105/Tpc.108.059444  0.717
2008 Du J, Huang YP, Xi J, Cao MJ, Ni WS, Chen X, Zhu JK, Oliver DJ, Xiang CB. Functional gene-mining for salt-tolerance genes with the power of Arabidopsis. The Plant Journal : For Cell and Molecular Biology. 56: 653-64. PMID 18643972 DOI: 10.1111/J.1365-313X.2008.03602.X  0.425
2008 Kanaoka MM, Pillitteri LJ, Fujii H, Yoshida Y, Bogenschutz NL, Takabayashi J, Zhu JK, Torii KU. SCREAM/ICE1 and SCREAM2 specify three cell-state transitional steps leading to arabidopsis stomatal differentiation. The Plant Cell. 20: 1775-85. PMID 18641265 DOI: 10.1105/Tpc.108.060848  0.399
2008 Zhang H, Ohyama K, Boudet J, Chen Z, Yang J, Zhang M, Muranaka T, Maurel C, Zhu JK, Gong Z. Dolichol biosynthesis and its effects on the unfolded protein response and abiotic stress resistance in Arabidopsis. The Plant Cell. 20: 1879-98. PMID 18612099 DOI: 10.1105/Tpc.108.061150  0.705
2008 Zhou X, Wang G, Sutoh K, Zhu JK, Zhang W. Identification of cold-inducible microRNAs in plants by transcriptome analysis. Biochimica Et Biophysica Acta. 1779: 780-8. PMID 18471443 DOI: 10.1016/J.Bbagrm.2008.04.005  0.476
2008 Zhu JK. Epigenome sequencing comes of age. Cell. 133: 395-7. PMID 18455978 DOI: 10.1016/J.Cell.2008.04.016  0.354
2008 Yu H, Chen X, Hong YY, Wang Y, Xu P, Ke SD, Liu HY, Zhu JK, Oliver DJ, Xiang CB. Activated expression of an Arabidopsis HD-START protein confers drought tolerance with improved root system and reduced stomatal density. The Plant Cell. 20: 1134-51. PMID 18451323 DOI: 10.1105/Tpc.108.058263  0.497
2008 Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O. Novel and nodulation-regulated microRNAs in soybean roots. Bmc Genomics. 9: 160. PMID 18402695 DOI: 10.1186/1471-2164-9-160  0.652
2008 Zhu J, Jeong JC, Zhu Y, Sokolchik I, Miyazaki S, Zhu JK, Hasegawa PM, Bohnert HJ, Shi H, Yun DJ, Bressan RA. Involvement of Arabidopsis HOS15 in histone deacetylation and cold tolerance. Proceedings of the National Academy of Sciences of the United States of America. 105: 4945-50. PMID 18356294 DOI: 10.1073/Pnas.0801029105  0.729
2008 Horan K, Jang C, Bailey-Serres J, Mittler R, Shelton C, Harper JF, Zhu JK, Cushman JC, Gollery M, Girke T. Annotating genes of known and unknown function by large-scale coexpression analysis. Plant Physiology. 147: 41-57. PMID 18354039 DOI: 10.1104/Pp.108.117366  0.403
2008 Sunkar R, Zhou X, Zheng Y, Zhang W, Zhu JK. Identification of novel and candidate miRNAs in rice by high throughput sequencing. Bmc Plant Biology. 8: 25. PMID 18312648 DOI: 10.1186/1471-2229-8-25  0.645
2008 Jin H, Vacic V, Girke T, Lonardi S, Zhu JK. Small RNAs and the regulation of cis-natural antisense transcripts in Arabidopsis. Bmc Molecular Biology. 9: 6. PMID 18194570 DOI: 10.1186/1471-2199-9-6  0.382
2008 Chung JS, Zhu JK, Bressan RA, Hasegawa PM, Shi H. Reactive oxygen species mediate Na+-induced SOS1 mRNA stability in Arabidopsis. The Plant Journal : For Cell and Molecular Biology. 53: 554-65. PMID 17996020 DOI: 10.1111/J.1365-313X.2007.03364.X  0.672
2007 Zhang K, Sridhar VV, Zhu J, Kapoor A, Zhu JK. Distinctive core histone post-translational modification patterns in Arabidopsis thaliana. Plos One. 2: e1210. PMID 18030344 DOI: 10.1371/Journal.Pone.0001210  0.399
2007 Batelli G, Verslues PE, Agius F, Qiu Q, Fujii H, Pan S, Schumaker KS, Grillo S, Zhu JK. SOS2 promotes salt tolerance in part by interacting with the vacuolar H+-ATPase and upregulating its transport activity Molecular and Cellular Biology. 27: 7781-7790. PMID 17875927 DOI: 10.1128/Mcb.00430-07  0.351
2007 Verslues PE, Zhu JK. New developments in abscisic acid perception and metabolism. Current Opinion in Plant Biology. 10: 447-52. PMID 17875396 DOI: 10.1016/J.Pbi.2007.08.004  0.306
2007 Chinnusamy V, Zhu J, Zhu JK. Cold stress regulation of gene expression in plants. Trends in Plant Science. 12: 444-51. PMID 17855156 DOI: 10.1016/J.Tplants.2007.07.002  0.72
2007 Verslues PE, Batelli G, Grillo S, Agius F, Kim YS, Zhu J, Agarwal M, Katiyar-Agarwal S, Zhu JK. Interaction of SOS2 with nucleoside diphosphate kinase 2 and catalases reveals a point of connection between salt stress and H2O2 signaling in Arabidopsis thaliana. Molecular and Cellular Biology. 27: 7771-80. PMID 17785451 DOI: 10.1128/Mcb.00429-07  0.406
2007 Sunkar R, Chinnusamy V, Zhu J, Zhu JK. Small RNAs as big players in plant abiotic stress responses and nutrient deprivation. Trends in Plant Science. 12: 301-9. PMID 17573231 DOI: 10.1016/J.Tplants.2007.05.001  0.786
