| Year |
Citation |
Score |
| 2020 |
Yang J, Naik N, Patel JS, Wylie CS, Gu W, Huang J, Ytreberg FM, Naik MT, Weinreich DM, Rubenstein BM. Predicting the viability of beta-lactamase: How folding and binding free energies correlate with beta-lactamase fitness. Plos One. 15: e0233509. PMID 32470971 DOI: 10.1371/Journal.Pone.0233509 |
0.3 |
|
| 2019 |
Raynes Y, Weinreich D. Selection on mutators is not frequency-dependent. Elife. 8. PMID 31697233 DOI: 10.7554/Elife.51177 |
0.439 |
|
| 2019 |
Raynes Y, Weinreich DM. Genomic clustering of fitness-affecting mutations favors the evolution of chromosomal instability. Evolutionary Applications. 12: 301-313. PMID 30697341 DOI: 10.1111/Eva.12717 |
0.43 |
|
| 2019 |
Raynes Y, Sniegowski PD, Weinreich DM. Migration promotes mutator alleles in subdivided populations. Evolution; International Journal of Organic Evolution. PMID 30632605 DOI: 10.1111/Evo.13681 |
0.457 |
|
| 2019 |
Raynes Y, Weinreich D. Author response: Selection on mutators is not frequency-dependent Elife. DOI: 10.7554/Elife.51177.013 |
0.362 |
|
| 2018 |
Ferretti L, Weinreich D, Tajima F, Achaz G. Evolutionary constraints in fitness landscapes. Heredity. PMID 29993041 DOI: 10.1038/S41437-018-0110-1 |
0.358 |
|
| 2018 |
Weinreich DM, Lan Y, Jaffe J, Heckendorn RB. The Influence of Higher-Order Epistasis on Biological Fitness Landscape Topography. Journal of Statistical Physics. 172: 208-225. PMID 29904213 DOI: 10.1007/S10955-018-1975-3 |
0.428 |
|
| 2018 |
Stover KK, Weinreich DM, Roberts TJ, Brainerd EL. Patterns of musculoskeletal growth and dimensional changes associated with selection and developmental plasticity in domestic and wild strain turkeys. Ecology and Evolution. 8: 3229-3239. PMID 29607020 DOI: 10.1002/Ece3.3881 |
0.317 |
|
| 2018 |
Raynes Y, Wylie CS, Sniegowski PD, Weinreich DM. Sign of selection on mutation rate modifiers depends on population size. Proceedings of the National Academy of Sciences of the United States of America. PMID 29531067 DOI: 10.1073/Pnas.1715996115 |
0.498 |
|
| 2017 |
Graves CJ, Weinreich DM. Variability in fitness effects can preclude selection of the fittest. Annual Review of Ecology, Evolution, and Systematics. 48: 399-417. PMID 31572069 DOI: 10.1146/Annurev-Ecolsys-110316-022722 |
0.401 |
|
| 2017 |
Knies J, Cai F, Weinreich DM. Enzyme efficiency but not thermostability drives cefotaxime resistance evolution in TEM-1 β-lactamase. Molecular Biology and Evolution. PMID 28087769 DOI: 10.1093/Molbev/Msx053 |
0.656 |
|
| 2016 |
Baker CW, Miller CR, Thaweethai T, Yuan J, Hollibaugh Baker M, Joyce P, Weinreich DM. Genetically Determined Variation in Lysis Time Variance in the Bacteriophage ϕX174. G3 (Bethesda, Md.). PMID 26921293 DOI: 10.1534/G3.115.024075 |
0.439 |
|
| 2016 |
Ferretti L, Schmiegelt B, Weinreich D, Yamauchi A, Kobayashi Y, Tajima F, Achaz G. Measuring epistasis in fitness landscapes: the correlation of fitness effects of mutations. Journal of Theoretical Biology. PMID 26854875 DOI: 10.1016/J.Jtbi.2016.01.037 |
0.412 |
|
| 2016 |
Ogbunugafor CB, Wylie CS, Diakite I, Weinreich DM, Hartl DL. Adaptive Landscape by Environment Interactions Dictate Evolutionary Dynamics in Models of Drug Resistance. Plos Computational Biology. 12: e1004710. PMID 26808374 DOI: 10.1371/Journal.Pcbi.1004710 |
0.533 |
|
| 2015 |
