Sean R. Connolly, Ph.D. - Publications

Affiliations: 
James Cook University 

117 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Bairos-Novak KR, Hoogenboom MO, van Oppen MJH, Connolly SR. Coral adaptation to climate change: Meta-analysis reveals high heritability across multiple traits. Global Change Biology. PMID 34482591 DOI: 10.1111/gcb.15829  1
2021 Dietzel A, Connolly SR, Hughes TP, Bode M. The spatial footprint and patchiness of large-scale disturbances on coral reefs. Global Change Biology. PMID 34390297 DOI: 10.1111/gcb.15805  1
2021 Dietzel A, Bode M, Connolly SR, Hughes TP. Author Correction: The population sizes and global extinction risk of reef-building coral species at biogeographic scales. Nature Ecology & Evolution. PMID 33727683 DOI: 10.1038/s41559-021-01441-z  1
2021 Dietzel A, Bode M, Connolly SR, Hughes TP. The population sizes and global extinction risk of reef-building coral species at biogeographic scales. Nature Ecology & Evolution. PMID 33649542 DOI: 10.1038/s41559-021-01393-4  1
2021 Baird AH, Guest JR, Edwards AJ, Bauman AG, Bouwmeester J, Mera H, Abrego D, Alvarez-Noriega M, Babcock RC, Barbosa MB, Bonito V, Burt J, Cabaitan PC, Chang CF, Chavanich S, ... ... Connolly SR, et al. An Indo-Pacific coral spawning database. Scientific Data. 8: 35. PMID 33514754 DOI: 10.1038/s41597-020-00793-8  1
2020 Dietzel A, Bode M, Connolly SR, Hughes TP. Long-term shifts in the colony size structure of coral populations along the Great Barrier Reef. Proceedings. Biological Sciences. 287: 20201432. PMID 33049171 DOI: 10.1098/rspb.2020.1432  1
2020 Madin JS, Baird AH, Baskett ML, Connolly SR, Dornelas MA. Partitioning colony size variation into growth and partial mortality. Biology Letters. 16: 20190727. PMID 31964264 DOI: 10.1098/Rsbl.2019.0727  1
2019 Morais RA, Connolly SR, Bellwood DR. Human exploitation shapes productivity-biomass relationships on coral reefs. Global Change Biology. PMID 31782858 DOI: 10.1111/Gcb.14941  1
2019 Thibaut LM, Connolly SR. Hierarchical modeling strengthens evidence for density-dependence in observational time series of population dynamics. Ecology. PMID 31529700 DOI: 10.1002/Ecy.2893  1
2019 Moneghetti J, Figueiredo J, Baird AH, Connolly SR. High-frequency sampling and piecewise models reshape dispersal kernels of a common reef coral. Ecology. e02730. PMID 30991454 DOI: 10.1002/Ecy.2730  1
2019 Hopf JK, Jones GP, Williamson DH, Connolly SR. Marine reserves stabilize fish populations and fisheries yields in disturbed coral reef systems. Ecological Applications : a Publication of the Ecological Society of America. e01905. PMID 30985954 DOI: 10.1002/Eap.1905  1
2019 Hughes TP, Kerry JT, Baird AH, Connolly SR, Chase TJ, Dietzel A, Hill T, Hoey AS, Hoogenboom MO, Jacobson M, Kerswell A, Madin JS, Mieog A, Paley AS, Pratchett MS, et al. Global warming impairs stock-recruitment dynamics of corals. Nature. PMID 30944475 DOI: 10.1038/S41586-019-1081-Y  1
2019 Crandall ED, Riginos C, Bird CE, Liggins L, Treml E, Beger M, Barber PH, Connolly SR, Cowman PF, DiBattista JD, Eble JA, Magnuson SF, Horne JB, Kochzius M, Lessios HA, et al. The molecular biogeography of the Indo-Pacific: testing hypotheses with multispecies genetic patterns Global Ecology and Biogeography. 28: 943-960. DOI: 10.1111/Geb.12905  1
