| Year |
Citation |
Score |
| 2020 |
Li W, Schäfer A, Kulkarni SS, Liu X, Martinez DR, Chen C, Sun Z, Leist SR, Drelich A, Zhang L, Ura ML, Berezuk A, Chittori S, Leopold K, Mannar D, ... ... Subramaniam S, et al. High Potency of a Bivalent Human V Domain in SARS-CoV-2 Animal Models. Cell. PMID 32941803 DOI: 10.1016/J.Cell.2020.09.007 |
0.302 |
|
| 2020 |
Merk A, Fukumura T, Zhu X, Darling JE, Grisshammer R, Ognjenovic J, Subramaniam S. 1.8 Å resolution structure of β-galactosidase with a 200 kV CRYO ARM electron microscope. Iucrj. 7: 639-643. PMID 32695410 DOI: 10.1107/S2052252520006855 |
0.342 |
|
| 2020 |
Lin M, Grandinetti G, Hartnell LM, Bliss D, Subramaniam S, Rikihisa Y. Host membrane lipids are trafficked to membranes of intravacuolar bacterium . Proceedings of the National Academy of Sciences of the United States of America. PMID 32193339 DOI: 10.1073/Pnas.1921619117 |
0.304 |
|
| 2019 |
Sherekar M, Han SW, Ghirlando R, Messing S, Drew M, Rabara D, Waybright T, Juneja P, O'Neill H, Stanley CB, Bhowmik D, Ramanathan A, Subramaniam S, Nissley DV, Gillette W, et al. Biochemical and structural analyses reveal that the tumor suppressor neurofibromin (NF1) forms a high-affinity dimer. The Journal of Biological Chemistry. PMID 31836666 DOI: 10.1074/Jbc.Ra119.010934 |
0.33 |
|
| 2019 |
Chittori S, Hong J, Bai Y, Subramaniam S. Structure of the primed state of the ATPase domain of chromatin remodeling factor ISWI bound to the nucleosome. Nucleic Acids Research. PMID 31402386 DOI: 10.1093/Nar/Gkz670 |
0.304 |
|
| 2019 |
Caffrey B, Maltsev AV, Gonzalez-Freire M, Hartnell LM, Ferrucci L, Subramaniam S. Semi-Automated 3D Segmentation of Human Skeletal Muscle Using Focused Ion Beam-Scanning Electron Microscopic Images. Journal of Structural Biology. PMID 30914296 DOI: 10.1016/J.Jsb.2019.03.008 |
0.312 |
|
| 2019 |
Ognjenović J, Grisshammer R, Subramaniam S. Frontiers in Cryo Electron Microscopy of Complex Macromolecular Assemblies. Annual Review of Biomedical Engineering. PMID 30892930 DOI: 10.1146/Annurev-Bioeng-060418-052453 |
0.391 |
|
| 2018 |
Matthies D, Bae C, Toombes GE, Fox T, Bartesaghi A, Subramaniam S, Swartz KJ. Single-particle cryo-EM structure of a voltage-activated potassium channel in lipid nanodiscs. Elife. 7. PMID 30109985 DOI: 10.7554/Elife.37558 |
0.312 |
|
| 2018 |
Bartesaghi A, Aguerrebere C, Falconieri V, Banerjee S, Earl LA, Zhu X, Grigorieff N, Milne JLS, Sapiro G, Wu X, Subramaniam S. Atomic Resolution Cryo-EM Structure of β-Galactosidase. Structure (London, England : 1993). PMID 29754826 DOI: 10.1016/J.Str.2018.04.004 |
0.345 |
|
| 2018 |
Earl LA, Falconieri V, Subramaniam S. Microbiology catches the cryo-EM bug. Current Opinion in Microbiology. 43: 199-207. PMID 29656089 DOI: 10.1016/J.Mib.2018.02.012 |
0.362 |
|
| 2017 |
Patwardhan A, Brandt R, Butcher SJ, Collinson L, Gault D, Grünewald K, Hecksel C, Huiskonen JT, Iudin A, Jones ML, Korir PK, Koster AJ, Lagerstedt I, Lawson CL, Mastronarde D, ... ... Subramaniam S, et al. Building bridges between cellular and molecular structural biology. Elife. 6. PMID 28682240 DOI: 10.7554/Elife.25835 |
0.307 |
|
| 2017 |
Earl LA, Falconieri V, Milne JL, Subramaniam S. Cryo-EM: beyond the microscope. Current Opinion in Structural Biology. 46: 71-78. PMID 28646653 DOI: 10.1016/J.Sbi.2017.06.002 |
0.358 |
|
| 2017 |
Chittori S, Meyerson JR, Merk A, Rao P, Han TH, Serpe M, Mayer ML, Subramaniam S. Cryo-Electron Microscopy Reveals Structural Basis of Kainate Subtype Glutamate Receptor Desensitization Biophysical Journal. 112: 419a. DOI: 10.1016/J.Bpj.2016.11.2241 |
0.33 |
|
| 2016 |
Subramaniam S, Earl LA, Falconieri V, Milne JL, Egelman EH. Resolution advances in cryo-EM enable application to drug discovery. Current Opinion in Structural Biology. 41: 194-202. PMID 27552081 DOI: 10.1016/J.Sbi.2016.07.009 |
0.368 |
|
| 2016 |
Earl LA, Subramaniam S. Cryo-EM of viruses and vaccine design. Proceedings of the National Academy of Sciences of the United States of America. PMID 27482113 DOI: 10.1073/Pnas.1609721113 |
0.36 |
|
| 2016 |
Tran EE, Nelson EA, Bonagiri P, Simmons JA, Shoemaker CJ, Schmaljohn CS, Kobinger GP, Zeitlin L, Subramaniam S, White JM. Mapping of Ebolavirus Neutralization by Monoclonal Antibodies in the ZMapp Cocktail Using Cryo-Electron Tomography and Studies of Cellular Entry. Journal of Virology. PMID 27279622 DOI: 10.1128/Jvi.00406-16 |
