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William T McAllister - Publications

Affiliations: 
1973-1986 Microbiology University of Medicine and Dentistry of New Jersey, Piscataway Township, New Jersey, United States 
 1989-2004 Microbiology and Immunology SUNY Downstate Medical Center, Brooklyn, NY, United States 
 2004- Cell Biology Rowan University School of Osteopathic Medicine 
Area:
RNA polymerase
Website:
http://www.rowan.edu/som/research/cellbiology/faculty/mcAllister.html
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82 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2014 Molodtsov V, Anikin M, McAllister WT. The presence of an RNA:DNA hybrid that is prone to slippage promotes termination by T7 RNA polymerase. Journal of Molecular Biology. 426: 3095-3107. PMID 24976131 DOI: 10.1016/J.Jmb.2014.06.012  0.641
2014 Markov DA, Wojtas ID, Tessitore K, Henderson S, McAllister WT. Yeast DEAD box protein Mss116p is a transcription elongation factor that modulates the activity of mitochondrial RNA polymerase. Molecular and Cellular Biology. 34: 2360-9. PMID 24732805 DOI: 10.1128/Mcb.00160-14  0.528
2010 Thakar A, Gupta P, McAllister WT, Zlatanova J. Histone variant H2A.Z inhibits transcription in reconstituted nucleosomes. Biochemistry. 49: 4018-26. PMID 20387858 DOI: 10.1021/Bi1001618  0.384
2010 Savkina M, Temiakov D, McAllister WT, Anikin M. Multiple functions of yeast mitochondrial transcription factor Mtf1p during initiation. The Journal of Biological Chemistry. 285: 3957-64. PMID 19920143 DOI: 10.1074/Jbc.M109.051003  0.609
2009 Ma N, McAllister WT. In a head-on collision, two RNA polymerases approaching one another on the same DNA may pass by one another. Journal of Molecular Biology. 391: 808-12. PMID 19576223 DOI: 10.1016/J.Jmb.2009.06.060  0.637
2009 Markov DA, Savkina M, Anikin M, Del Campo M, Ecker K, Lambowitz AM, De Gnore JP, McAllister WT. Identification of proteins associated with the yeast mitochondrial RNA polymerase by tandem affinity purification Yeast. 26: 423-440. PMID 19536766 DOI: 10.1002/Yea.1672  0.549
2008 Kashkina EA, Anikin MV, McAllister WT, Kochetkov N, Temyakov DE. Determination of the melting site of the DNA duplex in the active center of bacterial RNA-polymerase by fluorescence quenching technique. Doklady. Biochemistry and Biophysics. 416: 285-9. PMID 18064834 DOI: 10.1134/S160767290705016X  0.516
2007 Bandwar RP, Ma N, Emanuel SA, Anikin M, Vassylyev DG, Patel SS, McAllister WT. The transition to an elongation complex by T7 RNA polymerase is a multistep process. The Journal of Biological Chemistry. 282: 22879-86. PMID 17548349 DOI: 10.1074/Jbc.M702589200  0.533
2007 Kashkina E, Anikin M, Brueckner F, Lehmann E, Kochetkov SN, McAllister WT, Cramer P, Temiakov D. Multisubunit RNA polymerases melt only a single DNA base pair downstream of the active site. The Journal of Biological Chemistry. 282: 21578-82. PMID 17526498 DOI: 10.1074/Jbc.C700098200  0.562
2007 Anikin M, Temiakov D, McAllister W, Savkina M. 38 Transcription initiation by yeast mitochondrial RNA polymerase Mitochondrion. 7: 415. DOI: 10.1016/J.Mito.2007.08.042  0.524
2006 Kashkina E, Anikin M, Brueckner F, Pomerantz RT, McAllister WT, Cramer P, Temiakov D. Template misalignment in multisubunit RNA polymerases and transcription fidelity. Molecular Cell. 24: 257-66. PMID 17052459 DOI: 10.1016/j.molcel.2006.10.001  0.507
