| Year |
Citation |
Score |
| 2024 |
Beckett SJ, Demory D, Coenen AR, Casey JR, Dugenne M, Follett CL, Connell P, Carlson MCG, Hu SK, Wilson ST, Muratore D, Rodriguez-Gonzalez RA, Peng S, Becker KW, Mende DR, ... ... Weitz JS, et al. Disentangling top-down drivers of mortality underlying diel population dynamics of Prochlorococcus in the North Pacific Subtropical Gyre. Nature Communications. 15: 2105. PMID 38453897 DOI: 10.1038/s41467-024-46165-3 |
0.753 |
|
| 2020 |
Yanni D, Jacobeen S, Márquez-Zacarías P, Weitz JS, Ratcliff WC, Yunker PJ. Topological constraints in early multicellularity favor reproductive division of labor. Elife. 9. PMID 32940598 DOI: 10.7554/Elife.54348 |
0.331 |
|
| 2020 |
Park SW, Bolker BM, Champredon D, Earn DJD, Li M, Weitz JS, Grenfell BT, Dushoff J. Reconciling early-outbreak estimates of the basic reproductive number and its uncertainty: framework and applications to the novel coronavirus (SARS-CoV-2) outbreak. Journal of the Royal Society, Interface. 17: 20200144. PMID 32693748 DOI: 10.1098/Rsif.2020.0144 |
0.303 |
|
| 2020 |
Coenen AR, Hu SK, Luo E, Muratore D, Weitz JS. A Primer for Microbiome Time-Series Analysis. Frontiers in Genetics. 11: 310. PMID 32373155 DOI: 10.3389/Fgene.2020.00310 |
0.314 |
|
| 2020 |
Li G, Cortez MH, Dushoff J, Weitz JS. When to be temperate: on the fitness benefits of lysis vs. lysogeny Virus Evolution. 6. DOI: 10.1093/Ve/Veaa042 |
0.336 |
|
| 2019 |
Lin YH, Weitz JS. Spatial Interactions and Oscillatory Tragedies of the Commons. Physical Review Letters. 122: 148102. PMID 31050474 DOI: 10.1103/Physrevlett.122.148102 |
0.301 |
|
| 2019 |
Talmy D, Beckett SJ, Zhang AB, Taniguchi DAA, Weitz JS, Follows MJ. Contrasting Controls on Microzooplankton Grazing and Viral Infection of Microbial Prey Frontiers in Marine Science. 6. DOI: 10.3389/Fmars.2019.00182 |
0.307 |
|
| 2018 |
Beckett SJ, Weitz JS. The Effect of Strain Level Diversity on Robust Inference of Virus-Induced Mortality of Phytoplankton. Frontiers in Microbiology. 9: 1850. PMID 30233501 DOI: 10.3389/Fmicb.2018.01850 |
0.319 |
|
| 2018 |
Munson-McGee JH, Peng S, Dewerff S, Stepanauskas R, Whitaker RJ, Weitz JS, Young MJ. A virus or more in (nearly) every cell: ubiquitous networks of virus-host interactions in extreme environments. The Isme Journal. PMID 29467398 DOI: 10.1038/S41396-018-0071-7 |
0.319 |
|
| 2017 |
Zehr JP, Weitz JS, Joint I. How microbes survive in the open ocean. Science (New York, N.Y.). 357: 646-647. PMID 28818930 DOI: 10.1126/Science.Aan5764 |
0.312 |
|
| 2017 |
Paarporn K, Eksin C, Weitz JS, Shamma JS. Networked SIS Epidemics With Awareness Ieee Transactions On Computational Social Systems. 4: 93-103. DOI: 10.1109/Tcss.2017.2719585 |
0.305 |
|
| 2016 |
Bucksch A, Das A, Schneider H, Merchant N, Weitz JS. Overcoming the Law of the Hidden in Cyberinfrastructures. Trends in Plant Science. PMID 28027865 DOI: 10.1016/J.Tplants.2016.11.014 |
0.745 |
|
| 2016 |
