Nancy Knowlton, Ph.D. - Publications

Affiliations: 
Smithsonian Institution, Washington, DC, United States 

119 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Leray M, Knowlton N, Ho SL, Nguyen BN, Machida RJ. Reply to Locatelli et al.: Evaluating species-level accuracy of GenBank metazoan sequences will require experts' effort in each group. Proceedings of the National Academy of Sciences of the United States of America. PMID 33234564 DOI: 10.1073/pnas.2019903117  0.56
2020 Nguyen BN, Shen EW, Seemann J, Correa AMS, O'Donnell JL, Altieri AH, Knowlton N, Crandall KA, Egan SP, McMillan WO, Leray M. Environmental DNA survey captures patterns of fish and invertebrate diversity across a tropical seascape. Scientific Reports. 10: 6729. PMID 32317664 DOI: 10.1038/S41598-020-63565-9  0.56
2019 Leray M, Knowlton N, Ho SL, Nguyen BN, Machida RJ. GenBank is a reliable resource for 21st century biodiversity research. Proceedings of the National Academy of Sciences of the United States of America. PMID 31636175 DOI: 10.1073/Pnas.1911714116  0.56
2019 Leray M, Alldredge AL, Yang JY, Meyer CP, Holbrook SJ, Schmitt RJ, Knowlton N, Brooks AJ. Dietary partitioning promotes the coexistence of planktivorous species on coral reefs. Molecular Ecology. PMID 30933383 DOI: 10.1111/Mec.15090  0.32
2018 Baker DM, Freeman CJ, Wong JCY, Fogel ML, Knowlton N. Climate change promotes parasitism in a coral symbiosis. The Isme Journal. PMID 29379177 DOI: 10.1038/S41396-018-0046-8  0.48
2017 Brandl SJ, Casey JM, Knowlton N, Duffy JE. Marine dock pilings foster diverse, native cryptobenthic fish assemblages across bioregions. Ecology and Evolution. 7: 7069-7079. PMID 28904784 DOI: 10.1002/Ece3.3288  0.44
2017 Leray M, Knowlton N. Random sampling causes the low reproducibility of rare eukaryotic OTUs in Illumina COI metabarcoding. Peerj. 5: e3006. PMID 28348924 DOI: 10.7717/Peerj.3006  0.32
2017 Altieri AH, Harrison SB, Seemann J, Collin R, Diaz RJ, Knowlton N. Tropical dead zones and mass mortalities on coral reefs. Proceedings of the National Academy of Sciences of the United States of America. PMID 28320966 DOI: 10.1073/Pnas.1621517114  0.56
2017 Machida RJ, Leray M, Ho SL, Knowlton N. Metazoan mitochondrial gene sequence reference datasets for taxonomic assignment of environmental samples. Scientific Data. 4: 170027. PMID 28291235 DOI: 10.1038/Sdata.2017.27  0.32
2016 Al-Rshaidat MM, Snider A, Rosebraugh S, Devine AM, Devine TD, Plaisance L, Knowlton N, Leray M. Deep COI sequencing of standardized benthic samples unveils overlooked diversity of Jordanian coral reefs in the northern Red Sea. Genome / National Research Council Canada = Genome / Conseil National De Recherches Canada. 1-14. PMID 27584940 DOI: 10.1139/Gen-2015-0208  1
2016 Leray M, Knowlton N. Censusing marine eukaryotic diversity in the twenty-first century. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 371. PMID 27481783 DOI: 10.1098/Rstb.2015.0331  0.32
2016 Leray M, Knowlton N. Visualizing Patterns of Marine Eukaryotic Diversity from Metabarcoding Data Using QIIME. Methods in Molecular Biology (Clifton, N.J.). 1452: 219-35. PMID 27460381 DOI: 10.1007/978-1-4939-3774-5_15  0.32
2015 Marko PB, Eytan RI, Knowlton N. Do large molecular sequence divergences imply an early closure of the Isthmus of Panama? Proceedings of the National Academy of Sciences of the United States of America. 112: E5766. PMID 26489657 DOI: 10.1073/Pnas.1515048112  1