0.326 |
|
| 2016 |
Merk A, Bartesaghi A, Banerjee S, Falconieri V, Rao P, Davis MI, Pragani R, Boxer MB, Earl LA, Milne JL, Subramaniam S. Breaking Cryo-EM Resolution Barriers to Facilitate Drug Discovery. Cell. PMID 27238019 DOI: 10.1016/J.Cell.2016.05.040 |
0.352 |
|
| 2016 |
Borgnia MJ, Banerjee S, Merk A, Matthies D, Bartesaghi A, Rao P, Pierson J, Earl LA, Falconieri V, Subramaniam S, Milne JL. Using cryo-EM to map small ligands on dynamic metabolic enzymes: Studies with glutamate dehydrogenase. Molecular Pharmacology. PMID 27036132 DOI: 10.1124/Mol.116.103382 |
0.323 |
|
| 2016 |
Banerjee S, Bartesaghi A, Merk A, Rao P, Bulfer SL, Yan Y, Green N, Mroczkowski B, Neitz RJ, Wipf P, Falconieri V, Deshaies RJ, Milne JL, Huryn D, Arkin M, ... Subramaniam S, et al. 2.3 Å resolution cryo-EM structure of human p97 and mechanism of allosteric inhibition. Science (New York, N.Y.). PMID 26822609 DOI: 10.1126/Science.Aad7974 |
0.325 |
|
| 2016 |
Borgnia MJ, Banerjee S, Bartesaghi A, Matthies D, Rao P, Merk A, Pierson J, Milne JL, Subramaniam S. Using cryo-EM to Untangle the Conformational Landscape of a Small Allosterically-Regulated Complex Biophysical Journal. 110: 22a. DOI: 10.1016/J.Bpj.2015.11.179 |
0.356 |
|
| 2016 |
Matthies D, Dalmas O, Borgnia MJ, Dominik PK, Merk A, Rao P, Reddy BG, Islam S, Bartesaghi A, Perozo E, Subramaniam S. Single-Particle Cryo-EM Studies of a 200-kDa Magnesium Ion Channel Reveal Large Structural Changes Upon Gating Biophysical Journal. 110: 10a. DOI: 10.1016/J.Bpj.2015.11.109 |
0.305 |
|
| 2015 |
Sun L, Zhang X, Gao S, Rao PA, Padilla-Sanchez V, Chen Z, Sun S, Xiang Y, Subramaniam S, Rao VB, Rossmann MG. Cryo-EM structure of the bacteriophage T4 portal protein assembly at near-atomic resolution. Nature Communications. 6: 7548. PMID 26144253 DOI: 10.1038/Ncomms8548 |
0.328 |
|
| 2015 |
Bartesaghi A, Merk A, Banerjee S, Matthies D, Wu X, Milne JL, Subramaniam S. 2.2 Å resolution cryo-EM structure of β-galactosidase in complex with a cell-permeant inhibitor. Science (New York, N.Y.). 348: 1147-51. PMID 25953817 DOI: 10.1126/Science.Aab1576 |
0.357 |
|
| 2015 |
Frank GA, Narayan K, Bess JW, Del Prete GQ, Wu X, Moran A, Hartnell LM, Earl LA, Lifson JD, Subramaniam S. Maturation of the HIV-1 core by a non-diffusional phase transition. Nature Communications. 6: 5854. PMID 25569620 DOI: 10.1038/Ncomms6854 |
0.312 |
|
| 2015 |
Subramaniam S, Radhakrishnan A, Chakravarthi S, Palanisamy UD, Haleagrahara N. Antihyperglycemic effects of Nephelium lappaceum rind extract in high fat-induced diabetic rats International Journal of Pharmacology. 11: 542-551. DOI: 10.3923/ijp.2015.542.551 |
0.373 |
|
| 2015 |
Frank GA, Narayan K, Bess JW, Del Prete GQ, Wu X, Moran A, Hartnell L, Earl LA, Lifson JD, Subramaniam S. Paradigm Shift in the Mechanism of HIV-1 Core Biogenesis Biophysical Journal. 108: 527a. DOI: 10.1016/J.Bpj.2014.11.2888 |
0.331 |
|
| 2015 |
Borgnia MJ, Banerjee S, Rao P, Bartesaghi A, Merk A, Pierson J, Subramaniam S, Milne J. Localization of Small Ligands in a Metabolic Protein Complex using Cryo-Electron Microscopy Biophysical Journal. 108: 514a. DOI: 10.1016/J.Bpj.2014.11.2818 |
0.345 |
|
| 2015 |
Matthies D, Bartesaghi A, Merk A, Banerjee S, Subramaniam S. Residue Specific Radiation Damage of Protein Structures using High-Resolution Cryo-Electron Microscopy Biophysical Journal. 108: 190a. DOI: 10.1016/J.Bpj.2014.11.1052 |
0.358 |
|
| 2014 |
Risco C, de Castro IF, Sanz-Sánchez L, Narayan K, Grandinetti G, Subramaniam S. Three-Dimensional Imaging of Viral Infections. Annual Review of Virology. 1: 453-73. PMID 26958730 DOI: 10.1146/Annurev-Virology-031413-085351 |
0.356 |
|
| 2014 |
Meyerson JR, Rao P, Kumar J, Chittori S, Banerjee S, Pierson J, Mayer ML, Subramaniam S. Self-assembled monolayers improve protein distribution on holey carbon cryo-EM supports. Scientific Reports. 4: 7084. PMID 25403871 DOI: 10.1038/Srep07084 |
0.306 |
|
| 2014 |
Patwardhan A, Ashton A, Brandt R, Butcher S, Carzaniga R, Chiu W, Collinson L, Doux P, Duke E, Ellisman MH, Franken E, Grünewald K, Heriche JK, Koster A, Kühlbrandt W, ... ... Subramaniam S, et al. A 3D cellular context for the macromolecular world. Nature Structural & Molecular Biology. 21: 841-5. PMID 25289590 DOI: 10.1038/Nsmb.2897 |
0.31 |
|
| 2014 |
