| Year |
Citation |
Score |
| 2024 |
Poikela N, Laetsch DR, Hoikkala V, Lohse K, Kankare M. Chromosomal Inversions and the Demography of Speciation in Drosophila montana and Drosophila flavomontana. Genome Biology and Evolution. 16. PMID 38482698 DOI: 10.1093/gbe/evae024 |
0.766 |
|
| 2023 |
Lohse K, Hayward A, Laetsch DR, Marques V, Vila R, Tyler-Smith C. The genome sequence of the Mazarine Blue, (Rottemburg, 1775). Wellcome Open Research. 8: 181. PMID 38779052 DOI: 10.12688/wellcomeopenres.19362.1 |
0.468 |
|
| 2023 |
Hayward A, Lohse K, Vila R, Laetsch DR, Hedlund JSU. The genome sequence of the Brown Argus, (Denis & Schiffermüller, 1775). Wellcome Open Research. 8: 336. PMID 38404635 DOI: 10.12688/wellcomeopenres.19784.1 |
0.777 |
|
| 2023 |
Laetsch DR, Bisschop G, Martin SH, Aeschbacher S, Setter D, Lohse K. Demographically explicit scans for barriers to gene flow using gIMble. Plos Genetics. 19: e1010999. PMID 37816069 DOI: 10.1371/journal.pgen.1010999 |
0.767 |
|
| 2023 |
Mackintosh A, Vila R, Martin SH, Setter D, Lohse K. Do chromosome rearrangements fix by genetic drift or natural selection? Insights from Brenthis butterflies. Molecular Ecology. PMID 37807966 DOI: 10.1111/mec.17146 |
0.437 |
|
| 2023 |
Lohse K, Hayward A, Vila R, Carvalho APS, Kawahara AY. The genome sequence of the Large Skipper, , (Esper, 1777). Wellcome Open Research. 8: 75. PMID 37600586 DOI: 10.12688/wellcomeopenres.18788.1 |
0.47 |
|
| 2023 |
Mackintosh A, Vila R, Laetsch DR, Hayward A, Martin SH, Lohse K. Chromosome fissions and fusions act as barriers to gene flow between Brenthis fritillary butterflies. Molecular Biology and Evolution. PMID 36810615 DOI: 10.1093/molbev/msad043 |
0.777 |
|
| 2022 |
Vila R, Lohse K, Hayward A, Laetsch DR, Wahlberg N. The genome sequence of the white admiral, (Linnaeus, 1764). Wellcome Open Research. 7: 301. PMID 37781634 DOI: 10.12688/wellcomeopenres.18594.1 |
0.776 |
|
| 2022 |
Ebdon S, Lohse K, Jansen Van Rensburg A. The genome sequence of the northern brown argus, (Fabricius, 1793). Wellcome Open Research. 7: 314. PMID 37389324 DOI: 10.12688/wellcomeopenres.18664.1 |
0.472 |
|
| 2022 |
Lohse K, Hayward A, Laetsch DR, Vila R, Lucek K. The genome sequence of the Arran brown, (Linnaeus, 1758). Wellcome Open Research. 7: 259. PMID 37346774 DOI: 10.12688/wellcomeopenres.18115.1 |
0.772 |
|
| 2022 |
Lohse K, Vila R, Hayward A, Laetsch DR, Wahlberg N. The genome sequence of the high brown fritillary, (Dennis & Schiffermüller, 1775). Wellcome Open Research. 7: 298. PMID 37224319 DOI: 10.12688/wellcomeopenres.18569.1 |
0.776 |
|
| 2022 |
Lohse K, Hayward A, Vila R, Howe C. The genome sequence of the Adonis blue, (Rottemburg, 1775). Wellcome Open Research. 7: 255. PMID 37065725 DOI: 10.12688/wellcomeopenres.18330.1 |
0.468 |
|
| 2022 |
Lohse K, Höök L, Näsvall K, Backström N. The genome sequence of the wood white butterfly, (Linnaeus, 1758). Wellcome Open Research. 7: 254. PMID 37025368 DOI: 10.12688/wellcomeopenres.18118.1 |
0.461 |
|
| 2022 |
Hayward A, Lohse K, Laetsch DR, Vila R, Taluy E. The genome sequence of the silver-studded blue, (Linnaeus, 1758). Wellcome Open Research. 7: 315. PMID 36874580 DOI: 10.12688/wellcomeopenres.18607.1 |
0.775 |
|
| 2022 |
Vila R, Lohse K, Hayward A, Laetsch D. The genome sequence of the marbled white butterfly, (Linnaeus, 1758). Wellcome Open Research. 7: 123. PMID 36874572 DOI: 10.12688/wellcomeopenres.17807.1 |