2018 Hughes TP, Kerry JT, Baird AH, Connolly SR, Dietzel A, Eakin CM, Heron SF, Hoey AS, Hoogenboom MO, Liu G, McWilliam MJ, Pears RJ, Pratchett MS, Skirving WJ, Stella JS, et al. Global warming transforms coral reef assemblages. Nature. PMID 29670282 DOI: 10.1038/S41586-018-0041-2  1
2018 Álvarez-Noriega M, Baird AH, Dornelas M, Madin JS, Connolly SR. Negligible effect of competition on coral colony growth. Ecology. PMID 29569234 DOI: 10.1002/Ecy.2222  1
2018 Zamborain-Mason J, Russ GR, Abesamis RA, Bucol AA, Connolly SR. Node self-connections and metapopulation persistence: reply to Saura (2018). Ecology Letters. PMID 29460504 DOI: 10.1111/Ele.12924  1
2018 Hughes TP, Anderson KD, Connolly SR, Heron SF, Kerry JT, Lough JM, Baird AH, Baum JK, Berumen ML, Bridge TC, Claar DC, Eakin CM, Gilmour JP, Graham NAJ, Harrison H, et al. Spatial and temporal patterns of mass bleaching of corals in the Anthropocene. Science (New York, N.Y.). 359: 80-83. PMID 29302011 DOI: 10.1126/Science.Aan8048  1
2017 Connolly SR, Keith SA, Colwell RK, Rahbek C. Mechanism, Process, and Causation in Ecological Models: A Reply to McGill and Potochnik. Trends in Ecology & Evolution. PMID 29279296 DOI: 10.1016/J.Tree.2017.11.009  1
2017 Madin JS, Anderson KD, Andreasen MH, Bridge TCL, Cairns SD, Connolly SR, Darling ES, Diaz M, Falster DS, Franklin EC, Gates RD, Harmer AMT, Hoogenboom MO, Huang D, Keith SA, et al. Corrigendum: The Coral Trait Database, a curated database of trait information for coral species from the global oceans. Scientific Data. 4: 170174. PMID 29206222 DOI: 10.1038/Sdata.2017.174  1
2017 Connolly SR, Keith SA, Colwell RK, Rahbek C. Process, Mechanism, and Modeling in Macroecology. Trends in Ecology & Evolution. PMID 28919203 DOI: 10.1016/J.Tree.2017.08.011  1
2017 Blowes SA, Pratchett MS, Connolly SR. Aggression, interference, and the functional response of coral-feeding butterflyfishes. Oecologia. PMID 28669003 DOI: 10.1007/S00442-017-3902-8  1
2017 Zamborain-Mason J, Russ GR, Abesamis RA, Bucol AA, Connolly SR. Network theory and metapopulation persistence: incorporating node self-connections. Ecology Letters. PMID 28612393 DOI: 10.1111/Ele.12784  1
2017 Dornelas M, Madin JS, Baird AH, Connolly SR. Allometric growth in reef-building corals. Proceedings. Biological Sciences. 284. PMID 28330923 DOI: 10.1098/Rspb.2017.0053  1
2017 Hughes TP, Kerry JT, Álvarez-Noriega M, Álvarez-Romero JG, Anderson KD, Baird AH, Babcock RC, Beger M, Bellwood DR, Berkelmans R, Bridge TC, Butler IR, Byrne M, Cantin NE, Comeau S, ... Connolly SR, et al. Global warming and recurrent mass bleaching of corals. Nature. 543: 373-377. PMID 28300113 DOI: 10.1038/Nature21707  1
2017 Connolly SR, Hughes TP, Bellwood DR. A unified model explains commonness and rarity on coral reefs. Ecology Letters. PMID 28251798 DOI: 10.1111/Ele.12751  1
2016 Álvarez-Noriega M, Baird AH, Dornelas M, Madin JS, Cumbo VR, Connolly SR. Fecundity and the demographic strategies of coral morphologies. Ecology. 97: 3485-3493. PMID 27912010 DOI: 10.1002/Ecy.1588  1