Meyerson JR, Kumar J, Chittori S, Rao P, Pierson J, Bartesaghi A, Mayer ML, Subramaniam S. Structural mechanism of glutamate receptor activation and desensitization. Nature. 514: 328-34. PMID 25119039 DOI: 10.1038/Nature13603 |
0.311 |
|
| 2014 |
Bartesaghi A, Matthies D, Banerjee S, Merk A, Subramaniam S. Structure of β-galactosidase at 3.2-Å resolution obtained by cryo-electron microscopy. Proceedings of the National Academy of Sciences of the United States of America. 111: 11709-14. PMID 25071206 DOI: 10.1073/Pnas.1402809111 |
0.344 |
|
| 2014 |
Tran EE, Simmons JA, Bartesaghi A, Shoemaker CJ, Nelson E, White JM, Subramaniam S. Spatial localization of the Ebola virus glycoprotein mucin-like domain determined by cryo-electron tomography. Journal of Virology. 88: 10958-62. PMID 25008940 DOI: 10.1128/Jvi.00870-14 |
0.334 |
|
| 2014 |
Do T, Murphy G, Earl LA, Del Prete GQ, Grandinetti G, Li GH, Estes JD, Rao P, Trubey CM, Thomas J, Spector J, Bliss D, Nath A, Lifson JD, Subramaniam S. Three-dimensional imaging of HIV-1 virological synapses reveals membrane architectures involved in virus transmission. Journal of Virology. 88: 10327-39. PMID 24965444 DOI: 10.1128/Jvi.00788-14 |
0.342 |
|
| 2014 |
Narayan K, Danielson CM, Lagarec K, Lowekamp BC, Coffman P, Laquerre A, Phaneuf MW, Hope TJ, Subramaniam S. Multi-resolution correlative focused ion beam scanning electron microscopy: applications to cell biology. Journal of Structural Biology. 185: 278-84. PMID 24300554 DOI: 10.1016/J.Jsb.2013.11.008 |
0.361 |
|
| 2014 |
Bartesaghi A, Pierson J, Rao P, Banerjee S, Borgnia M, Yu L, Earl L, Alink M, Milne J, Subramaniam S. Structure Determination of Small Macromolecular Complexes by Cryo-Electron Microscopy Biophysical Journal. 106: 601a. DOI: 10.1016/J.Bpj.2013.11.3329 |
0.379 |
|
| 2014 |
Agard D, Cheng Y, Glaeser RM, Subramaniam S. Single-particle cryo-electron microscopy (cryo-EM): Progress, challenges, and perspectives for further improvement Advances in Imaging and Electron Physics. 185: 113-137. DOI: 10.1016/B978-0-12-800144-8.00002-1 |
0.317 |
|
| 2013 |
Gustchina E, Li M, Ghirlando R, Schuck P, Louis JM, Pierson J, Rao P, Subramaniam S, Gustchina A, Clore GM, Wlodawer A. Complexes of neutralizing and non-neutralizing affinity matured fabs with a mimetic of the internal trimeric coiled-coil of HIV-1 gp41 Plos One. 8. PMID 24244293 DOI: 10.1371/Journal.Pone.0078187 |
0.34 |
|
| 2013 |
Bartesaghi A, Merk A, Borgnia MJ, Milne JL, Subramaniam S. Prefusion structure of trimeric HIV-1 envelope glycoprotein determined by cryo-electron microscopy. Nature Structural & Molecular Biology. 20: 1352-7. PMID 24154805 DOI: 10.1038/Nsmb.2711 |
0.338 |
|
| 2013 |
Subramaniam S. Structure of trimeric HIV-1 envelope glycoproteins. Proceedings of the National Academy of Sciences of the United States of America. 110: E4172-4. PMID 24106302 DOI: 10.1073/Pnas.1313802110 |
0.323 |
|
| 2013 |
Earl LA, Lifson JD, Subramaniam S. Catching HIV 'in the act' with 3D electron microscopy. Trends in Microbiology. 21: 397-404. PMID 23850373 DOI: 10.1016/J.Tim.2013.06.004 |
0.306 |
|
| 2013 |
Merk A, Subramaniam S. HIV-1 envelope glycoprotein structure. Current Opinion in Structural Biology. 23: 268-76. PMID 23602427 DOI: 10.1016/J.Sbi.2013.03.007 |
0.319 |
|
| 2013 |
Harris AK, Bartesaghi A, Milne JL, Subramaniam S. HIV-1 envelope glycoprotein trimers display open quaternary conformation when bound to the gp41 membrane-proximal external-region-directed broadly neutralizing antibody Z13e1. Journal of Virology. 87: 7191-6. PMID 23596305 DOI: 10.1128/Jvi.03284-12 |
0.316 |
|
| 2013 |
Schauder DM, Kuybeda O, Zhang J, Klymko K, Bartesaghi A, Borgnia MJ, Mayer ML, Subramaniam S. Glutamate receptor desensitization is mediated by changes in quaternary structure of the ligand binding domain. Proceedings of the National Academy of Sciences of the United States of America. 110: 5921-6. PMID 23530186 DOI: 10.1016/J.Bpj.2012.11.1953 |
0.32 |
|
| 2013 |
Meyerson JR, Tran EE, Kuybeda O, Chen W, Dimitrov DS, Gorlani A, Verrips T, Lifson JD, Subramaniam S. Molecular structures of trimeric HIV-1 Env in complex with small antibody derivatives. Proceedings of the National Academy of Sciences of the United States of America. 110: 513-8. PMID 23267106 DOI: 10.1073/Pnas.1214810110 |
0.309 |
|
| 2013 |
