| Year |
Citation |
Score |
| 2024 |
Schroeter KL, Rolfe N, Forrester TJB, Kimber MS, Seah SYK. Shy is a proteobacterial steroid hydratase which catalyzes steroid side chain degradation without requiring a catalytically inert partner domain. The Journal of Biological Chemistry. 300: 107509. PMID 38944126 DOI: 10.1016/j.jbc.2024.107509 |
0.39 |
|
| 2023 |
Doyle L, Ovchinnikova OG, Huang BS, Forrester TJB, Lowary TL, Kimber MS, Whitfield C. Mechanism and linkage specificities of the dual retaining β-Kdo glycosyltransferase modules of KpsC from bacterial capsule biosynthesis. The Journal of Biological Chemistry. 104609. PMID 36924942 DOI: 10.1016/j.jbc.2023.104609 |
0.306 |
|
| 2022 |
Forrester TJB, Ovchinnikova OG, Li Z, Kitova EN, Nothof JT, Koizumi A, Klassen JS, Lowary TL, Whitfield C, Kimber MS. The retaining β-Kdo glycosyltransferase WbbB uses a double-displacement mechanism with an intermediate adduct rearrangement step. Nature Communications. 13: 6277. PMID 36271007 DOI: 10.1038/s41467-022-33988-1 |
0.336 |
|
| 2022 |
Abraham N, Schroeter KL, Zhu Y, Chan J, Evans N, Kimber MS, Carere J, Zhou T, Seah SYK. Structure-function characterization of an aldo-keto reductase involved in detoxification of the mycotoxin, deoxynivalenol. Scientific Reports. 12: 14737. PMID 36042239 DOI: 10.1038/s41598-022-19040-8 |
0.408 |
|
| 2022 |
Kelly SD, Williams DM, Nothof JT, Kim T, Lowary TL, Kimber MS, Whitfield C. The biosynthetic origin of ribofuranose in bacterial polysaccharides. Nature Chemical Biology. 18: 530-537. PMID 35393575 DOI: 10.1038/s41589-022-01006-6 |
0.345 |
|
| 2021 |
Boddington K, Soubeyrand E, Van Gelder K, Casaretto JA, Perrin C, Forrester TJB, Parry C, Al-Abdul-Wahid MS, Jentsch NG, Magolan J, Bozzo GG, Kimber MS, Rothstein SJ, Akhtar TA. Bibenzyl synthesis in Cannabis sativa L. The Plant Journal : For Cell and Molecular Biology. PMID 34786774 DOI: 10.1111/tpj.15588 |
0.317 |
|
| 2021 |
Wang W, Zhu Y, Abraham N, Li XZ, Kimber M, Zhou T. The Ribosome-Binding Mode of Trichothecene Mycotoxins Rationalizes Their Structure-Activity Relationships. International Journal of Molecular Sciences. 22. PMID 33562610 DOI: 10.3390/ijms22041604 |
0.331 |
|
| 2020 |
Stirling AJ, Gilbert SE, Conner M, Mallette E, Kimber MS, Seah SYK. A Key Glycine in Bacterial Steroid-Degrading Acyl-CoA Dehydrogenases Allows Flavin-Ring Repositioning and Modulates Substrate Side Chain Specificity. Biochemistry. 59: 4081-4092. PMID 33040522 DOI: 10.1021/acs.biochem.0c00568 |
0.342 |
|
| 2020 |
Clarke BR, Ovchinnikova OG, Sweeney RP, Kamski-Hennekam ER, Gitalis R, Mallette E, Kelly SD, Lowary TL, Kimber MS, Whitfield C. A bifunctional O-antigen polymerase structure reveals a new glycosyltransferase family. Nature Chemical Biology. PMID 32152541 DOI: 10.1038/S41589-020-0494-0 |
0.411 |
|
| 2020 |
Kimber MS, Forrester TJ, Mallette E, Ovchinnikova OG, Nothof JT, Koizumi A, Lowary TL, Whitfield C. The Structurally Unusual Retaining β‐Kdo Glycosyltransferase WbbB Uses a Double‐Displacement Mechanism with an Intermediate Adduct Rearrangement Step The Faseb Journal. 34: 1-1. DOI: 10.1096/Fasebj.2020.34.S1.04854 |
0.333 |