Jover LF, Romberg J, Weitz JS. Inferring phage-bacteria infection networks from time-series data. Royal Society Open Science. 3: 160654. PMID 28018655 DOI: 10.1098/Rsos.160654 |
0.339 |
|
| 2016 |
Leung CY, Weitz JS. Conflicting attachment and the growth of bipartite networks. Physical Review. E. 93: 032303. PMID 27078362 DOI: 10.1103/Physreve.93.032303 |
0.331 |
|
| 2015 |
Jover LF, Flores CO, Cortez MH, Weitz JS. Multiple regimes of robust patterns between network structure and biodiversity. Scientific Reports. 5: 17856. PMID 26632996 DOI: 10.1038/Srep17856 |
0.339 |
|
| 2015 |
Das A, Schneider H, Burridge J, Ascanio AK, Wojciechowski T, Topp CN, Lynch JP, Weitz JS, Bucksch A. Digital imaging of root traits (DIRT): a high-throughput computing and collaboration platform for field-based root phenomics. Plant Methods. 11: 51. PMID 26535051 DOI: 10.1186/S13007-015-0093-3 |
0.769 |
|
| 2015 |
Weitz JS, Stock CA, Wilhelm SW, Bourouiba L, Coleman ML, Buchan A, Follows MJ, Fuhrman JA, Jover LF, Lennon JT, Middelboe M, Sonderegger DL, Suttle CA, Taylor BP, Frede Thingstad T, et al. A multitrophic model to quantify the effects of marine viruses on microbial food webs and ecosystem processes. The Isme Journal. 9: 1352-64. PMID 25635642 DOI: 10.1038/Ismej.2014.220 |
0.321 |
|
| 2015 |
Flores CO, Poisot T, Valverde S, Weitz JS. BiMat: A MATLAB package to facilitate the analysis of bipartite networks Methods in Ecology and Evolution. DOI: 10.1111/2041-210X.12458 |
0.319 |
|
| 2014 |
Price CA, Weitz JS. Costs and benefits of reticulate leaf venation. Bmc Plant Biology. 14: 234. PMID 25234042 DOI: 10.1186/S12870-014-0234-2 |
0.549 |
|
| 2014 |
Bucksch A, Burridge J, York LM, Das A, Nord E, Weitz JS, Lynch JP. Image-based high-throughput field phenotyping of crop roots. Plant Physiology. 166: 470-86. PMID 25187526 DOI: 10.1104/Pp.114.243519 |
0.764 |
|
| 2014 |
Deng L, Ignacio-Espinoza JC, Gregory AC, Poulos BT, Weitz JS, Hugenholtz P, Sullivan MB. Viral tagging reveals discrete populations in Synechococcus viral genome sequence space. Nature. 513: 242-5. PMID 25043051 DOI: 10.1038/Nature13459 |
0.324 |
|
| 2014 |
Cortez MH, Weitz JS. Coevolution can reverse predator-prey cycles. Proceedings of the National Academy of Sciences of the United States of America. 111: 7486-91. PMID 24799689 DOI: 10.1073/Pnas.1317693111 |
0.309 |
|
| 2014 |
Das A, Bucksch A, Price CA, Weitz JS. ClearedLeavesDB: an online database of cleared plant leaf images. Plant Methods. 10: 8. PMID 24678985 DOI: 10.1186/1746-4811-10-8 |
0.751 |
|
| 2014 |
Bucksch A, Turk G, Weitz JS. The fiber walk: a model of tip-driven growth with lateral expansion. Plos One. 9: e85585. PMID 24465607 DOI: 10.1371/Journal.Pone.0085585 |
0.732 |
|
| 2014 |
Price CA, Munro PR, Weitz JS. Estimates of leaf vein density are scale dependent. Plant Physiology. 164: 173-80. PMID 24259686 DOI: 10.1104/Pp.113.224451 |
0.597 |
|
| 2013 |