2015 Baumgarten S, Simakov O, Esherick LY, Liew YJ, Lehnert EM, Michell CT, Li Y, Hambleton EA, Guse A, Oates ME, Gough J, Weis VM, Aranda M, Pringle JR, Voolstra CR. The genome of Aiptasia, a sea anemone model for coral symbiosis. Proceedings of the National Academy of Sciences of the United States of America. 112: 11893-8. PMID 26324906 DOI: 10.1073/Pnas.1513318112  1
2015 Machida RJ, Knowlton N. Correction: PCR Primers for Metazoan Nuclear 18S and 28S Ribosomal DNA Sequences. Plos One. 10: e0134314. PMID 26217954 DOI: 10.1371/Journal.Pone.0134314  0.32
2015 Baker DM, Freeman CJ, Knowlton N, Thacker RW, Kim K, Fogel ML. Productivity links morphology, symbiont specificity and bleaching in the evolution of Caribbean octocoral symbioses. The Isme Journal. PMID 25989369 DOI: 10.1038/Ismej.2015.71  0.52
2015 Leray M, Knowlton N. DNA barcoding and metabarcoding of standardized samples reveal patterns of marine benthic diversity. Proceedings of the National Academy of Sciences of the United States of America. 112: 2076-81. PMID 25646458 DOI: 10.1073/Pnas.1424997112  1
2015 Fisher R, O'Leary RA, Low-Choy S, Mengersen K, Knowlton N, Brainard RE, Caley MJ. Species richness on coral reefs and the pursuit of convergent global estimates. Current Biology : Cb. 25: 500-5. PMID 25639239 DOI: 10.1016/J.Cub.2014.12.022  1
2015 Jacquet J, Estes J, Jackson J, Johnson AE, Knowlton N, McClenachan L, Pauly D, Sala E. Ocean Calamities: Hyped Litany or Legitimate Concern? Bioscience. 65: 745-746. DOI: 10.1093/Biosci/Biv087  1
2015 LaJeunesse TC, Lee SY, Gil-Agudelo DL, Knowlton N, Jeong HJ. Symbiodinium necroappetens sp. nov. (Dinophyceae): an opportunist ‘zooxanthella’ found in bleached and diseased tissues of Caribbean reef corals European Journal of Phycology. 50: 223-238. DOI: 10.1080/09670262.2015.1025857  1
2015 Knowlton N, Leray M. Exploring coral reefs using the tools of molecular genetics Coral Reefs in the Anthropocene. 117-132. DOI: 10.1007/978-94-017-7249-5_6  1
2014 Connolly SR, MacNeil MA, Caley MJ, Knowlton N, Cripps E, Hisano M, Thibaut LM, Bhattacharya BD, Benedetti-Cecchi L, Brainard RE, Brandt A, Bulleri F, Ellingsen KE, Kaiser S, Kröncke I, et al. Commonness and rarity in the marine biosphere. Proceedings of the National Academy of Sciences of the United States of America. 111: 8524-9. PMID 24912168 DOI: 10.1073/Pnas.1406664111  1
2014 Rocha LA, Aleixo A, Allen G, Almeda F, Baldwin CC, Barclay MV, Bates JM, Bauer AM, Benzoni F, Berns CM, Berumen ML, Blackburn DC, Blum S, Bolaños F, Bowie RC, ... ... Knowlton N, et al. Specimen collection: an essential tool. Science (New York, N.Y.). 344: 814-5. PMID 24855245 DOI: 10.1126/Science.344.6186.814  1
2014 Levitan DR, Boudreau W, Jara J, Knowlton N. Long-term reduced spawning in Orbicella coral species due to temperature stress Marine Ecology Progress Series. 515: 1-10. DOI: 10.3354/Meps11063  1
2014 Huang D, Benzoni F, Fukami H, Knowlton N, Smith ND, Budd AF. Taxonomic classification of the reef coral families Merulinidae, Montastraeidae, and Diploastraeidae (Cnidaria: Anthozoa: Scleractinia) Zoological Journal of the Linnean Society. 171: 277-355. DOI: 10.1111/Zoj.12140  1
2013 Hurt C, Silliman K, Anker A, Knowlton N. Ecological speciation in anemone-associated snapping shrimps (Alpheus armatus species complex). Molecular Ecology. 22: 4532-48. PMID 23859595 DOI: 10.1111/Mec.12398  1
2013 Leslie HM, Goldman E, McLeod KL, Sievanen L, Balasubramanian H, Cudney-Bueno R, Feuerstein A, Knowlton N, Lee K, Pollnac R, Samhouri JF. How good science and stories can go hand-in-hand. Conservation Biology : the Journal of the Society For Conservation Biology. 27: 1126-9. PMID 23692176 DOI: 10.1111/Cobi.12080  1
