Shana K. Goffredi, PhD - Publications

Biology Occidental College, Los Angeles, CA, United States 
microbial symbioses with infauna and vent organisms

55 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Goffredi SK, Motooka C, Fike DA, Gusmão LC, Tilic E, Rouse GW, Rodríguez E. Author Correction to: Mixotrophic chemosynthesis in a deep-sea anemone from hydrothermal vents in the Pescadero Basin, Gulf of California. Bmc Biology. 19: 126. PMID 34144714 DOI: 10.1186/s12915-021-01067-4  0.88
2021 Goffredi SK, Motooka C, Fike DA, Gusmão LC, Tilic E, Rouse GW, Rodríguez E. Mixotrophic chemosynthesis in a deep-sea anemone from hydrothermal vents in the Pescadero Basin, Gulf of California. Bmc Biology. 19: 8. PMID 33455582 DOI: 10.1186/s12915-020-00921-1  0.88
2020 Goffredi SK, Tilic E, Mullin SW, Dawson KS, Keller A, Lee RW, Wu F, Levin LA, Rouse GW, Cordes EE, Orphan VJ. Methanotrophic bacterial symbionts fuel dense populations of deep-sea feather duster worms (Sabellida, Annelida) and extend the spatial influence of methane seepage. Science Advances. 6: eaay8562. PMID 32284974 DOI: 10.1126/Sciadv.Aay8562  0.88
2019 Goffredi SK, Girguis PR, Childress JJ, Desaulniers NT. Physiological Functioning of Carbonic Anhydrase in the Hydrothermal Vent Tubeworm Riftia Pachyptila. The Biological Bulletin. 196: 257-264. PMID 28296490 DOI: 10.2307/1542950  1
2018 Michel AJ, Ward LM, Goffredi SK, Dawson KS, Baldassarre DT, Brenner A, Gotanda KM, McCormack JE, Mullin SW, O'Neill A, Tender GS, Uy JAC, Yu K, Orphan VJ, Chaves JA. The gut of the finch: uniqueness of the gut microbiome of the Galápagos vampire finch. Microbiome. 6: 167. PMID 30231937 DOI: 10.1186/S40168-018-0555-8  0.56
2018 Rouse GW, Goffredi SK, Johnson SB, Vrijenhoek RC. An inordinate fondness for Osedax (Siboglinidae: Annelida): Fourteen new species of bone worms from California. Zootaxa. 4377: 451-489. PMID 29690036 DOI: 10.11646/Zootaxa.4377.4.1  0.88
2017 Pasulka AL, Goffredi SK, Tavormina PL, Dawson KS, Levin LA, Rouse GW, Orphan VJ. Colonial Tube-Dwelling Ciliates Influence Methane Cycling and Microbial Diversity within Methane Seep Ecosystems Frontiers in Marine Science. 3. DOI: 10.3389/Fmars.2016.00276  0.88
2015 Abdul Rahman N, Parks DH, Willner DL, Engelbrektson AL, Goffredi SK, Warnecke F, Scheffrahn RH, Hugenholtz P. A molecular survey of Australian and North American termite genera indicates that vertical inheritance is the primary force shaping termite gut microbiomes. Microbiome. 3: 5. PMID 25830022 DOI: 10.1186/S40168-015-0067-8  1
2015 Goffredi SK, Jang GE, Haroon MF. Transcriptomics in the tropics: Total RNA-based profiling of Costa Rican bromeliad-associated communities. Computational and Structural Biotechnology Journal. 13: 18-23. PMID 25755850 DOI: 10.1016/J.Csbj.2014.12.001  1
2014 Ferguson MA, Núñez ME, Kim HJ, Goffredi S, Shamskhou E, Faudree L, Chang E, Landry RM, Ma A, Choi DE, Thomas N, Schmitt J, Spain EM. Spatially Organized Films from Bdellovibrio bacteriovorus Prey Lysates. Applied and Environmental Microbiology. 80: 7405-14. PMID 25239909 DOI: 10.1128/Aem.02423-14  1
2014 Bistolas KS, Sakamoto RI, Fernandes JA, Goffredi SK. Symbiont polyphyly, co-evolution, and necessity in pentatomid stinkbugs from Costa Rica. Frontiers in Microbiology. 5: 349. PMID 25076943 DOI: 10.3389/Fmicb.2014.00349  1
2014 Larson HK, Goffredi SK, Parra EL, Vargas O, Pinto-Tomas AA, McGlynn TP. Distribution and dietary regulation of an associated facultative Rhizobiales-related bacterium in the omnivorous giant tropical ant, Paraponera clavata. Die Naturwissenschaften. 101: 397-406. PMID 24682514 DOI: 10.1007/S00114-014-1168-0  1