2007 Sridhar VV, Kapoor A, Zhang K, Zhu J, Zhou T, Hasegawa PM, Bressan RA, Zhu JK. Control of DNA methylation and heterochromatic silencing by histone H2B deubiquitination. Nature. 447: 735-8. PMID 17554311 DOI: 10.1038/Nature05864  0.686
2007 Yao Y, Guo G, Ni Z, Sunkar R, Du J, Zhu JK, Sun Q. Cloning and characterization of microRNAs from wheat (Triticum aestivum L.). Genome Biology. 8: R96. PMID 17543110 DOI: 10.1186/Gb-2007-8-6-R96  0.622
2007 Sánchez-Barrena MJ, Fujii H, Angulo I, Martínez-Ripoll M, Zhu JK, Albert A. The structure of the C-terminal domain of the protein kinase AtSOS2 bound to the calcium sensor AtSOS3. Molecular Cell. 26: 427-35. PMID 17499048 DOI: 10.1016/J.Molcel.2007.04.013  0.306
2007 Zhu J, Fu X, Koo YD, Zhu JK, Jenney FE, Adams MW, Zhu Y, Shi H, Yun DJ, Hasegawa PM, Bressan RA. An enhancer mutant of Arabidopsis salt overly sensitive 3 mediates both ion homeostasis and the oxidative stress response. Molecular and Cellular Biology. 27: 5214-24. PMID 17485445 DOI: 10.1128/Mcb.01989-06  0.708
2007 Zhu J, Dong CH, Zhu JK. Interplay between cold-responsive gene regulation, metabolism and RNA processing during plant cold acclimation. Current Opinion in Plant Biology. 10: 290-5. PMID 17468037 DOI: 10.1016/J.Pbi.2007.04.010  0.527
2007 Zheng X, Zhu J, Kapoor A, Zhu JK. Role of Arabidopsis AGO6 in siRNA accumulation, DNA methylation and transcriptional gene silencing. The Embo Journal. 26: 1691-701. PMID 17332757 DOI: 10.1038/Sj.Emboj.7601603  0.508
2007 Verslues PE, Kim YS, Zhu JK. Altered ABA, proline and hydrogen peroxide in an Arabidopsis glutamate:glyoxylate aminotransferase mutant. Plant Molecular Biology. 64: 205-17. PMID 17318317 DOI: 10.1007/S11103-007-9145-Z  0.455
2007 Fujii H, Verslues PE, Zhu JK. Identification of two protein kinases required for abscisic acid regulation of seed germination, root growth, and gene expression in Arabidopsis. The Plant Cell. 19: 485-94. PMID 17307925 DOI: 10.1105/Tpc.106.048538  0.452
2007 Zhu J, Kapoor A, Sridhar VV, Agius F, Zhu JK. The DNA glycosylase/lyase ROS1 functions in pruning DNA methylation patterns in Arabidopsis. Current Biology : Cb. 17: 54-9. PMID 17208187 DOI: 10.1016/J.Cub.2006.10.059  0.412
2007 Wang Y, Liu J, Xia R, Wang J, Shen J, Cao R, Hong X, Zhu JK, Gong Z. The protein kinase TOUSLED is required for maintenance of transcriptional gene silencing in Arabidopsis. Embo Reports. 8: 77-83. PMID 17110953 DOI: 10.1038/Sj.Embor.7400852  0.708
2007 Sunkar R, Zhu JK. Micro RNAs and short-interfering RNAs in plants Journal of Integrative Plant Biology. 49: 817-826. DOI: 10.1111/J.1744-7909.2007.00499.X  0.695
2006 Martínez-Atienza J, Jiang X, Garciadeblas B, Mendoza I, Zhu JK, Pardo JM, Quintero FJ. Conservation of the salt overly sensitive pathway in rice. Plant Physiology. 143: 1001-12. PMID 17142477 DOI: 10.1104/Pp.106.092635  0.368
2006 Carpaneto A, Ivashikina N, Levchenko V, Krol E, Jeworutzki E, Zhu JK, Hedrich R. Cold transiently activates calcium-permeable channels in Arabidopsis mesophyll cells. Plant Physiology. 143: 487-94. PMID 17114272 DOI: 10.1104/Pp.106.090928  0.301
2006 Mittler R, Kim Y, Song L, Coutu J, Coutu A, Ciftci-Yilmaz S, Lee H, Stevenson B, Zhu JK. Gain- and loss-of-function mutations in Zat10 enhance the tolerance of plants to abiotic stress. Febs Letters. 580: 6537-42. PMID 17112521 DOI: 10.1016/J.Febslet.2006.11.002  0.726
2006 Katiyar-Agarwal S, Morgan R, Dahlbeck D, Borsani O, Villegas A, Zhu JK, Staskawicz BJ, Jin H. A pathogen-inducible endogenous siRNA in plant immunity. Proceedings of the National Academy of Sciences of the United States of America. 103: 18002-7. PMID 17071740 DOI: 10.1073/Pnas.0608258103  0.394
2006 Dong CH, Hu X, Tang W, Zheng X, Kim YS, Lee BH, Zhu JK. A putative Arabidopsis nucleoporin, AtNUP160, is critical for RNA export and required for plant tolerance to cold stress. Molecular and Cellular Biology. 26: 9533-43. PMID 17030626 DOI: 10.1128/Mcb.01063-06  0.74
2006 Katiyar-Agarwal S, Zhu J, Kim K, Agarwal M, Fu X, Huang A, Zhu JK. The plasma membrane Na+/H+ antiporter SOS1 interacts with RCD1 and functions in oxidative stress tolerance in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. 103: 18816-21. PMID 17023541 DOI: 10.1073/Pnas.0604711103  0.42
2006 Agarwal M, Hao Y, Kapoor A, Dong CH, Fujii H, Zheng X, Zhu JK. A R2R3 type MYB transcription factor is involved in the cold regulation of CBF genes and in acquired freezing tolerance. The Journal of Biological Chemistry. 281: 37636-45. PMID 17015446 DOI: 10.1074/Jbc.M605895200  0.395