Milne JL, Borgnia MJ, Bartesaghi A, Tran EE, Earl LA, Schauder DM, Lengyel J, Pierson J, Patwardhan A, Subramaniam S. Cryo-electron microscopy--a primer for the non-microscopist. The Febs Journal. 280: 28-45. PMID 23181775 DOI: 10.1111/Febs.12078 |
0.382 |
|
| 2013 |
Kuybeda O, Frank GA, Bartesaghi A, Borgnia M, Subramaniam S, Sapiro G. A collaborative framework for 3D alignment and classification of heterogeneous subvolumes in cryo-electron tomography. Journal of Structural Biology. 181: 116-27. PMID 23110852 DOI: 10.1016/J.Jsb.2012.10.010 |
0.36 |
|
| 2013 |
Bartesaghi A, Pierson J, Schauder D, Borgnia M, Subramaniam S. Automated Workflows for Structure Determination by Single-Particle Cryo-EM at Sub-Nanometer Resolutions Biophysical Journal. 104. DOI: 10.1016/J.Bpj.2012.11.1955 |
0.317 |
|
| 2013 |
Tran EE, Kuybeda O, Bartesaghi A, Milne JL, Subramaniam S. Binding of Neutralizing Antibodies Results in Distinct Quaternary Conformations of Trimeric HIV-1 Envelope Glycoproteins Biophysical Journal. 104: 352a. DOI: 10.1016/J.Bpj.2012.11.1952 |
0.316 |
|
| 2013 |
Borgnia MJ, Bartesaghi A, Tran E, Milne JL, Subramaniam S. 9 Å Structure of Trimeric HIV-1 Envelope Glycoprotein in an Activated State Biophysical Journal. 104: 350a. DOI: 10.1016/J.Bpj.2012.11.1946 |
0.353 |
|
| 2012 |
Yoo TS, Bliss D, Lowekamp BC, Chen DT, Murphy GE, Narayan K, Hartnell LM, Do T, Subramaniam S. Visualizing cells and humans in 3D: biomedical image analysis at nanometer and meter scales. Ieee Computer Graphics and Applications. 32: 39-49. PMID 24806986 DOI: 10.1109/Mcg.2012.68 |
0.319 |
|
| 2012 |
Bartesaghi A, Lecumberry F, Sapiro G, Subramaniam S. Protein secondary structure determination by constrained single-particle cryo-electron tomography. Structure (London, England : 1993). 20: 2003-13. PMID 23217682 DOI: 10.1016/J.Str.2012.10.016 |
0.369 |
|
| 2012 |
Tran EE, Borgnia MJ, Kuybeda O, Schauder DM, Bartesaghi A, Frank GA, Sapiro G, Milne JL, Subramaniam S. Structural mechanism of trimeric HIV-1 envelope glycoprotein activation. Plos Pathogens. 8: e1002797. PMID 22807678 DOI: 10.1371/Journal.Ppat.1002797 |
0.345 |
|
| 2012 |
Frank GA, Bartesaghi A, Kuybeda O, Borgnia MJ, White TA, Sapiro G, Subramaniam S. Computational separation of conformational heterogeneity using cryo-electron tomography and 3D sub-volume averaging. Journal of Structural Biology. 178: 165-76. PMID 22248450 DOI: 10.1016/J.Jsb.2012.01.004 |
0.356 |
|
| 2011 |
Meyerson JR, White TA, Bliss D, Moran A, Bartesaghi A, Borgnia MJ, de la Cruz MJ, Schauder D, Hartnell LM, Nandwani R, Dawood M, Kim B, Kim JH, Sununu J, Yang L, ... ... Subramaniam S, et al. Determination of molecular structures of HIV envelope glycoproteins using cryo-electron tomography and automated sub-tomogram averaging. Journal of Visualized Experiments : Jove. PMID 22158337 DOI: 10.3791/2770 |
0.346 |
|
| 2011 |
White TA, Bartesaghi A, Borgnia MJ, de la Cruz MJ, Nandwani R, Hoxie JA, Bess JW, Lifson JD, Milne JL, Subramaniam S. Three-dimensional structures of soluble CD4-bound states of trimeric simian immunodeficiency virus envelope glycoproteins determined by using cryo-electron tomography. Journal of Virology. 85: 12114-23. PMID 21937655 DOI: 10.1128/Jvi.05297-11 |
0.331 |
|
| 2011 |
Murphy GE, Narayan K, Lowekamp BC, Hartnell LM, Heymann JA, Fu J, Subramaniam S. Correlative 3D imaging of whole mammalian cells with light and electron microscopy. Journal of Structural Biology. 176: 268-78. PMID 21907806 DOI: 10.1016/J.Jsb.2011.08.013 |
0.369 |
|
| 2011 |
Nikolic DS, Lehmann M, Felts R, Garcia E, Blanchet FP, Subramaniam S, Piguet V. HIV-1 activates Cdc42 and induces membrane extensions in immature dendritic cells to facilitate cell-to-cell virus propagation. Blood. 118: 4841-52. PMID 21562048 DOI: 10.1182/Blood-2010-09-305417 |
0.342 |
|
| 2011 |
Khursigara CM, Lan G, Neumann S, Wu X, Ravindran S, Borgnia MJ, Sourjik V, Milne J, Tu Y, Subramaniam S. Lateral density of receptor arrays in the membrane plane influences sensitivity of the E. coli chemotaxis response. The Embo Journal. 30: 1719-29. PMID 21441899 DOI: 10.1038/Emboj.2011.77 |
0.319 |
|
| 2011 |
Szakal C, Narayan K, Fu J, Lefman J, Subramaniam S. Compositional mapping of the surface and interior of mammalian cells at submicrometer resolution. Analytical Chemistry. 83: 1207-13. PMID 21268648 DOI: 10.1021/Ac1030607 |
