Nathan Ellis - Publications

Affiliations: 
University of Chicago, Chicago, IL 
Area:
Molecular Biology, Genetics, Cell Biology

52 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 de Renty C, Pond KW, Yagle MK, Ellis NA. BLM Sumoylation Is Required for Replication Stability and Normal Fork Velocity During DNA Replication. Frontiers in Molecular Biosciences. 9: 875102. PMID 35847987 DOI: 10.3389/fmolb.2022.875102  0.377
2021 Ellis N, Zhu J, Yagle MK, Yang WC, Huang J, Kwako A, Seidman MM, Matunis MJ. RNF4 Regulates the BLM Helicase in Recovery From Replication Fork Collapse. Frontiers in Genetics. 12: 753535. PMID 34868226 DOI: 10.3389/fgene.2021.753535  0.497
2020 Xicola R, Manojlovic Z, Augustus G, Kupfer S, Emmadi R, Alagiozian-Angelova V, Triche T, Bodour S, Carpten J, Llor X, Ellis N. Abstract IA26: Mechanistic differences in early-onset colorectal cancer Cancer Epidemiology, Biomarkers & Prevention. DOI: 10.1158/1538-7755.Disp18-Ia26  0.312
2019 Taylor AMR, Rothblum-Oviatt C, Ellis NA, Hickson ID, Meyer S, Crawford TO, Smogorzewska A, Pietrucha B, Weemaes C, Stewart GS. Chromosome instability syndromes. Nature Reviews. Disease Primers. 5: 64. PMID 31537806 DOI: 10.1038/s41572-019-0113-0  0.487
2019 Pond KW, Ellis NA. Quantification of Double-Strand Breaks in Mammalian Cells Using Pulsed-Field Gel Electrophoresis. Methods in Molecular Biology (Clifton, N.J.). 1999: 75-85. PMID 31127570 DOI: 10.1007/978-1-4939-9500-4_4  0.397
2019 Pond KW, de Renty C, Yagle MK, Ellis NA. Rescue of collapsed replication forks is dependent on NSMCE2 to prevent mitotic DNA damage. Plos Genetics. 15: e1007942. PMID 30735491 DOI: 10.1371/journal.pgen.1007942  0.476
2018 Saylor J, Weterings E, Ellis N, Hinton J, Roberts E, Cress A, Knudsen B. Abstract B095: An automated tissue staining and quantitative digital image analysis pipeline for quantification of DNA damage repair at the single-cell level Cancer Research. 78. DOI: 10.1158/1538-7445.Prca2017-B095  0.481
2018 Pond KW, DeRenty C, Yagle MK, Ellis N. Abstract 1356: NSMCE2 enables rescue of collapsed replication forks to prevent mitotic DNA damage Cancer Research. 78: 1356-1356. DOI: 10.1158/1538-7445.Am2018-1356  0.651
2017 Yazici C, Wolf PG, Kim H, Cross TL, Vermillion K, Carroll T, Augustus GJ, Mutlu E, Tussing-Humphreys L, Braunschweig C, Xicola RM, Jung B, Llor X, Ellis NA, Gaskins HR. Race-dependent association of sulfidogenic bacteria with colorectal cancer. Gut. PMID 28153960 DOI: 10.1136/Gutjnl-2016-313321  0.319
2017 Pond KW, DeRenty C, Yagle M, Ellis N. Abstract A06: Regulation of homologous recombination by the SUMO ligase NSMCE2 Molecular Cancer Research. 15. DOI: 10.1158/1557-3125.Dnarepair16-A06  0.63
2016 Renty C, Ellis NA. Bloom's Syndrome: Why Not Premature Aging?: A comparison of the BLM and WRN helicases. Ageing Research Reviews. PMID 27238185 DOI: 10.1016/j.arr.2016.05.010  0.456
2016 Markowitz SD, Nock NL, Schmit SL, Stadler ZK, Joseph V, Zhang L, Willis JE, Scacheri P, Veigl M, Adams MD, Raskin L, Sullivan JF, Stratton K, Shia J, Ellis N, et al. A Germline Variant on Chromosome 4q31.1 Associates with Susceptibility to Developing Colon Cancer Metastasis. Plos One. 11: e0146435. PMID 26751797 DOI: 10.1371/Journal.Pone.0146435  0.343
2016 Ashktorab H, Ahuja S, Kannan L, Llor X, Ellis N, Xicola RM, Laiyemo AO, Carethers JM, Brim H, Nouraie M. Abstract 5013: A meta-analysis of MSI frequency and race in colorectal cancer Cancer Research. 76: 5013-5013. DOI: 10.1158/1538-7445.Am2016-5013  0.319