2013 Baker DM, Weigt L, Fogel M, Knowlton N. Ancient DNA from coral-hosted Symbiodinium reveal a static mutualism over the last 172 years. Plos One. 8: e55057. PMID 23405111 DOI: 10.1371/Journal.Pone.0055057  1
2013 Gordon J, Knowlton N, Relman DA, Rohwer F, Youle M. Superorganisms and holobionts Microbe. 8: 152-153. DOI: 10.1128/Microbe.8.152.1  1
2013 Ruckelshaus M, Doney SC, Galindo HM, Barry JP, Chan F, Duffy JE, English CA, Gaines SD, Grebmeier JM, Hollowed AB, Knowlton N, Polovina J, Rabalais NN, Sydeman WJ, Talley LD. Securing ocean benefits for society in the face of climate change Marine Policy. 40: 154-159. DOI: 10.1016/J.Marpol.2013.01.009  1
2012 Fogarty ND, Lowenberg M, Ojima MN, Knowlton N, Levitan DR. Asymmetric conspecific sperm precedence in relation to spawning times in the Montastraea annularis species complex (Cnidaria: Scleractinia). Journal of Evolutionary Biology. 25: 2481-8. PMID 23107066 DOI: 10.1111/J.1420-9101.2012.02625.X  1
2012 Knowlton N. Iconic coral reef degraded despite substantial protection. Proceedings of the National Academy of Sciences of the United States of America. 109: 17734-5. PMID 23077251 DOI: 10.1073/Pnas.1215836109  1
2012 Machida RJ, Knowlton N. PCR primers for metazoan nuclear 18S and 28S ribosomal DNA sequences. Plos One. 7: e46180. PMID 23049971 DOI: 10.1371/Journal.Pone.0046180  1
2012 Machida RJ, Knowlton N. Ways to mix multiple PCR amplicons into single 454 run for DNA barcoding. Methods in Molecular Biology (Clifton, N.J.). 858: 355-61. PMID 22684964 DOI: 10.1007/978-1-61779-591-6_16  1
2012 Machida RJ, Kweskin M, Knowlton N. PCR primers for metazoan mitochondrial 12S ribosomal DNA sequences. Plos One. 7: e35887. PMID 22536450 DOI: 10.1371/Journal.Pone.0035887  1
2012 Doney SC, Ruckelshaus M, Duffy JE, Barry JP, Chan F, English CA, Galindo HM, Grebmeier JM, Hollowed AB, Knowlton N, Polovina J, Rabalais NN, Sydeman WJ, Talley LD. Climate change impacts on marine ecosystems. Annual Review of Marine Science. 4: 11-37. PMID 22457967 DOI: 10.1146/Annurev-Marine-041911-111611  1
2012 Machlis G, Frankovich TA, Alcolado PM, García-Machado E, Hernández-Zanuy AC, Hueter RE, Knowlton N, Perera E, Tunnell JW. US-Cuba scientific collaboration emerging issues and opportunities in marine and related environmental sciences Oceanography. 25: 227-231. DOI: 10.5670/Oceanog.2012.63  1
2012 Budd AF, Fukami H, Smith ND, Knowlton N. Taxonomic classification of the reef coral family Mussidae (Cnidaria: Anthozoa: Scleractinia) Zoological Journal of the Linnean Society. 166: 465-529. DOI: 10.1111/J.1096-3642.2012.00855.X  1
2011 Fisher R, Knowlton N, Brainard RE, Caley MJ. Differences among major taxa in the extent of ecological knowledge across four major ecosystems. Plos One. 6: e26556. PMID 22073172 DOI: 10.1371/Journal.Pone.0026556  1
2011 Plaisance L, Caley MJ, Brainard RE, Knowlton N. The diversity of coral reefs: what are we missing? Plos One. 6: e25026. PMID 22022371 DOI: 10.1371/Journal.Pone.0025026  1
2011 Nunes FL, Norris RD, Knowlton N. Long distance dispersal and connectivity in amphi-Atlantic corals at regional and basin scales. Plos One. 6: e22298. PMID 21799816 DOI: 10.1371/Journal.Pone.0022298  1
2011 Knowlton N. Nancy Knowlton. Current Biology : Cb. 21: R270-1. PMID 21667526 DOI: 10.1016/J.Cub.2011.02.015  1