Meini MR, Tomatis PE, Weinreich DM, Vila AJ. Quantitative Description of a Protein Fitness Landscape Based on Molecular Features. Molecular Biology and Evolution. 32: 1774-87. PMID 25767204 DOI: 10.1093/Molbev/Msv059 |
0.41 |
|
| 2014 |
Watson RA, Wagner GP, Pavlicev M, Weinreich DM, Mills R. The evolution of phenotypic correlations and "developmental memory". Evolution; International Journal of Organic Evolution. 68: 1124-38. PMID 24351058 DOI: 10.1111/Evo.12337 |
0.373 |
|
| 2013 |
Weinreich DM, Lan Y, Wylie CS, Heckendorn RB. Should evolutionary geneticists worry about higher-order epistasis? Current Opinion in Genetics & Development. 23: 700-7. PMID 24290990 DOI: 10.1016/J.Gde.2013.10.007 |
0.473 |
|
| 2013 |
Weinreich DM, Knies JL. Fisher's geometric model of adaptation meets the functional synthesis: data on pairwise epistasis for fitness yields insights into the shape and size of phenotype space. Evolution; International Journal of Organic Evolution. 67: 2957-72. PMID 24094346 DOI: 10.1111/Evo.12156 |
0.637 |
|
| 2013 |
Weinreich DM, Sindi S, Watson RA. Finding the boundary between evolutionary basins of attraction, and implications for Wright's fitness landscape analogy Journal of Statistical Mechanics: Theory and Experiment. 2013. DOI: 10.1088/1742-5468/2013/01/P01001 |
0.41 |
|
| 2012 |
Liberles DA, Teichmann SA, Bahar I, Bastolla U, Bloom J, Bornberg-Bauer E, Colwell LJ, de Koning AP, Dokholyan NV, Echave J, Elofsson A, Gerloff DL, Goldstein RA, Grahnen JA, Holder MT, ... ... Weinreich DM, et al. The interface of protein structure, protein biophysics, and molecular evolution. Protein Science : a Publication of the Protein Society. 21: 769-85. PMID 22528593 DOI: 10.1002/Pro.2071 |
0.339 |
|
| 2011 |
Weinreich DM. High-throughput identification of genetic interactions in HIV-1. Nature Genetics. 43: 398-400. PMID 21522176 DOI: 10.1038/Ng.820 |
0.342 |
|
| 2011 |
Watson RA, Weinreich DM, Wakeley J. Genome structure and the benefit of sex. Evolution; International Journal of Organic Evolution. 65: 523-36. PMID 21029076 DOI: 10.1111/J.1558-5646.2010.01144.X |
0.468 |
|
| 2010 |
Christin PA, Weinreich DM, Besnard G. Causes and evolutionary significance of genetic convergence. Trends in Genetics : Tig. 26: 400-5. PMID 20685006 DOI: 10.1016/J.Tig.2010.06.005 |
0.405 |
|
| 2010 |
O'Keefe KJ, Silander OK, McCreery H, Weinreich DM, Wright KM, Chao L, Edwards SV, Remold SK, Turner PE. Geographic differences in sexual reassortment in RNA phage. Evolution; International Journal of Organic Evolution. 64: 3010-23. PMID 20500219 DOI: 10.1111/J.1558-5646.2010.01040.X |
0.723 |
|
| 2010 |
Rand DM, Weinreich DM, Lerman D, Folk D, Gilchrist GW. Three selections are better than one: clinal variation of thermal QTL from independent selection experiments in Drosophila. Evolution; International Journal of Organic Evolution. 64: 2921-34. PMID 20497214 DOI: 10.1111/J.1558-5646.2010.01039.X |
0.593 |
|
| 2009 |
Brown KM, Depristo MA, Weinreich DM, Hartl DL. Temporal constraints on the incorporation of regulatory mutants in evolutionary pathways. Molecular Biology and Evolution. 26: 2455-62. PMID 19602543 DOI: 10.1093/Molbev/Msp151 |
0.673 |
|
| 2009 |
Lozovsky ER, Chookajorn T, Brown KM, Imwong M, Shaw PJ, Kamchonwongpaisan S, Neafsey DE, Weinreich DM, Hartl DL. Stepwise acquisition of pyrimethamine resistance in the malaria parasite. Proceedings of the National Academy of Sciences of the United States of America. 106: 12025-30. PMID 19587242 DOI: 10.1073/Pnas.0905922106 |