2006 Chen Z, Zhang H, Jablonowski D, Zhou X, Ren X, Hong X, Schaffrath R, Zhu JK, Gong Z. Mutations in ABO1/ELO2, a subunit of holo-Elongator, increase abscisic acid sensitivity and drought tolerance in Arabidopsis thaliana. Molecular and Cellular Biology. 26: 6902-12. PMID 16943431 DOI: 10.1128/Mcb.00433-06  0.707
2006 Verslues PE, Guo Y, Dong CH, Ma W, Zhu JK. Mutation of SAD2, an importin beta-domain protein in Arabidopsis, alters abscisic acid sensitivity. The Plant Journal : For Cell and Molecular Biology. 47: 776-87. PMID 16889648 DOI: 10.1111/J.1365-313X.2006.02833.X  0.484
2006 Agius F, Kapoor A, Zhu JK. Role of the Arabidopsis DNA glycosylase/lyase ROS1 in active DNA demethylation. Proceedings of the National Academy of Sciences of the United States of America. 103: 11796-801. PMID 16864782 DOI: 10.1073/Pnas.0603563103  0.319
2006 Shoji T, Suzuki K, Abe T, Kaneko Y, Shi H, Zhu JK, Rus A, Hasegawa PM, Hashimoto T. Salt stress affects cortical microtubule organization and helical growth in Arabidopsis. Plant & Cell Physiology. 47: 1158-68. PMID 16861712 DOI: 10.1093/Pcp/Pcj090  0.544
2006 Sunkar R, Kapoor A, Zhu JK. Posttranscriptional induction of two Cu/Zn superoxide dismutase genes in Arabidopsis is mediated by downregulation of miR398 and important for oxidative stress tolerance. The Plant Cell. 18: 2051-65. PMID 16861386 DOI: 10.1105/Tpc.106.041673  0.62
2006 Maggio A, Zhu JK, Hasegawa PM, Bressan RA. Osmogenetics: Aristotle to Arabidopsis. The Plant Cell. 18: 1542-57. PMID 16809814 DOI: 10.1105/Tpc.105.040501  0.597
2006 Platten JD, Cotsaftis O, Berthomieu P, Bohnert H, Davenport RJ, Fairbairn DJ, Horie T, Leigh RA, Lin HX, Luan S, Mäser P, Pantoja O, Rodríguez-Navarro A, Schachtman DP, Schroeder JI, ... ... Zhu JK, et al. Nomenclature for HKT transporters, key determinants of plant salinity tolerance. Trends in Plant Science. 11: 372-4. PMID 16809061 DOI: 10.1016/J.Tplants.2006.06.001  0.362
2006 Lee BH, Kapoor A, Zhu J, Zhu JK. STABILIZED1, a stress-upregulated nuclear protein, is required for pre-mRNA splicing, mRNA turnover, and stress tolerance in Arabidopsis. The Plant Cell. 18: 1736-49. PMID 16751345 DOI: 10.1105/Tpc.106.042184  0.715
2006 Dong CH, Agarwal M, Zhang Y, Xie Q, Zhu JK. The negative regulator of plant cold responses, HOS1, is a RING E3 ligase that mediates the ubiquitination and degradation of ICE1. Proceedings of the National Academy of Sciences of the United States of America. 103: 8281-6. PMID 16702557 DOI: 10.1073/Pnas.0602874103  0.53
2006 Verslues PE, Agarwal M, Katiyar-Agarwal S, Zhu J, Zhu JK. Methods and concepts in quantifying resistance to drought, salt and freezing, abiotic stresses that affect plant water status. The Plant Journal : For Cell and Molecular Biology. 45: 523-39. PMID 16441347 DOI: 10.1111/J.1365-313X.2005.02593.X  0.366
2006 Chinnusamy V, Zhu J, Zhu JK. Salt stress signaling and mechanisms of plant salt tolerance. Genetic Engineering. 27: 141-77. PMID 16382876 DOI: 10.1007/0-387-25856-6_9  0.684
2006 Xia R, Wang J, Liu C, Wang Y, Wang Y, Zhai J, Liu J, Hong X, Cao X, Zhu JK, Gong Z. ROR1/RPA2A, a putative replication protein A2, functions in epigenetic gene silencing and in regulation of meristem development in Arabidopsis. The Plant Cell. 18: 85-103. PMID 16326925 DOI: 10.1105/Tpc.105.037507  0.701
2006 Chinnusamy V, Zhu J, Zhu J. Gene regulation during cold acclimation in plants Physiologia Plantarum. 126: 52-61. DOI: 10.1111/J.1399-3054.2006.00596.X  0.499
2006 Ohta M, Schumaker KS, Zhu JK. Mechanisms underlying plant tolerance to abiotic stresses Multigenic and Induced Systemic Resistance in Plants. 360-385. DOI: 10.1007/0-387-23266-4_16  0.303
2005 Borsani O, Zhu J, Verslues PE, Sunkar R, Zhu JK. Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulate salt tolerance in Arabidopsis. Cell. 123: 1279-91. PMID 16377568 DOI: 10.1016/J.Cell.2005.11.035  0.695
2005 Fujii H, Chiou TJ, Lin SI, Aung K, Zhu JK. A miRNA involved in phosphate-starvation response in Arabidopsis. Current Biology : Cb. 15: 2038-43. PMID 16303564 DOI: 10.1016/J.Cub.2005.10.016  0.376
2005 Kapoor A, Agarwal M, Andreucci A, Zheng X, Gong Z, Hasegawa PM, Bressan RA, Zhu JK. Mutations in a conserved replication protein suppress transcriptional gene silencing in a DNA-methylation-independent manner in Arabidopsis. Current Biology : Cb. 15: 1912-8. PMID 16271867 DOI: 10.1016/J.Cub.2005.09.013  0.783
2005 Lee BH, Henderson DA, Zhu JK. The Arabidopsis cold-responsive transcriptome and its regulation by ICE1. The Plant Cell. 17: 3155-75. PMID 16214899 DOI: 10.1105/Tpc.105.035568  0.717
