Zhijia Yuan, Ph.D. - Publications

Affiliations: 
2010 Biomedical Engineering Stony Brook University, Stony Brook, NY, United States 
Area:
Biomedical Engineering, Optics Physics

67 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Pan Y, Li P, Xie S, Tao Y, Chen D, Dai M, Hao H, Huang L, Wang Y, Wang L, Liu Z, Yuan Z. Synthesis, 3D-QSAR analysis and biological evaluation of quinoxaline 1,4-di-N-oxide derivatives as antituberculosis agents. Bioorganic & Medicinal Chemistry Letters. PMID 27426298 DOI: 10.1016/j.bmcl.2016.01.066  0.39
2016 Lu W, Alam MA, Pan Y, Wu J, Wang Z, Yuan Z. A new approach of microalgal biomass pretreatment using deep eutectic solvents for enhanced lipid recovery for biodiesel production. Bioresource Technology. 218: 123-128. PMID 27359060 DOI: 10.1016/j.biortech.2016.05.120  0.385
2016 Wang L, Huang L, Pan Y, Wu Q, Xie S, Yuan Z. Simultaneous determination of aditoprim and its three major metabolites in pigs, broilers, and carp tissues and its application in tissue distribution and depletion studies. Food Additives & Contaminants. Part a, Chemistry, Analysis, Control, Exposure & Risk Assessment. PMID 27310088 DOI: 10.1080/19440049.2016.1200751  0.422
2016 Yuan Z, Pan Y, Cheng R, Sheng L, Wu W, Pan G, Feng Q, Cui W. Doxorubicin-loaded mesoporous silica nanoparticle composite nanofibers for long-term adjustments of tumor apoptosis. Nanotechnology. 27: 245101. PMID 27172065 DOI: 10.1088/0957-4484/27/24/245101  0.385
2016 Zhu Y, Xie S, Dongmei C, Pan Y, Qu W, Wang X, Zhenli L, Dapeng P, Huang L, Tao Y, Yuan Z. Targeted analysis and determination of β-agonists, hormones, glucocorticoid, and psychiatric drugs in feed by liquid chromatography with electrospray ionization tandem mass spectrometry. Journal of Separation Science. PMID 27145483 DOI: 10.1002/jssc.201600011  0.401
2016 Chen D, Yu J, Tao Y, Pan Y, Xie S, Huang L, Peng D, Wang X, Wang Y, Liu Z, Yuan Z. Qualitative screening of veterinary anti-microbial agents in tissues, milk, and eggs of food-producing animals using liquid chromatography coupled with tandem mass spectrometry. Journal of Chromatography. B, Analytical Technologies in the Biomedical and Life Sciences. 1017: 82-88. PMID 26950031 DOI: 10.1016/j.jchromb.2016.02.037  0.402
2016 Peng D, Liao F, Pan Y, Chen D, Liu Z, Wang Y, Yuan Z. Development a monoclonal antibody-based enzyme-linked immunosorbent assay for screening carotenoids in eggs. Food Chemistry. 202: 141-8. PMID 26920278 DOI: 10.1016/j.foodchem.2016.01.123  0.387
2016 Li X, Xie S, Pan Y, Qu W, Tao Y, Chen D, Huang L, Liu Z, Wang Y, Yuan Z. Preparation, characterization and pharmacokinetics of doxycycline hydrochloride and florfenicol polyvinylpyrroliddone microparticle entrapped with hydroxypropyl-β-cyclodextrin inclusion complexes suspension. Colloids and Surfaces. B, Biointerfaces. 141: 634-642. PMID 26918512 DOI: 10.1016/j.colsurfb.2016.02.027  0.377
2016 Huang L, Shi J, Pan Y, Wang L, Chen D, Xie S, Liu Z, Yuan Z. Elimination and Concentration Correlations Between Edible Tissues and Biological Fluids and Hair of Ractopamine in Pigs and Goats Fed with Ractopamine-Medicated Feed. Journal of Agricultural and Food Chemistry. PMID 26883087 DOI: 10.1021/acs.jafc.6b00456  0.399
