Deron E. Burkepile, Ph.D. - Publications

Ecology, Evolution, and Marine Biology University of California, Santa Barbara, Santa Barbara, CA, United States 
Community ecology, coral reef ecology, trophic ecology

62 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Adam TC, Burkepile DE, Holbrook SJ, Carpenter RC, Claudet J, Loiseau C, Thiault L, Brooks AJ, Washburn L, Schmitt RJ. Landscape-scale patterns of nutrient enrichment in a coral reef ecosystem: implications for coral to algae phase shifts. Ecological Applications : a Publication of the Ecological Society of America. e2227. PMID 32918509 DOI: 10.1002/eap.2227  0.84
2020 Scott JJ, Adam TC, Duran A, Burkepile DE, Rasher DB. Intestinal microbes: an axis of functional diversity among large marine consumers. Proceedings. Biological Sciences. 287: 20192367. PMID 32228407 DOI: 10.1098/rspb.2019.2367  0.88
2020 Donovan MK, Adam TC, Shantz AA, Speare KE, Munsterman KS, Rice MM, Schmitt RJ, Holbrook SJ, Burkepile DE. Nitrogen pollution interacts with heat stress to increase coral bleaching across the seascape. Proceedings of the National Academy of Sciences of the United States of America. PMID 32094188 DOI: 10.1073/pnas.1915395117  1
2019 Rice MM, Maher RL, Vega Thurber R, Burkepile DE. Different nitrogen sources speed recovery from corallivory and uniquely alter the microbiome of a reef-building coral. Peerj. 7: e8056. PMID 31741802 DOI: 10.7717/peerj.8056  0.72
2019 Klinges JG, Rosales SM, McMinds R, Shaver EC, Shantz AA, Peters EC, Eitel M, Wörheide G, Sharp KH, Burkepile DE, Silliman BR, Thurber RLV. Correction: Phylogenetic, genomic, and biogeographic characterization of a novel and ubiquitous marine invertebrate-associated Rickettsiales parasite, Candidatus Aquarickettsia rohweri, gen. nov., sp. nov. The Isme Journal. PMID 31551528 DOI: 10.1038/s41396-019-0509-6  1
2019 Klinges JG, Rosales SM, McMinds R, Shaver EC, Shantz AA, Peters EC, Eitel M, Wörheide G, Sharp KH, Burkepile DE, Silliman BR, Vega Thurber RL. Phylogenetic, genomic, and biogeographic characterization of a novel and ubiquitous marine invertebrate-associated Rickettsiales parasite, Candidatus Aquarickettsia rohweri, gen. nov., sp. nov. The Isme Journal. PMID 31384012 DOI: 10.1038/s41396-019-0482-0  1
2019 Speare KE, Duran A, Miller MW, Burkepile DE. Sediment associated with algal turfs inhibits the settlement of two endangered coral species. Marine Pollution Bulletin. 144: 189-195. PMID 31179987 DOI: 10.1016/j.marpolbul.2019.04.066  0.88
2019 Peters JR, Reed DC, Burkepile DE. Climate and fishing drive regime shifts in consumer-mediated nutrient cycling in kelp forests. Global Change Biology. PMID 31119829 DOI: 10.1111/gcb.14706  0.56
2019 Maher RL, Rice MM, McMinds R, Burkepile DE, Vega Thurber R. Multiple stressors interact primarily through antagonism to drive changes in the coral microbiome. Scientific Reports. 9: 6834. PMID 31048787 DOI: 10.1038/s41598-019-43274-8  0.72
2019 Ruttenberg BI, Adam TC, Duran A, Burkepile DE. Identity of coral reef herbivores drives variation in ecological processes over multiple spatial scales. Ecological Applications : a Publication of the Ecological Society of America. e01893. PMID 31026114 DOI: 10.1002/eap.1893  0.88
2018 Rodriguez-Casariego JA, Ladd MC, Shantz AA, Lopes C, Cheema MS, Kim B, Roberts SB, Fourqurean JW, Ausio J, Burkepile DE, Eirin-Lopez JM. Coral epigenetic responses to nutrient stress: Histone H2A.X phosphorylation dynamics and DNA methylation in the staghorn coral . Ecology and Evolution. 8: 12193-12207. PMID 30598811 DOI: 10.1002/ece3.4678  1
2018 Koerner SE, Smith MD, Burkepile DE, Hanan NP, Avolio ML, Collins SL, Knapp AK, Lemoine NP, Forrestel EJ, Eby S, Thompson DI, Aguado-Santacruz GA, Anderson JP, Anderson TM, Angassa A, et al. Change in dominance determines herbivore effects on plant biodiversity. Nature Ecology & Evolution. PMID 30374174 DOI: 10.1038/s41559-018-0696-y  0.96