2011 Levitan DR, Fogarty ND, Jara J, Lotterhos KE, Knowlton N. Genetic, spatial, and temporal components of precise spawning synchrony in reef building corals of the Montastraea annularis species complex. Evolution; International Journal of Organic Evolution. 65: 1254-70. PMID 21521188 DOI: 10.1111/J.1558-5646.2011.01235.X  1
2011 Plaisance L, Brainard R, Julian Caley M, Knowlton N. Using DNA barcoding and standardized sampling to compare geographic and habitat differentiation of crustaceans: A Hawaiian Islands example Diversity. 3: 581-591. DOI: 10.3390/D3040581  1
2011 Mumby PJ, Iglesias-Prieto R, Hooten AJ, Sale PF, Hoegh-Guldberg O, Edwards AJ, Harvell CD, Gomez ED, Knowlton N, Hatziolos ME, Kyewalyanga MS, Muthiga N. Revisiting climate thresholds and ecosystem collapse Frontiers in Ecology and the Environment. 9: 94-96. DOI: 10.1890/11.Wb.002  1
2011 Fisher R, Radford BT, Knowlton N, Brainard RE, Michaelis FB, Caley MJ. Global mismatch between research effort and conservation needs of tropical coral reefs Conservation Letters. 4: 64-72. DOI: 10.1111/J.1755-263X.2010.00146.X  1
2010 Terk E, Knowlton N. The role of SCUBA diver user fees as a source of sustainable funding for coral reef marine Protected areas Biodiversity. 11: 78-84. DOI: 10.1080/14888386.2010.9712651  1
2010 Knowlton N, Brainard RE, Fisher R, Moews M, Plaisance L, Caley MJ. Coral Reef Biodiversity Life in the World's Oceans: Diversity, Distribution, and Abundance. 65-78. DOI: 10.1002/9781444325508.ch4  1
2009 Nunes F, Norris RD, Knowlton N. Implications of isolation and low genetic diversity in peripheral populations of an amphi-Atlantic coral. Molecular Ecology. 18: 4283-97. PMID 19765228 DOI: 10.1111/J.1365-294X.2009.04347.X  1
2009 Hurt C, Anker A, Knowlton N. A multilocus test of simultaneous divergence across the Isthmus of Panama using snapping shrimp in the genus Alpheus. Evolution; International Journal of Organic Evolution. 63: 514-30. PMID 19154357 DOI: 10.1111/J.1558-5646.2008.00566.X  1
2009 Roth MS, Knowlton N. Distribution, abundance, and microhabitat characterization of small juvenile corals at Palmyra Atoll Marine Ecology Progress Series. 376: 133-142. DOI: 10.3354/Meps07787  1
2009 Anker A, Hurt C, Knowlton N. Description of cryptic taxa within the Alpheus bouvieri A. Milne-Edwards, 1878 and A. hebes Kim and Abele, 1988 species complexes (Crustacea: Decapoda: Alpheidae) Zootaxa. 1-23. DOI: 10.11646/Zootaxa.2153.1.1  1
2009 Plaisance L, Knowlton N, Paulay G, Meyer C. Reef-associated crustacean fauna: Biodiversity estimates using semi-quantitative sampling and DNA barcoding Coral Reefs. 28: 977-986. DOI: 10.1007/S00338-009-0543-3  1
2008 Fukami H, Chen CA, Budd AF, Collins A, Wallace C, Chuang YY, Chen C, Dai CF, Iwao K, Sheppard C, Knowlton N. Mitochondrial and nuclear genes suggest that stony corals are monophyletic but most families of stony corals are not (Order Scleractinia, Class Anthozoa, Phylum Cnidaria). Plos One. 3: e3222. PMID 18795098 DOI: 10.1371/Journal.Pone.0003222  1
2008 Baird A, Maynard JA. Coral adaptation in the face of climate change. Science (New York, N.Y.). 320: 315-6; author reply . PMID 18420915 DOI: 10.1126/science.320.5874.315  1
2008 Knowlton N, Jackson JB. Shifting baselines, local impacts, and global change on coral reefs. Plos Biology. 6: e54. PMID 18303956 DOI: 10.1371/Journal.Pbio.0060054  1
2008 Dinsdale EA, Pantos O, Smriga S, Edwards RA, Angly F, Wegley L, Hatay M, Hall D, Brown E, Haynes M, Krause L, Sala E, Sandin SA, Thurber RV, Willis BL, ... ... Knowlton N, et al. Microbial ecology of four coral atolls in the Northern Line Islands. Plos One. 3: e1584. PMID 18301735 DOI: 10.1371/Journal.Pone.0001584  1
