☰

Ryan J. Newton, Ph.D. - Publications

Affiliations: 
2008 University of Wisconsin, Madison, Madison, WI 
Area:
Microbiology Biology, Limnology Biology
Tree Info Similar researchers PubMed Report error

40 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Roguet A, Newton RJ, Eren AM, McLellan SL. Guts of the Urban Ecosystem: Microbial Ecology of Sewer Infrastructure. Msystems. e0011822. PMID 35762794 DOI: 10.1128/msystems.00118-22  0.37
2022 Podowski JC, Paver SF, Newton RJ, Coleman ML. Genome Streamlining, Proteorhodopsin, and Organic Nitrogen Metabolism in Freshwater Nitrifiers. Mbio. e0237921. PMID 35435701 DOI: 10.1128/mbio.02379-21  0.323
2021 McClary-Gutierrez JS, Driscoll Z, Nenn C, Newton RJ. Human Fecal Contamination Corresponds to Changes in the Freshwater Bacterial Communities of a Large River Basin. Microbiology Spectrum. e0120021. PMID 34494860 DOI: 10.1128/Spectrum.01200-21  0.344
2021 LaMartina EL, Mohaimani AA, Newton RJ. Urban wastewater bacterial communities assemble into seasonal steady states. Microbiome. 9: 116. PMID 34016155 DOI: 10.1186/s40168-021-01038-5  0.306
2019 Paver SF, Newton RJ, Coleman ML. Microbial communities of the Laurentian Great Lakes reflect connectivity and local biogeochemistry. Environmental Microbiology. PMID 31736217 DOI: 10.1111/1462-2920.14862  0.377
2019 Bartelme RP, Smith MC, Sepulveda-Villet OJ, Newton RJ. Component Microenvironments and System Biogeography Structure Microorganism Distributions in Recirculating Aquaculture and Aquaponic Systems. Msphere. 4. PMID 31270175 DOI: 10.1128/mSphere.00143-19  0.757
2018 Paver SF, Muratore D, Newton RJ, Coleman ML. Reevaluating the Salty Divide: Phylogenetic Specificity of Transitions between Marine and Freshwater Systems. Msystems. 3. PMID 30443603 DOI: 10.1128/mSystems.00232-18  0.364
2018 Rohwer RR, Hamilton JJ, Newton RJ, McMahon KD. TaxAss: Leveraging a Custom Freshwater Database Achieves Fine-Scale Taxonomic Resolution. Msphere. 3. PMID 30185512 DOI: 10.1128/mSphere.00327-18  0.719
2018 Bartelme RP, Barbier P, Lipscomb RS, LaPatra SE, Newton RJ, Evenhuis JP, McBride MJ. Draft Genome Sequence of the Fish Pathogen Flavobacterium columnare Strain MS-FC-4. Genome Announcements. 6. PMID 29773635 DOI: 10.1128/genomeA.00429-18  0.724
2018 Bartelme RP, Oyserman BO, Blom JE, Sepulveda-Villet OJ, Newton RJ. Stripping Away the Soil: Plant Growth Promoting Microbiology Opportunities in Aquaponics. Frontiers in Microbiology. 9: 8. PMID 29403461 DOI: 10.3389/fmicb.2018.00008  0.683
2017 Bartelme RP, McLellan SL, Newton RJ. Freshwater Recirculating Aquaculture System Operations Drive Biofilter Bacterial Community Shifts around a Stable Nitrifying Consortium of Ammonia-Oxidizing Archaea and Comammox Nitrospira. Frontiers in Microbiology. 8: 101. PMID 28194147 DOI: 10.3389/Fmicb.2017.00101  0.757
2016 Bartelme RP, Newton RJ, Zhu Y, Li N, LaFrentz BR, McBride MJ. Complete Genome Sequence of the Fish Pathogen Flavobacterium columnare Strain C#2. Genome Announcements. 4. PMID 27340080 DOI: 10.1128/Genomea.00624-16  0.737
2016 Graham EB, Knelman JE, Schindlbacher A, Siciliano S, Breulmann M, Yannarell A, Beman JM, Abell G, Philippot L, Prosser J, Foulquier A, Yuste JC, Glanville HC, Jones DL, Angel R, ... ... Newton RJ, et al. Microbes as Engines of Ecosystem Function: When Does Community Structure Enhance Predictions of Ecosystem Processes? Frontiers in Microbiology. 7: 214. PMID 26941732 DOI: 10.3389/Fmicb.2016.00214  0.452