|
| 2019 |
Wang W, Archbold T, Lam JS, Kimber MS, Fan MZ. A processive endoglucanase with multi-substrate specificity is characterized from porcine gut microbiota. Scientific Reports. 9: 13630. PMID 31541154 DOI: 10.1038/S41598-019-50050-1 |
0.345 |
|
| 2019 |
Mann E, Kimber MS, Whitfield C. Bioinformatics analysis of diversity in bacterial glycan chain-termination chemistry and organization of carbohydrate binding modules linked to ABC transporters. Glycobiology. PMID 31504498 DOI: 10.1093/Glycob/Cwz066 |
0.401 |
|
| 2019 |
Aggett R, Mallette E, Gilbert SE, Vachon MA, Schroeter KL, Kimber MS, Seah SYK. The steroid side chain-cleaving aldolase Ltp2-ChsH2 is a thiolase superfamily member with a radically repurposed active site. The Journal of Biological Chemistry. PMID 31209106 DOI: 10.1074/jbc.RA119.008889 |
0.38 |
|
| 2019 |
Doyle L, Ovchinnikova OG, Myler K, Mallette E, Huang BS, Lowary TL, Kimber MS, Whitfield C. Biosynthesis of a conserved glycolipid anchor for Gram-negative bacterial capsules. Nature Chemical Biology. PMID 31036922 DOI: 10.1038/S41589-019-0276-8 |
0.44 |
|
| 2019 |
Forrester TJB, El Osta L, Lam JS, Kimber MS. Designing Glycosyltransferase Expression Constructs for Improved Purification, Protein Yield, and Crystallization. Methods in Molecular Biology (Clifton, N.J.). 1954: 137-150. PMID 30864129 DOI: 10.1007/978-1-4939-9154-9_11 |
0.352 |
|
| 2019 |
Aggett R, Mallette E, Gilbert SE, Vachon MA, Schroeter KL, Kimber MS, Seah SYK. The steroid side-chain-cleaving aldolase Ltp2-ChsH2DUF35 is a thiolase superfamily member with a radically repurposed active site. Journal of Biological Chemistry. 294: 11934-11943. DOI: 10.2210/Pdb6Ok1/Pdb |
0.467 |
|
| 2018 |
Ryan P, Forrester TJB, Wroblewski C, Kenney TMG, Kitova EN, Klassen JS, Kimber MS. The small RbcS-like domains of the β-carboxysome structural protein, CcmM, bind RubisCO at a site distinct from that binding the RbcS subunit. The Journal of Biological Chemistry. PMID 30591587 DOI: 10.1074/jbc.RA118.006330 |
0.354 |
|
| 2018 |
Mallette E, Kimber MS. Structural and kinetic characterization of (S)-1-amino-2-propanol kinase from the aminoacetone utilization microcompartment of . The Journal of Biological Chemistry. PMID 30361441 DOI: 10.1074/Jbc.Ra118.005485 |
0.392 |
|
| 2018 |
Kimber MS, Mallette E. Structure and kinetics of the S-(+)-1-amino-2-propanol dehydrogenase from the RMM microcompartment of Mycobacterium smegmatis. Biochemistry. PMID 29757625 DOI: 10.1021/Acs.Biochem.8B00464 |
0.484 |
|
| 2017 |
Williams DM, Ovchinnikova OG, Koizumi A, Mainprize IL, Kimber MS, Lowary TL, Whitfield C. Single polysaccharide assembly protein that integrates polymerization, termination, and chain-length quality control. Proceedings of the National Academy of Sciences of the United States of America. PMID 28137848 DOI: 10.1073/Pnas.1613609114 |
0.395 |
|
| 2016 |
Mallette E, Kimber MS. A Complete Structural Inventory of the Mycobacterial Microcompartment Shell Proteins Constrains Models of Global Architecture and Transport. The Journal of Biological Chemistry. PMID 27927988 DOI: 10.1074/Jbc.M116.754093 |
0.354 |
|
| 2016 |