2016 Peng D, Yang B, Pan Y, Wang Y, Chen D, Liu Z, Yang W, Tao Y, Yuan Z. Development and validation of a sensitive monoclonal antibody-based indirect competitive enzyme-linked immunosorbent assay for the determination of the aflatoxin M1 levels in milk. Toxicon : Official Journal of the International Society On Toxinology. PMID 26867714 DOI: 10.1016/j.toxicon.2016.02.006  0.401
2016 Xie D, Zhang J, Zhu X, Pan Y, Liu H, Yuan Z, Yun Y. An Improved STARFM with Help of an Unmixing-Based Method to Generate High Spatial and Temporal Resolution Remote Sensing Data in Complex Heterogeneous Regions. Sensors (Basel, Switzerland). 16. PMID 26861334 DOI: 10.3390/s16020207  0.421
2016 Pan Y, van den Akker B, Ye L, Ni BJ, Watts S, Reid K, Yuan Z. Unravelling the spatial variation of nitrous oxide emissions from a step-feed plug-flow full scale wastewater treatment plant. Scientific Reports. 6: 20792. PMID 26852718 DOI: 10.1038/srep20792  0.41
2016 Wang L, Huang L, Pan Y, Kuča K, Klímová B, Wu Q, Xie S, Ahmad I, Chen D, Tao Y, Wan D, Liu Z, Yuan Z. Metabolism and Disposition of Aditoprim in Swine, Broilers, Carp and Rats. Scientific Reports. 6: 20370. PMID 26838160 DOI: 10.1038/srep20370  0.427
2016 Peng D, Feng L, Pan Y, Wang Y, Chen D, Wang J, Yuan Z. Development and validation of an indirect competitive enzyme-linked immunosorbent assay for monitoring organoarsenic compounds in edible chicken and pork and feed. Food Chemistry. 197: 821-8. PMID 26617022 DOI: 10.1016/j.foodchem.2015.11.055  0.402
2015 Han W, Pan Y, Wang Y, Chen D, Liu Z, Zhou Q, Feng L, Peng D, Yuan Z. Development of a monoclonal antibody-based indirect competitive enzyme-linked immunosorbent assay for nitroimidazoles in edible animal tissues and feeds. Journal of Pharmaceutical and Biomedical Analysis. 120: 84-91. PMID 26717017 DOI: 10.1016/j.jpba.2015.12.017  0.421
2015 Pan Y, Ye L, van den Akker B, Ganigue R, Musenze RS, Yuan Z. Sludge Drying Lagoon - a Potential Significant Methane Source in Wastewater Treatment Plants. Environmental Science & Technology. PMID 26642353 DOI: 10.1021/acs.est.5b04844  0.381
2015 Huang L, Yin F, Pan Y, Chen D, Li J, Wan D, Liu Z, Yuan Z. Metabolism, Distribution and Elimination of Mequindox in Pigs, Chickens and Rats. Journal of Agricultural and Food Chemistry. PMID 26376954 DOI: 10.1021/acs.jafc.5b02780  0.405
2015 Ni BJ, Pan Y, van den Akker B, Ye L, Yuan Z. Full-Scale Modeling Explaining Large Spatial Variations of Nitrous Oxide Fluxes in a Step-Feed Plug-Flow Wastewater Treatment Reactor. Environmental Science & Technology. 49: 9176-84. PMID 26153721 DOI: 10.1021/acs.est.5b02038  0.403
2015 Wan D, Wang X, Wu Q, Lin P, Pan Y, Sattar A, Huang L, Ahmad I, Zhang Y, Yuan Z. Integrated Transcriptional and Proteomic Analysis of Growth Hormone Suppression Mediated by Trichothecene T-2 toxin in Rat GH3 cells. Toxicological Sciences : An Official Journal of the Society of Toxicology. PMID 26141394 DOI: 10.1093/toxsci/kfv131  0.374
2015 Zhang H, Wang X, Huang L, Pan Y, Li J, Chen D, Cheng G, Hao H, Tao Y, Liu Z, Yuan Z. Correction to deoxidation rates play a critical role in DNA damage mediated by important synthetic drugs, quinoxaline 1,4-dioxides. Chemical Research in Toxicology. 28: 1070. PMID 25875999 DOI: 10.1021/acs.chemrestox.5b00115  0.363