2008 Sandin SA, Smith JE, Demartini EE, Dinsdale EA, Donner SD, Friedlander AM, Konotchick T, Malay M, Maragos JE, Obura D, Pantos O, Paulay G, Richie M, Rohwer F, Schroeder RE, ... ... Knowlton N, et al. Baselines and degradation of coral reefs in the Northern Line Islands. Plos One. 3: e1548. PMID 18301734 DOI: 10.1371/Journal.Pone.0001548  1
2008 Knowlton N. Coral reefs. Current Biology : Cb. 18: R18-21. PMID 18177705 DOI: 10.1016/j.cub.2007.11.018  1
2008 Ruckelshaus M, Klinger T, Knowlton N, DeMaster DP. Marine ecosystem-based management in practice: Scientific and governance challenges Bioscience. 58: 53-63. DOI: 10.1641/B580110  1
2008 Anker A, Hurt C, Knowlton N. Revision of the Alpheus websteri Kingsley, 1880 species complex (Crustacea: Decapoda: Alpheidae), with revalidation of A. arenensis (Chace, 1937) Zootaxa. 51-68. DOI: 10.11646/Zootaxa.1694.1.3  1
2008 Anker A, Hurt C, Knowlton N. Revision of the Alpheus cristulifrons species complex (Crustacea: Decapoda: Alpheidae), with description of a new species from the tropical eastern Atlantic Journal of the Marine Biological Association of the United Kingdom. 88: 543-562. DOI: 10.1017/S0025315408001136  1
2008 Nunes F, Fukami H, Vollmer SV, Norris RD, Knowlton N. Re-evaluation of the systematics of the endemic corals of Brazil by molecular data Coral Reefs. 27: 423-432. DOI: 10.1007/S00338-007-0349-0  1
2008 Anker A, Hurt C, Jara JA, Knowlton N. Revision of the Alpheus cylindricus Kingsley, 1878 species complex (Crustacea: Decapoda: Alpheidae), with re validation of A. vanderbilti Boone, 1930 Zootaxa. 53-68.  1
2008 Anker A, Hurt C, Knowlton N. Revision of the Alpheus formosus Gibbes, 1850 complex, with redescription of A. formosus and description of a new species from the tropical western Atlantic (Crustacea: Decapoda: Alpheidae) Zootaxa. 1-22.  1
2007 Hoegh-Guldberg O, Mumby PJ, Hooten AJ, Steneck RS, Greenfield P, Gomez E, Harvell CD, Sale PF, Edwards AJ, Caldeira K, Knowlton N, Eakin CM, Iglesias-Prieto R, Muthiga N, Bradbury RH, et al. Coral reefs under rapid climate change and ocean acidification. Science (New York, N.Y.). 318: 1737-42. PMID 18079392 DOI: 10.1126/Science.1152509  1
2007 Fukami H, Chen CA, Chiou CY, Knowlton N. Novel group I introns encoding a putative homing endonuclease in the mitochondrial cox1 gene of Scleractinian corals. Journal of Molecular Evolution. 64: 591-600. PMID 17437148 DOI: 10.1007/S00239-006-0279-4  1
2007 Mittelbach GG, Schemske DW, Cornell HV, Allen AP, Brown JM, Bush MB, Harrison SP, Hurlbert AH, Knowlton N, Lessios HA, McCain CM, McCune AR, McDade LA, McPeek MA, Near TJ, et al. Evolution and the latitudinal diversity gradient: speciation, extinction and biogeography. Ecology Letters. 10: 315-31. PMID 17355570 DOI: 10.1111/J.1461-0248.2007.01020.X  1
2007 Anker A, Hurt C, Knowlton N. Three transisthmian snapping shrimps (Crustacea: Decapoda: Alpheidae: Alpheus) associated with innkeeper worms (Echiura: Thalassematidae) in Panama Zootaxa. 1-23. DOI: 10.11646/Zootaxa.1626.1.1  1
2007 Anker A, Hurt C, Knowlton N. Revision of the Alpheus nuttingi (Schmitt) species complex (Crustacea: Decapoda: Alpheidae), with description of a new species from the tropical eastern Pacific Zootaxa. 41-60. DOI: 10.11646/Zootaxa.1577.1.5  1
2006 Kline DI, Bryant J, Kisflaudy E, Rohwer G, Nostropaur F, Grayson J, Knowlton N, Rohwer F. The aquatic automated dosing and maintenance system (AADAMS) Limnology and Oceanography: Methods. 4: 184-192. DOI: 10.4319/Lom.2006.4.184  1