Jover LF, Cortez MH, Weitz JS. Mechanisms of multi-strain coexistence in host-phage systems with nested infection networks. Journal of Theoretical Biology. 332: 65-77. PMID 23608631 DOI: 10.1016/J.Jtbi.2013.04.011 |
0.33 |
|
| 2013 |
Topp CN, Iyer-Pascuzzi AS, Anderson JT, Lee CR, Zurek PR, Symonova O, Zheng Y, Bucksch A, Mileyko Y, Galkovskyi T, Moore BT, Harer J, Edelsbrunner H, Mitchell-Olds T, Weitz JS, et al. 3D phenotyping and quantitative trait locus mapping identify core regions of the rice genome controlling root architecture. Proceedings of the National Academy of Sciences of the United States of America. 110: E1695-704. PMID 23580618 DOI: 10.1073/Pnas.1304354110 |
0.782 |
|
| 2013 |
Haegeman B, Hamelin J, Moriarty J, Neal P, Dushoff J, Weitz JS. Robust estimation of microbial diversity in theory and in practice. The Isme Journal. 7: 1092-101. PMID 23407313 DOI: 10.1038/Ismej.2013.10 |
0.302 |
|
| 2013 |
Fang S, Clark RT, Zheng Y, Iyer-Pascuzzi AS, Weitz JS, Kochian LV, Edelsbrunner H, Liao H, Benfey PN. Genotypic recognition and spatial responses by rice roots. Proceedings of the National Academy of Sciences of the United States of America. 110: 2670-5. PMID 23362379 DOI: 10.1073/Pnas.1222821110 |
0.345 |
|
| 2013 |
Mitchell GJ, Wiesenfeld K, Nelson DC, Weitz JS. Critical cell wall hole size for lysis in Gram-positive bacteria. Journal of the Royal Society, Interface / the Royal Society. 10: 20120892. PMID 23303219 DOI: 10.1098/Rsif.2012.0892 |
0.672 |
|
| 2013 |
Weitz JS, Poisot T, Meyer JR, Flores CO, Valverde S, Sullivan MB, Hochberg ME. Phage-bacteria infection networks. Trends in Microbiology. 21: 82-91. PMID 23245704 DOI: 10.1016/J.Tim.2012.11.003 |
0.665 |
|
| 2013 |
Flores CO, Valverde S, Weitz JS. Multi-scale structure and geographic drivers of cross-infection within marine bacteria and phages. The Isme Journal. 7: 520-32. PMID 23178671 DOI: 10.1038/Ismej.2012.135 |
0.666 |
|
| 2013 |
Cohen RE, Weitz JS. The Melting Curve and Premelting of MgO Geophysical Monograph. 101: 185-196. DOI: 10.1029/Gm101P0185 |
0.472 |
|
| 2012 |
Jiang X, Langille MG, Neches RY, Elliot M, Levin SA, Eisen JA, Weitz JS, Dushoff J. Functional biogeography of ocean microbes revealed through non-negative matrix factorization. Plos One. 7: e43866. PMID 23049741 DOI: 10.1371/Journal.Pone.0043866 |
0.595 |
|
| 2012 |
Price CA, Weitz JS, Savage VM, Stegen J, Clarke A, Coomes DA, Dodds PS, Etienne RS, Kerkhoff AJ, McCulloh K, Niklas KJ, Olff H, Swenson NG, Chave J. Testing the metabolic theory of ecology. Ecology Letters. 15: 1465-74. PMID 22931542 DOI: 10.1111/J.1461-0248.2012.01860.X |
0.557 |
|
| 2012 |
Galkovskyi T, Mileyko Y, Bucksch A, Moore B, Symonova O, Price CA, Topp CN, Iyer-Pascuzzi AS, Zurek PR, Fang S, Harer J, Benfey PN, Weitz JS. GiA Roots: software for the high throughput analysis of plant root system architecture. Bmc Plant Biology. 12: 116. PMID 22834569 DOI: 10.1186/1471-2229-12-116 |
0.774 |
|
| 2012 |
Mileyko Y, Edelsbrunner H, Price CA, Weitz JS. Hierarchical ordering of reticular networks. Plos One. 7: e36715. PMID 22701559 DOI: 10.1371/Journal.Pone.0036715 |