2015 Wang X, Tan Z, Cheng G, Awais I, Huang L, Chen D, Pan Y, Liu Z, Yuan Z. Two-generation reproduction and teratology studies of feeding aditoprim in Wistar rats. Journal of Applied Toxicology : Jat. PMID 25663540 DOI: 10.1002/jat.3121  0.375
2015 Wang X, Tan Z, Pan Y, Ihsan A, Liu Q, Huang L, Cheng G, Chen D, Tao Y, Liu Z, Yuan Z. Safety assessment of aditoprim acute, subchronic toxicity and mutagenicity studies. Journal of Applied Toxicology : Jat. PMID 25663419 DOI: 10.1002/jat.3107  0.398
2015 Wei H, Tao Y, Chen D, Xie S, Pan Y, Liu Z, Huang L, Yuan Z. Development and validation of a multi-residue screening method for veterinary drugs, their metabolites and pesticides in meat using liquid chromatography-tandem mass spectrometry. Food Additives & Contaminants. Part a, Chemistry, Analysis, Control, Exposure & Risk Assessment. 32: 686-701. PMID 25632989 DOI: 10.1080/19440049.2015.1008588  0.393
2015 Wang X, Zhang H, Huang L, Pan Y, Li J, Chen D, Cheng G, Hao H, Tao Y, Liu Z, Yuan Z. Deoxidation rates play a critical role in DNA damage mediated by important synthetic drugs, quinoxaline 1,4-dioxides. Chemical Research in Toxicology. 28: 470-81. PMID 25626015 DOI: 10.1021/tx5004326  0.39
2015 Pan Y, Ni BJ, Lu H, Chandran K, Richardson D, Yuan Z. Evaluating two concepts for the modelling of intermediates accumulation during biological denitrification in wastewater treatment. Water Research. 71: 21-31. PMID 25577690 DOI: 10.1016/J.Watres.2014.12.029  0.392
2014 Li J, Huang L, Pan Y, Chen D, Wang X, Ahmad I, Tao Y, Liu Z, Yuan Z. Tissue depletion of quinocetone and its five major metabolites in pigs, broilers, and carp fed quinocetone premix. Journal of Agricultural and Food Chemistry. 62: 10348-56. PMID 25280481 DOI: 10.1021/jf5042867  0.426
2014 Cheng G, Liu C, Wang X, Ma H, Pan Y, Huang L, Hao H, Dai M, Yuan Z. Structure-function analysis of porcine cytochrome P450 3A29 in the hydroxylation of T-2 toxin as revealed by docking and mutagenesis studies. Plos One. 9: e106769. PMID 25184434 DOI: 10.1371/journal.pone.0106769  0.375
2014 Luo J, Pan YB, Xu L, Zhang H, Yuan Z, Deng Z, Chen R, Que Y. Cultivar evaluation and essential test locations identification for sugarcane breeding in China. Thescientificworldjournal. 2014: 302753. PMID 24982939 DOI: 10.1155/2014/302753  0.376
2014 Xie S, Tao Y, Pan Y, Qu W, Cheng G, Huang L, Chen D, Wang X, Liu Z, Yuan Z. Biodegradable nanoparticles for intracellular delivery of antimicrobial agents. Journal of Controlled Release : Official Journal of the Controlled Release Society. 187: 101-17. PMID 24878179 DOI: 10.1016/j.jconrel.2014.05.034  0.355
2014 Li J, Huang L, Wang X, Pan Y, Liu Z, Chen D, Tao Y, Wu Q, Yuan Z. Metabolic disposition and excretion of quinocetone in rats, pigs, broilers, and carp. Food and Chemical Toxicology : An International Journal Published For the British Industrial Biological Research Association. 69: 109-19. PMID 24727229 DOI: 10.1016/j.fct.2014.04.004  0.372
2014 Zhou Q, Peng D, Wang Y, Pan Y, Wan D, Zhang X, Yuan Z. A novel hapten and monoclonal-based enzyme-linked immunosorbent assay for sulfonamides in edible animal tissues. Food Chemistry. 154: 52-62. PMID 24518315 DOI: 10.1016/j.foodchem.2014.01.016  0.423