2006 Kline DI, Kuntz NM, Breitbart M, Knowlton N, Rohwer F. Role of elevated organic carbon levels and microbial activity in coral mortality Marine Ecology Progress Series. 314: 119-125. DOI: 10.3354/Meps314119  1
2006 Sala E, Knowlton N. Global marine biodiversity trends Annual Review of Environment and Resources. 31: 93-122. DOI: 10.1146/Annurev.Energy.31.020105.100235  1
2006 Garren M, Walsh SM, Caccone A, Knowlton N. Patterns of association between Symbiodinium and members of the Montastraea annularis species complex on spatial scales ranging from within colonies to between geographic regions Coral Reefs. 25: 503-512. DOI: 10.1007/S00338-006-0146-1  1
2005 Fukami H, Knowlton N. Analysis of complete mitochondrial DNA sequences of three members of the Montastraea annularis coral species complex (Cnidaria, Anthozoa, Scleractinia) Coral Reefs. 24: 410-417. DOI: 10.1007/S00338-005-0023-3  1
2004 Fukami H, Budd AF, Levitan DR, Jara J, Kersanach R, Knowlton N. Geographic differences in species boundaries among members of the Montastraea annularis complex based on molecular and morphological markers. Evolution; International Journal of Organic Evolution. 58: 324-37. PMID 15068349 DOI: 10.1111/J.0014-3820.2004.Tb01648.X  1
2004 Levitan DR, Fukami H, Jara J, Kline D, McGovern TM, McGhee KE, Swanson CA, Knowlton N. Mechanisms of reproductive isolation among sympatric broadcast-spawning corals of the Montastraea annularis species complex. Evolution; International Journal of Organic Evolution. 58: 308-23. PMID 15068348 DOI: 10.1554/02-700  1
2004 Knowlton N. Ocean health and human health. Environmental Health Perspectives. 112: A262. PMID 15064175 DOI: 10.1289/Ehp.112-A262  1
2004 Fukami H, Budd AF, Paulay G, Solé-Cava A, Allen Chen C, Iwao K, Knowlton N. Conventional taxonomy obscures deep divergence between Pacific and Atlantic corals. Nature. 427: 832-5. PMID 14985760 DOI: 10.1038/Nature02339  1
2004 Knowlton N. Multiple "stable" states and the conservation of marine ecosystems Progress in Oceanography. 60: 387-396. DOI: 10.1016/J.Pocean.2004.02.011  1
2003 Knowlton N, Rohwer F. Multispecies microbial mutualisms on coral reefs: the host as a habitat. The American Naturalist. 162: S51-62. PMID 14583857 DOI: 10.1086/378684  1
2002 Williams ST, Jara J, Gomez E, Knowlton N. The marine indo-west pacific break: contrasting the resolving power of mitochondrial and nuclear genes. Integrative and Comparative Biology. 42: 941-52. PMID 21680374 DOI: 10.1093/Icb/42.5.941  1
2002 Rohwer F, Seguritan V, Azam F, Knowlton N. Diversity and distribution of coral-associated bacteria Marine Ecology Progress Series. 243: 1-10. DOI: 10.3354/Meps243001  1
2002 Toller WW, Rowan R, Knowlton N. Genetic evidence for a protozoan (phylum Apicomplexa) associated with corals of the Montastraea annularis species complex Coral Reefs. 21: 143-146. DOI: 10.1007/S00338-002-0220-2  1
2001 Toller WW, Rowan R, Knowlton N. Repopulation of Zooxanthellae in the Caribbean corals Montastraea annularis and M. faveolata following experimental and disease-associated bleaching. The Biological Bulletin. 201: 360-73. PMID 11751248 DOI: 10.2307/1543614  1
2001 Toller WW, Rowan R, Knowlton N. Zooxanthellae of the Montastraea annularis species complex: patterns of distribution of four taxa of Symbiodinium on different reefs and across depths. The Biological Bulletin. 201: 348-59. PMID 11751247 DOI: 10.2307/1543613  1
