Emma Timmins-Schiffman - Publications

University of Washington, Seattle, Seattle, WA 
marine conservation genetics

22 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Timmins-Schiffman E, White SJ, Thompson RE, Vadopalas B, Eudeline B, Nunn BL, Roberts SB. Coupled microbiome analyses highlights relative functional roles of bacteria in a bivalve hatchery. Environmental Microbiome. 16: 7. PMID 33902744 DOI: 10.1186/s40793-021-00376-z  0.6
2021 Tisthammer KH, Timmins-Schiffman E, Seneca FO, Nunn BL, Richmond RH. Physiological and molecular responses of lobe coral indicate nearshore adaptations to anthropogenic stressors. Scientific Reports. 11: 3423. PMID 33564085 DOI: 10.1038/s41598-021-82569-7  0.6
2020 Trigg SA, Mitchell KR, Thompson RE, Eudeline B, Vadopalas B, Timmins-Schiffman EB, Roberts SB. Temporal proteomic profiling reveals insight into critical developmental processes and temperature-influenced physiological response differences in a bivalve mollusc. Bmc Genomics. 21: 723. PMID 33076839 DOI: 10.1186/s12864-020-07127-3  0.48
2020 Timmins-Schiffman E, Guzmán JM, Elliott Thompson R, Vadopalas B, Eudeline B, Roberts SB. Larval Geoduck (Panopea generosa) Proteomic Response to Ciliates. Scientific Reports. 10: 6042. PMID 32269285 DOI: 10.1038/S41598-020-63218-X  0.48
2020 Timmins-Schiffman E, Guzmán JM, Elliott Thompson R, Vadopalas B, Eudeline B, Roberts SB. Dynamic response in the larval geoduck () proteome to elevated CO. Ecology and Evolution. 10: 185-197. PMID 31988722 DOI: 10.1002/Ece3.5885  0.48
2019 Krayushkina D, Timmins-Schiffman E, Faux J, May DH, Riffle M, Harvey HR, Nunn BL. Growth phase proteomics of the heterotrophic marine bacterium Ruegeria pomeroyi. Scientific Data. 6: 303. PMID 31796751 DOI: 10.1038/S41597-019-0308-Y  0.6
2019 Mikan MP, Harvey HR, Timmins-Schiffman E, Riffle M, May DH, Salter I, Noble WS, Nunn BL. Metaproteomics reveal that rapid perturbations in organic matter prioritize functional restructuring over taxonomy in western Arctic Ocean microbiomes. The Isme Journal. PMID 31492961 DOI: 10.1038/S41396-019-0503-Z  0.6
2019 Spencer LH, Horwith M, Lowe AT, Venkataraman YR, Timmins-Schiffman E, Nunn BL, Roberts SB. Pacific geoduck (Panopea generosa) resilience to natural pH variation. Comparative Biochemistry and Physiology. Part D, Genomics & Proteomics. 30: 91-101. PMID 30818101 DOI: 10.1016/J.Cbd.2019.01.010  0.6
2018 Timmins-Schiffman E, Mikan MP, Ting YS, Harvey HR, Nunn BL. MS analysis of a dilution series of bacteria:phytoplankton to improve detection of low abundance bacterial peptides. Scientific Reports. 8: 9276. PMID 29915279 DOI: 10.1038/S41598-018-27650-4  0.6
2017 Riffle M, May DH, Timmins-Schiffman E, Mikan MP, Jaschob D, Noble WS, Nunn BL. MetaGOmics: A Web-Based Tool for Peptide-Centric Functional and Taxonomic Analysis of Metaproteomics Data. Proteomes. 6. PMID 29280960 DOI: 10.3390/Proteomes6010002  0.6
2017 Smith MC, Timmins-Schiffman E, Coton M, Coton E, Hymery N, Nunn BL, Madec S. Differential impacts of individual and combined exposures of deoxynivalenol and zearalenone on the HepaRG human hepatic cell proteome. Journal of Proteomics. 173: 89-98. PMID 29208510 DOI: 10.1016/J.Jprot.2017.11.025  0.6
2017 Timmins-Schiffman EB, Crandall GA, Vadopalas B, Riffle ME, Nunn BL, Roberts S. Integrating discovery-driven proteomics and selected reaction monitoring to develop a non-invasive assay for geoduck reproductive maturation. Journal of Proteome Research. PMID 28730805 DOI: 10.1021/Acs.Jproteome.7B00288  0.6
2016 Timmins-Schiffman E, May DH, Mikan M, Riffle M, Frazar C, Harvey HR, Noble WS, Nunn BL. Critical decisions in metaproteomics: achieving high confidence protein annotations in a sea of unknowns. The Isme Journal. PMID 27824341 DOI: 10.1038/Ismej.2016.132  0.6
2016 May DH, Timmins-Schiffman E, Mikan MP, Harvey HR, Borenstein E, Nunn BL, Noble WS. An alignment-free 'metapeptide' strategy for metaproteomic characterization of microbiome samples using shotgun metagenomic sequencing. Journal of Proteome Research. PMID 27396978 DOI: 10.1021/Acs.Jproteome.6B00239  0.56
2016 Boyd PW, Dillingham PW, Mcgraw CM, Armstrong EA, Cornwall CE, Feng YY, Hurd CL, Gault-Ringold M, Roleda MY, Timmins-Schiffman E, Nunn BL. Physiological responses of a Southern Ocean diatom to complex future ocean conditions Nature Climate Change. 6: 207-213. DOI: 10.1038/Nclimate2811  0.56
2015 Winans GA, Gayeski N, Timmins-Schiffman E. All dam-affected trout populations are not alike: fine scale geographic variability in resident rainbow trout in Icicle Creek, WA, USA Conservation Genetics. 16: 301-315. DOI: 10.1007/S10592-014-0659-Z  0.56
2014 Nunn BL, Slattery KV, Cameron KA, Timmins-Schiffman E, Junge K. Proteomics of Colwellia psychrerythraea at subzero temperatures - a life with limited movement, flexible membranes and vital DNA repair. Environmental Microbiology. PMID 25471130 DOI: 10.1111/1462-2920.12691  0.56
2014 Timmins-Schiffman E, Coffey WD, Hua W, Nunn BL, Dickinson GH, Roberts SB. Shotgun proteomics reveals physiological response to ocean acidification in Crassostrea gigas. Bmc Genomics. 15: 951. PMID 25362893 DOI: 10.1186/1471-2164-15-951  0.56
2013 Timmins-Schiffman E, Nunn BL, Goodlett DR, Roberts SB. Shotgun proteomics as a viable approach for biological discovery in the Pacific oyster. Conservation Physiology. 1: cot009. PMID 27293593 DOI: 10.1093/Conphys/Cot009  0.56
2013 Timmins-Schiffman EB, Friedman CS, Metzger DC, White SJ, Roberts SB. Genomic resource development for shellfish of conservation concern. Molecular Ecology Resources. 13: 295-305. PMID 23280275 DOI: 10.1111/1755-0998.12052  0.56
2013 Timmins-Schiffman E, O'Donnell MJ, Friedman CS, Roberts SB. Elevated pCO2 causes developmental delay in early larval Pacific oysters, Crassostrea gigas Marine Biology. 160: 1973-1982. DOI: 10.1007/S00227-012-2055-X  0.56
2012 Timmins-Schiffman E, Roberts S. Characterization of genes involved in ceramide metabolism in the Pacific oyster (Crassostrea gigas). Bmc Research Notes. 5: 502. PMID 22974230 DOI: 10.1186/1756-0500-5-502  0.56
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