2014 Goffredi SK, Yi H, Zhang Q, Klann JE, Struve IA, Vrijenhoek RC, Brown CT. Genomic versatility and functional variation between two dominant heterotrophic symbionts of deep-sea Osedax worms. The Isme Journal. 8: 908-24. PMID 24225886 DOI: 10.1038/Ismej.2013.201  1
2014 Goffredi SK, Gregory A, Jones WJ, Morella NM, Sakamoto RI. Ontogenetic variation in epibiont community structure in the deep-sea yeti crab, Kiwa puravida: convergence among crustaceans. Molecular Ecology. 23: 1457-72. PMID 23952239 DOI: 10.1111/Mec.12439  1
2012 Goffredi SK, Morella NM, Pulcrano ME. Affiliations between bacteria and marine fish leeches (Piscicolidae), with emphasis on a deep-sea species from Monterey Canyon, CA. Environmental Microbiology. 14: 2429-44. PMID 22681178 DOI: 10.1111/J.1462-2920.2012.02798.X  1
2012 Levin LA, Orphan VJ, Rouse GW, Rathburn AE, Ussler W, Cook GS, Goffredi SK, Perez EM, Waren A, Grupe BM, Chadwick G, Strickrott B. A hydrothermal seep on the Costa Rica margin: middle ground in a continuum of reducing ecosystems. Proceedings. Biological Sciences / the Royal Society. 279: 2580-8. PMID 22398162 DOI: 10.1098/Rspb.2012.0205  1
2012 Martin AM, Goffredi SK. 'Pliocardia' krylovata, a new species of vesicomyid clam from cold seeps along the Costa Rica Margin Journal of the Marine Biological Association of the United Kingdom. 92: 1127-1137. DOI: 10.1017/S0025315411000713  1
2011 Goffredi SK, Jang GE, Woodside WT, Ussler W. Bromeliad catchments as habitats for methanogenesis in tropical rainforest canopies. Frontiers in Microbiology. 2: 256. PMID 22207867 DOI: 10.3389/Fmicb.2011.00256  1
2011 Rouse GW, Goffredi SK, Johnson SB, Vrijenhoek RC. Not whale-fall specialists, Osedax worms also consume fishbones. Biology Letters. 7: 736-9. PMID 21490008 DOI: 10.1098/Rsbl.2011.0202  1
2011 Goffredi SK, Kantor AH, Woodside WT. Aquatic microbial habitats within a neotropical rainforest: bromeliads and pH-associated trends in bacterial diversity and composition. Microbial Ecology. 61: 529-42. PMID 21174086 DOI: 10.1007/S00248-010-9781-8  1
2011 Martin AM, Martin GG, Butler R, Goffredi SK. Synthesis of keyhole limpet hemocyanin by the rhogocytes of Megathura crenulata Invertebrate Biology. 130: 302-312. DOI: 10.1111/J.1744-7410.2011.00249.X  1
2010 Goffredi SK. Indigenous ectosymbiotic bacteria associated with diverse hydrothermal vent invertebrates. Environmental Microbiology Reports. 2: 479-88. PMID 23766219 DOI: 10.1111/J.1758-2229.2010.00136.X  1
2010 Goffredi SK, Orphan VJ. Bacterial community shifts in taxa and diversity in response to localized organic loading in the deep sea. Environmental Microbiology. 12: 344-63. PMID 19799620 DOI: 10.1111/J.1462-2920.2009.02072.X  1
2009 Rouse GW, Wilson NG, Goffredi SK, Johnson SB, Smart T, Widmer C, Young CM, Vrijenhoek RC. Spawning and development in Osedax boneworms (Siboglinidae, Annelida) Marine Biology. 156: 395-405. DOI: 10.1007/S00227-008-1091-Z  1
2008 Goffredi SK, Jones WJ, Erhlich H, Springer A, Vrijenhoek RC. Epibiotic bacteria associated with the recently discovered Yeti crab, Kiwa hirsuta. Environmental Microbiology. 10: 2623-34. PMID 18564185 DOI: 10.1111/J.1462-2920.2008.01684.X  1
2008 Pernthaler A, Dekas AE, Brown CT, Goffredi SK, Embaye T, Orphan VJ. Diverse syntrophic partnerships from deep-sea methane vents revealed by direct cell capture and metagenomics. Proceedings of the National Academy of Sciences of the United States of America. 105: 7052-7. PMID 18467493 DOI: 10.1073/Pnas.0711303105  1