0.544 |
|
| 2012 |
Price CA, Weitz JS. Allometric covariation: a hallmark behavior of plants and leaves. The New Phytologist. 193: 882-9. PMID 22403825 DOI: 10.1111/J.1469-8137.2011.04022.X |
0.617 |
|
| 2012 |
Meyer JR, Dobias DT, Weitz JS, Barrick JE, Quick RT, Lenski RE. Repeatability and contingency in the evolution of a key innovation in phage lambda. Science (New York, N.Y.). 335: 428-32. PMID 22282803 DOI: 10.1126/Science.1214449 |
0.524 |
|
| 2012 |
Price CA, Wing S, Weitz JS. Scaling and structure of dicotyledonous leaf venation networks. Ecology Letters. 15: 87-95. PMID 22093803 DOI: 10.1111/J.1461-0248.2011.01712.X |
0.582 |
|
| 2012 |
Jiang X, Weitz JS, Dushoff J. A non-negative matrix factorization framework for identifying modular patterns in metagenomic profile data. Journal of Mathematical Biology. 64: 697-711. PMID 21630089 DOI: 10.1007/S00285-011-0428-2 |
0.308 |
|
| 2011 |
Menge DN, Ballantyne F, Weitz JS. Dynamics of nutrient uptake strategies: lessons from the tortoise and the hare. Theoretical Ecology. 4: 163-177. PMID 25540674 DOI: 10.1007/S12080-010-0110-0 |
0.308 |
|
| 2011 |
Flores CO, Meyer JR, Valverde S, Farr L, Weitz JS. Statistical structure of host-phage interactions. Proceedings of the National Academy of Sciences of the United States of America. 108: E288-97. PMID 21709225 DOI: 10.1073/Pnas.1101595108 |
0.655 |
|
| 2011 |
Kislyuk AO, Haegeman B, Bergman NH, Weitz JS. Genomic fluidity: an integrative view of gene diversity within microbial populations. Bmc Genomics. 12: 32. PMID 21232151 DOI: 10.1186/1471-2164-12-32 |
0.754 |
|
| 2011 |
Price CA, Symonova O, Mileyko Y, Hilley T, Weitz JS. Leaf extraction and analysis framework graphical user interface: segmenting and analyzing the structure of leaf veins and areoles. Plant Physiology. 155: 236-45. PMID 21057114 DOI: 10.1104/Pp.110.162834 |
0.593 |
|
| 2010 |
Price CA, Weitz JS. Zero-sum allocational strategies determine the allometry of specific leaf area. American Journal of Botany. 97: 1808-15. PMID 21616820 DOI: 10.3732/Ajb.1000118 |
0.592 |
|
| 2010 |
Mitchell GJ, Nelson DC, Weitz JS. Quantifying enzymatic lysis: estimating the combined effects of chemistry, physiology and physics. Physical Biology. 7: 046002. PMID 20921589 DOI: 10.1088/1478-3975/7/4/046002 |
0.684 |
|
| 2010 |
Price CA, Gilooly JF, Allen AP, Weitz JS, Niklas KJ. The metabolic theory of ecology: prospects and challenges for plant biology. The New Phytologist. 188: 696-710. PMID 20819176 DOI: 10.1111/J.1469-8137.2010.03442.X |
0.612 |
|
| 2010 |
Gudelj I, Weitz JS, Ferenci T, Claire Horner-Devine M, Marx CJ, Meyer JR, Forde SE. An integrative approach to understanding microbial diversity: from intracellular mechanisms to community structure. Ecology Letters. 13: 1073-84. PMID 20576029 DOI: 10.1111/J.1461-0248.2010.01507.X |
0.337 |
|
| 2010 |