McGurn LD, Moazami-Goudarzi M, White SA, Suwal T, Brar B, Tang JQ, Espie GS, Kimber MS. The structure, kinetics and interactions of the β-carboxysomal β-carbonic anhydrase, CcaA. The Biochemical Journal. PMID 27729545 DOI: 10.1042/Bcj20160773 |
0.458 |
|
| 2016 |
Ovchinnikova OG, Doyle L, Huang BS, Kimber MS, Lowary TL, Whitfield C. Biochemical characterization of bifunctional 3-deoxy-β-D-manno-oct-2-ulosonic acid (β‑Kdo) transferase KpsC from Escherichia coli involved in capsule biosynthesis. The Journal of Biological Chemistry. PMID 27535220 DOI: 10.1074/Jbc.M116.751115 |
0.405 |
|
| 2016 |
Ovchinnikova OG, Mallette E, Koizumi A, Lowary TL, Kimber MS, Whitfield C. Bacterial β-Kdo glycosyltransferases represent a new glycosyltransferase family (GT99). Proceedings of the National Academy of Sciences of the United States of America. PMID 27199480 DOI: 10.1073/Pnas.1603146113 |
0.413 |
|
| 2016 |
Roach EJ, Wroblewski C, Seidel L, Berezuk AM, Brewer D, Kimber MS, Khursigara CM. Structure and Mutational Analysis of Escherichia coli ZapD Reveals Charged Residues Involved in FtsZ Filament Bundling. Journal of Bacteriology. PMID 27021560 DOI: 10.1128/Jb.00969-15 |
0.41 |
|
| 2016 |
Mann E, Mallette E, Clarke BR, Kimber MS, Whitfield C. The Klebsiella pneumoniae O12 ATP-binding cassette (ABC) transporter recognizes the terminal residue of its O-antigen polysaccharide substrate. The Journal of Biological Chemistry. PMID 26934919 DOI: 10.1074/Jbc.M116.719344 |
0.364 |
|
| 2016 |
Mazurkewich S, Brott AS, Kimber MS, Seah SY. Structural and Kinetic Characterization of the 4-Carboxy-2-Hydroxymuconate Hydratase from the Gallate and Protocatechuate 4,5-Cleavage Pathways of Pseudomonas putida KT2440. The Journal of Biological Chemistry. PMID 26867578 DOI: 10.1074/Jbc.M115.682054 |
0.429 |
|
| 2015 |
Lang S, Cressatti M, Mendoza KE, Coumoundouros CN, Plater SM, Culham DE, Kimber MS, Wood JM. YehZYXW of Escherichia coli Is a Low-Affinity, Non-Osmoregulatory Betaine-Specific ABC Transporter. Biochemistry. 54: 5735-47. PMID 26325238 DOI: 10.1021/Acs.Biochem.5B00274 |
0.411 |
|
| 2015 |
Kim J, Kimber MS, Nishimura K, Friso G, Schultz L, Ponnala L, van Wijk KJ. Structures, Functions, and Interactions of ClpT1 and ClpT2 in the Clp Protease System of Arabidopsis Chloroplasts. The Plant Cell. 27: 1477-96. PMID 25921872 DOI: 10.1105/Tpc.15.00106 |
0.397 |
|
| 2014 |
Roach EJ, Kimber MS, Khursigara CM. Crystal structure and site-directed mutational analysis reveals key residues involved in Escherichia coli ZapA function. The Journal of Biological Chemistry. 289: 23276-86. PMID 25002581 DOI: 10.1074/Jbc.M114.561928 |
0.415 |
|
| 2014 |
de Araujo C, Arefeen D, Tadesse Y, Long BM, Price GD, Rowlett RS, Kimber MS, Espie GS. Identification and characterization of a carboxysomal γ-carbonic anhydrase from the cyanobacterium Nostoc sp. PCC 7120. Photosynthesis Research. 121: 135-50. PMID 24907906 DOI: 10.1007/S11120-014-0018-4 |
0.344 |
|
| 2014 |
Keeling TJ, Samborska B, Demers RW, Kimber MS. Interactions and structural variability of β-carboxysomal shell protein CcmL. Photosynthesis Research. 121: 125-33. PMID 24504539 DOI: 10.1007/S11120-014-9973-Z |
