| Year |
Citation |
Score |
| 2022 |
Wishart DS, Oler E, Peters H, Guo A, Girod S, Han S, Saha S, Lui VW, LeVatte M, Gautam V, Kaddurah-Daouk R, Karu N. MiMeDB: the Human Microbial Metabolome Database. Nucleic Acids Research. PMID 36215042 DOI: 10.1093/nar/gkac868 |
0.305 |
|
| 2022 |
Goldansaz SA, Markus S, Plastow G, Wishart DS. Predictive blood biomarkers of sheep pregnancy and litter size. Scientific Reports. 12: 10307. PMID 35725997 DOI: 10.1038/s41598-022-14141-w |
0.761 |
|
| 2021 |
Hailemariam D, Goldansaz SA, Daude N, Wishart DS, Ametaj BN. Mice Treated Subcutaneously with Mouse LPS-Converted PrP or LPS Alone Showed Brain Gene Expression Profiles Characteristic of Prion Disease. Veterinary Sciences. 8. PMID 34564594 DOI: 10.3390/vetsci8090200 |
0.728 |
|
| 2020 |
Goldansaz SA, Markus S, Berjanskii M, Rout M, Guo AC, Wang Z, Plastow G, Wishart DS. Candidate serum metabolite biomarkers of residual feed intake and carcass merit in sheep. Journal of Animal Science. PMID 32926096 DOI: 10.1093/Jas/Skaa298 |
0.77 |
|
| 2019 |
Thompson JW, Adams KJ, Adamski J, Asad Y, Borts D, Bowden JA, Byram G, Dang VD, Dunn WB, Fernandez FM, Fiehn O, Gaul DA, Huhmer A, Kalli A, Koal T, ... ... Wishart DS, et al. International Ring Trial of a High Resolution Targeted Metabolomics and Lipidomics Platform for Serum and Plasma Analysis. Analytical Chemistry. PMID 31638379 DOI: 10.1021/Acs.Analchem.9B02908 |
0.335 |
|
| 2019 |
Foroutan A, Goldansaz SA, Lipfert M, Wishart DS. Protocols for NMR Analysis in Livestock Metabolomics. Methods in Molecular Biology (Clifton, N.J.). 1996: 311-324. PMID 31127564 DOI: 10.1007/978-1-4939-9488-5_23 |
0.77 |
|
| 2019 |
Pinu FR, Beale DJ, Paten AM, Kouremenos K, Swarup S, Schirra HJ, Wishart D. Systems Biology and Multi-Omics Integration: Viewpoints from the Metabolomics Research Community. Metabolites. 9. PMID 31003499 DOI: 10.3390/Metabo9040076 |
0.344 |
|
| 2018 |
Tian S, Djoumbou Y, Greiner R, Wishart DS. CypReact: A Software Tool for in silico Reactant Prediction for Human Cytochrome P450 Enzymes. Journal of Chemical Information and Modeling. PMID 29738669 DOI: 10.1021/acs.jcim.8b00035 |
0.764 |
|
| 2018 |
Mandal R, Chamot D, Wishart DS. The role of the Human Metabolome Database in inborn errors of metabolism. Journal of Inherited Metabolic Disease. PMID 29663269 DOI: 10.1007/s10545-018-0137-8 |
0.321 |
|
| 2018 |
Martens J, Berden G, Bentlage H, Coene KLM, Engelke UF, Wishart D, van Scherpenzeel M, Kluijtmans LAJ, Wevers RA, Oomens J. Unraveling the unknown areas of the human metabolome: the role of infrared ion spectroscopy. Journal of Inherited Metabolic Disease. PMID 29556837 DOI: 10.1007/S10545-018-0161-8 |
0.37 |
|
| 2018 |
Zhang G, Dervishi E, Wishart D, Ametaj B. PSXVII-34 Targeted metabolomics profiling for identification of novel serum biomarkers in early prediction of subclinical mastitis in transition dairy cows. Journal of Animal Science. 96: 43-44. DOI: 10.1093/Jas/Sky404.097 |
0.304 |
|
| 2018 |