2008 Goffredi SK, Wilpiszeski R, Lee R, Orphan VJ. Temporal evolution of methane cycling and phylogenetic diversity of archaea in sediments from a deep-sea whale-fall in Monterey Canyon, California. The Isme Journal. 2: 204-20. PMID 18219285 DOI: 10.1038/Ismej.2007.103  1
2007 Osborn KJ, Rouse GW, Goffredi SK, Robison BH. Description and relationships of Chaetopterus pugaporcinus, an unusual pelagic polychaete (Annelida, Chaetopteridae). The Biological Bulletin. 212: 40-54. PMID 17301330 DOI: 10.2307/25066579  1
2007 Goffredi SK, Johnson SB, Vrijenhoek RC. Genetic diversity and potential function of microbial symbionts associated with newly discovered species of Osedax polychaete worms. Applied and Environmental Microbiology. 73: 2314-23. PMID 17277220 DOI: 10.1128/Aem.01986-06  1
2007 Brand GL, Horak RV, Bris NL, Goffredi SK, Carney SL, Govenar B, Yancey PH. Hypotaurine and thiotaurine as indicators of sulfide exposure in bivalves and vestimentiferans from hydrothermal vents and cold seeps Marine Ecology. 28: 208-218. DOI: 10.1111/J.1439-0485.2006.00113.X  1
2006 Goffredi SK, Jones WJ, Scholin CA, Marin R, Vrijenhoek RC. Molecular detection of marine invertebrate larvae. Marine Biotechnology (New York, N.Y.). 8: 149-60. PMID 16380809 DOI: 10.1007/S10126-005-5016-2  1
2005 Goffredi SK, Orphan VJ, Rouse GW, Jahnke L, Embaye T, Turk K, Lee R, Vrijenhoek RC. Evolutionary innovation: a bone-eating marine symbiosis. Environmental Microbiology. 7: 1369-78. PMID 16104860 DOI: 10.1111/J.1462-2920.2005.00824.X  1
2004 Rouse GW, Goffredi SK, Vrijenhoek RC. Osedax: bone-eating marine worms with dwarf males. Science (New York, N.Y.). 305: 668-71. PMID 15286372 DOI: 10.1126/Science.1098650  1
2004 Goffredi SK, Warén A, Orphan VJ, Van Dover CL, Vrijenhoek RC. Novel forms of structural integration between microbes and a hydrothermal vent gastropod from the Indian Ocean. Applied and Environmental Microbiology. 70: 3082-90. PMID 15128570 DOI: 10.1128/Aem.70.5.3082-3090.2004  1
2004 Seibel BA, Goffredi SK, Thuesen EV, Childress JJ, Robison BH. Ammonium content and buoyancy in midwater cephalopods Journal of Experimental Marine Biology and Ecology. 313: 375-387. DOI: 10.1016/J.Jembe.2004.08.015  1
2004 Goffredi SK, Paull CK, Fulton-Bennett K, Hurtado LA, Vrijenhoek RC. Unusual benthic fauna associated with a whale fall in Monterey Canyon, California Deep-Sea Research Part I: Oceanographic Research Papers. 51: 1295-1306. DOI: 10.1016/J.Dsr.2004.05.009  1
2004 Goffredi SK, Barry JP, Buck KR. Vesicomyid symbioses from Monterey Bay (Central California) cold seeps Symbiosis. 36: 1-27.  1
2003 Warén A, Bengtson S, Goffredi SK, Van Dover CL. A hot-vent gastropod with iron sulfide dermal sclerites. Science (New York, N.Y.). 302: 1007. PMID 14605361 DOI: 10.1126/Science.1087696  1
2003 Drazen JC, Goffredi SK, Schlining B, Stakes DS. Aggregations of egg-brooding deep-sea fish and cephalopods on the Gorda Escarpment: a reproductive hot spot. The Biological Bulletin. 205: 1-7. PMID 12917216 DOI: 10.2307/1543439  1
2003 Orphan VJ, Goffredi SK, Delong EF, Boles JR. Geochemical influence on diversity and microbial processes in high temperature oil reservoirs Geomicrobiology Journal. 20: 295-311. DOI: 10.1080/01490450303898  1
2003 Tréhu AM, Stakes DS, Bartlett CD, Chevallier J, Duncan RA, Goffredi SK, Potter SM, Salamy KA. Seismic and seafloor evidence for free gas, gas hydrates, and fluid seeps on the transform margin offshore Cape Mendocino Journal of Geophysical Research B: Solid Earth. 108: EPM 11-1 - 11-19. DOI: 10.1029/2001Jb001679  1