2016 Xicola RM, Clark JR, Carroll T, Alvikas J, Marwaha P, Regan M, Emmadi R, Alagiozian-Angelova VM, Kupfer S, Ellis NA, Llor X. 775 Unveiling New Colorectal Cancer Phenotypes With Mismatch Repair Deficiency Gastroenterology. 150: S160. DOI: 10.1016/S0016-5085(16)30630-8  0.326
2015 Grimm WA, Messer JS, Murphy SF, Nero T, Lodolce JP, Weber CR, Logsdon MF, Bartulis S, Sylvester BE, Springer A, Dougherty U, Niewold TB, Kupfer SS, Ellis N, Huo D, et al. The Thr300Ala variant in ATG16L1 is associated with improved survival in human colorectal cancer and enhanced production of type I interferon. Gut. PMID 25645662 DOI: 10.1136/Gutjnl-2014-308735  0.359
2015 Xicola R, Kupfer S, Braunschweig C, Ellis N, Llor X. Abstract A75: Excess of proximal microsatellite-stable colorectal cancer in African Americans from a multiethnic study Cancer Epidemiology, Biomarkers & Prevention. 24. DOI: 10.1158/1538-7755.Disp14-A75  0.346
2014 Pibiri F, Rechenmacher R, Xicola R, Kittles R, Sandler R, Keku T, Llor X, Carpten J, Kupfer S, Ellis N. Abstract 2191: Identification of functional risk alleles in colorectal cancer-associated regions in African Americans Cancer Research. 74: 2191-2191. DOI: 10.1158/1538-7445.Am2014-2191  0.375
2014 Marwaha P, Xicola RM, Kim YC, Snyder CL, Carroll T, Syngal S, Buxbaum S, Zhang MQ, Want SM, Lynch HT, Bessa X, Andreu M, Jover R, Carracedo A, Castells A, ... ... Ellis NA, et al. 675 Unveiling of DNA Repair Gene Alterations in Non-Lynch Hereditary Colorectal Cancer Through Exome Sequencing Gastroenterology. 146: S-119. DOI: 10.1016/S0016-5085(14)60429-7  0.419
2013 Ouyang KJ, Yagle MK, Matunis MJ, Ellis NA. BLM SUMOylation regulates ssDNA accumulation at stalled replication forks. Frontiers in Genetics. 4: 167. PMID 24027577 DOI: 10.3389/Fgene.2013.00167  0.754
2013 Parepally M, Rajaram P, Xicola R, Ellis N, Llor X, Venepalli N. Racial Differences in Colorectal Cancer: A Large Single Institution Experience American Journal of Gastroenterology. 108: S180. DOI: 10.14309/00000434-201310001-00613  0.326
2013 Xicola RMM, Doyle B, Rawson J, Garre P, Abuli A, Lee E, Murugappan S, Bessa X, Bujanda L, Balaguer F, Castellvi-Bel S, Clofent J, Alenda C, Jover R, Ruiz-Ponte C, ... ... Ellis N, et al. Abstract 1334: Implication of the 3′UTR region of TGFβR1 with MSS HNPCC and sporadic colorectal cancer. Cancer Research. 73: 1334-1334. DOI: 10.1158/1538-7445.Am2013-1334  0.357
2013 Pibiri F, Ellis N, Kittles R, LLor X, Xicola R, Kupfer S, Sandler RS, Keku T. Abstract 1330: Genetic variation in the vitamin D pathway and risk for colorectal cancer in African Americans. Cancer Research. 73: 1330-1330. DOI: 10.1158/1538-7445.Am2013-1330  0.316
2012 Ellis NA, Offit K. Heterozygous mutations in DNA repair genes and hereditary breast cancer: a question of power. Plos Genetics. 8: e1003008. PMID 23028381 DOI: 10.1371/journal.pgen.1003008  0.339
2012 Xicola RM, Gagnon M, Shaw J, Rodriguez G, Pusatcioglu C, Clark J, James R, Ravella S, Guzman G, Janoski A, Morrissey M, Mraz K, Cerye K, Chaudhry V, Kupfer S, ... ... Ellis N, et al. Abstract 3597: The Chicago Colorectal Cancer Consortium (CCCC) experience: Understanding colorectal cancer disparities Cancer Research. 72: 3597-3597. DOI: 10.1158/1538-7445.Am2012-3597  0.362
2011 Xicola RM, Gagnon M, Ravella S, Douglas G, Rawson JB, Adam G, Brock J, Lidiane G, Cerye K, Bhattacharya T, Patel R, Chaudhry S, Shaw J, Guzman G, Chaudhry V, ... ... Ellis N, et al. Abstract B73: The Chicago Colorectal Cancer Consortium (CCCC), a step forward in understanding colorectal cancer in African Americans Cancer Epidemiology, Biomarkers & Prevention. 20. DOI: 10.1158/1055-9965.Disp-11-B73  0.4