2018 Shaver EC, Burkepile DE, Silliman BR. Publisher Correction: Local management actions can increase coral resilience to thermally-induced bleaching. Nature Ecology & Evolution. 2: 1189. PMID 29930357 DOI: 10.1038/s41559-018-0609-0  0.32
2018 Shaver EC, Burkepile DE, Silliman BR. Local management actions can increase coral resilience to thermally-induced bleaching. Nature Ecology & Evolution. 2: 1075-1079. PMID 29915342 DOI: 10.1038/s41559-018-0589-0  0.32
2017 Allgeier JE, Adam TC, Burkepile DE. The importance of individual and species-level traits for trophic niches among herbivorous coral reef fishes. Proceedings. Biological Sciences. 284. PMID 28615499 DOI: 10.1098/rspb.2017.0307  0.84
2017 Lemoine NP, Doublet D, Salminen JP, Burkepile DE, Parker JD. Responses of plant phenology, growth, defense, and reproduction to interactive effects of warming and insect herbivory. Ecology. PMID 28403543 DOI: 10.1002/ecy.1855  0.96
2017 Lemoine NP, Burkepile DE, Parker JD. Insect herbivores increase mortality and reduce tree seedling growth of some species in temperate forest canopy gaps. Peerj. 5: e3102. PMID 28344904 DOI: 10.7717/peerj.3102  0.96
2017 Burkepile DE, Parker JD. Recent advances in plant-herbivore interactions. F1000research. 6: 119. PMID 28232868 DOI: 10.12688/f1000research.10313.1  0.96
2017 Allgeier JE, Burkepile DE, Layman CA. Animal pee in the sea: consumer-mediated nutrient dynamics in the world's changing oceans. Global Change Biology. PMID 28217892 DOI: 10.1111/gcb.13625  0.52
2016 Shaver EC, Shantz AA, McMinds R, Burkepile DE, Vega Thurber RL, Silliman BR. Effects of predation and nutrient enrichment on the success and microbiome of a foundational coral. Ecology. PMID 28027580 DOI: 10.1002/ecy.1709  1
2016 Catano LB, Barton MB, Boswell KM, Burkepile DE. Predator identity and time of day interact to shape the risk-reward trade-off for herbivorous coral reef fishes. Oecologia. PMID 28005174 DOI: 10.1007/s00442-016-3794-z  0.68
2016 Duran A, Collado-Vides L, Burkepile DE. Seasonal regulation of herbivory and nutrient effects on macroalgal recruitment and succession in a Florida coral reef. Peerj. 4: e2643. PMID 27833810 DOI: 10.7717/peerj.2643  0.88
2016 Zaneveld JR, Burkepile DE, Shantz AA, Pritchard CE, McMinds R, Payet JP, Welsh R, Correa AM, Lemoine NP, Rosales S, Fuchs C, Maynard JA, Thurber RV. Overfishing and nutrient pollution interact with temperature to disrupt coral reefs down to microbial scales. Nature Communications. 7: 11833. PMID 27270557 DOI: 10.1038/ncomms11833  1
2016 Lemoine NP, Burkepile DE, Parker JD. Quantifying Differences Between Native and Introduced Species. Trends in Ecology & Evolution. PMID 26965001 DOI: 10.1016/j.tree.2016.02.008  1
2015 Shantz AA, Ladd MC, Schrack E, Burkepile DE. Fish-derived nutrient hotspots shape coral reef benthic communities. Ecological Applications : a Publication of the Ecological Society of America. 25: 2142-52. PMID 26910945  1
2015 Welsh RM, Zaneveld JR, Rosales SM, Payet JP, Burkepile DE, Thurber RV. Bacterial predation in a marine host-associated microbiome. The Isme Journal. PMID 26613338 DOI: 10.1038/ismej.2015.219  1
2015 Shantz AA, Lemoine NP, Burkepile DE. Nutrient loading alters the performance of key nutrient exchange mutualisms. Ecology Letters. PMID 26549314 DOI: 10.1111/ele.12538  1
2015 Catano LB, Rojas MC, Malossi RJ, Peters JR, Heithaus MR, Fourqurean JW, Burkepile DE. Reefscapes of fear: predation risk and reef heterogeneity interact to shape herbivore foraging behavior. The Journal of Animal Ecology. PMID 26332988 DOI: 10.1111/1365-2656.12440  1
2015 Adam TC, Kelley M, Ruttenberg BI, Burkepile DE. Resource partitioning along multiple niche axes drives functional diversity in parrotfishes on Caribbean coral reefs. Oecologia. PMID 26245147 DOI: 10.1007/s00442-015-3406-3  1