2016 Casey JM, Baird AH, Brandl SJ, Hoogenboom MO, Rizzari JR, Frisch AJ, Mirbach CE, Connolly SR. A test of trophic cascade theory: fish and benthic assemblages across a predator density gradient on coral reefs. Oecologia. PMID 27744581 DOI: 10.1007/S00442-016-3753-8  1
2016 Hopf JK, Jones GP, Williamson DH, Connolly SR. Fishery consequences of marine reserves: short-term pain for longer-term gain. Ecological Applications : a Publication of the Ecological Society of America. 26: 818-29. PMID 27411253 DOI: 10.1890/15-0348  1
2016 Malerba ME, Heimann K, Connolly SR. Improving dynamic phytoplankton reserve-utilization models with an indirect proxy for internal nitrogen. Journal of Theoretical Biology. PMID 27216639 DOI: 10.1016/J.Jtbi.2016.05.023  1
2016 Hughes TP, Cameron DS, Chin A, Connolly SR, Day JC, Jones GP, McCook L, McGinnity P, Mumby PJ, Pears RJ, Pressey RL, Russ GR, Tanzer J, Tobin A, Young MA. A critique of claims for negative impacts of Marine Protected Areas on fisheries. Ecological Applications : a Publication of the Ecological Society of America. 26: 637-41. PMID 27209801 DOI: 10.1890/15-0457  1
2016 Hopf JK, Jones GP, Williamson DH, Connolly SR. Synergistic Effects of Marine Reserves and Harvest Controls on the Abundance and Catch Dynamics of a Coral Reef Fishery. Current Biology : Cb. PMID 27185553 DOI: 10.1016/J.Cub.2016.04.022  1
2016 Madin JS, Anderson KD, Andreasen MH, Bridge TC, Cairns SD, Connolly SR, Darling ES, Diaz M, Falster DS, Franklin EC, Gates RD, Hoogenboom MO, Huang D, Keith SA, Kosnik MA, et al. The Coral Trait Database, a curated database of trait information for coral species from the global oceans. Scientific Data. 3: 160017. PMID 27023900 DOI: 10.1038/Sdata.2016.17  1
2016 Madin JS, Hoogenboom MO, Connolly SR, Darling ES, Falster DS, Huang D, Keith SA, Mizerek T, Pandolfi JM, Putnam HM, Baird AH. A Trait-Based Approach to Advance Coral Reef Science. Trends in Ecology & Evolution. PMID 26969335 DOI: 10.1016/J.Tree.2016.02.012  1
2015 Casey JM, Connolly SR, Ainsworth TD. Coral transplantation triggers shift in microbiome and promotion of coral disease associated potential pathogens. Scientific Reports. 5: 11903. PMID 26144865 DOI: 10.1038/Srep11903  1
2015 Mokany K, Ferrier S, Connolly SR, Dunstan PK, Fulton EA, Harfoot MB, Harwood TD, Richardson AJ, Roxburgh SH, Scharlemann JPW, Tittensor DP, Westcott DA, Wintle BA. Integrating modelling of biodiversity composition and ecosystem function Oikos. DOI: 10.1111/Oik.02792  1
2015 Freilich MA, Connolly SR. Phylogenetic community structure when competition and environmental filtering determine abundances Global Ecology and Biogeography. 24: 1390-1400. DOI: 10.1111/Geb.12367  1
2015 MacNeil MA, Connolly SR. Multi-scale patterns and processes in reef fish abundance Ecology of Fishes On Coral Reefs. 116-124. DOI: 10.1017/CBO9781316105412.014  1
2015 Malerba ME, Connolly SR, Heimann K. An experimentally validated nitrate-ammonium-phytoplankton model including effects of starvation length and ammonium inhibition on nitrate uptake Ecological Modelling. 317: 30-40. DOI: 10.1016/J.Ecolmodel.2015.08.024  1
2015 Malerba ME, Connolly SR, Heimann K. Standard flow cytometry as a rapid and non-destructive proxy for cell nitrogen quota Journal of Applied Phycology. DOI: 10.1007/S10811-015-0642-1  1