2010 Theodoratou E, Campbell H, Tenesa A, Houlston R, Webb E, Lubbe S, Broderick P, Gallinger S, Croitoru EM, Jenkins MA, Win AK, Cleary SP, Koessler T, Pharoah PD, Küry S, ... ... Ellis NA, et al. A large-scale meta-analysis to refine colorectal cancer risk estimates associated with MUTYH variants. British Journal of Cancer. 103: 1875-84. PMID 21063410 DOI: 10.1038/sj.bjc.6605966  0.31
2010 Tuupanen S, Yan J, Turunen M, Gylfe A, Li L, Eng C, Culver D, Kalady M, Chapelle Adl, Askhtorab H, Smooth D, Sandler R, Keku T, Ellis N, Kupfer S, et al. Abstract 4731: Resequencing of the MYC-335 enhancer in the colorectal cancer associated 8q24 region Cancer Research. 70: 4731-4731. DOI: 10.1158/1538-7445.Am10-4731  0.359
2009 Ouyang KJ, Woo LL, Zhu J, Huo D, Matunis MJ, Ellis NA. SUMO modification regulates BLM and RAD51 interaction at damaged replication forks. Plos Biology. 7: e1000252. PMID 19956565 DOI: 10.1371/Journal.Pbio.1000252  0.652
2009 Ellis NA, Sander M, Harris CC, Bohr VA. Bloom's syndrome workshop focuses on the functional specificities of RecQ helicases. Mechanisms of Ageing and Development. 129: 681-91. PMID 19238688 DOI: 10.1016/j.mad.2008.09.005  0.459
2008 Ouyang KJ, Woo LL, Ellis NA. Homologous recombination and maintenance of genome integrity: cancer and aging through the prism of human RecQ helicases. Mechanisms of Ageing and Development. 129: 425-40. PMID 18430459 DOI: 10.1016/J.Mad.2008.03.003  0.656
2007 Woo LL, Onel K, Ellis NA. The broken genome: genetic and pharmacologic approaches to breaking DNA. Annals of Medicine. 39: 208-18. PMID 17457718 DOI: 10.1080/08035250601167136  0.746
2006 Chen S, Wang W, Lee S, Nafa K, Lee J, Romans K, Watson P, Gruber SB, Euhus D, Kinzler KW, Jass J, Gallinger S, Lindor NM, Casey G, Ellis N, et al. Prediction of germline mutations and cancer risk in the Lynch syndrome. Jama. 296: 1479-87. PMID 17003396 DOI: 10.1001/Jama.296.12.1479  0.361
2005 Bian Y, Caldes T, Wijnen J, Franken P, Vasen H, Kaklamani V, Nafa K, Peterlongo P, Ellis N, Baron JA, Burn J, Moeslein G, Morrison PJ, Chen Y, Ahsan H, et al. TGFBR1*6A may contribute to hereditary colorectal cancer. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 23: 3074-8. PMID 15860866 DOI: 10.1200/Jco.2005.00.281  0.366
2005 Eladad S, Ye TZ, Hu P, Leversha M, Beresten S, Matunis MJ, Ellis NA. Intra-nuclear trafficking of the BLM helicase to DNA damage-induced foci is regulated by SUMO modification. Human Molecular Genetics. 14: 1351-65. PMID 15829507 DOI: 10.1093/hmg/ddi145  0.474
2004 Siddiqui R, Robles Diaz L, Nafa K, Kauff N, Facio F, Huang H, Onel K, Robson M, Ellis N, Offit K. TP53 and CHEK2 *1100delC gene mutation in North American families suggestive Li-Fraumeni syndrome: Memorial Sloan-Kettering experience. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 22: 9537. PMID 28016821 DOI: 10.1200/Jco.2004.22.14_Suppl.9537  0.339
2003 Sengupta S, Linke SP, Pedeux R, Yang Q, Farnsworth J, Garfield SH, Valerie K, Shay JW, Ellis NA, Wasylyk B, Harris CC. BLM helicase-dependent transport of p53 to sites of stalled DNA replication forks modulates homologous recombination. The Embo Journal. 22: 1210-22. PMID 12606585 DOI: 10.1093/Emboj/Cdg114  0.396
2003 Bushey M, Zauber A, Winawer S, Ellis N, Glogowski E, Finch R, Church T, Bond J, Mandelson M, Feld A, Mills G, Jordan P. Practicum in assessing family history of cancer to inform colorectal cancer screening Gastroenterology. 124: A647. DOI: 10.1016/S0016-5085(03)83277-8  0.313
2002 Teruya-Feldstein J, Greene J, Cohen L, Popplewell L, Ellis NA, Offit K. Analysis of mismatch repair defects in the familial occurrence of lymphoma and colorectal cancer. Leukemia & Lymphoma. 43: 1619-26. PMID 12400605 DOI: 10.1080/1042819021000002956  0.305