2005 Sunkar R, Girke T, Zhu JK. Identification and characterization of endogenous small interfering RNAs from rice. Nucleic Acids Research. 33: 4443-54. PMID 16077027 DOI: 10.1093/Nar/Gki758  0.666
2005 Chen Z, Hong X, Zhang H, Wang Y, Li X, Zhu JK, Gong Z. Disruption of the cellulose synthase gene, AtCesA8/IRX1, enhances drought and osmotic stress tolerance in Arabidopsis. The Plant Journal : For Cell and Molecular Biology. 43: 273-83. PMID 15998313 DOI: 10.1111/J.1365-313X.2005.02452.X  0.704
2005 Song CP, Agarwal M, Ohta M, Guo Y, Halfter U, Wang P, Zhu JK. Role of an Arabidopsis AP2/EREBP-type transcriptional repressor in abscisic acid and drought stress responses. The Plant Cell. 17: 2384-96. PMID 15994908 DOI: 10.1105/Tpc.105.033043  0.71
2005 Zhu J, Verslues PE, Zheng X, Lee BH, Zhan X, Manabe Y, Sokolchik I, Zhu Y, Dong CH, Zhu JK, Hasegawa PM, Bressan RA. HOS10 encodes an R2R3-type MYB transcription factor essential for cold acclimation in plants. Proceedings of the National Academy of Sciences of the United States of America. 102: 9966-71. PMID 15994234 DOI: 10.1073/Pnas.0503960102  0.846
2005 Sunkar R, Girke T, Jain PK, Zhu JK. Cloning and characterization of microRNAs from rice. The Plant Cell. 17: 1397-411. PMID 15805478 DOI: 10.1105/tpc.105.031682  0.579
2005 Gong Z, Dong CH, Lee H, Zhu J, Xiong L, Gong D, Stevenson B, Zhu JK. A DEAD box RNA helicase is essential for mRNA export and important for development and stress responses in Arabidopsis. The Plant Cell. 17: 256-67. PMID 15598798 DOI: 10.1105/Tpc.104.027557  0.845
2005 Chinnusamy V, Jagendorf A, Zhu JK. Understanding and improving salt tolerance in plants Crop Science. 45: 437-448. DOI: 10.2135/Cropsci2005.0437  0.44
2005 KAMEI A, SEKI M, UMEZAWA T, ISHIDA J, SATOU M, AKIYAMA K, ZHU J, SHINOZAKI K. Analysis of gene expression profiles in Arabidopsis salt overly sensitive mutants sos2-1 and sos3 -1 Plant, Cell and Environment. 28: 1267-1275. DOI: 10.1111/J.1365-3040.2005.01363.X  0.516
2004 Sánchez-Barrena MJ, Martínez-Ripoll M, Zhu JK, Albert A. The structure of the Arabidopsis thaliana SOS3: molecular mechanism of sensing calcium for salt stress response. Journal of Molecular Biology. 345: 1253-64. PMID 15644219 DOI: 10.1016/J.Jmb.2004.11.025  0.357
2004 Xiong L, Lee H, Huang R, Zhu JK. A single amino acid substitution in the Arabidopsis FIERY1/HOS2 protein confers cold signaling specificity and lithium tolerance. The Plant Journal : For Cell and Molecular Biology. 40: 536-45. PMID 15500469 DOI: 10.1111/J.1365-313X.2004.02225.X  0.856
2004 Rus A, Lee BH, Muñoz-Mayor A, Sharkhuu A, Miura K, Zhu JK, Bressan RA, Hasegawa PM. AtHKT1 facilitates Na+ homeostasis and K+ nutrition in planta. Plant Physiology. 136: 2500-11. PMID 15347798 DOI: 10.1104/Pp.104.042234  0.757
2004 Sunkar R, Zhu JK. Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis. The Plant Cell. 16: 2001-19. PMID 15258262 DOI: 10.1105/Tpc.104.022830  0.648
2004 Taji T, Seki M, Satou M, Sakurai T, Kobayashi M, Ishiyama K, Narusaka Y, Narusaka M, Zhu J, Shinozaki K. Comparative Genomics in Salt Tolerance between Arabidopsis and Arabidopsis-Related Halophyte Salt Cress Using Arabidopsis Microarray Plant Physiology. 135: 1697-1709. PMID 15247402 DOI: 10.1104/Pp.104.039909  0.481
2004 Inan G, Zhang Q, Li P, Wang Z, Cao Z, Zhang H, Zhang C, Quist TM, Goodwin SM, Zhu J, Shi H, Damsz B, Charbaji T, Gong Q, Ma S, ... ... Zhu JK, et al. Salt cress. A halophyte and cryophyte Arabidopsis relative model system and its applicability to molecular genetic analyses of growth and development of extremophiles. Plant Physiology. 135: 1718-37. PMID 15247369 DOI: 10.1104/Pp.104.041723  0.836
2004 Song CP, Guo Y, Qiu Q, Lambert G, Galbraith DW, Jagendorf A, Zhu JK. A probable Na+(K+)/H+ exchanger on the chloroplast envelope functions in pH homeostasis and chloroplast development in Arabidopsis thaliana Proceedings of the National Academy of Sciences of the United States of America. 101: 10211-10216. PMID 15220473 DOI: 10.1073/Pnas.0403709101  0.526
2004 Zhu J, Shi H, Lee BH, Damsz B, Cheng S, Stirm V, Zhu JK, Hasegawa PM, Bressan RA. An Arabidopsis homeodomain transcription factor gene, HOS9, mediates cold tolerance through a CBF-independent pathway. Proceedings of the National Academy of Sciences of the United States of America. 101: 9873-8. PMID 15205481 DOI: 10.1073/Pnas.0403166101  0.83