2014 Tao Y, Zhu F, Chen D, Wei H, Pan Y, Wang X, Liu Z, Huang L, Wang Y, Yuan Z. Evaluation of matrix solid-phase dispersion (MSPD) extraction for multi-fenicols determination in shrimp and fish by liquid chromatography-electrospray ionisation tandem mass spectrometry. Food Chemistry. 150: 500-6. PMID 24360482 DOI: 10.1016/j.foodchem.2013.11.013  0.408
2014 Wan D, Huang L, Pan Y, Wu Q, Chen D, Tao Y, Wang X, Liu Z, Li J, Wang L, Yuan Z. Metabolism, distribution, and excretion of deoxynivalenol with combined techniques of radiotracing, high-performance liquid chromatography ion trap time-of-flight mass spectrometry, and online radiometric detection. Journal of Agricultural and Food Chemistry. 62: 288-96. PMID 24341775 DOI: 10.1021/jf4047946  0.42
2014 Wang X, Wang W, Cheng G, Huang L, Chen D, Tao Y, Pan Y, Hao H, Wu Q, Wan D, Liu Z, Wang Y, Yuan Z. High risk of embryo-fetal toxicity: placental transfer of T-2 toxin and its major metabolite HT-2 toxin in BeWo cells. Toxicological Sciences : An Official Journal of the Society of Toxicology. 137: 168-78. PMID 24136189 DOI: 10.1093/toxsci/kft233  0.366
2013 Chen D, Li X, Tao Y, Pan Y, Wu Q, Liu Z, Peng D, Wang X, Huang L, Wang Y, Yuan Z. Development of a liquid chromatography-tandem mass spectrometry with ultrasound-assisted extraction method for the simultaneous determination of sudan dyes and their metabolites in the edible tissues and eggs of food-producing animals. Journal of Chromatography. B, Analytical Technologies in the Biomedical and Life Sciences. 939: 45-50. PMID 24096205 DOI: 10.1016/j.jchromb.2013.08.028  0.407
2013 Chen D, Cao X, Tao Y, Wu Q, Pan Y, Peng D, Liu Z, Huang L, Wang Y, Wang X, Yuan Z. Development of a liquid chromatography-tandem mass spectrometry with ultrasound-assisted extraction and auto solid-phase clean-up method for the determination of Fusarium toxins in animal derived foods. Journal of Chromatography. A. 1311: 21-9. PMID 24011505 DOI: 10.1016/j.chroma.2013.08.062  0.4
2013 Pan Y, Ni BJ, Yuan Z. Modeling electron competition among nitrogen oxides reduction and N2O accumulation in denitrification. Environmental Science & Technology. 47: 11083-91. PMID 24001217 DOI: 10.1021/es402348n  0.387
2013 Pan Y, Ye L, Yuan Z. Effect of H2S on N2O reduction and accumulation during denitrification by methanol utilizing denitrifiers. Environmental Science & Technology. 47: 8408-15. PMID 23802609 DOI: 10.1021/es401632r  0.381
2013 Ihsan A, Wang X, Zhang W, Tu H, Wang Y, Huang L, Iqbal Z, Cheng G, Pan Y, Liu Z, Tan Z, Zhang Y, Yuan Z. Genotoxicity of quinocetone, cyadox and olaquindox in vitro and in vivo. Food and Chemical Toxicology : An International Journal Published For the British Industrial Biological Research Association. 59: 207-14. PMID 23774262 DOI: 10.1016/j.fct.2013.06.008  0.382
2013 Pan Y, Ni BJ, Bond PL, Ye L, Yuan Z. Electron competition among nitrogen oxides reduction during methanol-utilizing denitrification in wastewater treatment. Water Research. 47: 3273-81. PMID 23622815 DOI: 10.1016/j.watres.2013.02.054  0.377