2002 Beamish H, Kedar P, Kaneko H, Chen P, Fukao T, Peng C, Beresten S, Gueven N, Purdie D, Lees-Miller S, Ellis N, Kondo N, Lavin MF. Functional link between BLM defective in Bloom's syndrome and the ataxia-telangiectasia-mutated protein, ATM Journal of Biological Chemistry. 277: 30515-30523. PMID 12034743 DOI: 10.1074/Jbc.M203801200  0.445
2002 Stark JM, Hu P, Pierce AJ, Moynahan ME, Ellis N, Jasin M. ATP hydrolysis by mammalian RAD51 has a key role during homology-directed DNA repair. The Journal of Biological Chemistry. 277: 20185-94. PMID 11923292 DOI: 10.1074/jbc.M112132200  0.493
2001 Hu P, Beresten SF, van Brabant AJ, Ye TZ, Pandolfi PP, Johnson FB, Guarente L, Ellis NA. Evidence for BLM and Topoisomerase IIIalpha interaction in genomic stability. Human Molecular Genetics. 10: 1287-98. PMID 11406610 DOI: 10.1093/Hmg/10.12.1287  0.357
2001 Wang XW, Tseng A, Ellis NA, Spillare EA, Linke SP, Robles AI, Seker H, Yang Q, Hu P, Beresten S, Bemmels NA, Garfield S, Harris CC. Functional interaction of p53 and BLM DNA helicase in apoptosis. The Journal of Biological Chemistry. 276: 32948-55. PMID 11399766 DOI: 10.1074/jbc.M103298200  0.306
2001 Bischof O, Kim SH, Irving J, Beresten S, Ellis NA, Campisi J. Regulation and localization of the Bloom syndrome protein in response to DNA damage. The Journal of Cell Biology. 153: 367-80. PMID 11309417 DOI: 10.1083/JCB.153.2.367  0.508
2001 Sanz MM, Proytcheva M, Ellis NA, Holloman WK, German J. BLM, the Bloom's syndrome protein, varies during the cell cycle in its amount, distribution, and co-localization with other nuclear proteins. Cytogenetics and Cell Genetics. 91: 217-23. PMID 11173860 DOI: 10.1159/000056848  0.316
2000 van Brabant AJ, Stan R, Ellis NA. DNA helicases, genomic instability, and human genetic disease. Annual Review of Genomics and Human Genetics. 1: 409-59. PMID 11701636 DOI: 10.1146/annurev.genom.1.1.409  0.523
2000 van Brabant AJ, Ye T, Sanz M, German III JL, Ellis NA, Holloman WK. Binding and melting of D-loops by the Bloom syndrome helicase. Biochemistry. 39: 14617-25. PMID 11087418 DOI: 10.1021/Bi0018640  0.467
2000 Kawabe T, Tsuyama N, Kitao S, Nishikawa K, Shimamoto A, Shiratori M, Matsumoto T, Anno K, Sato T, Mitsui Y, Seki M, Enomoto T, Goto M, Ellis NA, Ide T, et al. Differential regulation of human RecQ family helicases in cell transformation and cell cycle Oncogene. 19: 4764-4772. PMID 11032027 DOI: 10.1038/Sj.Onc.1203841  0.301
2000 Huang S, Beresten S, Li B, Oshima J, Ellis NA, Campisi J. Characterization of the human and mouse WRN 3'-->5' exonuclease. Nucleic Acids Research. 28: 2396-405. PMID 10871373 DOI: 10.1093/NAR/28.12.2396  0.486
1999 Zhong S, Hu P, Ye TZ, Stan R, Ellis NA, Pandolfi PP. A role for PML and the nuclear body in genomic stability. Oncogene. 18: 7941-7. PMID 10637504 DOI: 10.1038/Sj.Onc.1203367  0.36
1999 Neff NF, Ellis NA, Ye TZ, Noonan J, Huang K, Sanz M, Proytcheva M. The DNA helicase activity of BLM is necessary for the correction of the genomic instability of bloom syndrome cells. Molecular Biology of the Cell. 10: 665-76. PMID 10069810 DOI: 10.1091/Mbc.10.3.665  0.434
1997 Ellis NA. DNA helicases in inherited human disorders. Current Opinion in Genetics & Development. 7: 354-63. PMID 9229111 DOI: 10.1016/S0959-437X(97)80149-9  0.307
1997 Ellis NA, German J. Molecular genetics of Bloom's syndrome. Human Molecular Genetics. 1457-63. PMID 8875252 DOI: 10.1093/hmg/5.Supplement_1.1457  0.328
Show low-probability matches.