Iyer-Pascuzzi AS, Symonova O, Mileyko Y, Hao Y, Belcher H, Harer J, Weitz JS, Benfey PN. Imaging and analysis platform for automatic phenotyping and trait ranking of plant root systems. Plant Physiology. 152: 1148-57. PMID 20107024 DOI: 10.1104/Pp.109.150748 |
0.393 |
|
| 2009 |
Kislyuk A, Bhatnagar S, Dushoff J, Weitz JS. Unsupervised statistical clustering of environmental shotgun sequences. Bmc Bioinformatics. 10: 316. PMID 19799776 DOI: 10.1186/1471-2105-10-316 |
0.745 |
|
| 2009 |
Price CA, Ogle K, White EP, Weitz JS. Evaluating scaling models in biology using hierarchical Bayesian approaches. Ecology Letters. 12: 641-51. PMID 19453621 DOI: 10.1111/J.1461-0248.2009.01316.X |
0.578 |
|
| 2008 |
Mileyko Y, Joh RI, Weitz JS. Small-scale copy number variation and large-scale changes in gene expression. Proceedings of the National Academy of Sciences of the United States of America. 105: 16659-64. PMID 18946033 DOI: 10.1073/Pnas.0806239105 |
0.3 |
|
| 2008 |
Weitz JS. Evolutionary ecology of bacterial viruses Microbe. 3: 171-178. DOI: 10.1128/Microbe.3.171.1 |
0.354 |
|
| 2008 |
Weitz JS, Dushoff J. Alternative stable states in host - Phage dynamics Theoretical Ecology. 1: 13-19. DOI: 10.1007/S12080-007-0001-1 |
0.313 |
|
| 2007 |
Baskett ML, Weitz JS, Levin SA. The evolution of dispersal in reserve networks. The American Naturalist. 170: 59-78. PMID 17853992 DOI: 10.1086/518184 |
0.692 |
|
| 2007 |
Muneepeerakul R, Weitz JS, Levin SA, Rinaldo A, Rodriguez-Iturbe I. A neutral metapopulation model of biodiversity in river networks. Journal of Theoretical Biology. 245: 351-63. PMID 17109896 DOI: 10.1016/J.Jtbi.2006.10.005 |
0.505 |
|
| 2006 |
Weitz JS, Levin SA. Size and scaling of predator-prey dynamics. Ecology Letters. 9: 548-57. PMID 16643300 DOI: 10.1111/J.1461-0248.2006.00900.X |
0.488 |
|
| 2006 |
Weitz JS, Ogle K, Horn HS. Ontogenetically stable hydraulic design in woody plants Functional Ecology. 20: 191-199. DOI: 10.1111/J.1365-2435.2006.01083.X |
0.34 |
|
| 2005 |
Weitz JS, Hartman H, Levin SA. Coevolutionary arms races between bacteria and bacteriophage. Proceedings of the National Academy of Sciences of the United States of America. 102: 9535-40. PMID 15976021 DOI: 10.1073/Pnas.0504062102 |
0.507 |
|
| 2005 |
Pie MR, Weitz JS. A null model of morphospace occupation. The American Naturalist. 166: E1-13. PMID 15937783 DOI: 10.1086/430727 |
0.302 |
|
| 2004 |
Weitz JS, Rothman DH. Dynamics of a contact process with ontogeny. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 70: 021915. PMID 15447523 DOI: 10.1103/Physreve.70.021915 |
0.578 |
|
| 2003 |
Weitz JS, Rothman DH. Scale-dependence of resource-biodiversity relationships. Journal of Theoretical Biology. 225: 205-14. PMID 14575654 DOI: 10.1016/S0022-5193(03)00239-X |
0.594 |
|
| 2001 |
Dodds PS, Rothman DH, Weitz JS. Re-examination of the "3/4-law" of metabolism. Journal of Theoretical Biology. 209: 9-27. PMID 11237567 DOI: 10.1006/Jtbi.2000.2238 |
0.542 |
|
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