2014 Hughes TP, Bellwood DR, Connolly SR, Cornell HV, Karlson RH. Double jeopardy and global extinction risk in corals and reef fishes. Current Biology : Cb. 24: 2946-51. PMID 25454782 DOI: 10.1016/J.Cub.2014.10.037  1
2014 Casey JM, Ainsworth TD, Choat JH, Connolly SR. Farming behaviour of reef fishes increases the prevalence of coral disease associated microbes and black band disease. Proceedings. Biological Sciences / the Royal Society. 281: 20141032. PMID 24966320 DOI: 10.1098/Rspb.2014.1032  1
2014 Connolly SR, MacNeil MA, Caley MJ, Knowlton N, Cripps E, Hisano M, Thibaut LM, Bhattacharya BD, Benedetti-Cecchi L, Brainard RE, Brandt A, Bulleri F, Ellingsen KE, Kaiser S, Kröncke I, et al. Commonness and rarity in the marine biosphere. Proceedings of the National Academy of Sciences of the United States of America. 111: 8524-9. PMID 24912168 DOI: 10.1073/Pnas.1406664111  1
2014 Madin JS, Baird AH, Dornelas M, Connolly SR. Mechanical vulnerability explains size-dependent mortality of reef corals. Ecology Letters. 17: 1008-15. PMID 24894390 DOI: 10.1111/Ele.12306  1
2014 Ban SS, Graham NA, Connolly SR. Evidence for multiple stressor interactions and effects on coral reefs. Global Change Biology. 20: 681-97. PMID 24166756 DOI: 10.1111/Gcb.12453  1
2014 Keith SA, Kerswell AP, Connolly SR. Global diversity of marine macroalgae: Environmental conditions explain less variation in the tropics Global Ecology and Biogeography. 23: 517-529. DOI: 10.1111/Geb.12132  1
2014 Figueiredo J, Baird AH, Harii S, Connolly SR. Increased local retention of reef coral larvae as a result of ocean warming Nature Climate Change. 4: 498-502. DOI: 10.1038/Nclimate2210  1
2014 Rizzari JR, Frisch AJ, Connolly SR. How robust are estimates of coral reef shark depletion? Biological Conservation. 176: 39-47. DOI: 10.1016/J.Biocon.2014.05.003  1
2014 Casey JM, Choat JH, Connolly SR. Coupled dynamics of territorial damselfishes and juvenile corals on the reef crest Coral Reefs. DOI: 10.1007/S00338-014-1221-7  1
2013 Blowes SA, Pratchett MS, Connolly SR. Heterospecific aggression and dominance in a guild of coral-feeding fishes: the roles of dietary ecology and phylogeny. The American Naturalist. 182: 157-68. PMID 23852351 DOI: 10.1086/670821  1
2013 Keith SA, Baird AH, Hughes TP, Madin JS, Connolly SR. Faunal breaks and species composition of Indo-Pacific corals: the role of plate tectonics, environment and habitat distribution. Proceedings. Biological Sciences / the Royal Society. 280: 20130818. PMID 23698011 DOI: 10.1098/Rspb.2013.0818  1
2013 Figueiredo J, Baird AH, Connolly SR. Synthesizing larval competence dynamics and reef-scale retention reveals a high potential for self-recruitment in corals. Ecology. 94: 650-9. PMID 23687891 DOI: 10.1890/12-0767.1  1
2013 Graham EM, Baird AH, Willis BL, Connolly SR. Effects of delayed settlement on post-settlement growth and survival of scleractinian coral larvae. Oecologia. 173: 431-8. PMID 23525803 DOI: 10.1007/S00442-013-2635-6  1
2013 Chan NC, Connolly SR. Sensitivity of coral calcification to ocean acidification: a meta-analysis. Global Change Biology. 19: 282-90. PMID 23504739 DOI: 10.1111/Gcb.12011  1