2012 Tao Y, Chen D, Yu H, Huang L, Liu Z, Cao X, Yan C, Pan Y, Liu Z, Yuan Z. Simultaneous determination of 15 aminoglycoside(s) residues in animal derived foods by automated solid-phase extraction and liquid chromatography-tandem mass spectrometry. Food Chemistry. 135: 676-83. PMID 22868145 DOI: 10.1016/j.foodchem.2012.04.086  0.409
2012 Ren H, Du C, Yuan Z, Park K, Volkow ND, Pan Y. Cocaine-induced cortical microischemia in the rodent brain: clinical implications. Molecular Psychiatry. 17: 1017-25. PMID 22124273 DOI: 10.1038/Mp.2011.160  0.633
2012 Ren H, Luo Z, Yuan Z, Pan Y, Du C. Multichannel optical brain imaging to separate cerebral vascular, tissue metabolic, and neuronal effects of cocaine Proceedings of Spie. 8207: 820755. DOI: 10.1117/12.910160  0.752
2012 Yuan Z, Keng K, Pan R, Ren H, Du C, Kim J, Pan Y. Characterization of dynamic physiology of the bladder by optical coherence tomography Proceedings of Spie. 8230. DOI: 10.1117/12.909601  0.677
2011 Yuan Z, Luo Z, Volkow ND, Pan Y, Du C. Imaging separation of neuronal from vascular effects of cocaine on rat cortical brain in vivo. Neuroimage. 54: 1130-9. PMID 20804849 DOI: 10.1016/J.Neuroimage.2010.08.045  0.727
2010 Ren H, Yuan Z, Waltzer W, Shroyer K, Pan Y. Enhancing detection of bladder carcinoma in situ by 3-dimensional optical coherence tomography. The Journal of Urology. 184: 1499-506. PMID 20723922 DOI: 10.1016/J.Juro.2010.05.087  0.655
2010 Yuan Z, Zakhaleva J, Ren H, Liu J, Chen W, Pan Y. Noninvasive and high-resolution optical monitoring of healing of diabetic dermal excisional wounds implanted with biodegradable in situ gelable hydrogels. Tissue Engineering. Part C, Methods. 16: 237-47. PMID 19496703 DOI: 10.1089/Ten.Tec.2009.0152  0.621
2010 Luo Z, Yuan Z, Pan Y, Du C. Simultaneous Imaging of Cortical Blood Flow and Oxygenation Change or Cellular Calcium Dynamics Using Dual-Wavelength Laser Speckle Contrast Imaging Ieee Transactions On Biomedical Engineering. DOI: 10.1364/Biomed.2010.Bwa6  0.71
2010 Yuan Z, Luo Z, Ren H, Du C, Pan Y. Doppler Optical Coherence Tomography for Flow Imaging with Optimized Digital Frequency Ramping Method Ieee Transactions On Biomedical Engineering. DOI: 10.1364/Biomed.2010.Bsud14  0.756
2010 Ren H, Yuan Z, Waltzer WC, Liu J, Miles RA, Pan Y. Enhancing Diagnosis of Bladder Cancer by 2-D and 3-D Optical Coherence Tomography (OCT) Ieee Transactions On Biomedical Engineering. DOI: 10.1364/Biomed.2010.Bsuc4  0.643
2009 Yuan Z, Chen B, Ren H, Pan Y. On the possibility of time-lapse ultrahigh-resolution optical coherence tomography for bladder cancer grading. Journal of Biomedical Optics. 14: 050502. PMID 19895098 DOI: 10.1117/1.3223246  0.662
2009 Ren H, Waltzer WC, Bhalla R, Liu J, Yuan Z, Lee CS, Darras F, Schulsinger D, Adler HL, Kim J, Mishail A, Pan Y. Diagnosis of bladder cancer with microelectromechanical systems-based cystoscopic optical coherence tomography. Urology. 74: 1351-7. PMID 19660795 DOI: 10.1016/J.Urology.2009.04.090  0.651
2009 Luo Z, Yuan Z, Pan Y, Du C. Simultaneous imaging of cortical hemodynamics and blood oxygenation change during cerebral ischemia using dual-wavelength laser speckle contrast imaging. Optics Letters. 34: 1480-2. PMID 19412312 DOI: 10.1364/Ol.34.001480  0.719
2009 Luo Z, Yuan Z, Tully M, Pan Y, Du C. Quantification of cocaine-induced cortical blood flow changes using laser speckle contrast imaging and Doppler optical coherence tomography. Applied Optics. 48: D247-55. PMID 19340115 DOI: 10.1364/Ao.48.00D247  0.726