2001 Williams ST, Knowlton N, Weigt LA, Jara JA. Evidence for three major clades within the snapping shrimp genus Alpheus inferred from nuclear and mitochondrial gene sequence data. Molecular Phylogenetics and Evolution. 20: 375-89. PMID 11527465 DOI: 10.1006/Mpev.2001.0976  1
2001 Williams ST, Knowlton N. Mitochondrial pseudogenes are pervasive and often insidious in the snapping shrimp genus Alpheus. Molecular Biology and Evolution. 18: 1484-93. PMID 11470839 DOI: 10.1093/Oxfordjournals.Molbev.A003934  1
2001 Knowlton N. Ecology. Coral reef biodiversity--habitat size matters. Science (New York, N.Y.). 292: 1493-5. PMID 11379628 DOI: 10.1126/Science.1061690  1
2001 Knowlton N. The future of coral reefs. Proceedings of the National Academy of Sciences of the United States of America. 98: 5419-25. PMID 11344288 DOI: 10.1073/Pnas.091092998  1
2001 Knowlton N. Sea urchin recovery from mass mortality: new hope for Caribbean coral reefs? Proceedings of the National Academy of Sciences of the United States of America. 98: 4822-4. PMID 11320228 DOI: 10.1073/Pnas.091107198  1
2001 Rohwer F, Breitbart M, Jara J, Azam F, Knowlton N. Diversity of bacteria associated with the Caribbean coral Montastraea franksi Coral Reefs. 20: 85-91. DOI: 10.1007/S003380100138  1
2001 Knowlton N. Who are the players on coral reefs and does it matter? The importance of coral taxonomy for coral reef management Bulletin of Marine Science. 69: 305-308.  1
2000 Knowlton N. Molecular genetic analyses of species boundaries in the sea Hydrobiologia. 420: 73-90. DOI: 10.1007/978-94-017-2184-4_8  1
1999 Killingback T, Doebeli M, Knowlton N. Variable investment, the Continuous Prisoner's Dilemma, and the origin of cooperation. Proceedings. Biological Sciences / the Royal Society. 266: 1723-8. PMID 10518320 DOI: 10.1098/Rspb.1999.0838  1
1999 Herre EA, Knowlton N, Mueller UG, Rehner SA. The evolution of mutualisms: exploring the paths between conflict and cooperation. Trends in Ecology & Evolution. 14: 49-53. PMID 10234251 DOI: 10.1016/S0169-5347(98)01529-8  1
1999 Lopez JV, Kersanach R, Rehner SA, Knowlton N. Molecular determination of species boundaries in corals: genetic analysis of the Montastraea annularis complex using amplified fragment length polymorphisms and a microsatellite marker. The Biological Bulletin. 196: 80-93. PMID 10065530 DOI: 10.2307/1543170  1
1998 Doebeli M, Knowlton N. The evolution of interspecific mutualisms. Proceedings of the National Academy of Sciences of the United States of America. 95: 8676-80. PMID 9671737 DOI: 10.1073/Pnas.95.15.8676  1
1998 Knowlton N, Weigt LA. New dates and new rates for divergence across the Isthmus of Panama Proceedings of the Royal Society B: Biological Sciences. 265: 2257-2263. DOI: 10.1098/Rspb.1998.0568  1
1997 Rowan R, Knowlton N, Baker A, Jara J. Landscape ecology of algal symbionts creates variation in episodes of coral bleaching. Nature. 388: 265-9. PMID 9230434 DOI: 10.1038/40843  1
1997 Knowlton N, Mate JL, Guzman HM, Rowan R, Jara J. Direct evidence for reproductive isolation among the three species of the Montastraea annularis complex in Central America (Panama and Honduras) Marine Biology. 127: 705-711. DOI: 10.1007/S002270050061  1
1995 Rowan R, Knowlton N. Intraspecific diversity and ecological zonation in coral-algal symbiosis. Proceedings of the National Academy of Sciences of the United States of America. 92: 2850-3. PMID 7708736 DOI: 10.1073/Pnas.92.7.2850  1