2013 Thibaut LM, Connolly SR. Understanding diversity-stability relationships: towards a unified model of portfolio effects. Ecology Letters. 16: 140-50. PMID 23095077 DOI: 10.1111/Ele.12019  1
2013 Keith SA, Connolly SR. Effects of diversity-dependent colonization-extinction dynamics on the mid-domain effect Global Ecology and Biogeography. 22: 773-783. DOI: 10.1111/Geb.12035  1
2013 Graham EM, Baird AH, Connolly SR, Sewell MA, Willis BL. Rapid declines in metabolism explain extended coral larval longevity Coral Reefs. 32: 539-549. DOI: 10.1007/S00338-012-0999-4  1
2013 Ban SS, Graham NAJ, Connolly SR. Relationships between temperature, bleaching and white syndrome on the Great Barrier Reef Coral Reefs. 32: 1-12. DOI: 10.1007/S00338-012-0944-6  1
2012 Bode M, Connolly SR, Pandolfi JM. Species differences drive nonneutral structure in pleistocene coral communities. The American Naturalist. 180: 577-88. PMID 23070319 DOI: 10.1086/667892  1
2012 Madin JS, Hughes TP, Connolly SR. Calcification, storm damage and population resilience of tabular corals under climate change. Plos One. 7: e46637. PMID 23056379 DOI: 10.1371/Journal.Pone.0046637  1
2012 Barbosa M, Connolly SR, Hisano M, Dornelas M, Magurran AE. Fitness consequences of female multiple mating: a direct test of indirect benefits. Bmc Evolutionary Biology. 12: 185. PMID 22978442 DOI: 10.1186/1471-2148-12-185  1
2012 Keith SA, Webb TJ, Böhning-Gaese K, Connolly SR, Dulvy NK, Eigenbrod F, Jones KE, Price T, Redding DW, Owens IP, Isaac NJ. What is macroecology? Biology Letters. 8: 904-6. PMID 22915630 DOI: 10.1098/Rsbl.2012.0672  1
2012 Thibaut LM, Connolly SR, Sweatman HP. Diversity and stability of herbivorous fishes on coral reefs. Ecology. 93: 891-901. PMID 22690639 DOI: 10.1890/11-1753.1  1
2012 Chan NC, Connolly SR, Mapstone BD. Effects of sex change on the implications of marine reserves for fisheries. Ecological Applications : a Publication of the Ecological Society of America. 22: 778-91. PMID 22645810 DOI: 10.1890/11-0036.1  1
2012 Blowes SA, Connolly SR. Risk spreading, connectivity, and optimal reserve spacing. Ecological Applications : a Publication of the Ecological Society of America. 22: 311-21. PMID 22471092 DOI: 10.1890/11-0952.1  1
2012 Madin JS, Hoogenboom MO, Connolly SR. Integrating physiological and biomechanical drivers of population growth over environmental gradients on coral reefs. The Journal of Experimental Biology. 215: 968-76. PMID 22357590 DOI: 10.1242/Jeb.061002  1
2012 Hobbs JPA, Jones GP, Munday PL, Connolly SR, Srinivasan M. Biogeography and the structure of coral reef fish communities on isolated islands Journal of Biogeography. 39: 130-139. DOI: 10.1111/J.1365-2699.2011.02576.X  1
2012 Connolly SR, Thibaut LM. A comparative analysis of alternative approaches to fitting species-abundance models Journal of Plant Ecology. 5: 32-45. DOI: 10.1093/Jpe/Rtr043  1
2012 Figueiredo J, Connolly SR. Dispersal-mediated coexistence under recruitment limitation and displacement competition Ecological Modelling. 243: 133-142. DOI: 10.1016/J.Ecolmodel.2012.06.023  1
2012 Connolly SR, Lopez-Yglesias MA, Anthony KRN. Food availability promotes rapid recovery from thermal stress in a scleractinian coral Coral Reefs. 31: 951-960. DOI: 10.1007/S00338-012-0925-9  1