2006 Pomerantz RT, Temiakov D, Anikin M, Vassylyev DG, McAllister WT. A mechanism of nucleotide misincorporation during transcription due to template-strand misalignment. Molecular Cell. 24: 245-55. PMID 17052458 DOI: 10.1016/J.Molcel.2006.08.014  0.599
2006 Zlatanova J, McAllister WT, Borukhov S, Leuba SH. Single-molecule approaches reveal the idiosyncrasies of RNA polymerases. Structure (London, England : 1993). 14: 953-66. PMID 16765888 DOI: 10.1016/J.Str.2006.03.016  0.528
2005 Ma K, Temiakov D, Anikin M, McAllister WT. Probing conformational changes in T7 RNA polymerase during initiation and termination by using engineered disulfide linkages. Proceedings of the National Academy of Sciences of the United States of America. 102: 17612-7. PMID 16301518 DOI: 10.1073/Pnas.0508865102  0.657
2005 Pomerantz RT, Ramjit R, Gueroui Z, Place C, Anikin M, Leuba S, Zlatanova J, McAllister WT. A tightly regulated molecular motor based upon T7 RNA polymerase. Nano Letters. 5: 1698-703. PMID 16159208 DOI: 10.1021/Nl0509125  0.506
2004 Jiang M, Ma N, Vassylyev DG, McAllister WT. RNA displacement and resolution of the transcription bubble during transcription by T7 RNA polymerase. Molecular Cell. 15: 777-88. PMID 15350221 DOI: 10.1016/J.Molcel.2004.07.019  0.633
2004 Temiakov D, Patlan V, Anikin M, McAllister WT, Yokoyama S, Vassylyev DG. Structural basis for substrate selection by t7 RNA polymerase. Cell. 116: 381-91. PMID 15016373 DOI: 10.1016/S0092-8674(04)00059-5  0.566
2003 Temiakov D, Anikin M, Ma K, Jiang M, McAllister WT. Probing the organization of transcription complexes using photoreactive 4-thio-substituted analogs of uracil and thymidine. Methods in Enzymology. 371: 133-43. PMID 14712696 DOI: 10.1016/S0076-6879(03)71009-X  0.39
2003 Temiakov D, Tahirov TH, Anikin M, McAllister WT, Vassylyev DG, Yokoyama S. Crystallization and preliminary crystallographic analysis of T7 RNA polymerase elongation complex. Acta Crystallographica. Section D, Biological Crystallography. 59: 185-7. PMID 12499566 DOI: 10.1107/S0907444902019777  0.582
2003 Kukarin A, Rong M, McAllister WT. Exposure of T7 RNA polymerase to the isolated binding region of the promoter allows transcription from a single-stranded template. The Journal of Biological Chemistry. 278: 2419-24. PMID 12441338 DOI: 10.1074/Jbc.M210058200  0.535
2002 Tahirov TH, Temiakov D, Anikin M, Patlan V, McAllister WT, Vassylyev DG, Yokoyama S. Structure of a T7 RNA polymerase elongation complex at 2.9 A resolution. Nature. 420: 43-50. PMID 12422209 DOI: 10.1038/Nature01129  0.671
2002 Temiakov D, Anikin M, McAllister WT. Characterization of T7 RNA polymerase transcription complexes assembled on nucleic acid scaffolds. The Journal of Biological Chemistry. 277: 47035-43. PMID 12351656 DOI: 10.1074/Jbc.M208923200  0.638
2002 Ma K, Temiakov D, Jiang M, Anikin M, McAllister WT. Major conformational changes occur during the transition from an initiation complex to an elongation complex by T7 RNA polymerase. The Journal of Biological Chemistry. 277: 43206-15. PMID 12186873 DOI: 10.1074/Jbc.M206658200  0.619
2002 Imburgio D, Anikin M, McAllister WT. Effects of substitutions in a conserved DX(2)GR sequence motif, found in many DNA-dependent nucleotide polymerases, on transcription by T7 RNA polymerase. Journal of Molecular Biology. 319: 37-51. PMID 12051935 DOI: 10.1016/S0022-2836(02)00261-9  0.685
2001 Jiang M, Rong M, Martin C, McAllister WT. Interrupting the template strand of the T7 promoter facilitates translocation of the DNA during initiation, reducing transcript slippage and the release of abortive products Journal of Molecular Biology. 310: 509-522. PMID 11439019 DOI: 10.1006/Jmbi.2001.4793  0.613