2004 Zhang JZ, Creelman RA, Zhu JK. From laboratory to field. Using information from Arabidopsis to engineer salt, cold, and drought tolerance in crops. Plant Physiology. 135: 615-21. PMID 15173567 DOI: 10.1104/Pp.104.040295  0.357
2004 Chinnusamy V, Schumaker K, Zhu JK. Molecular genetic perspectives on cross-talk and specificity in abiotic stress signalling in plants. Journal of Experimental Botany. 55: 225-36. PMID 14673035 DOI: 10.1093/Jxb/Erh005  0.665
2004 Wang ZL, Li PH, Fredricksen M, Gong ZZ, Kim CS, Zhang C, Bohnert HJ, Zhu JK, Bressan RA, Hasegawa PM, Zhao YX, Zhang H. Expressed sequence tags from Thellungiella halophila, a new model to study plant salt-tolerance Plant Science. 166: 609-616. DOI: 10.1016/J.Plantsci.2003.10.030  0.68
2003 Ohta M, Guo Y, Halfter U, Zhu JK. A novel domain in the protein kinase SOS2 mediates interaction with the protein phosphatase 2C ABI2. Proceedings of the National Academy of Sciences of the United States of America. 100: 11771-6. PMID 14504388 DOI: 10.1073/Pnas.2034853100  0.321
2003 Xiong L, Zhu JK. Regulation of abscisic acid biosynthesis. Plant Physiology. 133: 29-36. PMID 12970472 DOI: 10.1104/Pp.103.025395  0.751
2003 Hrabak EM, Chan CW, Gribskov M, Harper JF, Choi JH, Halford N, Kudla J, Luan S, Nimmo HG, Sussman MR, Thomas M, Walker-Simmons K, Zhu JK, Harmon AC. The Arabidopsis CDPK-SnRK superfamily of protein kinases. Plant Physiology. 132: 666-80. PMID 12805596 DOI: 10.1104/Pp.102.011999  0.328
2003 Chinnusamy V, Ohta M, Kanrar S, Lee BH, Hong X, Agarwal M, Zhu JK. ICE1: a regulator of cold-induced transcriptome and freezing tolerance in Arabidopsis. Genes & Development. 17: 1043-54. PMID 12672693 DOI: 10.1101/Gad.1077503  0.799
2003 Shi H, Kim Y, Guo Y, Stevenson B, Zhu JK. The Arabidopsis SOS5 locus encodes a putative cell surface adhesion protein and is required for normal cell expansion. The Plant Cell. 15: 19-32. PMID 12509519 DOI: 10.1105/Tpc.007872  0.407
2003 Shi H, Lee BH, Wu SJ, Zhu JK. Overexpression of a plasma membrane Na+/H+ antiporter gene improves salt tolerance in Arabidopsis thaliana. Nature Biotechnology. 21: 81-5. PMID 12469134 DOI: 10.1038/Nbt766  0.688
2003 Viswanathan C, Zhu JK. Molecular genetic analysis of cold-regulated gene transcription. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 357: 877-86. PMID 12171651 DOI: 10.1098/Rstb.2002.1076  0.512
2002 Xiong L, Zhu JK. Salt tolerance. The Arabidopsis Book / American Society of Plant Biologists. 1: e0048. PMID 22303210 DOI: 10.1199/tab.0048  0.754
2002 Gong Z, Morales-Ruiz T, Ariza RR, Roldán-Arjona T, David L, Zhu JK. ROS1, a repressor of transcriptional gene silencing in Arabidopsis, encodes a DNA glycosylase/lyase. Cell. 111: 803-14. PMID 12526807 DOI: 10.1016/s0092-8674(02)01133-9  0.664
2002 Zhu J, Gong Z, Zhang C, Song CP, Damsz B, Inan G, Koiwa H, Zhu JK, Hasegawa PM, Bressan RA. OSM1/SYP61: a syntaxin protein in Arabidopsis controls abscisic acid-mediated and non-abscisic acid-mediated responses to abiotic stress. The Plant Cell. 14: 3009-28. PMID 12468724 DOI: 10.1105/Tpc.006981  0.855
2002 Shi H, Zhu JK. Regulation of expression of the vacuolar Na+/H+ antiporter gene AtNHX1 by salt stress and abscisic acid. Plant Molecular Biology. 50: 543-50. PMID 12369629 DOI: 10.1023/A:1019859319617  0.46
2002 Gong D, Guo Y, Jagendorf AT, Zhu JK. Biochemical characterization of the Arabidopsis protein kinase SOS2 that functions in salt tolerance Plant Physiology. 130: 256-264. PMID 12226505 DOI: 10.1104/Pp.004507  0.365
2002 Zhu JK. Salt and drought stress signal transduction in plants. Annual Review of Plant Biology. 53: 247-73. PMID 12221975 DOI: 10.1146/Annurev.Arplant.53.091401.143329  0.452
2002 Gong D, Zhang C, Chen X, Gong Z, Zhu JK. Constitutive activation and transgenic evaluation of the function of an arabidopsis PKS protein kinase. The Journal of Biological Chemistry. 277: 42088-96. PMID 12198122 DOI: 10.1074/Jbc.M205504200  0.655
2002 Guo Y, Xiong L, Song CP, Gong D, Halfter U, Zhu JK. A calcium sensor and its interacting protein kinase are global regulators of abscisic acid signaling in Arabidopsis. Developmental Cell. 3: 233-44. PMID 12194854 DOI: 10.1016/S1534-5807(02)00229-0  0.803
2002 Gong Z, Lee H, Xiong L, Jagendorf A, Stevenson B, Zhu JK. RNA helicase-like protein as an early regulator of transcription factors for plant chilling and freezing tolerance Proceedings of the National Academy of Sciences of the United States of America. 99: 11507-11512. PMID 12165572 DOI: 10.1073/Pnas.172399299  0.849