2016 Bendall ML, Stevens SL, Chan LK, Malfatti S, Schwientek P, Tremblay J, Schackwitz W, Martin J, Pati A, Bushnell B, Froula J, Kang D, Tringe SG, Bertilsson S, Moran MA, ... ... Newton RJ, et al. Genome-wide selective sweeps and gene-specific sweeps in natural bacterial populations. The Isme Journal. PMID 26744812 DOI: 10.1038/Ismej.2015.241  0.752
2016 Newton R, Shade A. Lifestyles of rarity: understanding heterotrophic strategies to inform the ecology of the microbial rare biosphere Aquatic Microbial Ecology. 78: 51-63. DOI: 10.3354/Ame01801  0.623
2015 MacLellan SL, Fisher JC, Newton RJ. The microbiome of urban waters. International Microbiology : the Official Journal of the Spanish Society For Microbiology. 18: 141-9. PMID 27036741 DOI: 10.2436/20.1501.01.244  0.387
2015 Fisher JC, Newton RJ, Dila DK, McLellan SL. Urban microbial ecology of a freshwater estuary of Lake Michigan. Elementa (Washington, D.C.). 3. PMID 26866046 DOI: 10.12952/journal.elementa.000064  0.347
2015 Newton RJ, McLellan SL. A unique assemblage of cosmopolitan freshwater bacteria and higher community diversity differentiate an urbanized estuary from oligotrophic Lake Michigan. Frontiers in Microbiology. 6: 1028. PMID 26483766 DOI: 10.3389/Fmicb.2015.01028  0.468
2015 Newton RJ, McLellan SL, Dila DK, Vineis JH, Morrison HG, Eren AM, Sogin ML. Sewage reflects the microbiomes of human populations. Mbio. 6: e02574. PMID 25714718 DOI: 10.1128/Mbio.02574-14  0.396
2015 Eren AM, Sogin ML, Morrison HG, Vineis JH, Fisher JC, Newton RJ, McLellan SL. A single genus in the gut microbiome reflects host preference and specificity. The Isme Journal. 9: 90-100. PMID 24936765 DOI: 10.1038/Ismej.2014.97  0.34
2014 Kappell AD, Wei Y, Newton RJ, Van Nostrand JD, Zhou J, McLellan SL, Hristova KR. The polycyclic aromatic hydrocarbon degradation potential of Gulf of Mexico native coastal microbial communities after the Deepwater Horizon oil spill. Frontiers in Microbiology. 5: 205. PMID 24847320 DOI: 10.3389/Fmicb.2014.00205  0.362
2014 Koskey AM, Fisher JC, Traudt MF, Newton RJ, McLellan SL. Analysis of the gull fecal microbial community reveals the dominance of Catellicoccus marimammalium in relation to culturable Enterococci. Applied and Environmental Microbiology. 80: 757-65. PMID 24242244 DOI: 10.1128/Aem.02414-13  0.434
2013 Newton RJ, Huse SM, Morrison HG, Peake CS, Sogin ML, McLellan SL. Shifts in the microbial community composition of Gulf Coast beaches following beach oiling. Plos One. 8: e74265. PMID 24040219 DOI: 10.1371/Journal.Pone.0074265  0.432
2013 Newton RJ, Bootsma MJ, Morrison HG, Sogin ML, McLellan SL. A microbial signature approach to identify fecal pollution in the waters off an urbanized coast of Lake Michigan. Microbial Ecology. 65: 1011-23. PMID 23475306 DOI: 10.1007/S00248-013-0200-9  0.413
2013 McLellan SL, Newton RJ, Vandewalle JL, Shanks OC, Huse SM, Eren AM, Sogin ML. Sewage reflects the distribution of human faecal Lachnospiraceae. Environmental Microbiology. 15: 2213-27. PMID 23438335 DOI: 10.1111/1462-2920.12092  0.439
2013 Shanks OC, Newton RJ, Kelty CA, Huse SM, Sogin ML, McLellan SL. Comparison of the microbial community structures of untreated wastewaters from different geographic locales. Applied and Environmental Microbiology. 79: 2906-13. PMID 23435885 DOI: 10.1128/Aem.03448-12  0.467
2012 Jones SE, Cadkin TA, Newton RJ, McMahon KD. Spatial and temporal scales of aquatic bacterial beta diversity. Frontiers in Microbiology. 3: 318. PMID 22969757 DOI: 10.3389/Fmicb.2012.00318  0.705