2015 Catano LB, Gunn BK, Kelley MC, Burkepile DE. Predation risk, resource quality, and reef structural complexity shape territoriality in a coral reef herbivore. Plos One. 10: e0118764. PMID 25714431 DOI: 10.1371/journal.pone.0118764  1
2015 Adam TC, Burkepile DE, Ruttenberg BI, Paddack MJ. Herbivory and the resilience of Caribbean coral reefs: Knowledge gaps and implications for management Marine Ecology Progress Series. 520: 1-20. DOI: 10.3354/meps11170  1
2014 Payet JP, McMinds R, Burkepile DE, Vega Thurber RL. Unprecedented evidence for high viral abundance and lytic activity in coral reef waters of the South Pacific Ocean. Frontiers in Microbiology. 5: 493. PMID 25295032 DOI: 10.3389/fmicb.2014.00493  1
2014 Shantz AA, Burkepile DE. Context-dependent effects of nutrient loading on the coral-algal mutualism. Ecology. 95: 1995-2005. PMID 25163130 DOI: 10.1890/13-1407.1  1
2014 Koerner SE, Burkepile DE, Fynn RW, Burns CE, Eby S, Govender N, Hagenah N, Matchett KJ, Thompson DI, Wilcox KR, Collins SL, Kirkman KP, Knapp AK, Smith MD. Plant community response to loss of large herbivores differs between North American and South African savanna grasslands. Ecology. 95: 808-16. PMID 24933802 DOI: 10.1890/13-1828.1  1
2014 Lemoine NP, Burkepile DE, Parker JD. Variable effects of temperature on insect herbivory. Peerj. 2: e376. PMID 24860701 DOI: 10.7717/peerj.376  1
2014 Eby S, Burkepile DE, Fynn RW, Burns CE, Govender N, Hagenah N, Koerner SE, Matchett KJ, Thompson DI, Wilcox KR, Collins SL, Kirkman KP, Knapp AK, Smith MD. Loss of a large grazer impacts savanna grassland plant communities similarly in North America and South Africa. Oecologia. 175: 293-303. PMID 24554031 DOI: 10.1007/s00442-014-2895-9  1
2014 Lemoine NP, Giery ST, Burkepile DE. Differing nutritional constraints of consumers across ecosystems. Oecologia. 174: 1367-76. PMID 24380968 DOI: 10.1007/s00442-013-2860-z  1
2014 Vega Thurber RL, Burkepile DE, Fuchs C, Shantz AA, McMinds R, Zaneveld JR. Chronic nutrient enrichment increases prevalence and severity of coral disease and bleaching. Global Change Biology. 20: 544-54. PMID 24277207 DOI: 10.1111/gcb.12450  1
2014 Catano LB, Shantz AA, Burkepile DE. Predation risk, competition, and territorial damselfishes as drivers of herbivore foraging on Caribbean coral reefs Marine Ecology Progress Series. 511: 193-207. DOI: 10.3354/meps10921  1
2014 Kirkman KP, Collins SL, Smith MD, Knapp AK, Burkepile DE, Burns CE, Fynn RWS, Hagenah N, Koerner SE, Matchett KJ, Thompson DI, Wilcox KR, Wragg PD. Responses to fire differ between South African and North American grassland communities Journal of Vegetation Science. 25: 793-804. DOI: 10.1111/jvs.12130  1
2013 Langille MG, Zaneveld J, Caporaso JG, McDonald D, Knights D, Reyes JA, Clemente JC, Burkepile DE, Vega Thurber RL, Knight R, Beiko RG, Huttenhower C. Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences. Nature Biotechnology. 31: 814-21. PMID 23975157 DOI: 10.1038/nbt.2676  1
2013 Burkepile DE, Allgeier JE, Shantz AA, Pritchard CE, Lemoine NP, Bhatti LH, Layman CA. Nutrient supply from fishes facilitates macroalgae and suppresses corals in a Caribbean coral reef ecosystem. Scientific Reports. 3: 1493. PMID 23512216 DOI: 10.1038/srep01493  1
2013 Burkepile DE, Burns CE, Tambling CJ, Amendola E, Buis GM, Govender N, Nelson V, Thompson DI, Zinn AD, Smith MD. Habitat selection by large herbivores in a southern African savanna: The relative roles of bottom-up and top-down forces Ecosphere. 4. DOI: 10.1890/ES13-00078.1  1
2013 Lemoine NP, Drews WA, Burkepile DE, Parker JD. Increased temperature alters feeding behavior of a generalist herbivore Oikos. 122: 1669-1678. DOI: 10.1111/j.1600-0706.2013.00457.x  1
2013 Burkepile DE. Comparing aquatic and terrestrial grazing ecosystems: Is the grass really greener? Oikos. 122: 306-312. DOI: 10.1111/j.1600-0706.2012.20716.x  1