2002 Xiong L, Lee H, Ishitani M, Tanaka Y, Stevenson B, Koiwa H, Bressan RA, Hasegawa PM, Zhu JK. Repression of stress-responsive genes by FIERY2, a novel transcriptional regulator in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. 99: 10899-904. PMID 12149453 DOI: 10.1073/Pnas.162111599  0.851
2002 Koiwa H, Barb AW, Xiong L, Li F, McCully MG, Lee BH, Sokolchik I, Zhu J, Gong Z, Reddy M, Sharkhuu A, Manabe Y, Yokoi S, Zhu JK, Bressan RA, et al. C-terminal domain phosphatase-like family members (AtCPLs) differentially regulate Arabidopsis thaliana abiotic stress signaling, growth, and development. Proceedings of the National Academy of Sciences of the United States of America. 99: 10893-8. PMID 12149434 DOI: 10.1073/Pnas.112276199  0.844
2002 Chinnusamy V, Stevenson B, Lee BH, Zhu JK. Screening for gene regulation mutants by bioluminescence imaging. Science's Stke : Signal Transduction Knowledge Environment. 2002: pl10. PMID 12107339 DOI: 10.1126/Stke.2002.140.Pl10  0.796
2002 Lee BH, Lee H, Xiong L, Zhu JK. A mitochondrial complex I defect impairs cold-regulated nuclear gene expression. The Plant Cell. 14: 1235-51. PMID 12084824 DOI: 10.1105/Tpc.010433  0.836
2002 Quintero FJ, Ohta M, Shi H, Zhu JK, Pardo JM. Reconstitution in yeast of the Arabidopsis SOS signaling pathway for Na+ homeostasis. Proceedings of the National Academy of Sciences of the United States of America. 99: 9061-6. PMID 12070350 DOI: 10.1073/Pnas.132092099  0.385
2002 Shi H, Zhu JK. SOS4, a pyridoxal kinase gene, is required for root hair development in Arabidopsis. Plant Physiology. 129: 585-93. PMID 12068103 DOI: 10.1104/Pp.001982  0.44
2002 Xiong L, Schumaker KS, Zhu JK. Cell signaling during cold, drought, and salt stress. The Plant Cell. 14: S165-83. PMID 12045276 DOI: 10.1105/Tpc.000596  0.755
2002 Guo Y, Xiong L, Ishitani M, Zhu JK. An Arabidopsis mutation in translation elongation factor 2 causes superinduction of CBF/DREB1 transcription factor genes but blocks the induction of their downstream targets under low temperatures. Proceedings of the National Academy of Sciences of the United States of America. 99: 7786-91. PMID 12032361 DOI: 10.1073/Pnas.112040099  0.786
2002 Lee H, Guo Y, Ohta M, Xiong L, Stevenson B, Zhu JK. LOS2, a genetic locus required for cold-responsive gene transcription encodes a bi-functional enolase. The Embo Journal. 21: 2692-702. PMID 12032082 DOI: 10.1093/Emboj/21.11.2692  0.838
2002 Gong D, Gong Z, Guo Y, Chen X, Zhu JK. Biochemical and functional characterization of PKS11, a novel Arabidopsis protein kinase. The Journal of Biological Chemistry. 277: 28340-50. PMID 12029080 DOI: 10.1074/Jbc.M107719200  0.644
2002 Gong D, Gong Z, Guo Y, Zhu JK. Expression, activation, and biochemical properties of a novel Arabidopsis protein kinase Plant Physiology. 129: 225-234. PMID 12011353 DOI: 10.1104/Pp.010776  0.627
2002 Shi H, Xiong L, Stevenson B, Lu T, Zhu JK. The Arabidopsis salt overly sensitive 4 mutants uncover a critical role for vitamin B6 in plant salt tolerance. The Plant Cell. 14: 575-88. PMID 11910005 DOI: 10.1105/Tpc.010417  0.786
2002 Shi H, Quintero FJ, Pardo JM, Zhu JK. The putative plasma membrane Na(+)/H(+) antiporter SOS1 controls long-distance Na(+) transport in plants. The Plant Cell. 14: 465-77. PMID 11884687 DOI: 10.1105/Tpc.010371  0.417
2002 Xiong L, Zhu JK. Molecular and genetic aspects of plant responses to osmotic stress. Plant, Cell & Environment. 25: 131-139. PMID 11841658 DOI: 10.1046/J.1365-3040.2002.00782.X  0.768
2002 Xiong L, Lee H, Ishitani M, Zhu JK. Regulation of osmotic stress-responsive gene expression by the LOS6/ABA1 locus in Arabidopsis. The Journal of Biological Chemistry. 277: 8588-96. PMID 11779861 DOI: 10.1074/Jbc.M109275200  0.858
2001 Bressan RA, Zhang C, Zhang H, Hasegawa PM, Bohnert HJ, Zhu JK. Learning from the Arabidopsis experience. The next gene search paradigm Plant Physiology. 127: 1354-1360. PMID 11743073 DOI: 10.1104/Pp.010752  0.657
2001 Xiong L, Gong Z, Rock CD, Subramanian S, Guo Y, Xu W, Galbraith D, Zhu JK. Modulation of abscisic acid signal transduction and biosynthesis by an Sm-like protein in Arabidopsis. Developmental Cell. 1: 771-81. PMID 11740939 DOI: 10.1016/S1534-5807(01)00087-9  0.796
2001 Rus A, Yokoi S, Sharkhuu A, Reddy M, Lee BH, Matsumoto TK, Koiwa H, Zhu JK, Bressan RA, Hasegawa PM. AtHKT1 is a salt tolerance determinant that controls Na(+) entry into plant roots. Proceedings of the National Academy of Sciences of the United States of America. 98: 14150-5. PMID 11698666 DOI: 10.1073/Pnas.241501798  0.771
