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Yu Tom Gao, Ph.D.

Affiliations:	2009-2014	Chemistry	The Scripps Research Institute, Scripps Florida
	2014-2018	Molecular Medicine	The Scripps Research Institute, California, USA
	2018-	College of Pharmacy	University of Illinois at Chicago, Chicago, IL, United States

Area:

Chemical Biology, Proteomics, Bioinformatics

Website:

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Mean distance: 8.13

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Parents

Thomas J. Kodadek	grad student	2008-2014	Scripps Research Institute Florida
John Yates III	post-doc	2014-	Scripps Institute

Children

Julia Ekiert	grad student	2022-	University of Illinois, Chicago
Xinhao Shao	grad student	2018-2023	University of Illinois, Chicago
Ziwei Zhang	grad student	2019-2023	University of Illinois, Chicago
Cory Jack Matsumoto	grad student	2019-2024	University of Illinois, Chicago
Michael Hollas	post-doc	2018-	University of Illinois, Chicago
Liang Chen	post-doc	2021-	University of Illinois, Chicago
Xiuyuan Ma	post-doc	2019-2021	University of Illinois, Chicago
Rahul Narayanan	post-doc	2021-2023	University of Illinois, Chicago
Angela Mahaffey	research scientist	2022-2023	University of Illinois, Chicago

Collaborators

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Publications

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Maldonado AC, Haughan MA, Khin M, et al. (2023) Probing the Cytotoxic Signaling Induced by Eupenifeldin in Ovarian Cancer Models. Journal of Natural Products
Shao X, Grams C, Gao Y. (2022) Sequence Coverage Visualizer: A Web Application for Protein Sequence Coverage 3D Visualization. Journal of Proteome Research
Zhang Z, Gao Y. (2022) Evaluation of the Binding Preference of Microtubes for Nanoproteomics Sample Preparation. Journal of Proteome Research
Shao X, Gomez CD, Kapoor N, et al. (2022) MatrisomeDB 2.0: 2023 updates to the ECM-protein knowledge database. Nucleic Acids Research
Laczkovich I, Mangano K, Shao X, et al. (2022) Discovery of Unannotated Small Open Reading Frames in Streptococcus pneumoniae D39 Involved in Quorum Sensing and Virulence Using Ribosome Profiling. Mbio. e0124722
Mangano K, Florin T, Shao X, et al. (2020) Genome-wide effects of the antimicrobial peptide apidaecin on translation termination in bacteria. Elife. 9
Gao Y, Dasgupta C, Huang L, et al. (2019) Multi-Omics Integration Reveals Short and Long-Term Effects of Gestational Hypoxia on the Heart Development. Cells. 8
Shao X, Taha IN, Clauser KR, et al. (2019) MatrisomeDB: the ECM-protein knowledge database. Nucleic Acids Research
Xu T, Park SK, Venable JD, et al. (2015) ProLuCID: An improved SEQUEST-like algorithm with enhanced sensitivity and specificity. Journal of Proteomics
Doran TM, Gao Y, Simanski S, et al. (2015) High affinity binding of conformationally constrained synthetic oligomers to an antigen-specific antibody: Discovery of a diagnostically useful synthetic ligand for murine Type 1 diabetes autoantibodies. Bioorganic & Medicinal Chemistry Letters. 25: 4910-7

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