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Ching-Yun Chang, Ph.D. - Publications

Affiliations: 
2013 Statistics Purdue University, West Lafayette, IN, United States 
Area:
Statistics, Biostatistics Biology
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13 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Huttenhain R, Choi M, Martin de la Fuente L, Oehl K, Chang CY, Zimmermann AK, Malander S, Olsson H, Surinova S, Clough T, Heinzelmann-Schwarz V, Wild PJ, Dinulescu D, Niméus E, Vitek O, et al. A targeted mass spectrometry strategy for developing proteomic biomarkers: a case study of epithelial ovarian cancer. Molecular & Cellular Proteomics : McP. PMID 31289117 DOI: 10.1074/Mcp.Ra118.001221  0.675
2015 Surinova S, Choi M, Tao S, Schüffler PJ, Chang CY, Clough T, Vysloužil K, Khoylou M, Srovnal J, Liu Y, Matondo M, Hüttenhain R, Weisser H, Buhmann JM, Hajdúch M, et al. Prediction of colorectal cancer diagnosis based on circulating plasma proteins. Embo Molecular Medicine. PMID 26253081 DOI: 10.15252/Emmm.201404873  0.662
2015 Selevsek N, Chang CY, Gillet LC, Navarro P, Bernhardt OM, Reiter L, Cheng LY, Vitek O, Aebersold R. Reproducible and consistent quantification of the Saccharomyces cerevisiae proteome by SWATH-mass spectrometry. Molecular & Cellular Proteomics : McP. 14: 739-49. PMID 25561506 DOI: 10.1074/Mcp.M113.035550  0.639
2015 Cheng L, Liu Y, Chang C, Röst H, Aebersold R, Vitek O. Statistical elimination of spectral features with large between-run variation enhances quantitative protein-level conclusions in experiments with data-independent spectral acquisition Bmc Bioinformatics. 16. DOI: 10.1186/1471-2105-16-S2-A4  0.567
2014 Choi M, Chang CY, Clough T, Broudy D, Killeen T, MacLean B, Vitek O. MSstats: an R package for statistical analysis of quantitative mass spectrometry-based proteomic experiments. Bioinformatics (Oxford, England). 30: 2524-6. PMID 24794931 DOI: 10.1093/Bioinformatics/Btu305  0.672
2014 Chang CY, Sabidó E, Aebersold R, Vitek O. Targeted protein quantification using sparse reference labeling. Nature Methods. 11: 301-4. PMID 24441934 DOI: 10.1038/Nmeth.2806  0.622
2014 Thaminy S, Blaser H, Clough T, Zhou Y, Snijder B, Chang C, Sheu C, Yu D, Pelkmans L, Mak T, Watts J, Vitek O, Aebersold R. Integrated-omics analysis uncovers a fundamental hypoxia-driven mechanism of breast cancer progression F1000research. 5. DOI: 10.7490/F1000Research.1096216.1  0.644
2013 Surinova S, Hüttenhain R, Chang CY, Espona L, Vitek O, Aebersold R. Automated selected reaction monitoring data analysis workflow for large-scale targeted proteomic studies. Nature Protocols. 8: 1602-19. PMID 23887179 DOI: 10.1038/Nprot.2013.091  0.66
2013 Sabidó E, Wu Y, Bautista L, Porstmann T, Chang CY, Vitek O, Stoffel M, Aebersold R. Targeted proteomics reveals strain-specific changes in the mouse insulin and central metabolic pathways after a sustained high-fat diet. Molecular Systems Biology. 9: 681. PMID 23860498 DOI: 10.1038/Msb.2013.36  0.57
2012 Muhlemann JK, Maeda H, Chang CY, San Miguel P, Baxter I, Cooper B, Perera MA, Nikolau BJ, Vitek O, Morgan JA, Dudareva N. Developmental changes in the metabolic network of snapdragon flowers. Plos One. 7: e40381. PMID 22808147 DOI: 10.1371/Journal.Pone.0040381  0.532
2012 Sabidó E, Quehenberger O, Shen Q, Chang CY, Shah I, Armando AM, Andreyev A, Vitek O, Dennis EA, Aebersold R. Targeted proteomics of the eicosanoid biosynthetic pathway completes an integrated genomics-proteomics-metabolomics picture of cellular metabolism. Molecular & Cellular Proteomics : McP. 11: M111.014746. PMID 22361236 DOI: 10.1074/Mcp.M111.014746  0.602
2012 Chang CY, Picotti P, Hüttenhain R, Heinzelmann-Schwarz V, Jovanovic M, Aebersold R, Vitek O. Protein significance analysis in selected reaction monitoring (SRM) measurements. Molecular & Cellular Proteomics : McP. 11: M111.014662. PMID 22190732 DOI: 10.1074/Mcp.M111.014662  0.634
2010 Uberti B, Pressler BM, Alkabes SB, Chang CY, Moore GE, Lescun TB, Sojka JE. Effect of heparin administration on urine protein excretion during the developmental stage of experimentally induced laminitis in horses. American Journal of Veterinary Research. 71: 1462-7. PMID 21117998 DOI: 10.2460/Ajvr.71.12.1462  0.302
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