2011 Hisano M, Connolly SR, Robbins WD. Population growth rates of reef sharks with and without fishing on the great barrier reef: robust estimation with multiple models. Plos One. 6: e25028. PMID 21966402 DOI: 10.1371/Journal.Pone.0025028  1
2011 Karlson RH, Connolly SR, Hughes TP. Spatial variance in abundance and occupancy of corals across broad geographic scales. Ecology. 92: 1282-91. PMID 21797156 DOI: 10.1890/10-0619.1  1
2011 Pandolfi JM, Connolly SR, Marshall DJ, Cohen AL. Projecting coral reef futures under global warming and ocean acidification. Science (New York, N.Y.). 333: 418-22. PMID 21778392 DOI: 10.1126/Science.1204794  1
2011 Hoogenboom MO, Connolly SR, Anthony KRN. Biotic and abiotic correlates of tissue quality for common scleractinian corals Marine Ecology Progress Series. 438: 119-128. DOI: 10.3354/Meps09271  1
2011 Pandolfi JM, Connolly SR, Marshall DJ, Cohen AL. Response Science. 334: 1495-1496. DOI: 10.1126/Science.334.6062.1495  1
2011 Cetina-Heredia P, Connolly SR. A simple approximation for larval retention around reefs Coral Reefs. 30: 593-605. DOI: 10.1007/S00338-011-0749-Z  1
2010 Connolly SR, Baird AH. Estimating dispersal potential for marine larvae: dynamic models applied to scleractinian corals. Ecology. 91: 3572-83. PMID 21302829 DOI: 10.1890/10-0143.1  1
2010 Salomon Y, Connolly SR, Bode L. Effects of asymmetric dispersal on the coexistence of competing species. Ecology Letters. 13: 432-41. PMID 20100238 DOI: 10.1111/J.1461-0248.2009.01436.X  1
2010 Penin L, Michonneau F, Baird AH, Connolly SR, Pratchett MS, Kayal M, Adjeroud M. Early post-settlement mortality and the structure of coral assemblages Marine Ecology Progress Series. 408: 55-64. DOI: 10.3354/Meps08554  1
2009 Connolly SR, Dornelas M, Bellwood DR, Hughes TP. Testing species abundance models: a new bootstrap approach applied to Indo-Pacific coral reefs. Ecology. 90: 3138-49. PMID 19967869 DOI: 10.1890/08-1832.1  1
2009 Gotelli NJ, Anderson MJ, Arita HT, Chao A, Colwell RK, Connolly SR, Currie DJ, Dunn RR, Graves GR, Green JL, Grytnes JA, Jiang YH, Jetz W, Kathleen Lyons S, McCain CM, et al. Patterns and causes of species richness: a general simulation model for macroecology. Ecology Letters. 12: 873-86. PMID 19702748 DOI: 10.1111/J.1461-0248.2009.01353.X  1
2009 Hoogenboom MO, Connolly SR. Defining fundamental niche dimensions of corals: synergistic effects of colony size, light, and flow. Ecology. 90: 767-80. PMID 19341146 DOI: 10.1890/07-2010.1  1
2009 Elmhirst T, Connolly SR, Hughes TP. Connectivity, regime shifts and the resilience of coral reefs Coral Reefs. 28: 949-957. DOI: 10.1007/S00338-009-0530-8  1
2009 Almany GR, Connolly SR, Heath DD, Hogan JD, Jones GP, McCook LJ, Mills M, Pressey RL, Williamson DH. Connectivity, biodiversity conservation and the design of marine reserve networks for coral reefs Coral Reefs. 28: 339-351. DOI: 10.1007/S00338-009-0484-X  1
2009 Hoogenboom MO, Connolly SR, Anthony KRN. Effects of photoacclimation on the light niche of corals: A process-based approach Marine Biology. 156: 2493-2503. DOI: 10.1007/S00227-009-1274-2  1