2012 Lemoine NP, Burkepile DE. Temperature-induced mismatches between consumption and metabolism reduce consumer fitness. Ecology. 93: 2483-9. PMID 23236919 DOI: 10.1890/12-0375.1  1
2012 Vega Thurber R, Burkepile DE, Correa AM, Thurber AR, Shantz AA, Welsh R, Pritchard C, Rosales S. Macroalgae decrease growth and alter microbial community structure of the reef-building coral, Porites astreoides. Plos One. 7: e44246. PMID 22957055 DOI: 10.1371/journal.pone.0044246  1
2012 Parker JD, Burkepile DE, Lajeunesse MJ, Lind EM. Phylogenetic isolation increases plant success despite increasing susceptibility to generalist herbivores Diversity and Distributions. 18: 1-9. DOI: 10.1111/j.1472-4642.2011.00806.x  1
2012 Knapp AK, Hoover DL, Blair JM, Buis G, Burkepile DE, Chamberlain A, Collins SL, Fynn RWS, Kirkman KP, Smith MD, Blake D, Govender N, O'Neal P, Schreck T, Zinn A. A test of two mechanisms proposed to optimize grassland aboveground primary productivity in response to grazing Journal of Plant Ecology. 5: 357-365. DOI: 10.1093/jpe/rts020  1
2012 Burkepile DE. Context-dependent corallivory by parrotfishes in a Caribbean reef ecosystem Coral Reefs. 31: 111-120. DOI: 10.1007/s00338-011-0824-5  1
2011 Burkepile DE, Hay ME. Feeding complementarity versus redundancy among herbivorous fishes on a Caribbean reef Coral Reefs. 30: 351-362. DOI: 10.1007/s00338-011-0726-6  1
2010 Burkepile DE, Hay ME. Impact of herbivore identity on algal succession and coral growth on a Caribbean reef. Plos One. 5: e8963. PMID 20126450 DOI: 10.1371/journal.pone.0008963  1
2009 Burkepile DE, Hay ME. Nutrient versus herbivore control of macroalgal community development and coral growth on a Caribbean reef Marine Ecology Progress Series. 389: 71-84. DOI: 10.3354/meps08142  1
2009 Buis GM, Blair JM, Burkepile DE, Burns CE, Chamberlain AJ, Chapman PL, Collins SL, Fynn RWS, Govender N, Kirkman KP, Smith MD, Knapp AK. Controls of aboveground net primary production in mesic savanna grasslands: An inter-hemispheric comparison Ecosystems. 12: 982-995. DOI: 10.1007/s10021-009-9273-1  1
2008 Burkepile DE, Hay ME. Herbivore species richness and feeding complementarity affect community structure and function on a coral reef. Proceedings of the National Academy of Sciences of the United States of America. 105: 16201-6. PMID 18845686 DOI: 10.1073/pnas.0801946105  1
2007 Burkepile DE, Hay ME. Predator release of the gastropod Cyphoma gibbosum increases predation on gorgonian corals. Oecologia. 154: 167-73. PMID 17636334 DOI: 10.1007/s00442-007-0801-4  1
2007 Parker JD, Burkepile DE, Collins DO, Kubanek J, Hay ME. Stream mosses as chemically-defended refugia for freshwater macroinvertebrates Oikos. 116: 302-312. DOI: 10.1111/j.2007.0030-1299.15289.x  1
2006 Burkepile DE, Hay ME. Herbivore vs. nutrient control of marine primary producers: context-dependent effects. Ecology. 87: 3128-39. PMID 17249237 DOI: 10.1890/0012-9658(2006)87[3128:HVNCOM]2.0.CO;2  1
2006 Burkepile DE, Parker JD, Woodson CB, Mills HJ, Kubanek J, Sobecky PA, Hay ME. Chemically mediated competition between microbes and animals: microbes as consumers in food webs. Ecology. 87: 2821-31. PMID 17168026 DOI: 10.1890/0012-9658(2006)87[2821:CMCBMA]2.0.CO;2  1
2006 Parker JD, Burkepile DE, Hay ME. Opposing effects of native and exotic herbivores on plant invasions. Science (New York, N.Y.). 311: 1459-61. PMID 16527979 DOI: 10.1126/science.1121407  1
2004 Hay ME, Parker JD, Burkepile DE, Caudill CC, Wilson AE, Hallinan ZP, Chequer AD. Mutualisms and aquatic community structure: The enemy of my enemy is my friend Annual Review of Ecology, Evolution, and Systematics. 35: 175-197. DOI: 10.1146/annurev.ecolsys.34.011802.132357  1
2000 Burkepile DE, Moore MT, Holland MM. Susceptibility of five nontarget organisms to aqueous diazinon exposure. Bulletin of Environmental Contamination and Toxicology. 64: 114-21. PMID 10606702 DOI: 10.1007/s001289910018  1
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