Year |
Citation |
Score |
2022 |
Rees H, Rusholme-Pilcher R, Bailey P, Colmer J, White B, Reynolds C, Ward SJ, Coombes B, Graham CA, de Barros Dantas LL, Dodd AN, Hall A. Circadian regulation of the transcriptome in a complex polyploid crop. Plos Biology. 20: e3001802. PMID 36227835 DOI: 10.1371/journal.pbio.3001802 |
0.529 |
|
2022 |
Cuitun-Coronado D, Rees H, Colmer J, Hall A, de Barros Dantas LL, Dodd AN. Circadian and diel regulation of photosynthesis in the bryophyte Marchantia polymorpha. Plant, Cell & Environment. PMID 35611455 DOI: 10.1111/pce.14364 |
0.479 |
|
2022 |
Greenwood M, Hall AJW, Locke JCW. High Spatial Resolution Luciferase Imaging of the Arabidopsis thaliana Circadian Clock. Methods in Molecular Biology (Clifton, N.J.). 2398: 47-55. PMID 34674166 DOI: 10.1007/978-1-0716-1912-4_4 |
0.697 |
|
2021 |
Gardiner LJ, Rusholme-Pilcher R, Colmer J, Rees H, Crescente JM, Carrieri AP, Duncan S, Pyzer-Knapp EO, Krishna R, Hall A. Interpreting machine learning models to investigate circadian regulation and facilitate exploration of clock function. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34353905 DOI: 10.1073/pnas.2103070118 |
0.356 |
|
2020 |
Rees H, Joynson R, Brown JKM, Hall A. Naturally occurring circadian rhythm variation associated with clock gene loci in Swedish Arabidopsis accessions. Plant, Cell & Environment. PMID 33179278 DOI: 10.1111/pce.13941 |
0.459 |
|
2020 |
Lu FH, McKenzie N, Gardiner LJ, Luo MC, Hall A, Bevan MW. Reduced chromatin accessibility underlies gene expression differences in homologous chromosome arms of diploid Aegilops tauschii and hexaploid wheat. Gigascience. 9. PMID 32562491 DOI: 10.1093/Gigascience/Giaa070 |
0.433 |
|
2020 |
Concia L, Veluchamy A, Ramirez-Prado JS, Martin-Ramirez A, Huang Y, Perez M, Domenichini S, Rodriguez Granados NY, Kim S, Blein T, Duncan S, Pichot C, Manza-Mianza D, Juery C, Paux E, ... ... Hall A, et al. Wheat chromatin architecture is organized in genome territories and transcription factories. Genome Biology. 21: 104. PMID 32349780 DOI: 10.1186/S13059-020-01998-1 |
0.333 |
|
2019 |
Greenwood M, Domijan M, Gould PD, Hall AJW, Locke JCW. Coordinated circadian timing through the integration of local inputs in Arabidopsis thaliana. Plos Biology. 17: e3000407. PMID 31415556 DOI: 10.1371/journal.pbio.3000407 |
0.737 |
|
2019 |
Rees H, Duncan S, Gould P, Wells R, Greenwood M, Brabbs T, Hall A. A high-throughput delayed fluorescence method reveals underlying differences in the control of circadian rhythms in and . Plant Methods. 15: 51. PMID 31139241 DOI: 10.1186/S13007-019-0436-6 |
0.474 |
|
2019 |
Gardiner LJ, Wingen LU, Bailey P, Joynson R, Brabbs T, Wright J, Higgins JD, Hall N, Griffiths S, Clavijo BJ, Hall A. Analysis of the recombination landscape of hexaploid bread wheat reveals genes controlling recombination and gene conversion frequency. Genome Biology. 20: 69. PMID 30982471 DOI: 10.1186/S13059-019-1675-6 |
0.351 |
|
2018 |
Gould PD, Domijan M, Greenwood M, Tokuda IT, Rees H, Kozma-Bognar L, Hall AJ, Locke JC. Coordination of robust single cell rhythms in the circadian clock via spatial waves of gene expression. Elife. 7. PMID 29697372 DOI: 10.7554/Elife.31700 |
0.814 |
|
2016 |
Johnson JR, D'Amore R, Thain SC, Craig T, McCue HV, Hertz-Fowler C, Hall N, Hall AJ. GeneMill: A 21st century platform for innovation. Biochemical Society Transactions. 44: 681-3. PMID 27284025 DOI: 10.1042/BST20160012 |
0.757 |
|
2015 |