2008 Belmaker J, Ziv Y, Shashar N, Connolly SR. Regional variation in the hierarchical partitioning of diversity in coral-dwelling fishes. Ecology. 89: 2829-40. PMID 18959320 DOI: 10.1890/07-1464.1  1
2008 Madin JS, O'Donnell MJ, Connolly SR. Climate-mediated mechanical changes to post-disturbance coral assemblages. Biology Letters. 4: 490-3. PMID 18628114 DOI: 10.1098/Rsbl.2008.0249  1
2008 Dornelas M, Connolly SR. Multiple modes in a coral species abundance distribution. Ecology Letters. 11: 1008-16. PMID 18616549 DOI: 10.1111/J.1461-0248.2008.01208.X  1
2008 Hoogenboom MO, Connolly SR, Anthony KR. Interactions between morphological and physiological plasticity optimize energy acquisition in corals. Ecology. 89: 1144-54. PMID 18481538 DOI: 10.1890/07-1272.1  1
2008 Graham EM, Baird AH, Connolly SR. Survival dynamics of scleractinian coral larvae and implications for dispersal Coral Reefs. 27: 529-539. DOI: 10.1007/S00338-008-0361-Z  1
2007 Anthony KRN, Connolly SR, Hoegh-Guldberg O. Bleaching, energetics, and coral mortality risk: Effects of temperature, light, and sediment regime Limnology and Oceanography. 52: 716-726. DOI: 10.4319/Lo.2007.52.2.0716  1
2006 Robbins WD, Hisano M, Connolly SR, Choat JH. Ongoing collapse of coral-reef shark populations. Current Biology : Cb. 16: 2314-9. PMID 17141612 DOI: 10.1016/J.Cub.2006.09.044  1
2006 Madin JS, Connolly SR. Ecological consequences of major hydrodynamic disturbances on coral reefs. Nature. 444: 477-80. PMID 17122855 DOI: 10.1038/Nature05328  1
2006 Dornelas M, Connolly SR, Hughes TP. Coral reef diversity refutes the neutral theory of biodiversity. Nature. 440: 80-2. PMID 16511493 DOI: 10.1038/Nature04534  1
2006 Hoogenboom MO, Anthony KRN, Connolly SR. Energetic cost of photoinhibition in corals Marine Ecology Progress Series. 313: 1-12. DOI: 10.3354/Meps313001  1
2006 Dornelas M, Connolly SR, Hughes TP. Erratum: Coral reef diversity refutes the neutral theory of biodiversity Nature. 443: 598-598. DOI: 10.1038/Nature05187  1
2006 Madin JS, Black KP, Connolly SR. Scaling water motion on coral reefs: From regional to organismal scales Coral Reefs. 25: 635-644. DOI: 10.1007/S00338-006-0137-2  1
2005 Connolly SR, Hughes TP, Bellwood DR, Karlson RH. Community structure of corals and reef fishes at multiple scales. Science (New York, N.Y.). 309: 1363-5. PMID 16123298 DOI: 10.1126/Science.1113281  1
2005 Connolly SR. Process-based models of species distributions and the mid-domain effect. The American Naturalist. 166: 1-11. PMID 15937785 DOI: 10.1086/430638  1
2005 Bellwood DR, Hughes TP, Connolly SR, Tanner J. Environmental and geometric constraints on Indo-Pacific coral reef biodiversity Ecology Letters. 8: 643-651. DOI: 10.1111/J.1461-0248.2005.00763.X  1
2005 Anthony KRN, Hoogenboom MO, Connolly SR. Adaptive variation in coral geometry and the optimization of internal colony light climates Functional Ecology. 19: 17-26. DOI: 10.1111/J.0269-8463.2005.00925.X  1
2004 Anthony KR, Connolly SR. Environmental limits to growth: physiological niche boundaries of corals along turbidity-light gradients. Oecologia. 141: 373-84. PMID 15322896 DOI: 10.1007/S00442-004-1647-7  1