0.326 |
|
| 2011 |
Butan C, Hartnell LM, Fenton AK, Bliss D, Sockett RE, Subramaniam S, Milne JL. Spiral architecture of the nucleoid in Bdellovibrio bacteriovorus. Journal of Bacteriology. 193: 1341-50. PMID 21148724 DOI: 10.1128/Jb.01061-10 |
0.337 |
|
| 2010 |
White TA, Bartesaghi A, Borgnia MJ, Meyerson JR, de la Cruz MJ, Bess JW, Nandwani R, Hoxie JA, Lifson JD, Milne JL, Subramaniam S. Molecular architectures of trimeric SIV and HIV-1 envelope glycoproteins on intact viruses: strain-dependent variation in quaternary structure. Plos Pathogens. 6: e1001249. PMID 21203482 DOI: 10.1371/Journal.Ppat.1001249 |
0.326 |
|
| 2010 |
Fenton AK, Hobley L, Butan C, Subramaniam S, Sockett RE. A coiled-coil-repeat protein 'Ccrp' in Bdellovibrio bacteriovorus prevents cellular indentation, but is not essential for vibroid cell morphology. Fems Microbiology Letters. 313: 89-95. PMID 20977494 DOI: 10.1111/J.1574-6968.2010.02125.X |
0.319 |
|
| 2010 |
Felts RL, Narayan K, Estes JD, Shi D, Trubey CM, Fu J, Hartnell LM, Ruthel GT, Schneider DK, Nagashima K, Bess JW, Bavari S, Lowekamp BC, Bliss D, Lifson JD, ... Subramaniam S, et al. 3D visualization of HIV transfer at the virological synapse between dendritic cells and T cells. Proceedings of the National Academy of Sciences of the United States of America. 107: 13336-41. PMID 20624966 DOI: 10.1073/Pnas.1003040107 |
0.312 |
|
| 2010 |
Murphy GE, Lowekamp BC, Zerfas PM, Chandler RJ, Narasimha R, Venditti CP, Subramaniam S. Ion-abrasion scanning electron microscopy reveals distorted liver mitochondrial morphology in murine methylmalonic acidemia. Journal of Structural Biology. 171: 125-32. PMID 20399866 DOI: 10.1016/J.Jsb.2010.04.005 |
0.34 |
|
| 2010 |
Subramaniam S. Cells and Viruses at Molecular Resolution: From Structure to Mechanism Microscopy and Microanalysis. 16: 846-847. DOI: 10.1017/S1431927610063245 |
0.329 |
|
| 2010 |
White T, Bartesaghi A, Borgnia M, de la Cruz M, Milne J, Subramaniam S. Structural Studies of Trimeric SIV and HIV-1 Envelope Glycoproteins Using Cryo-Electron Tomography Microscopy and Microanalysis. 16: 882-883. DOI: 10.1017/S1431927610061350 |
0.341 |
|
| 2010 |
Wu X, Zhang P, Khursigara CM, Subramaniam S, Brooks BR. Electron Tomography and Molecular Modeling Study of Chemoreceptor Organization Biophysical Journal. 98: 383a. DOI: 10.1016/J.Bpj.2009.12.2064 |
0.338 |
|
| 2009 |
Bennett AE, Narayan K, Shi D, Hartnell LM, Gousset K, He H, Lowekamp BC, Yoo TS, Bliss D, Freed EO, Subramaniam S. Ion-abrasion scanning electron microscopy reveals surface-connected tubular conduits in HIV-infected macrophages. Plos Pathogens. 5: e1000591. PMID 19779568 DOI: 10.1371/Journal.Ppat.1000591 |
0.358 |
|
| 2009 |
Milne JL, Subramaniam S. Cryo-electron tomography of bacteria: progress, challenges and future prospects. Nature Reviews. Microbiology. 7: 666-75. PMID 19668224 DOI: 10.1038/Nrmicro2183 |
0.367 |
|
| 2009 |
Bartesaghi A, Subramaniam S. Membrane protein structure determination using cryo-electron tomography and 3D image averaging. Current Opinion in Structural Biology. 19: 402-7. PMID 19646859 DOI: 10.1016/J.Sbi.2009.06.005 |
0.399 |
|
| 2009 |
Hirai T, Subramaniam S, Lanyi JK. Structural snapshots of conformational changes in a seven-helix membrane protein: lessons from bacteriorhodopsin. Current Opinion in Structural Biology. 19: 433-9. PMID 19643594 DOI: 10.1016/J.Sbi.2009.07.009 |
0.333 |
|
| 2009 |
Narayan K, Perkins EM, Murphy GE, Dalai SK, Edidin M, Subramaniam S, Sadegh-Nasseri S. Staphylococcal enterotoxin A induces small clusters of HLA-DR1 on B cells. Plos One. 4: e6188. PMID 19587800 DOI: 10.1371/Journal.Pone.0006188 |
0.72 |
|
| 2009 |
Hirai T, Subramaniam S. Protein conformational changes in the bacteriorhodopsin photocycle: comparison of findings from electron and X-ray crystallographic analyses. Plos One. 4: e5769. PMID 19488399 DOI: 10.1371/Journal.Pone.0005769 |
0.356 |
|
| 2009 |
Hildebrand M, Kim S, Shi D, Scott K, Subramaniam S. 3D imaging of diatoms with ion-abrasion scanning electron microscopy. Journal of Structural Biology. 166: 316-28. PMID 19269330 DOI: 10.1017/S1431927608088958 |
0.362 |
|
| 2009 |
Heymann JA, Shi D, Kim S, Bliss D, Milne JL, Subramaniam S. 3D imaging of mammalian cells with ion-abrasion scanning electron microscopy. Journal of Structural Biology. 166: 1-7. PMID 19116171 DOI: 10.1016/J.Jsb.2008.11.005 |