2001 Temiakov D, Mentesana PE, Ma K, Mustaev A, Borukhov S, McAllister WT. The specificity loop of T7 RNA polymerase interacts first with the promoter and then with the elongating transcript, suggesting a mechanism for promoter clearance. Proceedings of the National Academy of Sciences of the United States of America. 97: 14109-14. PMID 11095736 DOI: 10.1073/Pnas.250473197  0.64
2000 Mentesana PE, Chin-Bow ST, Sousa R, McAllister WT. Characterization of halted T7 RNA polymerase elongation complexes reveals multiple factors that contribute to stability. Journal of Molecular Biology. 302: 1049-62. PMID 11183774 DOI: 10.1006/Jmbi.2000.4114  0.575
2000 Imburgio D, Rong M, Ma K, McAllister WT. Studies of promoter recognition and start site selection by T7 RNA polymerase using a comprehensive collection of promoter variants. Biochemistry. 39: 10419-30. PMID 10956032 DOI: 10.1021/Bi000365W  0.631
1999 Rong M, Castagna R, McAllister WT. Cloning and purification of bacteriophage K11 RNA polymerase. Biotechniques. 27: 690, 692, 694. PMID 10524308 DOI: 10.2144/99274Bm13  0.489
1999 Gopal V, Brieba LG, Guajardo R, McAllister WT, Sousa R. Characterization of structural features important for T7 RNAP elongation complex stability reveals competing complex conformations and a role for the non-template strand in RNA displacement. Journal of Molecular Biology. 290: 411-31. PMID 10390341 DOI: 10.1006/Jmbi.1999.2836  0.625
1999 Place C, Oddos J, Buc H, McAllister WT, Buckle M. Studies of contacts between T7 RNA polymerase and its promoter reveal features in common with multisubunit RNA polymerases. Biochemistry. 38: 4948-57. PMID 10213596 DOI: 10.1021/Bi982689E  0.643
1998 He B, Kukarin A, Temiakov D, Chin-Bow ST, Lyakhov DL, Rong M, Durbin RK, McAllister WT. Characterization of an unusual, sequence-specific termination signal for T7 RNA polymerase. The Journal of Biological Chemistry. 273: 18802-11. PMID 9668054 DOI: 10.1074/jbc.273.30.18802  0.525
1998 Lyakhov DL, He B, Zhang X, Studier FW, Dunn JJ, McAllister WT. Pausing and termination by bacteriophage T7 RNA polymerase. Journal of Molecular Biology. 280: 201-13. PMID 9654445 DOI: 10.1006/Jmbi.1998.1854  0.64
1998 Rong M, Durbin RK, McAllister WT. Template strand switching by T7 RNA polymerase. The Journal of Biological Chemistry. 273: 10253-60. PMID 9553077 DOI: 10.1074/Jbc.273.17.10253  0.659
1998 Rong M, He B, McAllister WT, Durbin RK. Promoter specificity determinants of T7 RNA polymerase. Proceedings of the National Academy of Sciences of the United States of America. 95: 515-9. PMID 9435223 DOI: 10.1073/Pnas.95.2.515  0.65
1997 Lyakhov DL, He B, Zhang X, Studier FW, Dunn JJ, McAllister WT. Mutant bacteriophage T7 RNA polymerases with altered termination properties. Journal of Molecular Biology. 269: 28-40. PMID 9192998 DOI: 10.1006/Jmbi.1997.1015  0.592
1997 He B, Rong M, Lyakhov D, Gartenstein H, Diaz G, Castagna R, McAllister WT, Durbin RK. Rapid mutagenesis and purification of phage RNA polymerases. Protein Expression and Purification. 9: 142-51. PMID 9116496 DOI: 10.1006/Prep.1996.0663  0.57
1997 He B, Rong M, Durbin RK, McAllister WT. A mutant T7 RNA polymerase that is defective in RNA binding and blocked in the early stages of transcription. Journal of Molecular Biology. 265: 275-88. PMID 9018042 DOI: 10.1006/Jmbi.1996.0741  0.659