1994 Knowlton N, Jackson JB. Reply from N. Knowlton and j.B.C. Jackson. Trends in Ecology & Evolution. 9: 398. PMID 21236901 DOI: 10.1016/0169-5347(94)90064-7  1
1994 Knowlton N, Jackson JB. New taxonomy and niche partitioning on coral reefs: jack of all trades or master of some? Trends in Ecology & Evolution. 9: 7-9. PMID 21236753 DOI: 10.1016/0169-5347(94)90224-0  1
1994 Weil E, Knowlton N. A multi-character analysis of the Caribbean coral Montastraea annularis (Ellis and Solander, 1786) and its two sibling species, M.faveolata (Ellis and Solander, 1786) and M.franksi (Gregory, 1895) Bulletin of Marine Science. 55: 151-175.  1
1993 Knowlton N, Weigt LA, Solórzano LA, Mills DK, Bermingham E. Divergence in proteins, mitochondrial DNA, and reproductive compatibility across the isthmus of Panama. Science (New York, N.Y.). 260: 1629-32. PMID 8503007 DOI: 10.1126/Science.8503007  1
1993 Knowlton N. Sibling species in the sea Annual Review of Ecology and Systematics. 24: 189-216. DOI: 10.1146/Annurev.Es.24.110193.001201  1
1992 Knowlton N, Weil E, Weigt LA, Guzmán HM. Sibling Species in Montastraea annularis, Coral Bleaching, and the Coral Climate Record. Science (New York, N.Y.). 255: 330-3. PMID 17779583 DOI: 10.1126/Science.255.5042.330  1
1992 Knowlton N. Thresholds and multiple stable states in coral reef community dynamics Integrative and Comparative Biology. 32: 674-682. DOI: 10.1093/Icb/32.6.674  1
1992 Knowlton N, Mills DEK. The systematic importance of color and color pattern: evidence for complexes of sibling species of snapping shrimp (Caridea: Alpheidae: Alpheus) from the Caribbean and Pacific coasts of Panama Proceedings - San Diego Society of Natural History. 9.  1
1985 Knowlton N, Keller BD. Two more sibling species of alpheid shrimps associated with the Caribbean sea anemones Bartholomea annulata and Heteractis lucida Bulletin of Marine Science. 37: 893-904.  1
1983 Knowlton N, Keller BD. A new, sibling species of snapping shrimp associated with the Caribbean sea anemone Bartholomea annulata ( Alpheus armatus/immaculatus) Bulletin of Marine Science. 33: 353-362.  1
1982 Knowlton N, Keller BD. Symmetric fights as a measure of escalation potential in a symbiotic, territorial snapping shrimp Behavioral Ecology and Sociobiology. 10: 289-292. DOI: 10.1007/Bf00302819  1
1981 Woodley JD, Chornesky EA, Clifford PA, Jackson JB, Kaufman LS, Knowlton N, Lang JC, Pearson MP, Porter JW, Rooney MC, Rylaarsdam KW, Tunnicliffe VJ, Wahle CM, Wulff JL, Curtis AS, et al. Hurricane Allen's Impact on Jamaican Coral Reefs. Science (New York, N.Y.). 214: 749-55. PMID 17744383 DOI: 10.1126/Science.214.4522.749  1
1981 Knowlton N, Lang JC, Christine Rooney M, Clifford P. Evidence for delayed mortality in hurricane-damaged Jamaican staghorn corals Nature. 294: 251-252. DOI: 10.1038/294251A0  1
1980 Parker GA, Knowlton N. The evolution of territory size-some ESS models. Journal of Theoretical Biology. 84: 445-76. PMID 7191938 DOI: 10.1016/S0022-5193(80)80014-2  1
1979 Knowlton N, Parker GA. An evolutionarily stable strategy approach to indiscriminate spite. Nature. 279: 419-21. PMID 16068175 DOI: 10.1038/279419A0  1
1979 Knowlton N. Reproductive synchrony, parental investment, and the evolutionary dynamics of sexual selection Animal Behaviour. 27: 1022-1033. DOI: 10.1016/0003-3472(79)90049-6  1
1974 Knowlton N. A note on the evolution of gamete dimorphism. Journal of Theoretical Biology. 46: 283-5. PMID 4850251 DOI: 10.1016/0022-5193(74)90153-2  1
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