Hailemariam D, Zhang G, Wishart D, Ametaj B. PSXVII-33 Identification of urine metabolite signatures for monitoring dairy cows for susceptibility to metritis by DI/LC-MS/MS-based metabolomics. Journal of Animal Science. 96: 43-43. DOI: 10.1093/Jas/Sky404.096 |
0.301 |
|
| 2018 |
Ametaj B, Zhang G, Dervishi E, Wishart D. 235 Milk metabotyping by DI/LC-MS/MS demonstrated major alterations in metabolites related to lipid and amino acid metabolism in dairy cows affected by subclinical mastitis. Journal of Animal Science. 96: 21-21. DOI: 10.1093/Jas/Sky404.048 |
0.318 |
|
| 2018 |
Ametaj B, Zhang G, Dervishi E, Wishart D. 231 Urinary metabotyping around parturition indicates consistent metabolite signatures that can be used for monitoring and diagnosing of subclinical mastitis in dairy cows. Journal of Animal Science. 96: 19-20. DOI: 10.1093/Jas/Sky404.044 |
0.321 |
|
| 2017 |
Wishart DS, Feunang YD, Marcu A, Guo AC, Liang K, Vázquez-Fresno R, Sajed T, Johnson D, Li C, Karu N, Sayeeda Z, Lo E, Assempour N, Berjanskii M, Singhal S, et al. HMDB 4.0: the human metabolome database for 2018. Nucleic Acids Research. PMID 29140435 DOI: 10.1093/Nar/Gkx1089 |
0.362 |
|
| 2017 |
Huang W, Brewer LK, Jones JW, Nguyen AT, Marcu A, Wishart DS, Oglesby-Sherrouse AG, Kane MA, Wilks A. PAMDB: a comprehensive Pseudomonas aeruginosa metabolome database. Nucleic Acids Research. PMID 29106626 DOI: 10.1093/Nar/Gkx1061 |
0.343 |
|
| 2017 |
Goldansaz SA, Guo AC, Sajed T, Steele MA, Plastow GS, Wishart DS. Livestock metabolomics and the livestock metabolome: A systematic review. Plos One. 12: e0177675. PMID 28531195 DOI: 10.1371/Journal.Pone.0177675 |
0.783 |
|
| 2016 |
Ramirez-Gaona M, Marcu A, Pon A, Guo AC, Sajed T, Wishart NA, Karu N, Djoumbou Feunang Y, Arndt D, Wishart DS. YMDB 2.0: a significantly expanded version of the yeast metabolome database. Nucleic Acids Research. PMID 27899612 DOI: 10.1093/nar/gkw1058 |
0.304 |
|
| 2016 |
Allen F, Pon A, Greiner R, Wishart DS. Computational prediction of electron ionization mass spectra to assist in GC-MS compound identification. Analytical Chemistry. PMID 27381172 DOI: 10.1021/Acs.Analchem.6B01622 |
0.351 |
|
| 2016 |
Graham SF, Kumar PK, Bjorndahl T, Han B, Yilmaz A, Sherman E, Bahado-Singh RO, Wishart D, Mann D, Green BD. Metabolic signatures of Huntington's disease (HD): (1)H NMR analysis of the polar metabolome in post mortem human brain. Biochimica Et Biophysica Acta. PMID 27288730 DOI: 10.1016/J.Bbadis.2016.06.007 |
0.307 |
|
| 2016 |
Tarailo-Graovac M, Shyr C, Ross CJ, Horvath GA, Salvarinova R, Ye XC, Zhang LH, Bhavsar AP, Lee JJ, Drögemöller BI, Abdelsayed M, Alfadhel M, Armstrong L, Baumgartner MR, Burda P, ... ... Wishart D, et al. Exome Sequencing and the Management of Neurometabolic Disorders. The New England Journal of Medicine. 374: 2246-2255. PMID 27276562 DOI: 10.1056/Nejmoa1515792 |
0.312 |
|
| 2015 |
Sajed T, Marcu A, Ramirez M, Pon A, Guo AC, Knox C, Wilson M, Grant JR, Djoumbou Y, Wishart DS. ECMDB 2.0: A richer resource for understanding the biochemistry of E. coli. Nucleic Acids Research. PMID 26481353 DOI: 10.1093/Nar/Gkv1060 |