0.36 |
|
| 2009 |
Narasimha R, Ouyang H, Gray A, McLaughlin SW, Subramaniam S. Automatic joint classification and segmentation of whole cell 3D images Pattern Recognition. 42: 1067-1079. DOI: 10.1016/J.Patcog.2008.08.009 |
0.32 |
|
| 2008 |
Khursigara CM, Wu X, Zhang P, Lefman J, Subramaniam S. Role of HAMP domains in chemotaxis signaling by bacterial chemoreceptors. Proceedings of the National Academy of Sciences of the United States of America. 105: 16555-60. PMID 18940922 DOI: 10.1073/Pnas.0806401105 |
0.321 |
|
| 2008 |
Khursigara CM, Wu X, Subramaniam S. Chemoreceptors in Caulobacter crescentus: trimers of receptor dimers in a partially ordered hexagonally packed array. Journal of Bacteriology. 190: 6805-10. PMID 18689468 DOI: 10.1128/Jb.00640-08 |
0.313 |
|
| 2008 |
Liu J, Bartesaghi A, Borgnia MJ, Sapiro G, Subramaniam S. Molecular architecture of native HIV-1 gp120 trimers. Nature. 455: 109-13. PMID 18668044 DOI: 10.1038/Nature07159 |
0.349 |
|
| 2008 |
Bartesaghi A, Sprechmann P, Liu J, Randall G, Sapiro G, Subramaniam S. Classification and 3D averaging with missing wedge correction in biological electron tomography. Journal of Structural Biology. 162: 436-50. PMID 18440828 DOI: 10.1016/J.Jsb.2008.02.008 |
0.37 |
|
| 2008 |
Lengyel JS, Milne JL, Subramaniam S. Electron tomography in nanoparticle imaging and analysis. Nanomedicine (London, England). 3: 125-31. PMID 18393671 DOI: 10.2217/17435889.3.1.125 |
0.343 |
|
| 2008 |
Borgnia MJ, Subramaniam S, Milne JL. Three-dimensional imaging of the highly bent architecture of Bdellovibrio bacteriovorus by using cryo-electron tomography. Journal of Bacteriology. 190: 2588-96. PMID 18203829 DOI: 10.1128/Jb.01538-07 |
0.362 |
|
| 2007 |
Subramaniam S, Bartesaghi A, Liu J, Bennett AE, Sougrat R. Electron tomography of viruses. Current Opinion in Structural Biology. 17: 596-602. PMID 17964134 DOI: 10.1016/J.Sbi.2007.09.009 |
0.357 |
|
| 2007 |
Liu J, McBride MJ, Subramaniam S. Cell surface filaments of the gliding bacterium Flavobacterium johnsoniae revealed by cryo-electron tomography. Journal of Bacteriology. 189: 7503-6. PMID 17693495 DOI: 10.1128/Jb.00957-07 |
0.334 |
|
| 2007 |
Bennett A, Liu J, Van Ryk D, Bliss D, Arthos J, Henderson RM, Subramaniam S. Cryoelectron tomographic analysis of an HIV-neutralizing protein and its complex with native viral gp120. The Journal of Biological Chemistry. 282: 27754-9. PMID 17599917 DOI: 10.1074/Jbc.M702025200 |
0.316 |
|
| 2007 |
Sougrat R, Bartesaghi A, Lifson JD, Bennett AE, Bess JW, Zabransky DJ, Subramaniam S. Electron tomography of the contact between T cells and SIV/HIV-1: implications for viral entry. Plos Pathogens. 3: e63. PMID 17480119 DOI: 10.1371/Journal.Ppat.0030063 |
0.339 |
|
| 2007 |
Zhang P, Khursigara CM, Hartnell LM, Subramaniam S. Direct visualization of Escherichia coli chemotaxis receptor arrays using cryo-electron microscopy. Proceedings of the National Academy of Sciences of the United States of America. 104: 3777-81. PMID 17360429 DOI: 10.1073/Pnas.0610106104 |
0.359 |
|
| 2007 |
Zhang P, Weis RM, Peters PJ, Subramaniam S. Electron tomography of bacterial chemotaxis receptor assemblies. Methods in Cell Biology. 79: 373-84. PMID 17327165 DOI: 10.1016/S0091-679X(06)79014-8 |
0.606 |
|
| 2007 |
Lefman J, Morrison R, Subramaniam S. Automated 100-position specimen loader and image acquisition system for transmission electron microscopy. Journal of Structural Biology. 158: 318-26. PMID 17240161 DOI: 10.1016/J.Jsb.2006.11.007 |
0.317 |
|
| 2007 |
Zhang P, Khursigara C, Hartnell L, Subramaniam S. Molecular Architecture of Receptor Arrays in Intact E.coli Cells Determined Using Cryo-electron Tomography Microscopy and Microanalysis. 13. DOI: 10.1017/S1431927607079421 |
0.322 |
|
| 2007 |
Heymann J, Shi D, Kim S, Bliss D, Milne J, Subramaniam S. 3D Imaging of Melanoma Cells Using Automated “Ion Abrasion Scanning Electron Microscopy” Microscopy and Microanalysis. 13. DOI: 10.1017/S1431927607079287 |
0.337 |
|
| 2007 |
Liu J, McBride M, Subramaniam S. Ultrastructure of the Gliding Bacterium Flavobacterium johnsoniae Revealed by Cryo-electron Tomography Microscopy and Microanalysis. 13. DOI: 10.1017/S1431927607078889 |
0.314 |
|
| 2006 |