2011 Newton RJ, Vandewalle JL, Borchardt MA, Gorelick MH, McLellan SL. Lachnospiraceae and Bacteroidales alternative fecal indicators reveal chronic human sewage contamination in an urban harbor. Applied and Environmental Microbiology. 77: 6972-81. PMID 21803887 DOI: 10.1128/Aem.05480-11  0.373
2011 Shanks OC, Kelty CA, Archibeque S, Jenkins M, Newton RJ, McLellan SL, Huse SM, Sogin ML. Community structures of fecal bacteria in cattle from different animal feeding operations. Applied and Environmental Microbiology. 77: 2992-3001. PMID 21378055 DOI: 10.1128/Aem.02988-10  0.431
2011 Newton RJ, Jones SE, Eiler A, McMahon KD, Bertilsson S. A guide to the natural history of freshwater lake bacteria. Microbiology and Molecular Biology Reviews : Mmbr. 75: 14-49. PMID 21372319 DOI: 10.1128/Mmbr.00028-10  0.707
2011 Newton RJ, McMahon KD. Seasonal differences in bacterial community composition following nutrient additions in a eutrophic lake. Environmental Microbiology. 13: 887-99. PMID 21138514 DOI: 10.1111/J.1462-2920.2010.02387.X  0.654
2010 Seyfried EE, Newton RJ, Rubert KF, Pedersen JA, McMahon KD. Occurrence of tetracycline resistance genes in aquaculture facilities with varying use of oxytetracycline. Microbial Ecology. 59: 799-807. PMID 20217406 DOI: 10.1007/S00248-009-9624-7  0.557
2010 Newton RJ, Griffin LE, Bowles KM, Meile C, Gifford S, Givens CE, Howard EC, King E, Oakley CA, Reisch CR, Rinta-Kanto JM, Sharma S, Sun S, Varaljay V, Vila-Costa M, et al. Genome characteristics of a generalist marine bacterial lineage. The Isme Journal. 4: 784-98. PMID 20072162 DOI: 10.1038/Ismej.2009.150  0.401
2009 Jones SE, Newton RJ, McMahon KD. Evidence for structuring of bacterial community composition by organic carbon source in temperate lakes. Environmental Microbiology. 11: 2463-72. PMID 19558514 DOI: 10.1111/J.1462-2920.2009.01977.X  0.694
2008 Jones SE, Newton RJ, McMahon KD. Potential for atmospheric deposition of bacteria to influence bacterioplankton communities. Fems Microbiology Ecology. 64: 388-94. PMID 18393990 DOI: 10.1111/J.1574-6941.2008.00476.X  0.714
2007 Newton RJ, Jones SE, Helmus MR, McMahon KD. Phylogenetic ecology of the freshwater Actinobacteria acI lineage. Applied and Environmental Microbiology. 73: 7169-76. PMID 17827330 DOI: 10.1128/Aem.00794-07  0.718
2007 Shade A, Kent AD, Jones SE, Newton RJ, Triplett EW, McMahon KD. Interannual dynamics and phenology of bacterial communities in a eutrophic lake Limnology and Oceanography. 52: 487-494. DOI: 10.4319/Lo.2007.52.2.0487  0.764
2006 Kent AD, Jones SE, Lauster GH, Graham JM, Newton RJ, McMahon KD. Experimental manipulations of microbial food web interactions in a humic lake: shifting biological drivers of bacterial community structure. Environmental Microbiology. 8: 1448-59. PMID 16872407 DOI: 10.1111/J.1462-2920.2006.01039.X  0.725
2006 Newton RJ, Kent AD, Triplett EW, McMahon KD. Microbial community dynamics in a humic lake: differential persistence of common freshwater phylotypes. Environmental Microbiology. 8: 956-70. PMID 16689717 DOI: 10.1111/J.1462-2920.2005.00979.X  0.665
2005 Jacob C, Kent AD, Benson BJ, Newton RJ, Triplett EW, McMahon KD. Biological databases for linking large microbial and environmental datasets Wmsci 2005 - the 9th World Multi-Conference On Systemics, Cybernetics and Informatics, Proceedings. 6: 279-282.  0.587
Show low-probability matches.