2009 Yuan Z, Luo ZC, Ren HG, Du CW, Pan Y. A digital frequency ramping method for enhancing Doppler flow imaging in Fourier-domain optical coherence tomography. Optics Express. 17: 3951-63. PMID 19259236 DOI: 10.1364/Oe.17.003951  0.685
2009 Silva MR, Yuan Z, Kim JH, Wang Z, Hoyos M, Pan Y, Gouldstone A. Spherical indentation of lungs: Experiments, modeling and sub-surface imaging Journal of Materials Research. 24: 1156-1166. DOI: 10.1557/Jmr.2009.0148  0.508
2008 Yuan Z, Wang Z, Pan R, Liu J, Cohen H, Pan Y. High-resolution imaging diagnosis and staging of bladder cancer: comparison between optical coherence tomography and high-frequency ultrasound. Journal of Biomedical Optics. 13: 054007. PMID 19021387 DOI: 10.1117/1.2978059  0.574
2008 Luo Z, Wang Z, Yuan Z, Du C, Pan Y. Optical coherence Doppler tomography quantifies laser speckle contrast imaging for blood flow imaging in the rat cerebral cortex. Optics Letters. 33: 1156-8. PMID 18483544 DOI: 10.1364/Ol.33.001156  0.729
2008 Wang Z, Pan H, Yuan Z, Liu J, Chen W, Pan Y. Assessment of dermal wound repair after collagen implantation with optical coherence tomography. Tissue Engineering. Part C, Methods. 14: 35-45. PMID 18454644 DOI: 10.1089/Tec.2007.0285  0.526
2008 Yuan Z, Zakehaleva J, Ren H, Chen W, Pan Y. In vivo Optical Coherence Tomography of Mouse Skin Wound Healing Ieee Transactions On Biomedical Engineering. DOI: 10.1364/Biomed.2008.Pdpbtug2  0.639
2008 Yuan Z, Wang Z, Liu J, Pan Y. Optical Coherence Tomography versus High-Frequency Ultrasound for Diagnosis and Staging of Bladder Cancer Ieee Transactions On Biomedical Engineering. DOI: 10.1364/Biomed.2008.Bwd4  0.531
2008 Luo Z, Wang Z, Yuan Z, Du C, Pan Y. Combining Laser Doppler Speckle Contrast Imaging and Optical Coherence Tomography for Quantitative Imaging of Cortical Blood Flow in Rat Brain Ieee Transactions On Biomedical Engineering. DOI: 10.1364/Biomed.2008.Bwc2  0.733
2008 YUAN Z, REN H, WALTZER W, KIM J, LIU J, JIA K, XIE H, PAN Y. OPTICAL COHERENCE TOMOGRAPHY FOR BLADDER CANCER DIAGNOSIS: FROM ANIMAL STUDY TO CLINICAL DIAGNOSIS Journal of Innovative Optical Health Sciences. 1: 125-140. DOI: 10.1142/S1793545808000145  0.675
2007 Wang Z, Lee CS, Waltzer WC, Liu J, Xie H, Yuan Z, Pan Y. In vivo bladder imaging with microelectromechanical-systems-based endoscopic spectral domain optical coherence tomography. Journal of Biomedical Optics. 12: 034009. PMID 17614717 DOI: 10.1117/1.2749744  0.574
2007 Wang Z, Lee CSD, Waltzer WC, Yuan Z, Pan Y. Interpixel-Shifted Endoscopic Optical Coherence Tomography For In Vivo Bladder Cancer Diagnosis International Journal of Image and Graphics. 7: 105-117. DOI: 10.1142/S021946780700257X  0.582
2006 Wang Z, Yuan Z, Wang H, Pan Y. Increasing the imaging depth of spectral-domain OCT by using interpixel shift technique. Optics Express. 14: 7014-23. PMID 19529072 DOI: 10.1364/Oe.14.007014  0.563
2006 Wang Z, Wang H, Yuan Z, Wu Z, Pan Y. Endoscopic Fourier Domain Optical Coherence Tomography for Bladder Cancer Diagnosis Biosilico. DOI: 10.1364/Bio.2006.Tui29  0.555
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