0.692 |
|
| 2007 |
DePristo MA, Hartl DL, Weinreich DM. Mutational reversions during adaptive protein evolution. Molecular Biology and Evolution. 24: 1608-10. PMID 17556755 DOI: 10.1093/Molbev/Msm118 |
0.611 |
|
| 2007 |
Poelwijk FJ, Kiviet DJ, Weinreich DM, Tans SJ. Empirical fitness landscapes reveal accessible evolutionary paths. Nature. 445: 383-6. PMID 17251971 DOI: 10.1038/Nature05451 |
0.359 |
|
| 2006 |
Polz MF, Hunt DE, Preheim SP, Weinreich DM. Patterns and mechanisms of genetic and phenotypic differentiation in marine microbes. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 361: 2009-21. PMID 17062417 DOI: 10.1098/Rstb.2006.1928 |
0.406 |
|
| 2006 |
Watson RA, Weinreich DM, Wakeley J. Effects of intra-gene fitness interactions on the benefit of sexual recombination. Biochemical Society Transactions. 34: 560-1. PMID 16856860 DOI: 10.1042/Bst0340560 |
0.453 |
|
| 2006 |
Weinreich DM, Delaney NF, Depristo MA, Hartl DL. Darwinian evolution can follow only very few mutational paths to fitter proteins. Science (New York, N.Y.). 312: 111-4. PMID 16601193 DOI: 10.1126/Science.1123539 |
0.588 |
|
| 2005 |
Silander OK, Weinreich DM, Wright KM, O'Keefe KJ, Rang CU, Turner PE, Chao L. Widespread genetic exchange among terrestrial bacteriophages. Proceedings of the National Academy of Sciences of the United States of America. 102: 19009-14. PMID 16365305 DOI: 10.1073/Pnas.0503074102 |
0.736 |
|
| 2005 |
Weinreich DM. The rank ordering of genotypic fitness values predicts genetic constraint on natural selection on landscapes lacking sign epistasis. Genetics. 171: 1397-405. PMID 16079241 DOI: 10.1534/Genetics.104.036830 |
0.438 |
|
| 2005 |
DePristo MA, Weinreich DM, Hartl DL. Missense meanderings in sequence space: a biophysical view of protein evolution. Nature Reviews. Genetics. 6: 678-87. PMID 16074985 DOI: 10.1038/Nrg1672 |
0.522 |
|
| 2005 |
Weinreich DM, Chao L. Rapid evolutionary escape by large populations from local fitness peaks is likely in nature. Evolution; International Journal of Organic Evolution. 59: 1175-82. PMID 16050095 DOI: 10.1111/J.0014-3820.2005.Tb01769.X |
0.635 |
|
| 2005 |
Weinreich DM, Watson RA, Chao L. Perspective: Sign epistasis and genetic constraint on evolutionary trajectories. Evolution; International Journal of Organic Evolution. 59: 1165-74. PMID 16050094 DOI: 10.1554/04-272 |
0.652 |
|
| 2003 |
Sheldahl LA, Weinreich DM, Rand DM. Recombination, dominance and selection on amino acid polymorphism in the Drosophila genome: contrasting patterns on the X and fourth chromosomes. Genetics. 165: 1195-208. PMID 14668375 |
0.538 |
|
| 2001 |
Weinreich DM. The rates of molecular evolution in rodent and primate mitochondrial DNA. Journal of Molecular Evolution. 52: 40-50. PMID 11139293 DOI: 10.1007/S002390010132 |
0.424 |
|
| 2000 |
Rand DM, Weinreich DM, Cezairliyan BO. Neutrality tests of conservative-radical amino acid changes in nuclear- and mitochondrially-encoded proteins. Gene. 261: 115-25. PMID 11164043 DOI: 10.1016/S0378-1119(00)00483-2 |
0.593 |
|
| 2000 |
Weinreich DM, Rand DM. Contrasting patterns of nonneutral evolution in proteins encoded in nuclear and mitochondrial genomes. Genetics. 156: 385-99. PMID 10978302 |
0.591 |
|
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