1996 Diaz GA, Rong M, McAllister WT, Durbin RK. The stability of abortively cycling T7 RNA polymerase complexes depends upon template conformation Biochemistry. 35: 10837-10843. PMID 8718875 DOI: 10.1021/Bi960488+  0.56
1995 He B, McAllister WT, Durbin RK. Phage RNA polymerase vectors that allow efficient gene expression in both prokaryotic and eukaryotic cells. Gene. 164: 75-9. PMID 7590325 DOI: 10.1016/0378-1119(95)00475-L  0.575
1994 Macdonald LE, Durbin RK, Dunn JJ, McAllister WT. Characterization of two types of termination signal for bacteriophage T7 RNA polymerase. Journal of Molecular Biology. 238: 145-58. PMID 8158645 DOI: 10.1006/Jmbi.1994.1277  0.587
1993 Raskin CA, Diaz GA, McAllister WT. T7 RNA polymerase mutants with altered promoter specificities Proceedings of the National Academy of Sciences of the United States of America. 90: 3147-3151. PMID 8475053 DOI: 10.1073/Pnas.90.8.3147  0.631
1993 Diaz GA, Raskin CA, McAllister WT. Hierarchy of base-pair preference in the binding domain of the bacteriophage T7 promoter Journal of Molecular Biology. 229: 805-811. PMID 8445647 DOI: 10.1006/Jmbi.1993.1086  0.536
1993 Macdonald LE, Zhou Y, McAllister WT. Termination and slippage by bacteriophage T7 RNA polymerase. Journal of Molecular Biology. 232: 1030-47. PMID 8371265 DOI: 10.1006/Jmbi.1993.1458  0.638
1993 McAllister WT, Raskin CA. The phage RNA polymerases are related to DNA polymerase and reverse transcriptases Molecular Microbiology. 10: 1-6. PMID 7526118 DOI: 10.1111/J.1365-2958.1993.Tb00897.X  0.657
1992 Chen WJ, Gross L, Joho KE, McAllister WT. A modified kanamycin-resistance cassette to facilitate two-codon insertion mutagenesis. Gene. 111: 143-4. PMID 1547951 DOI: 10.1016/0378-1119(92)90617-X  0.327
1992 Raskin CA, Diaz G, Joho K, McAllister WT. Substitution of a single bacteriophage T3 residue in bacteriophage T7 RNA polymerase at position 748 results in a switch in promoter specificity Journal of Molecular Biology. 228: 506-515. PMID 1453460 DOI: 10.1016/0022-2836(92)90838-B  0.58
1992 Gross L, Chen WJ, McAllister WT. Characterization of bacteriophage T7 RNA polymerase by linker insertion mutagenesis. Journal of Molecular Biology. 228: 488-505. PMID 1453459 DOI: 10.1016/0022-2836(92)90837-A  0.585
1992 Luhrs CA, Raskin CA, Durbin R, Wu B, Sadasivan E, McAllister W, Rothenberg SP. Transfection of a glycosylated phosphatidylinositol-anchored folate-binding protein complementary DNA provides cells with the ability to survive in low folate medium Journal of Clinical Investigation. 90: 840-847. PMID 1387884 DOI: 10.1172/Jci115959  0.36
1990 Giordano TJ, Deuschle U, Bujard H, McAllister WT. Regulation of coliphage T3 and T7 RNA polymerases by the lac repressor-operator system. Gene. 84: 209-19. PMID 2693210 DOI: 10.1016/0378-1119(89)90494-0  0.605
1990 Rodriguez D, Zhou YW, Rodriguez JR, Durbin RK, Jimenez V, McAllister WT, Esteban M. Regulated expression of nuclear genes by T3 RNA polymerase and lac repressor, using recombinant vaccinia virus vectors. Journal of Virology. 64: 4851-7. PMID 2204724 DOI: 10.1128/JVI.64.10.4851-4857.1990  0.382
1990 Joho KE, Gross LB, McGraw NJ, Raskin C, McAllister WT. Identification of a region of the bacteriophage T3 and T7 RNA polymerases that determines promoter specificity Journal of Molecular Biology. 215: 31-39. PMID 2204707 DOI: 10.1016/S0022-2836(05)80092-0  0.668