2003 Aronson RB, Bruno JF, Precht WF, Glynn PW, Harvell CD, Kaufman L, Rogers CS, Shinn EA, Valentine JF. Causes of coral reef degradation. Science (New York, N.Y.). 302: 1502-4; author reply. PMID 14645826 DOI: 10.1126/Science.302.5650.1502B  1
2003 Hughes TP, Baird AH, Bellwood DR, Card M, Connolly SR, Folke C, Grosberg R, Hoegh-Guldberg O, Jackson JB, Kleypas J, Lough JM, Marshall P, Nyström M, Palumbi SR, Pandolfi JM, et al. Climate change, human impacts, and the resilience of coral reefs. Science (New York, N.Y.). 301: 929-33. PMID 12920289 DOI: 10.1126/Science.1085046  1
2003 Connolly SR, Muko S. Space preemption, size-dependent competition, and the coexistence of clonal growth forms Ecology. 84: 2979-2988. DOI: 10.1890/02-0347  1
2003 Connolly SR, Bellwood DR, Hughes TP. Indo‐Pacific Biodiversity Of Coral Reefs: Deviations From A Mid‐Domain Model Ecology. 84: 2178-2190. DOI: 10.1890/02-0254  1
2003 Connolly SR, Bellwood DR, Hughes TP. Indo-pacific biodiversity of coral reefs: Deviations from a mid-domain model Ecology. 84: 2178-2190.  1
2002 Anthony KRN, Connolly SR, Willis BL. Comparative analysis of energy allocation to tissue and skeletal growth in corals Limnology and Oceanography. 47: 1417-1429. DOI: 10.4319/Lo.2002.47.5.1417  1
2002 Connolly SR, Miller AI. Global Ordovician faunal transitions in the marine benthos: Ultimate causes Paleobiology. 28: 26-40. DOI: 10.1666/0094-8373(2002)028<0026:Goftit>2.0.Co;2  1
2002 Hughes TP, Bellwood DR, Connolly SR. Biodiversity hotspots, centres of endemicity, and the conservation of coral reefs Ecology Letters. 5: 775-784. DOI: 10.1046/J.1461-0248.2002.00383.X  1
2001 Connolly SR, Menge BA, Roughgarden J. A latitudinal gradient in recruitment of intertidal invertebrates in the northeast Pacific Ocean Ecology. 82: 1799-1813. DOI: 10.1890/0012-9658(2001)082[1799:Algiro]2.0.Co;2  1
2001 Miller AI, Connolly SR. Substrate affinities of higher taxa and the Ordovician Radiation Paleobiology. 27: 768-778. DOI: 10.1666/0094-8373(2001)027<0768:Saohta>2.0.Co;2  1
2001 Connolly SR, Miller AI. Joint estimation of sampling and turnover rates from fossil databases: Capture-mark-recapture methods revisited Paleobiology. 27: 751-767. DOI: 10.1666/0094-8373(2001)027<0751:Jeosat>2.0.Co;2  1
2001 Connolly SR, Miller AI. Global Ordovician faunal transitions in the marine benthos: Proximate causes Paleobiology. 27: 779-795.  1
1999 Connolly SR, Roughgarden J. Increased recruitment of northeast Pacific barnacles during the 1997 El Nino Limnology and Oceanography. 44: 466-469. DOI: 10.4319/Lo.1999.44.2.0466  1
1999 Connolly SR, Roughgarden J. Theory of marine communities: Competition, predation, and recruitment-dependent interaction strength Ecological Monographs. 69: 277-296. DOI: 10.1890/0012-9615(1999)069[0277:Tomccp]2.0.Co;2  1
1998 Connolly SR, Roughgarden J. A latitudinal gradient in northeast Pacific intertidal community structure: evidence for an oceanographically based synthesis of marine community theory. The American Naturalist. 151: 311-26. PMID 18811323 DOI: 10.1086/286121  1
1998 Connolly SR, Roughgarden J. A range extension for the volcano barnacle, tetraclita rubescens California Fish and Game. 84: 182-183.  1
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