0.358 |
|
| 2014 |
Kimber MS. Carboxysomal carbonic anhydrases. Sub-Cellular Biochemistry. 75: 89-103. PMID 24146376 DOI: 10.1007/978-94-007-7359-2_6 |
0.357 |
|
| 2013 |
Mainprize IL, Bean JD, Bouwman C, Kimber MS, Whitfield C. The UDP-glucose dehydrogenase of Escherichia coli K-12 displays substrate inhibition by NAD that is relieved by nucleotide triphosphates. The Journal of Biological Chemistry. 288: 23064-74. PMID 23792965 DOI: 10.1074/Jbc.M113.486613 |
0.389 |
|
| 2013 |
Carere J, McKenna SE, Kimber MS, Seah SY. Characterization of an aldolase-dehydrogenase complex from the cholesterol degradation pathway of Mycobacterium tuberculosis. Biochemistry. 52: 3502-11. PMID 23614353 DOI: 10.1021/Bi400351H |
0.452 |
|
| 2012 |
Samborska B, Kimber MS. A dodecameric CcmK2 structure suggests β-carboxysomal shell facets have a double-layered organization. Structure (London, England : 1993). 20: 1353-62. PMID 22748766 DOI: 10.1016/J.Str.2012.05.013 |
0.327 |
|
| 2011 |
Espie GS, Kimber MS. Carboxysomes: cyanobacterial RubisCO comes in small packages. Photosynthesis Research. 109: 7-20. PMID 21556873 DOI: 10.1007/S11120-011-9656-Y |
0.308 |
|
| 2010 |
Wang W, Mazurkewich S, Kimber MS, Seah SY. Structural and kinetic characterization of 4-hydroxy-4-methyl-2-oxoglutarate/4-carboxy-4-hydroxy-2-oxoadipate aldolase, a protocatechuate degradation enzyme evolutionarily convergent with the HpaI and DmpG pyruvate aldolases. The Journal of Biological Chemistry. 285: 36608-15. PMID 20843800 DOI: 10.1074/Jbc.M110.159509 |
0.46 |
|
| 2010 |
Kimber MS, Yu AY, Borg M, Leung E, Chan HS, Houry WA. Structural and theoretical studies indicate that the cylindrical protease ClpP samples extended and compact conformations. Structure (London, England : 1993). 18: 798-808. PMID 20637416 DOI: 10.1016/J.Str.2010.04.008 |
0.425 |
|
| 2010 |
Peña KL, Castel SE, de Araujo C, Espie GS, Kimber MS. Structural basis of the oxidative activation of the carboxysomal gamma-carbonic anhydrase, CcmM. Proceedings of the National Academy of Sciences of the United States of America. 107: 2455-60. PMID 20133749 DOI: 10.1073/Pnas.0910866107 |
0.375 |
|
| 2009 |
Law AM, Lai SW, Tavares J, Kimber MS. The structural basis of beta-peptide-specific cleavage by the serine protease cyanophycinase. Journal of Molecular Biology. 392: 393-404. PMID 19591842 DOI: 10.1016/J.Jmb.2009.07.001 |
0.444 |
|
| 2009 |
Sun W, Shahinas D, Bonvin J, Hou W, Kimber MS, Turnbull J, Christendat D. The crystal structure of Aquifex aeolicus prephenate dehydrogenase reveals the mode of tyrosine inhibition. The Journal of Biological Chemistry. 284: 13223-32. PMID 19279014 DOI: 10.1074/Jbc.M806272200 |
0.494 |
|
| 2009 |
Larue K, Kimber MS, Ford R, Whitfield C. Biochemical and structural analysis of bacterial O-antigen chain length regulator proteins reveals a conserved quaternary structure. The Journal of Biological Chemistry. 284: 7395-403. PMID 19129185 DOI: 10.1074/Jbc.M809068200 |
0.349 |
|
| 2008 |
Jørgensen R, Purdy AE, Fieldhouse RJ, Kimber MS, Bartlett DH, Merrill AR. Cholix toxin, a novel ADP-ribosylating factor from Vibrio cholerae. The Journal of Biological Chemistry. 283: 10671-8. PMID 18276581 DOI: 10.1074/Jbc.M710008200 |