0.785 |
|
| 2015 |
Emwas AH, Luchinat C, Turano P, Tenori L, Roy R, Salek RM, Ryan D, Merzaban JS, Kaddurah-Daouk R, Zeri AC, Nagana Gowda GA, Raftery D, Wang Y, Brennan L, Wishart DS. Standardizing the experimental conditions for using urine in NMR-based metabolomic studies with a particular focus on diagnostic studies: a review. Metabolomics : Official Journal of the Metabolomic Society. 11: 872-894. PMID 26109927 DOI: 10.1007/s11306-014-0746-7 |
0.307 |
|
| 2015 |
Wishart D, Arndt D, Pon A, Sajed T, Guo AC, Djoumbou Y, Knox C, Wilson M, Liang Y, Grant J, Liu Y, Goldansaz SA, Rappaport SM. T3DB: the toxic exposome database. Nucleic Acids Research. 43: D928-34. PMID 25378312 DOI: 10.1093/Nar/Gku1004 |
0.743 |
|
| 2014 |
Law V, Knox C, Djoumbou Y, Jewison T, Guo AC, Liu Y, Maciejewski A, Arndt D, Wilson M, Neveu V, Tang A, Gabriel G, Ly C, Adamjee S, Dame ZT, ... ... Wishart DS, et al. DrugBank 4.0: shedding new light on drug metabolism. Nucleic Acids Research. 42: D1091-7. PMID 24203711 DOI: 10.1093/Nar/Gkt1068 |
0.771 |
|
| 2014 |
Jewison T, Su Y, Disfany FM, Liang Y, Knox C, Maciejewski A, Poelzer J, Huynh J, Zhou Y, Arndt D, Djoumbou Y, Liu Y, Deng L, Guo AC, Han B, ... ... Wishart DS, et al. SMPDB 2.0: big improvements to the Small Molecule Pathway Database. Nucleic Acids Research. 42: D478-84. PMID 24203708 DOI: 10.1093/Nar/Gkt1067 |
0.784 |
|
| 2014 |
Varadi M, Kosol S, Lebrun P, Valentini E, Blackledge M, Dunker AK, Felli IC, Forman-Kay JD, Kriwacki RW, Pierattelli R, Sussman J, Svergun DI, Uversky VN, Vendruscolo M, Wishart D, et al. pE-DB: a database of structural ensembles of intrinsically disordered and of unfolded proteins. Nucleic Acids Research. 42: D326-35. PMID 24174539 DOI: 10.1093/Nar/Gkt960 |
0.329 |
|
| 2013 |
Li L, Li R, Zhou J, Zuniga A, Stanislaus AE, Wu Y, Huan T, Zheng J, Shi Y, Wishart DS, Lin G. MyCompoundID: using an evidence-based metabolome library for metabolite identification. Analytical Chemistry. 85: 3401-8. PMID 23373753 DOI: 10.1021/Ac400099B |
0.309 |
|
| 2013 |
Wishart DS, Jewison T, Guo AC, Wilson M, Knox C, Liu Y, Djoumbou Y, Mandal R, Aziat F, Dong E, Bouatra S, Sinelnikov I, Arndt D, Xia J, Liu P, et al. HMDB 3.0--The Human Metabolome Database in 2013. Nucleic Acids Research. 41: D801-7. PMID 23161693 DOI: 10.1093/Nar/Gks1065 |
0.788 |
|
| 2013 |
Guo AC, Jewison T, Wilson M, Liu Y, Knox C, Djoumbou Y, Lo P, Mandal R, Krishnamurthy R, Wishart DS. ECMDB: the E. coli Metabolome Database. Nucleic Acids Research. 41: D625-30. PMID 23109553 DOI: 10.1093/Nar/Gks992 |
0.795 |
|
| 2013 |
Bahado-Singh R, Akolekar R, Mandal R, Chelliah A, Dong E, Xia J, Kruger M, Wishart D, NIcolaides K. 597: Metabolomic prediction of trisomy 18 first trimester pregnancies American Journal of Obstetrics and Gynecology. 208. DOI: 10.1016/J.Ajog.2012.10.763 |
0.333 |
|
| 2012 |