0.445 |
|
| 2022 |
Lohse K, Wright C. The genome sequence of the wall brown, (Linnaeus, 1767). Wellcome Open Research. 7: 230. PMID 36865373 DOI: 10.12688/wellcomeopenres.18106.1 |
0.451 |
|
| 2022 |
Lohse K, Setter D. The genome sequence of the small pearl-bordered fritillary butterfly, (Schiffermüller, 1775). Wellcome Open Research. 7: 76. PMID 36507315 DOI: 10.12688/wellcomeopenres.17734.1 |
0.452 |
|
| 2022 |
Poikela N, Laetsch DR, Kankare M, Hoikkala A, Lohse K. Experimental introgression in Drosophila: Asymmetric postzygotic isolation associated with chromosomal inversions and an incompatibility locus on the X chromosome. Molecular Ecology. PMID 36461113 DOI: 10.1111/mec.16803 |
0.74 |
|
| 2022 |
Ebdon S, Bisschop G, Lohse K, Saccheri I, Davies J. The genome sequence of the orange-tip butterfly, (Linnaeus, 1758). Wellcome Open Research. 7: 260. PMID 36408293 DOI: 10.12688/wellcomeopenres.18117.1 |
0.463 |
|
| 2022 |
Lohse O, Lohse K, Augustijnen H, Lucek K. The genome sequence of the scotch argus butterfly, (Esper, 1777). Wellcome Open Research. 7: 217. PMID 36105557 DOI: 10.12688/wellcomeopenres.17927.1 |
0.456 |
|
| 2022 |
Mackintosh A, Laetsch DR, Baril T, Ebdon S, Jay P, Vila R, Hayward A, Lohse K. The genome sequence of the scarce swallowtail, Iphiclides podalirius. G3 (Bethesda, Md.). PMID 35929795 DOI: 10.1093/g3journal/jkac193 |
0.784 |
|
| 2022 |
Setter D, Ebdon S, Jackson B, Lohse K. Estimating the rates of crossover and gene conversion from individual genomes. Genetics. PMID 35771626 DOI: 10.1093/genetics/iyac100 |
0.366 |
|
| 2022 |
Hayward A, Vila R, Lohse K, Laetsch D. The genome sequence of the grizzled skipper, (Linnaeus, 1758). Wellcome Open Research. 7: 114. PMID 35673393 DOI: 10.12688/wellcomeopenres.17806.1 |
0.45 |
|
| 2022 |
Mackintosh A, Laetsch DR, Baril T, Foster R, Dincă V, Vila R, Hayward A, Lohse K. The genome sequence of the lesser marbled fritillary, Brenthis ino, and evidence for a segregating neo-Z chromosome. G3 (Bethesda, Md.). PMID 35348678 DOI: 10.1093/g3journal/jkac069 |
0.768 |
|
| 2021 |
Lohse K, Wright C, Talavera G, García-Berro A. The genome sequence of the painted lady, Linnaeus 1758. Wellcome Open Research. 6: 324. PMID 37008186 DOI: 10.12688/wellcomeopenres.17358.1 |
0.462 |
|
| 2021 |
Vila R, Hayward A, Lohse K, Wright C. The genome sequence of the Glanville fritillary, (Linnaeus, 1758). Wellcome Open Research. 6: 266. PMID 36873711 DOI: 10.12688/wellcomeopenres.17283.1 |
0.462 |
|
| 2021 |
Lohse K, Weir J. The genome sequence of the meadow brown, (Linnaeus, 1758). Wellcome Open Research. 6: 296. PMID 36866280 DOI: 10.12688/wellcomeopenres.17304.1 |
0.464 |
|
| 2021 |
Lohse K, Mackintosh A. The genome sequence of the large white, (Linnaeus, 1758). Wellcome Open Research. 6: 262. PMID 36312456 DOI: 10.12688/wellcomeopenres.17274.1 |
0.462 |
|
| 2021 |
Lohse K, Mackintosh A, Vila R. The genome sequence of the European peacock butterfly, (Linnaeus, 1758). Wellcome Open Research. 6: 258. PMID 36072556 DOI: 10.12688/wellcomeopenres.17204.1 |
0.469 |
|
| 2021 |
Lohse K, Hayward A, Ebdon S. The genome sequences of the male and female green-veined white, (Linnaeus, 1758). Wellcome Open Research. 6: 288. PMID 35846179 DOI: 10.12688/wellcomeopenres.17277.1 |