0.422 |
|
| 2007 |
Cuthbertson L, Kimber MS, Whitfield C. Substrate binding by a bacterial ABC transporter involved in polysaccharide export. Proceedings of the National Academy of Sciences of the United States of America. 104: 19529-34. PMID 18032609 DOI: 10.1073/Pnas.0705709104 |
0.394 |
|
| 2005 |
Shinoda T, Arai K, Shigematsu-Iida M, Ishikura Y, Tanaka S, Yamada T, Kimber MS, Pai EF, Fushinobu S, Taguchi H. Distinct conformation-mediated functions of an active site loop in the catalytic reactions of NAD-dependent D-lactate dehydrogenase and formate dehydrogenase. The Journal of Biological Chemistry. 280: 17068-75. PMID 15734738 DOI: 10.1074/jbc.M500970200 |
0.592 |
|
| 2005 |
Gribun A, Kimber MS, Ching R, Sprangers R, Fiebig KM, Houry WA. The ClpP double ring tetradecameric protease exhibits plastic ring-ring interactions, and the N termini of its subunits form flexible loops that are essential for ClpXP and ClpAP complex formation. The Journal of Biological Chemistry. 280: 16185-96. PMID 15701650 DOI: 10.1074/Jbc.M414124200 |
0.419 |
|
| 2004 |
Kimber MS, Martin F, Lu Y, Houston S, Vedadi M, Dharamsi A, Fiebig KM, Schmid M, Rock CO. The structure of (3R)-hydroxyacyl-acyl carrier protein dehydratase (FabZ) from Pseudomonas aeruginosa. The Journal of Biological Chemistry. 279: 52593-602. PMID 15371447 DOI: 10.1074/Jbc.M408105200 |
0.45 |
|
| 2001 |
Saridakis V, Christendat D, Kimber MS, Dharamsi A, Edwards AM, Pai EF. Insights into ligand binding and catalysis of a central step in NAD+ synthesis: structures of Methanobacterium thermoautotrophicum NMN adenylyltransferase complexes. The Journal of Biological Chemistry. 276: 7225-32. PMID 11063748 DOI: 10.1074/Jbc.M008810200 |
0.679 |
|
| 2000 |
Kimber MS, Coleman JR, Pai EF. beta-carbonic anhydrase from Pisum sativum: crystallization and preliminary X-ray analysis. Acta Crystallographica. Section D, Biological Crystallography. 56: 927-9. PMID 10930848 DOI: 10.1107/S0907444900006545 |
0.522 |
|
| 2000 |
Kimber MS, Nachman J, Cunningham AM, Gish GD, Pawson T, Pai EF. Structural basis for specificity switching of the Src SH2 domain. Molecular Cell. 5: 1043-9. PMID 10911998 DOI: 10.1016/S1097-2765(00)80269-5 |
0.591 |
|
| 2000 |
Kimber MS, Pai EF. The active site architecture of Pisum sativum beta-carbonic anhydrase is a mirror image of that of alpha-carbonic anhydrases. The Embo Journal. 19: 1407-18. PMID 10747009 DOI: 10.1093/Emboj/19.7.1407 |
0.596 |
|
| 1996 |
Stoll VS, Kimber MS, Pai EF. Insights into substrate binding by D-2-ketoacid dehydrogenases from the structure of Lactobacillus pentosus D-lactate dehydrogenase. Structure (London, England : 1993). 4: 437-47. PMID 8740366 DOI: 10.1016/S0969-2126(96)00049-4 |
0.622 |
|
| 1995 |
Stoll VS, Kimber MS, MacFarlane EL, Eikmanns U, Taguchi H, Pai EF. Crystallization of the apo-forms of the d-lactate dehydrogenases from Lactobacillus pentosum and Leuconostoc mesenteroides Protein and Peptide Letters. 2: 435-440. |
0.478 |
|
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