Rothwell JA, Urpi-Sarda M, Boto-Ordoñez M, Knox C, Llorach R, Eisner R, Cruz J, Neveu V, Wishart D, Manach C, Andres-Lacueva C, Scalbert A. Phenol-Explorer 2.0: a major update of the Phenol-Explorer database integrating data on polyphenol metabolism and pharmacokinetics in humans and experimental animals. Database : the Journal of Biological Databases and Curation. 2012: bas031. PMID 22879444 DOI: 10.1093/Database/Bas031 |
0.302 |
|
| 2012 |
Jewison T, Knox C, Neveu V, Djoumbou Y, Guo AC, Lee J, Liu P, Mandal R, Krishnamurthy R, Sinelnikov I, Wilson M, Wishart DS. YMDB: the Yeast Metabolome Database. Nucleic Acids Research. 40: D815-20. PMID 22064855 DOI: 10.1093/Nar/Gkr916 |
0.798 |
|
| 2011 |
Orchard S, Al-Lazikani B, Bryant S, Clark D, Calder E, Dix I, Engkvist O, Forster M, Gaulton A, Gilson M, Glen R, Grigorov M, Hammond-Kosack K, Harland L, Hopkins A, ... ... Wishart D, et al. Minimum information about a bioactive entity (MIABE). Nature Reviews. Drug Discovery. 10: 661-9. PMID 21878981 DOI: 10.1038/Nrd3503 |
0.374 |
|
| 2011 |
Scalbert A, Andres-Lacueva C, Arita M, Kroon P, Manach C, Urpi-Sarda M, Wishart D. Databases on food phytochemicals and their health-promoting effects. Journal of Agricultural and Food Chemistry. 59: 4331-4348. PMID 21438636 DOI: 10.1021/Jf200591D |
0.371 |
|
| 2011 |
Knox C, Law V, Jewison T, Liu P, Ly S, Frolkis A, Pon A, Banco K, Mak C, Neveu V, Djoumbou Y, Eisner R, Guo AC, Wishart DS. DrugBank 3.0: a comprehensive resource for 'omics' research on drugs. Nucleic Acids Research. 39: D1035-41. PMID 21059682 DOI: 10.1093/Nar/Gkq1126 |
0.765 |
|
| 2011 |
Vaisipour S, Greiner R, Wishart D, Bastani M, Yu C. Learning predictors by integrating multiple microarray datasets F1000research. 2. DOI: 10.7490/F1000Research.1294.1 |
0.317 |
|
| 2010 |
Xia J, Wishart DS. MSEA: a web-based tool to identify biologically meaningful patterns in quantitative metabolomic data. Nucleic Acids Research. 38: W71-7. PMID 20457745 DOI: 10.1093/nar/gkq329 |
0.305 |
|
| 2010 |
Lim E, Pon A, Djoumbou Y, Knox C, Shrivastava S, Guo AC, Neveu V, Wishart DS. T3DB: a comprehensively annotated database of common toxins and their targets. Nucleic Acids Research. 38: D781-6. PMID 19897546 DOI: 10.1093/Nar/Gkp934 |
0.779 |
|
| 2010 |
Salimi F, Mandal R, Wishart D, Mahadevan R. Understanding clostridium acetobutylicum ATCC 824 metabolism using genome-scale thermodynamics and metabolomics-based modeling Ifac Proceedings Volumes (Ifac-Papersonline). 11: 126-131. DOI: 10.3182/20100707-3-Be-2012.0022 |
0.348 |
|
| 2009 |
Forsythe IJ, Wishart DS. Exploring human metabolites using the human metabolome database. Current Protocols in Bioinformatics. Unit14.8. PMID 19274632 DOI: 10.1002/0471250953.bi1408s25 |
0.344 |
|
| 2008 |
Zhang N, Shaw AR, Li N, Chen R, Mak A, Hu X, Young N, Wishart D, Li L. Liquid chromatography electrospray ionization and matrix-assisted laser desorption ionization tandem mass spectrometry for the analysis of lipid raft proteome of monocytes. Analytica Chimica Acta. 627: 82-90. PMID 18790130 DOI: 10.1016/J.Aca.2008.05.058 |
0.301 |
|
| 2007 |