Voß U, Wilson MH, Kenobi K, Gould PD, Robertson FC, Peer WA, Lucas M, Swarup K, Casimiro I, Holman TJ, Wells DM, Péret B, Goh T, Fukaki H, Hodgman TC, ... ... Hall AJ, et al. The circadian clock rephases during lateral root organ initiation in Arabidopsis thaliana. Nature Communications. 6: 7641. PMID 26144255 DOI: 10.1038/Ncomms8641 |
0.453 |
|
2015 |
Kusakina J, Rutterford Z, Cotter S, Martí MC, Laurie DA, Greenland AJ, Hall A, Webb AA. Barley Hv CIRCADIAN CLOCK ASSOCIATED 1 and Hv PHOTOPERIOD H1 Are Circadian Regulators That Can Affect Circadian Rhythms in Arabidopsis. Plos One. 10: e0127449. PMID 26076005 DOI: 10.1371/Journal.Pone.0127449 |
0.637 |
|
2015 |
Tindall AJ, Waller J, Greenwood M, Gould PD, Hartwell J, Hall A. A comparison of high-throughput techniques for assaying circadian rhythms in plants. Plant Methods. 11: 32. PMID 25987891 DOI: 10.1186/S13007-015-0071-9 |
0.457 |
|
2015 |
Tindall AJ, Waller J, Greenwood M, Gould PD, Hartwell J, Hall A. A comparison of high-throughput techniques for assaying circadian rhythms in plants Plant Methods. 11. DOI: 10.1186/s13007-015-0071-9 |
0.338 |
|
2014 |
Gawro?ski P, Ariyadasa R, Himmelbach A, Poursarebani N, Kilian B, Stein N, Steuernagel B, Hensel G, Kumlehn J, Sehgal SK, Gill BS, Gould P, Hall A, Schnurbusch T. A distorted circadian clock causes early flowering and temperature-dependent variation in spike development in the Eps-3Am mutant of einkorn wheat. Genetics. 196: 1253-61. PMID 24443443 DOI: 10.1534/Genetics.113.158444 |
0.53 |
|
2014 |
Gyllenstrand N, Karlgren A, Clapham D, Holm K, Hall A, Gould PD, Källman T, Lagercrantz U. No time for spruce: rapid dampening of circadian rhythms in Picea abies (L. Karst). Plant & Cell Physiology. 55: 535-50. PMID 24363286 DOI: 10.1093/Pcp/Pct199 |
0.576 |
|
2014 |
Kusakina J, Gould PD, Hall A. A fast circadian clock at high temperatures is a conserved feature across Arabidopsis accessions and likely to be important for vegetative yield Plant, Cell and Environment. 37: 327-340. PMID 23777196 DOI: 10.1111/Pce.12152 |
0.556 |
|
2014 |
Dodd AN, Kusakina J, Hall A, Gould PD, Hanaoka M. The circadian regulation of photosynthesis Photosynthesis Research. 119: 181-190. PMID 23529849 DOI: 10.1007/S11120-013-9811-8 |
0.548 |
|
2013 |
MacGregor DR, Gould P, Foreman J, Griffiths J, Bird S, Page R, Stewart K, Steel G, Young J, Paszkiewicz K, Millar AJ, Halliday KJ, Hall AJ, Penfield S. HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES1 is required for circadian periodicity through the promotion of nucleo-cytoplasmic mRNA export in Arabidopsis. The Plant Cell. 25: 4391-404. PMID 24254125 DOI: 10.1105/Tpc.113.114959 |
0.673 |
|
2013 |
Costa MJ, Finkenstädt B, Roche V, Lévi F, Gould PD, Foreman J, Halliday K, Hall A, Rand DA. Inference on periodicity of circadian time series. Biostatistics (Oxford, England). 14: 792-806. PMID 23743206 DOI: 10.1093/Biostatistics/Kxt020 |
0.367 |
|
2013 |
Gould PD, Ugarte N, Domijan M, Costa M, Foreman J, Macgregor D, Rose K, Griffiths J, Millar AJ, Finkenstädt B, Penfield S, Rand DA, Halliday KJ, Hall AJ. Network balance via CRY signalling controls the Arabidopsis circadian clock over ambient temperatures. Molecular Systems Biology. 9: 650. PMID 23511208 DOI: 10.1038/Msb.2013.7 |
0.659 |
|
2012 |
Brenchley R, Spannagl M, Pfeifer M, Barker GL, D'Amore R, Allen AM, McKenzie N, Kramer M, Kerhornou A, Bolser D, Kay S, Waite D, Trick M, Bancroft I, Gu Y, ... ... Hall A, et al. Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature. 491: 705-10. PMID 23192148 DOI: 10.1038/Nature11650 |
0.337 |
|
2011 |
Ashelford K, Eriksson ME, Allen CM, D'Amore R, Johansson M, Gould P, Kay S, Millar AJ, Hall N, Hall A. Full genome re-sequencing reveals a novel circadian clock mutation in Arabidopsis. Genome Biology. 12: R28. PMID 21429190 DOI: 10.1186/Gb-2011-12-3-R28 |