2001 Zhu J. Cell signaling under salt, water and cold stresses. Current Opinion in Plant Biology. 4: 401-406. PMID 11597497 DOI: 10.1016/S1369-5266(00)00192-8  0.473
2001 Xiong L, Ishitani M, Lee H, Zhu JK. The Arabidopsis LOS5/ABA3 locus encodes a molybdenum cofactor sulfurase and modulates cold stress- and osmotic stress-responsive gene expression. The Plant Cell. 13: 2063-83. PMID 11549764 DOI: 10.1105/Tpc.010101  0.853
2001 Xiong L, Lee Bh, Ishitani M, Lee H, Zhang C, Zhu JK. FIERY1 encoding an inositol polyphosphate 1-phosphatase is a negative regulator of abscisic acid and stress signaling in Arabidopsis. Genes & Development. 15: 1971-84. PMID 11485991 DOI: 10.1101/Gad.891901  0.85
2001 Xiong L, Zhu JK. Abiotic stress signal transduction in plants: Molecular and genetic perspectives. Physiologia Plantarum. 112: 152-166. PMID 11454221 DOI: 10.1034/J.1399-3054.2001.1120202.X  0.792
2001 Gong Z, Koiwa H, Cushman MA, Ray A, Bufford D, Kore-eda S, Matsumoto TK, Zhu J, Cushman JC, Bressan RA, Hasegawa PM. Genes that are uniquely stress regulated in salt overly sensitive (sos) mutants Plant Physiology. 126: 363-375. PMID 11351099 DOI: 10.1104/Pp.126.1.363  0.708
2001 Lee H, Xiong L, Gong Z, Ishitani M, Stevenson B, Zhu JK. The Arabidopsis HOS1 gene negatively regulates cold signal transduction and encodes a RING finger protein that displays cold-regulated nucleo--cytoplasmic partitioning. Genes & Development. 15: 912-24. PMID 11297514 DOI: 10.1101/Gad.866801  0.842
2001 Guo Y, Halfter U, Ishitani M, Zhu J. Molecular Characterization of Functional Domains in the Protein Kinase SOS2 That Is Required for Plant Salt Tolerance The Plant Cell. 13: 1383-1400. DOI: 10.1105/Tpc.010021  0.306
2001 Xiong L, Zhu JK. Abiotic stress signal transduction in plants: Molecular and genetic perspectives Physiologia Plantarum. 112: 152-166. DOI: 10.1034/j.1399-3054.2001.1120202.x  0.778
2001 Bohnert HJ, Ayoubi P, Borchert C, Bressan RA, Burnap RL, Cushman JC, Cushman MA, Deyholos M, Fischer R, Galbraith DW, Hasegawa PM, Jenks M, Kawasaki S, Koiwa H, Kore-eda S, ... ... Zhu JK, et al. A genomics approach towards salt stress tolerance Plant Physiology and Biochemistry. 39: 295-311. DOI: 10.1016/S0981-9428(00)01237-7  0.843
2000 Hasegawa PM, Bressan RA, Zhu JK, Bohnert HJ. PLANT CELLULAR AND MOLECULAR RESPONSES TO HIGH SALINITY. Annual Review of Plant Physiology and Plant Molecular Biology. 51: 463-499. PMID 15012199 DOI: 10.1146/annurev.arplant.51.1.463  0.737
2000 Zhu J. Genetic Analysis of Plant Salt Tolerance Using Arabidopsis Plant Physiology. 124: 941-948. PMID 11080272 DOI: 10.1104/Pp.124.3.941  0.419
2000 Ishitani M, Liu J, Halfter U, Kim C, Shi W, Zhu J. SOS3 Function in Plant Salt Tolerance Requires N-Myristoylation and Calcium Binding The Plant Cell. 12: 1667-1678. PMID 11006339 DOI: 10.1105/Tpc.12.9.1667  0.631
2000 Shi H, Ishitani M, Kim C, Zhu J. The Arabidopsis thaliana salt tolerance gene SOS1 encodes a putative Na+/H+ antiporter. Proceedings of the National Academy of Sciences of the United States of America. 97: 6896-6901. PMID 10823923 DOI: 10.1073/Pnas.120170197  0.474
2000 Halfter U, Ishitani M, Zhu J. The Arabidopsis SOS2 protein kinase physically interacts with and is activated by the calcium-binding protein SOS3 Proceedings of the National Academy of Sciences of the United States of America. 97: 3735-3740. DOI: 10.1073/Pnas.97.7.3735  0.378
2000 Liu J, Ishitani M, Halfter U, Kim C, Zhu J. The Arabidopsis thaliana SOS2 gene encodes a protein kinase that is required for salt tolerance Proceedings of the National Academy of Sciences of the United States of America. 97: 3730-3734. DOI: 10.1073/Pnas.97.7.3730  0.638
1999 Xiong L, Ishitani M, Lee H, Zhu JK. HOS5-a negative regulator of osmotic stress-induced gene expression in Arabidopsis thaliana. The Plant Journal : For Cell and Molecular Biology. 19: 569-78. PMID 10504578 DOI: 10.1046/J.1365-313X.1999.00558.X  0.844
1999 Lee H, Xiong L, Ishitani M, Stevenson B, Zhu JK. Cold-regulated gene expression and freezing tolerance in an Arabidopsis thaliana mutant. The Plant Journal : For Cell and Molecular Biology. 17: 301-8. PMID 10097388 DOI: 10.1046/J.1365-313X.1999.00375.X  0.845
1999 Xiong L, Ishitani M, Zhu JK. Interaction of osmotic stress, temperature, and abscisic acid in the regulation of gene expression in Arabidopsis. Plant Physiology. 119: 205-12. PMID 9880362 DOI: 10.1104/Pp.119.1.205  0.776