Subramaniam S. The SIV surface spike imaged by electron tomography: one leg or three? Plos Pathogens. 2. PMID 16933994 DOI: 10.1371/Journal.Ppat.0020091 |
0.347 |
|
| 2006 |
Heymann JA, Hayles M, Gestmann I, Giannuzzi LA, Lich B, Subramaniam S. Site-specific 3D imaging of cells and tissues with a dual beam microscope. Journal of Structural Biology. 155: 63-73. PMID 16713294 DOI: 10.1016/J.Jsb.2006.03.006 |
0.327 |
|
| 2006 |
Subramaniam S. Bridging the imaging gap in nanobiology with three-dimensional electron microscopy 2nd Asm-Ieee Embs Conference On Bio-, Micro- and Nanosystems. 37. DOI: 10.1017/S1431927606069194 |
0.369 |
|
| 2005 |
Bartesaghi A, Sapiro G, Subramaniam S. An energy-based three-dimensional segmentation approach for the quantitative interpretation of electron tomograms. Ieee Transactions On Image Processing : a Publication of the Ieee Signal Processing Society. 14: 1314-23. PMID 16190467 DOI: 10.1109/Tip.2005.852467 |
0.356 |
|
| 2005 |
Subramaniam S. Bridging the imaging gap: Visualizing subcellular architecture with electron tomography Current Opinion in Microbiology. 8: 316-322. PMID 15939356 DOI: 10.1016/J.Mib.2005.04.012 |
0.366 |
|
| 2004 |
Zhang P, Bos E, Heymann J, Gnaegi H, Kessel M, Peters PJ, Subramaniam S. Direct visualization of receptor arrays in frozen-hydrated sections and plunge-frozen specimens of E. coli engineered to overproduce the chemotaxis receptor Tsr. Journal of Microscopy. 216: 76-83. PMID 15369487 DOI: 10.1111/J.0022-2720.2004.01395.X |
0.322 |
|
| 2004 |
Hirai T, Subramaniam S. Structure and transport mechanism of the bacterial oxalate transporter OxIT Biophysical Journal. 87: 3600-3607. PMID 15339805 DOI: 10.1529/Biophysj.104.049320 |
0.316 |
|
| 2004 |
Lefman J, Zhang P, Hirai T, Weis RM, Juliani J, Bliss D, Kessel M, Bos E, Peters PJ, Subramaniam S. Three-dimensional electron microscopic imaging of membrane invaginations in Escherichia coli overproducing the chemotaxis receptor Tsr. Journal of Bacteriology. 186: 5052-61. PMID 15262942 DOI: 10.1128/Jb.186.15.5052-5061.2004 |
0.612 |
|
| 2004 |
Subramaniam S, Milne JLS. Three-dimensional electron microscopy at molecular resolution Annual Review of Biophysics and Biomolecular Structure. 33: 141-155. PMID 15139808 DOI: 10.1146/Annurev.Biophys.33.110502.140339 |
0.389 |
|
| 2003 |
Heymann JA, Hirai T, Shi D, Subramaniam S. Projection structure of the bacterial oxalate transporter OxlT at 3.4A resolution. Journal of Structural Biology. 144: 320-6. PMID 14643200 DOI: 10.1016/J.Jsb.2003.09.002 |
0.346 |
|
| 2003 |
Zhang P, Borgnia MJ, Mooney P, Shi D, Pan M, O'Herron P, Mao A, Brogan D, Milne JL, Subramaniam S. Automated image acquisition and processing using a new generation of 4K x 4K CCD cameras for cryo electron microscopic studies of macromolecular assemblies. Journal of Structural Biology. 143: 135-44. PMID 12972350 DOI: 10.1016/S1047-8477(03)00124-2 |
0.326 |
|
| 2003 |
Weis RM, Hirai T, Chalah A, Kessel M, Peters PJ, Subramaniam S. Electron microscopic analysis of membrane assemblies formed by the bacterial chemotaxis receptor Tsr. Journal of Bacteriology. 185: 3636-43. PMID 12775701 DOI: 10.1128/Jb.185.12.3636-3643.2003 |
0.586 |
|
| 2003 |
Hirai T, Heymann JA, Maloney PC, Subramaniam S. Structural model for 12-helix transporters belonging to the major facilitator superfamily. Journal of Bacteriology. 185: 1712-8. PMID 12591890 DOI: 10.1128/Jb.185.5.1712-1718.2003 |
0.334 |
|
| 2003 |
Wu X, Milne JLS, Borgnia MJ, Rostapshov AV, Subramaniam S, Brooks BR. A core-weighted fitting method for docking atomic structures into low-resolution maps: Application to cryo-electron microscopy Journal of Structural Biology. 141: 63-76. PMID 12576021 DOI: 10.1016/S1047-8477(02)00570-1 |
0.355 |
|
| 2003 |
Zhang P, Lefman J, Kessel M, Juliani J, Hirai T, Weis RM, Peters P, Subramaniam S. 3D imaging of membrane networks in a bacterial cell using electron tomography Microscopy and Microanalysis. 9: 1168-1169. DOI: 10.1017/S1431927603445844 |
0.58 |
|
| 2002 |
Subramaniam S, Hirai T, Henderson R. From structure to mechanism: electron crystallographic studies of bacteriorhodopsin. Philosophical Transactions. Series a, Mathematical, Physical, and Engineering Sciences. 360: 859-74. PMID 12804283 DOI: 10.1098/Rsta.2001.0971 |
0.357 |
|
| 2002 |
