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Xiaoyin Chen, Ph.D. - Publications

Affiliations: 
2005-2013 Biological Sciences Columbia University, New York, NY 
 2015-2021 Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 
 2021- Allen Institute for Brain Science Allen Institute 
Area:
Neuroanatomy, spatial transcriptomics, in situ sequencing
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11 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Yuan L, Chen X, Zhan H, Gilbert HL, Zador AM. Massive Multiplexing of Spatially Resolved Single Neuron Projections with Axonal BARseq. Biorxiv : the Preprint Server For Biology. PMID 36824753 DOI: 10.1101/2023.02.18.528865  0.661
2022 Chen Y, Chen X, Baserdem B, Zhan H, Li Y, Davis MB, Kebschull JM, Zador AM, Koulakov AA, Albeanu DF. High-throughput sequencing of single neuron projections reveals spatial organization in the olfactory cortex. Cell. 185: 4117-4134.e28. PMID 36306734 DOI: 10.1016/j.cell.2022.09.038  0.718
2021 Muñoz-Castañeda R, Zingg B, Matho KS, Chen X, Wang Q, Foster NN, Li A, Narasimhan A, Hirokawa KE, Huo B, Bannerjee S, Korobkova L, Park CS, Park YG, Bienkowski MS, et al. Cellular anatomy of the mouse primary motor cortex. Nature. 598: 159-166. PMID 34616071 DOI: 10.1038/s41586-021-03970-w  0.596
2021 Sun YC, Chen X, Fischer S, Lu S, Zhan H, Gillis J, Zador AM. Integrating barcoded neuroanatomy with spatial transcriptional profiling enables identification of gene correlates of projections. Nature Neuroscience. PMID 33972801 DOI: 10.1038/s41593-021-00842-4  0.659
2021 Chen S, Loper J, Chen X, Vaughan A, Zador AM, Paninski L. BARcode DEmixing through Non-negative Spatial Regression (BarDensr). Plos Computational Biology. 17: e1008256. PMID 33684106 DOI: 10.1371/journal.pcbi.1008256  0.55
2019 Chen X, Sun YC, Zhan H, Kebschull JM, Fischer S, Matho K, Huang ZJ, Gillis J, Zador AM. High-Throughput Mapping of Long-Range Neuronal Projection Using In Situ Sequencing. Cell. 179: 772-786.e19. PMID 31626774 DOI: 10.1016/J.Cell.2019.09.023  0.731
2017 Chen X, Sun YC, Church GM, Lee JH, Zador AM. Efficient in situ barcode sequencing using padlock probe-based BaristaSeq. Nucleic Acids Research. PMID 29190363 DOI: 10.1093/Nar/Gkx1206  0.604
2015 Chen X, Chalfie M. Regulation of mechanosensation in C. elegans through ubiquitination of the MEC-4 mechanotransduction channel. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 35: 2200-12. PMID 25653375 DOI: 10.1523/Jneurosci.4082-14.2015  0.613
2015 Chen X, Cuadros MD, Chalfie M. Identification of nonviable genes affecting touch sensitivity in Caenorhabditis elegans using neuronally enhanced feeding RNA interference. G3 (Bethesda, Md.). 5: 467-75. PMID 25575561 DOI: 10.1534/G3.114.015776  0.632
2014 Chen X, Chalfie M. Modulation of C. elegans touch sensitivity is integrated at multiple levels. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 34: 6522-36. PMID 24806678 DOI: 10.1523/Jneurosci.0022-14.2014  0.548
2010 Calixto A, Chelur D, Topalidou I, Chen X, Chalfie M. Enhanced neuronal RNAi in C. elegans using SID-1. Nature Methods. 7: 554-9. PMID 20512143 DOI: 10.1038/Nmeth.1463  0.706
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