0.73 |
|
2011 |
Johansson M, McWatters HG, Bakó L, Takata N, Gyula P, Hall A, Somers DE, Millar AJ, Eriksson ME. Partners in time: EARLY BIRD associates with ZEITLUPE and regulates the speed of the Arabidopsis clock. Plant Physiology. 155: 2108-22. PMID 21300918 DOI: 10.1104/Pp.110.167155 |
0.81 |
|
2011 |
Wenden B, Kozma-Bognár L, Edwards KD, Hall AJ, Locke JC, Millar AJ. Light inputs shape the Arabidopsis circadian system. The Plant Journal : For Cell and Molecular Biology. 66: 480-91. PMID 21255161 DOI: 10.1111/J.1365-313X.2011.04505.X |
0.832 |
|
2009 |
Gould PD, Diaz P, Hogben C, Kusakina J, Salem R, Hartwell J, Hall A. Delayed fluorescence as a universal tool for the measurement of circadian rhythms in higher plants Plant Journal. 58: 893-901. PMID 19638147 DOI: 10.1111/J.1365-313X.2009.03819.X |
0.566 |
|
2009 |
Penfield S, Hall A. A role for multiple circadian clock genes in the response to signals that break seed dormancy in Arabidopsis. The Plant Cell. 21: 1722-32. PMID 19542296 DOI: 10.1105/Tpc.108.064022 |
0.593 |
|
2009 |
Resco V, Hartwell J, Hall A. Ecological implications of plants ability to tell the time. Ecology Letters. 12: 583-92. PMID 19504722 DOI: 10.1111/J.1461-0248.2009.01295.X |
0.496 |
|
2009 |
Davis AM, Hall A, Millar AJ, Darrah C, Davis SJ. Protocol: Streamlined sub-protocols for floral-dip transformation and selection of transformants in Arabidopsis thaliana. Plant Methods. 5: 3. PMID 19250520 DOI: 10.1186/1746-4811-5-3 |
0.672 |
|
2008 |
Kusakina J, Hartwell J, Hall A. Investigating effects of temperature on the circadian clock in plants Comparative Biochemistry and Physiology a-Molecular & Integrative Physiology. 150. DOI: 10.1016/J.Cbpa.2008.04.397 |
0.488 |
|
2008 |
Costa N, Hartwell J, Hall A. The critical role of the Arabidopsis circadian clock at high temperature Comparative Biochemistry and Physiology a-Molecular & Integrative Physiology. 150. DOI: 10.1016/J.Cbpa.2008.04.396 |
0.553 |
|
2008 |
Hall A, Gould P. Temperature compensation of the Arabidopsis circadian clock Comparative Biochemistry and Physiology a-Molecular & Integrative Physiology. 150. DOI: 10.1016/J.Cbpa.2008.04.393 |
0.497 |
|
2007 |
Salisbury FJ, Hall A, Grierson CS, Halliday KJ. Phytochrome coordinates Arabidopsis shoot and root development. The Plant Journal : For Cell and Molecular Biology. 50: 429-38. PMID 17419844 DOI: 10.1111/J.1365-313X.2007.03059.X |
0.407 |
|
2007 |
Hall A, Brown P. Monitoring circadian rhythms in Arabidopsis thaliana using luciferase reporter genes. Methods in Molecular Biology (Clifton, N.J.). 362: 143-52. PMID 17417007 DOI: 10.1007/978-1-59745-257-1_10 |
0.569 |
|
2007 |
McWatters HG, Kolmos E, Hall A, Doyle MR, Amasino RM, Gyula P, Nagy F, Millar AJ, Davis SJ. ELF4 is required for oscillatory properties of the circadian clock. Plant Physiology. 144: 391-401. PMID 17384164 DOI: 10.1104/Pp.107.096206 |
0.82 |
|
2006 |
Locke JC, Kozma-Bognár L, Gould PD, Fehér B, Kevei E, Nagy F, Turner MS, Hall A, Millar AJ. Experimental validation of a predicted feedback loop in the multi-oscillator clock of Arabidopsis thaliana. Molecular Systems Biology. 2: 59. PMID 17102804 DOI: 10.1038/Msb4100102 |
0.812 |
|
2006 |
Wilkinson MJ, Owen SM, Possell M, Hartwell J, Gould P, Hall A, Vickers C, Nicholas Hewitt C. Circadian control of isoprene emissions from oil palm (Elaeis guineensis). The Plant Journal : For Cell and Molecular Biology. 47: 960-8. PMID 16899082 DOI: 10.1111/J.1365-313X.2006.02847.X |
0.374 |
|
2006 |