2003 Van Dover CL, Aharon P, Bernhard JM, Caylor E, Doerries M, Flickinger W, Gilhooly W, Goffredi SK, Knick KE, Macko SA, Rapoport S, Raulfs EC, Ruppel C, Salerno JL, Seitz RD, et al. Blake Ridge methane seeps: Characterization of a soft-sediment, chemosynthetically based ecosystem Deep-Sea Research Part I: Oceanographic Research Papers. 50: 281-300. DOI: 10.1016/S0967-0637(02)00162-0  1
2003 Goffredi SK, Hurtado LA, Hallam S, Vrijenhoek RC. Evolutionary relationships of deep-sea vent and cold seep clams (Mollusca: Vesicomyidae) of the "pacifica/lepta" species complex Marine Biology. 142: 311-320. DOI: 10.1007/S00227-002-0941-3  1
2002 Goffredi SK, Barry JP. Species-specific variation in sulfide physiology between closely related vesicomyid clams Marine Ecology Progress Series. 225: 227-238. DOI: 10.3354/Meps225227  1
2002 Stakes DS, Trehu AM, Goffredi SK, Naehr TH, Duncan RA. Mass wasting, methane venting, and biological communities on the Mendocino transform fault Geology. 30: 407-410. DOI: 10.1130/0091-7613(2002)030<0407:Mwmvab>2.0.Co;2  1
2002 Barry JP, Buck KR, Kochevar RK, Nelson DC, Fujiwara Y, Goffredi SK, Hashimoto J. Methane-based symbiosis in a mussel, Bathymodiolus platifrons, from cold seeps in Sagami Bay, Japan Invertebrate Biology. 121: 47-54. DOI: 10.1111/J.1744-7410.2002.Tb00128.X  1
2002 Goffredi SK, Barry JP. Energy acquisition and allocation in vesicomyid symbioses Cahiers De Biologie Marine. 43: 345-350.  1
2001 Van Dover CL, Humphris SE, Fornari D, Cavanaugh CM, Collier R, Goffredi SK, Hashimoto J, Lilley MD, Reysenbach AL, Shank TM, Von Damm KL, Banta A, Gallant RM, Gotz D, Green D, et al. Biogeography and ecological setting of Indian Ocean hydrothermal vents. Science (New York, N.Y.). 294: 818-23. PMID 11557843 DOI: 10.1126/Science.1064574  1
2001 Pasteris JD, Freeman JJ, Goffredi SK, Buck KR. Raman spectroscopic and laser scanning confocal microscopic analysis of sulfur in living sulfur-precipitating marine bacteria Chemical Geology. 180: 3-18. DOI: 10.1016/S0009-2541(01)00302-3  1
2001 Goffredi SK, Childress JJ. Activity and inhibitor sensitivity of ATPases in the hydrothermal vent tubeworm Riftia pachyptila: A comparative approach Marine Biology. 138: 259-265. DOI: 10.1007/S002270000462  1
1999 Goffredi SK, Childress JJ, Lallier FH, Desaulniers NT. The ionic composition of the hydrothermal vent tube worm Riftia pachyptila: evidence for the elimination of SO2-4SO and H+ and for a Cl-/HCO-3HCO shift. Physiological and Biochemical Zoology : Pbz. 72: 296-306. PMID 10222324 DOI: 10.1086/316664  1
1999 Goffredi SK, Girguis PR, Childress JJ, Desaulniers NT. Physiological functioning of carbonic anhydrase in the hydrothermal vent tubeworm Riftia pachyptila Biological Bulletin. 196: 257-264.  1
1998 Goffredi SK, Childress JJ, Lallier FH, Desaulniers NT. How to be the perfect host: CO2 and HS- accumulation and H+ elimination in the hydrothermal vent tube-worm Riftia pachyptila Cahiers De Biologie Marine. 39: 297-300.  1
1997 Goffredi SK, Childress JJ, Desaulniers NT, Lallier FJ. Sulfide acquisition by the vent worm Riftia pachyptila appears to be via uptake of HS-, rather than H2S. The Journal of Experimental Biology. 200: 2609-16. PMID 9359367  1
1997 Goffredi SK, Childress JJ, Desaulniers NT, Lee RW, Lallier FH, Hammond D. Inorganic carbon acquisition by the hydrothermal vent tubeworm Riftia pachyptila depends upon high external P(CO2) and upon proton-equivalent ion transport by the worm Journal of Experimental Biology. 200: 883-896.  1
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