1999 Xiong L, David L, Stevenson B, Zhu J. Plant Molecular Biology Reporter. 17: 159-170. DOI: 10.1023/A:1007519200505  0.78
1998 Zhu JK, Liu J, Xiong L. Genetic analysis of salt tolerance in arabidopsis. Evidence for a critical role of potassium nutrition. The Plant Cell. 10: 1181-91. PMID 9668136 DOI: 10.1105/Tpc.10.7.1181  0.815
1998 Ishitani M, Xiong L, Lee H, Stevenson B, Zhu JK. HOS1, a genetic locus involved in cold-responsive gene expression in arabidopsis. The Plant Cell. 10: 1151-61. PMID 9668134 DOI: 10.1105/Tpc.10.7.1151  0.853
1998 Liu J, Zhu J. A Calcium Sensor Homolog Required for Plant Salt Tolerance Science. 280: 1943-1945. PMID 9632394 DOI: 10.1126/Science.280.5371.1943  0.625
1998 Ding L, Zhu JK. A role for arabinogalactan-proteins in root epidermal cell expansion. Planta. 203: 289-94. PMID 9431677 DOI: 10.1007/S004250050194  0.317
1998 Frohnmeyer H, Bowler C, Zhu J, Yamagata H, Schäfer E, Chua N. Different roles for calcium and calmodulin in phytochrome‐ and UV‐regulated expression of chalcone synthase The Plant Journal. 13: 763-772. DOI: 10.1046/J.1365-313X.1998.00074.X  0.334
1997 Liu J, Zhu J. An Arabidopsis mutant that requires increased calcium for potassium nutrition and salt tolerance Proceedings of the National Academy of Sciences of the United States of America. 94: 14960-14964. PMID 9405721 DOI: 10.1073/Pnas.94.26.14960  0.633
1997 Ishitani M, Xiong L, Stevenson B, Zhu JK. Genetic analysis of osmotic and cold stress signal transduction in Arabidopsis: interactions and convergence of abscisic acid-dependent and abscisic acid-independent pathways. The Plant Cell. 9: 1935-49. PMID 9401119 DOI: 10.1105/Tpc.9.11.1935  0.801
1996 Wu S, Ding L, Zhu J. SOS1, a Genetic Locus Essential for Salt Tolerance and Potassium Acquisition. The Plant Cell. 8: 617-627. PMID 12239394 DOI: 10.1105/Tpc.8.4.617  0.437
1996 Lin Y, Wang Y, Zhu J, Yang Z. Localization of a Rho GTPase Implies a Role in Tip Growth and Movement of the Generative Cell in Pollen Tubes. The Plant Cell. 8: 293-303. PMID 12239385 DOI: 10.1105/Tpc.8.2.293  0.331
1996 Zhu J, Hasegawa PM, Bressan RA, Niu X. Multiple transcripts of a calcium-binding protein gene from Atriplex nummularia are differentially regulated by developmental and environmental stimuli Physiologia Plantarum. 97: 499-506. DOI: 10.1111/j.1399-3054.1996.tb00509.x  0.48
1996 Zhu JK, Hasegawa PM, Bressan RA, Niu X. Multiple transcripts of a calcium-binding protein gene from Atriplex nummularia are differentially regulated by developmental and environmental stimuli Physiologia Plantarum. 97: 499-506. DOI: 10.1111/J.1399-3054.1996.Tb00509.X  0.683
1995 Zhu JK, Bressan RA, Hasegawa PM. Chapter 3 Determination of Protein Isoprenylation in Vitro and in Vivo Methods in Cell Biology. 50: 31-39. PMID 8531804 DOI: 10.1016/S0091-679X(08)61020-1  0.654
1994 Zhu JK, Damsz B, Kononowicz AK, Bressan RA, Hasegawa PM. A higher plant extracellular vitronectin-like adhesion protein is related to the translational elongation factor-1α Plant Cell. 6: 393-404. PMID 7514059 DOI: 10.1105/Tpc.6.3.393  0.673
1993 Zhu JK, Shi J, Bressan RA, Hasegawa PM. Expression of an Atriplex nummularia gene encoding a protein homologous to the bacterial molecular chaperone DnaJ. The Plant Cell. 5: 341-9. PMID 8467224 DOI: 10.1105/Tpc.5.3.341  0.686
1993 Zhu JK, Bressan RA, Hasegawa PM. Isoprenylation of the plant molecular chaperone ANJ1 facilitates membrane association and function at high temperature Proceedings of the National Academy of Sciences of the United States of America. 90: 8557-8561. PMID 8378331 DOI: 10.1073/Pnas.90.18.8557  0.691
1993 Niu X, Zhu JK, Narasimhan ML, Bressan RA, Hasegawa PM. Plasma-membrane H+-ATPase gene expression is regulated by NaCl in cells of the halophyte Atriplex nummularia L Planta. 190: 433-438. PMID 7763822 DOI: 10.1007/Bf00224780  0.634
1993 Zhu J, Shi J, Singh U, Wyatt SE, Bressan RA, Hasegawa PM, Carpita NC. Enrichment of vitronectin- and fibronectin-like proteins in NaCl-adapted plant cells and evidence for their involvement in plasma membrane-cell wall adhesion The Plant Journal. 3: 637-646. DOI: 10.1111/J.1365-313X.1993.00637.X  0.634
1993 Zhu JK, Bressan RA, Hasegawa PM. Loss of arabinogalactan-proteins from the plasma membrane of NaCl-adapted tobacco cells Planta. 190: 221-226. DOI: 10.1007/Bf00196614  0.608
1991 Zhu JK, Nothnagel EA. Fluorometric determination of carbohydrate with 2-aminothiophenol. Analytical Biochemistry. 195: 101-4. PMID 1888005 DOI: 10.1016/0003-2697(91)90302-A  0.628
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