1990 Klement JF, Moorefield MB, Jorgensen E, Brown JE, Risman S, McAllister WT. Discrimination between bacteriophage T3 and T7 promoters by the T3 and T7 RNA polymerases depends primarily upon a three base-pair region located 10 to 12 base-pairs upstream from the start site. Journal of Molecular Biology. 215: 21-9. PMID 2204706 DOI: 10.1016/S0022-2836(05)80091-9  0.556
1990 Zhou Y, Giordano TJ, Durbin RK, McAllister WT. Synthesis of functional mRNA in mammalian cells by bacteriophage T3 RNA polymerase. Molecular and Cellular Biology. 10: 4529-37. PMID 2167433 DOI: 10.1128/Mcb.10.9.4529  0.568
1990 Giordano TJ, McAllister WT. Optimization of the hygromycin B resistance-conferring gene as a dominant selectable marker in mammalian cells Gene. 88: 285-288. PMID 2161383 DOI: 10.1016/0378-1119(90)90045-S  0.3
1989 Deuschle U, Pepperkok R, Wang FB, Giordano TJ, McAllister WT, Ansorge W, Bujard H. Regulated expression of foreign genes in mammalian cells under the control of coliphage T3 RNA polymerase and lac repressor. Proceedings of the National Academy of Sciences of the United States of America. 86: 5400-4. PMID 2664783 DOI: 10.1073/pnas.86.14.5400  0.518
1989 Ling ML, Risman SS, Klement JF, McGraw N, McAllister WT. Abortive initiation by bacteriophage T3 and T7 RNA polymerases under conditions of limiting substrate. Nucleic Acids Research. 17: 1605-18. PMID 2646596 DOI: 10.1093/Nar/17.4.1605  0.621
1988 Schäffner AR, Jorgensen ED, McAllister WT, Hartmann GR. Specific labelling of the active site of T7 RNA polymerase. Nucleic Acids Research. 15: 8773-81. PMID 3684573 DOI: 10.1093/Nar/15.21.8773  0.545
1986 Brown JE, Bailey JN, McAllister WT. Sequence of a region near the left end of bacteriophage T3 DNA that contains three promoters for the E. coli RNA polymerase. Nucleic Acids Research. 14: 4696. PMID 3520490 DOI: 10.1093/nar/14.11.4696  0.543
1986 Morris CE, Klement JF, McAllister WT. Cloning and expression of the bacteriophage T3 RNA polymerase gene. Gene. 41: 193-200. PMID 3011596 DOI: 10.1016/0378-1119(86)90098-3  0.619
1986 Brown JE, Klement JF, McAllister WT. Sequences of three promoters for the bacteriophage SP6 RNA polymerase. Nucleic Acids Research. 14: 3521-6. PMID 3010240 DOI: 10.1093/Nar/14.8.3521  0.596
1986 F. Klement J, Ling M, McAllister WT. Sequencing of DNA using T3 RNA polymerase and chain terminating ribonucleotide analogs Gene Analysis Techniques. 3: 59-66. DOI: 10.1016/0735-0651(86)90001-4  0.662
1985 McGraw NJ, Bailey JN, Cleaves GR, Dembinski DR, Gocke CR, Joliffe LK, MacWright RS, McAllister WT. Sequence and analysis of the gene for bacteriophage T3 RNA polymerase. Nucleic Acids Research. 13: 6753-66. PMID 3903658 DOI: 10.1093/Nar/13.18.6753  0.659
1983 Bailey JN, Klement JF, McAllister WT. Relationship between promoter structure and template specificities exhibited by the bacteriophage T3 and T7 RNA polymerases. Proceedings of the National Academy of Sciences of the United States of America. 80: 2814-8. PMID 6574450 DOI: 10.1073/Pnas.80.10.2814  0.618
1982 Jolliffe LK, Carter AD, McAllister WT. Identification of a potential control region in bacteriophage T7 late promoters. Nature. 299: 653-6. PMID 7121598 DOI: 10.1038/299653A0  0.601
1981 Carter AD, McAllister WT. Sequences of three class II promoters for the bacteriophage T7 RNA polymerase Journal of Molecular Biology. 153: 825-830. PMID 7338927 DOI: 10.1016/0022-2836(81)90421-6  0.539
1981 Carter AD, Morris CE, McAllister WT. Revised transcription map of the late region of bacteriophage T7 DNA. Journal of Virology. 37: 636-42. PMID 7218435 DOI: 10.1128/Jvi.37.2.636-642.1981  0.624