Knox C, Shrivastava S, Stothard P, Eisner R, Wishart DS. BioSpider: a web server for automating metabolome annotations. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 145-56. PMID 17990488 |
0.32 |
|
| 2007 |
Wishart DS, Tzur D, Knox C, Eisner R, Guo AC, Young N, Cheng D, Jewell K, Arndt D, Sawhney S, Fung C, Nikolai L, Lewis M, Coutouly MA, Forsythe I, et al. HMDB: the Human Metabolome Database. Nucleic Acids Research. 35: D521-6. PMID 17202168 DOI: 10.1093/Nar/Gkl923 |
0.343 |
|
| 2005 |
Wishart D. NMR Spectroscopy and Protein Structure Determination: Applications to Drug Discovery and Development Current Pharmaceutical Biotechnology. 6: 105-120. PMID 15853690 DOI: 10.2174/1389201053642367 |
0.346 |
|
| 2004 |
Dworzanski JP, Snyder AP, Chen R, Zhang H, Wishart D, Li L. Identification of bacteria using tandem mass spectrometry combined with a proteome database and statistical scoring. Analytical Chemistry. 76: 2355-66. PMID 15080748 DOI: 10.1021/Ac0349781 |
0.325 |
|
| 2002 |
Yee A, Chang X, Pineda-Lucena A, Wu B, Semesi A, Le B, Ramelot T, Lee GM, Bhattacharyya S, Gutierrez P, Denisov A, Lee CH, Cort JR, Kozlov G, Liao J, ... ... Wishart D, et al. An NMR approach to structural proteomics. Proceedings of the National Academy of Sciences of the United States of America. 99: 1825-30. PMID 11854485 DOI: 10.1073/Pnas.042684599 |
0.34 |
|
| 1994 |
Wishart DS, Boyko RF, Willard L, Richards FM, Sykes BD. SEQSEE: a comprehensive program suite for protein sequence analysis. Computer Applications in the Biosciences : Cabios. 10: 121-32. PMID 8019859 DOI: 10.1093/Bioinformatics/10.2.121 |
0.498 |
|
| 1993 |
Wishart DS, Sykes BD, Richards FM. Improved synthetic methods for the selective deuteration of aromatic amino acids: applications of selective protonation towards the identification of protein folding intermediates through nuclear magnetic resonance. Biochimica Et Biophysica Acta. 1164: 36-46. PMID 8390859 DOI: 10.1016/0167-4838(93)90109-5 |
0.484 |
|
| 1992 |
Wishart DS, Sykes BD, Richards FM. The chemical shift index: a fast and simple method for the assignment of protein secondary structure through NMR spectroscopy. Biochemistry. 31: 1647-51. PMID 1737021 DOI: 10.1021/Bi00121A010 |
0.492 |
|
| 1992 |
Wishart DS, Sykes BD, Richards FM. An improved synthesis of α-13C glycine and heteronuclear NMR studies of its incorporation into thioredoxin Journal of Labelled Compounds and Radiopharmaceuticals. 31: 1019-1028. DOI: 10.1002/Jlcr.2580311209 |
0.48 |
|
| 1991 |
Wishart DS, Sykes BD, Richards FM. Relationship between nuclear magnetic resonance chemical shift and protein secondary structure. Journal of Molecular Biology. 222: 311-33. PMID 1960729 DOI: 10.1016/0022-2836(91)90214-Q |
0.481 |
|
| 1991 |
Wishart DS, Sykes BD, Richards FM. Simple techniques for the quantification of protein secondary structure by 1H NMR spectroscopy. Febs Letters. 293: 72-80. PMID 1959674 DOI: 10.1016/0014-5793(91)81155-2 |
0.487 |
|
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