Southern MM, Brown PE, Hall A. Luciferases as reporter genes. Methods in Molecular Biology (Clifton, N.J.). 323: 293-305. PMID 16739586 DOI: 10.1385/1-59745-003-0:293 |
0.801 |
|
2006 |
Gould PD, Locke JC, Larue C, Southern MM, Davis SJ, Hanano S, Moyle R, Milich R, Putterill J, Millar AJ, Hall A. The molecular basis of temperature compensation in the Arabidopsis circadian clock. The Plant Cell. 18: 1177-87. PMID 16617099 DOI: 10.1105/Tpc.105.039990 |
0.795 |
|
2006 |
Edwards KD, Anderson PE, Hall A, Salathia NS, Locke JC, Lynn JR, Straume M, Smith JQ, Millar AJ. FLOWERING LOCUS C mediates natural variation in the high-temperature response of the Arabidopsis circadian clock. The Plant Cell. 18: 639-50. PMID 16473970 DOI: 10.1105/Tpc.105.038315 |
0.813 |
|
2006 |
Darrah C, Taylor BL, Edwards KD, Brown PE, Hall A, McWatters HG. Analysis of phase of LUCIFERASE expression reveals novel circadian quantitative trait loci in Arabidopsis Plant Physiology. 140: 1464-1474. PMID 16461388 DOI: 10.1104/Pp.105.074518 |
0.823 |
|
2006 |
Kevei E, Gyula P, Hall A, Kozma-Bognár L, Kim WY, Eriksson ME, Tóth R, Hanano S, Fehér B, Southern MM, Bastow RM, Viczián A, Hibberd V, Davis SJ, Somers DE, et al. Forward genetic analysis of the circadian clock separates the multiple functions of ZEITLUPE. Plant Physiology. 140: 933-45. PMID 16428597 DOI: 10.1104/Pp.105.074864 |
0.748 |
|
2005 |
Dodd AN, Salathia N, Hall A, Kévei E, Tóth R, Nagy F, Hibberd JM, Millar AJ, Webb AA. Plant circadian clocks increase photosynthesis, growth, survival, and competitive advantage. Science (New York, N.Y.). 309: 630-3. PMID 16040710 DOI: 10.1126/Science.1115581 |
0.831 |
|
2003 |
Hall A, Bastow RM, Davis SJ, Hanano S, McWatters HG, Hibberd V, Doyle MR, Sung S, Halliday KJ, Amasino RM, Millar AJ. The TIME FOR COFFEE gene maintains the amplitude and timing of Arabidopsis circadian clocks. The Plant Cell. 15: 2719-29. PMID 14555691 DOI: 10.1105/Tpc.013730 |
0.851 |
|
2003 |
Eriksson ME, Hanano S, Southern MM, Hall A, Millar AJ. Response regulator homologues have complementary, light-dependent functions in the Arabidopsis circadian clock. Planta. 218: 159-62. PMID 12955513 DOI: 10.1007/S00425-003-1106-4 |
0.837 |
|
2002 |
Hall A, Kozma-Bognár L, Bastow RM, Nagy F, Millar AJ. Distinct regulation of CAB and PHYB gene expression by similar circadian clocks. The Plant Journal : For Cell and Molecular Biology. 32: 529-37. PMID 12445124 DOI: 10.1046/J.1365-313X.2002.01441.X |
0.835 |
|
2001 |
Tóth R, Kevei E, Hall A, Millar AJ, Nagy F, Kozma-Bognár L. Circadian clock-regulated expression of phytochrome and cryptochrome genes in Arabidopsis. Plant Physiology. 127: 1607-16. PMID 11743105 DOI: 10.1104/Pp.010467 |
0.847 |
|
2001 |
McWatters HG, Bastow RM, Hall A, Millar AJ. The ELF3 zeitnehmer regulates light signalling to the circadian clock. Nature. 408: 716-20. PMID 11130072 DOI: 10.1038/35047079 |
0.849 |
|
2001 |
Thain SC, Hall A, Millar AJ. Functional independence of circadian clocks that regulate plant gene expression. Current Biology : Cb. 10: 951-6. PMID 10985381 DOI: 10.1016/S0960-9822(00)00630-8 |
0.741 |
|
2001 |
Hall A, Kozma-Bognár L, Tóth R, Nagy F, Millar AJ. Conditional Circadian Regulation of PHYTOCHROME AGene Expression Plant Physiology. 127: 1808-1818. DOI: 10.1104/Pp.010294 |
0.828 |
|
1999 |
Bognár LK, Hall A, Adám E, Thain SC, Nagy F, Millar AJ. The circadian clock controls the expression pattern of the circadian input photoreceptor, phytochrome B. Proceedings of the National Academy of Sciences of the United States of America. 96: 14652-7. PMID 10588760 DOI: 10.1073/Pnas.96.25.14652 |
0.768 |
|
Show low-probability matches. |