1981 McAllister WT, Morris C, Rosenberg AH, Studier FW. Utilization of bacteriophage T7 late promoters in recombinant plasmids during infection. Journal of Molecular Biology. 153: 527-44. PMID 7040687 DOI: 10.1016/0022-2836(81)90406-X  0.53
1981 McCarron RJ, McAllister WT. Effect of alterations in reaction conditions on vaccinia virus transcription in vitro Behavioural Brain Research. 3: 392-396. DOI: 10.1016/0042-6822(81)90165-3  0.349
1980 Bailey JN, Mcallister WT. Mapping of promoter sites utilized by T3 RNA polymerase on T3 DNA Nucleic Acids Research. 8: 5071-5088. PMID 7443532 DOI: 10.1093/nar/8.21.5071  0.552
1980 Mcallister WT, Carter AD. Regulation of promoter selection by the bacteriophage T7 RNA polymerase in vitro Nucleic Acids Research. 8: 4821-4838. PMID 7443526 DOI: 10.1093/nar/8.20.4821  0.431
1980 Bailey JN, Dembinski DR, McAllister WT. Derivation of a restriction map of bacteriophage T3 DNA and comparison with the map of bacteriophage T7 DNA. Journal of Virology. 35: 176-83. PMID 6251266 DOI: 10.1128/Jvi.35.1.176-183.1980  0.465
1978 McCarron RJ, McAllister WT. Effect of ribosomal loading on the structural stability of bacteriophage T7 early messenger RNAs Biochemical and Biophysical Research Communications. 80: 789-796. PMID 346020 DOI: 10.1016/0006-291X(78)91314-1  0.341
1978 McAllister WT, Wu HL. Regulation of transcription of the late genes of bacteriophage T7 Proceedings of the National Academy of Sciences of the United States of America. 75: 804-808. PMID 273244 DOI: 10.1073/Pnas.75.2.804  0.589
1977 McAllister WT, McCarron RJ. Hybridization of the in vitro products of bacteriophage T7 RNA polymerase to restriction fragments of T7 DNA Virology. 82: 288-298. PMID 919342 DOI: 10.1016/0042-6822(77)90004-6  0.551
1977 McAllister WT, Barrett CL. Hybridization mapping of restriction fragments from the early region of bacteriophage T7 DNA Virology. 82: 275-287. PMID 919341 DOI: 10.1016/0042-6822(77)90003-4  0.538
1977 McAllister WT, Barrett CL. Roles of the early genes of bacteriophage T7 in shutoff of host macromolecular synthesis Journal of Virology. 23: 543-553. PMID 330878 DOI: 10.1128/jvi.23.3.543-553.1977  0.338
1974 Küpper HA, McAllister WT, Bautz EK. Comparison of Escherichia coli and T3 RNA polymerases. Differential inhibition of transcription by various drugs. European Journal of Biochemistry. 38: 581-6. PMID 4589542 DOI: 10.1111/J.1432-1033.1973.Tb03093.X  0.532
1974 Bautz EK, McAllister WT, Küpper H, Beck E, Bautz FA. Initiation of transcription by RNA polymerases of Escherichia coli and phage T3. Basic Life Sciences. 3: 115-23. PMID 4362804 DOI: 10.1007/978-1-4613-4529-9_10  0.597
1973 McAllister WT, Küpper H, Bautz EK. Kinetics of transcription by the bacteriophage-T3 RNA polymerase in vitro. European Journal of Biochemistry. 34: 489-501. PMID 4577197 DOI: 10.1111/J.1432-1033.1973.Tb02785.X  0.603
1973 Dunn JJ, McAllister WT, Bautz EK. Transcription in vitro of T3 DNA by Escherichia coli and T3 RNA polymerases. Analysis of the products in cell-free protein-synthesizing system. European Journal of Biochemistry. 29: 500-8. PMID 4563342 DOI: 10.1111/J.1432-1033.1972.Tb02014.X  0.639
1972 Dunn JJ, McAllister WT, Bautz EK. In vitro transcription of T3 DNA by Escherichia coli and T3 polymerases. Virology. 48: 112-25. PMID 4552786 DOI: 10.1016/0042-6822(72)90119-5  0.61
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