Milne JL, Shi D, Rosenthal PB, Sunshine JS, Domingo GJ, Wu X, Brooks BR, Perham RN, Henderson R, Subramaniam S. Molecular architecture and mechanism of an icosahedral pyruvate dehydrogenase complex: a multifunctional catalytic machine. The Embo Journal. 21: 5587-98. PMID 12411477 DOI: 10.1093/Emboj/Cdf574 |
0.304 |
|
| 2002 |
Hirai T, Heymann JA, Shi D, Sarker R, Maloney PC, Subramaniam S. Three-dimensional structure of a bacterial oxalate transporter. Nature Structural Biology. 9: 597-600. PMID 12118242 DOI: 10.1038/Nsb821 |
0.332 |
|
| 2001 |
Zhang P, Beatty A, Milne JLS, Subramaniam S. Automated data collection with a Tecnai 12 electron microscope: applications for molecular imaging by cryomicroscopy. Journal of Structural Biology. 135: 251-261. PMID 11722165 DOI: 10.1006/Jsbi.2001.4404 |
0.338 |
|
| 2001 |
Heymann JA, Sarker R, Hirai T, Shi D, Milne JL, Maloney PC, Subramaniam S. Projection structure and molecular architecture of OxlT, a bacterial membrane transporter. The Embo Journal. 20: 4408-13. PMID 11500368 DOI: 10.1093/Emboj/20.16.4408 |
0.313 |
|
| 2001 |
Zhang P, Beatty A, Milne JLS, Subramaniam S. Automated Data Collection with a Tecnai 12 Electron Microscope for Applications in Structural Biology Microscopy and Microanalysis. 7: 972-973. DOI: 10.1017/S1431927600030932 |
0.337 |
|
| 2000 |
Heymann JAW, Subramaniam S. Integration of deletion mutants of bovine rhodopsin into the membrane of the endoplasmic reticulum Molecular Membrane Biology. 17: 165-174. PMID 11128975 DOI: 10.1080/09687680050197392 |
0.3 |
|
| 2000 |
Faruqi AR, Subramaniam S. CCD detectors in high-resolution biological electron microscopy. Quarterly Reviews of Biophysics. 33: 1-27. PMID 11075387 DOI: 10.1017/S0033583500003577 |
0.325 |
|
| 2000 |
Subramaniam S, Henderson R. Crystallographic analysis of protein conformational changes in the bacteriorhodopsin photocycle Biochimica Et Biophysica Acta - Bioenergetics. 1460: 157-165. PMID 10984597 DOI: 10.1016/S0005-2728(00)00136-5 |
0.322 |
|
| 2000 |
Subramaniam S, Henderson R. Molecular mechanism of vectorial proton translocation by bacteriorhodopsin. Nature. 406: 653-7. PMID 10949309 DOI: 10.1038/35020614 |
0.326 |
|
| 1999 |
Subramaniam S, Henderson R. Electron crystallography of bacteriorhodopsin with millisecond time resolution Journal of Structural Biology. 128: 19-25. PMID 10600554 DOI: 10.1006/Jsbi.1999.4178 |
0.331 |
|
| 1999 |
Subramaniam S. The structure of bacteriorhodopsin: An emerging consensus Current Opinion in Structural Biology. 9: 462-468. PMID 10449372 DOI: 10.1016/S0959-440X(99)80065-7 |
0.313 |
|
| 1999 |
Subramaniam S, Lindahl M, Bullough P, Faruqi AR, Tittor J, Oesterhelt D, Brown L, Lanyi J, Henderson R. Protein conformational changes in the bacteriorhodopsin photocycle Journal of Molecular Biology. 287: 145-161. PMID 10074413 DOI: 10.1006/Jmbi.1999.2589 |
0.308 |
|
| 1997 |
Heymann JAW, Subramaniam S. Expression, stability, and membrane integration of truncation mutants of bovine rhodopsin Proceedings of the National Academy of Sciences of the United States of America. 94: 4966-4971. PMID 9144173 DOI: 10.1073/Pnas.94.10.4966 |
0.303 |
|
| 1997 |
Subramaniam S, Faruqi AR, Oesterhelt D, Henderson R. Electron diffraction studies of light-induced conformational changes in the Leu-93 → Ala bacteriorhodopsin mutant Proceedings of the National Academy of Sciences of the United States of America. 94: 1767-1772. PMID 9050853 DOI: 10.1073/Pnas.94.5.1767 |
0.307 |
|
| 1993 |
Subramaniam S, Gerstein M, Oesterhelt D, Henderson R. Electron diffraction analysis of structural changes in the photocycle of bacteriorhodopsin. The Embo Journal. 12: 1-8. DOI: 10.1002/J.1460-2075.1993.Tb05625.X |
0.341 |
|
| 1987 |
Subramaniam S, McConnell HM. Critical mixing in monolayer mixtures of phospholipid and cholesterol Journal of Physical Chemistry. 91: 1715-1718. DOI: 10.1021/J100291A010 |
0.414 |
|
| 1986 |
Subramaniam S, Seul M, McConnell HM. Lateral diffusion of specific antibodies bound to lipid monolayers on alkylated substrates. Proceedings of the National Academy of Sciences of the United States of America. 83: 1169-73. PMID 3006037 DOI: 10.1073/Pnas.83.5.1169 |
0.439 |
|
| 1985 |
Seul M, Subramaniam S, McConnell HM. Mono- and bilayers of phospholipids at interfaces: Interlayer coupling and phase stability Journal of Physical Chemistry. 89: 3592-3595. DOI: 10.1021/J100263A003 |
0.416 |
|
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