0.321 |
|
| 2021 |
Lohse K, Laetsch D, Vila R. The genome sequence of the large tortoiseshell, (Linnaeus, 1758). Wellcome Open Research. 6: 238. PMID 35528734 DOI: 10.12688/wellcomeopenres.17196.1 |
0.453 |
|
| 2021 |
Hayward A, Vila R, Laetsch DR, Lohse K, Baril T. The genome sequence of the heath fritillary, (Rottemburg, 1775). Wellcome Open Research. 6: 304. PMID 35136843 DOI: 10.12688/wellcomeopenres.17280.1 |
0.774 |
|
| 2021 |
Bisschop G, Lohse K, Setter D. Sweeps in time: leveraging the joint distribution of branch lengths. Genetics. 219. PMID 34849880 DOI: 10.1093/genetics/iyab119 |
0.331 |
|
| 2021 |
Walton W, Stone GN, Lohse K. Discordant Pleistocene population size histories in a guild of hymenopteran parasitoids. Molecular Ecology. PMID 34252238 DOI: 10.1111/mec.16074 |
0.72 |
|
| 2021 |
Ebdon S, Laetsch DR, Dapporto L, Hayward A, Ritchie MG, Dincă V, Vila R, Lohse K. The Pleistocene species pump past its prime: evidence from European butterfly sister species. Molecular Ecology. PMID 33991396 DOI: 10.1111/mec.15981 |
0.747 |
|
| 2020 |
Bisschop G, Setter D, Rafajlović M, Baird SJE, Lohse K. The impact of global selection on local adaptation and reproductive isolation. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 375: 20190531. PMID 32654652 DOI: 10.1098/Rstb.2019.0531 |
0.402 |
|
| 2020 |
Cooper L, Bunnefeld L, Hearn J, Cook JM, Lohse K, Stone GN. Low coverage genomic data resolve the population divergence and gene flow history of an Australian rain forest fig wasp. Molecular Ecology. PMID 32567765 DOI: 10.1111/Mec.15523 |
0.784 |
|
| 2020 |
Kelleher J, Lohse K. Coalescent Simulation with msprime. Methods in Molecular Biology (Clifton, N.J.). 2090: 191-230. PMID 31975169 DOI: 10.1007/978-1-0716-0199-0_9 |
0.3 |
|
| 2019 |
Mackintosh A, Laetsch DR, Hayward A, Charlesworth B, Waterfall M, Vila R, Lohse K. The determinants of genetic diversity in butterflies. Nature Communications. 10: 3466. PMID 31371715 DOI: 10.1038/S41467-019-11308-4 |
0.724 |
|
| 2018 |
Kolora SRR, Weigert A, Saffari A, Kehr S, Costa MBW, Spröer C, Indrischek H, Chintalapati M, Lohse K, Doose G, Overmann J, Bunk B, Bleidorn C, Grimm-Seyfarth A, Henle K, et al. Divergent evolution in the genomes of closely-related lacertids, Lacerta viridis and L. bilineata and implications for speciation. Gigascience. PMID 30535196 DOI: 10.1093/Gigascience/Giy160 |
0.497 |
|
| 2018 |
Beeravolu CR, Hickerson MJ, Frantz LAF, Lohse K. ABLE: blockwise site frequency spectra for inferring complex population histories and recombination. Genome Biology. 19: 145. PMID 30253810 DOI: 10.1186/S13059-018-1517-Y |
0.489 |
|
| 2018 |
Bunnefeld L, Hearn J, Stone GN, Lohse K. Whole-genome data reveal the complex history of a diverse ecological community. Proceedings of the National Academy of Sciences of the United States of America. PMID 29946026 DOI: 10.1073/Pnas.1800334115 |
0.773 |
|
| 2017 |
Jordan CY, Lohse K, Turner F, Thomson M, Gharbi K, Ennos RA. Maintaining their genetic distance: little evidence for introgression between widely hybridising species of Geum with contrasting mating systems. Molecular Ecology. PMID 29134729 DOI: 10.1111/Mec.14426 |
0.501 |
|
| 2016 |
Nürnberger B, Lohse K, Fijarczyk A, Szymura JM, Blaxter ML. Para-allopatry in hybridising fire-bellied toads (Bombina bombina and B. variegata): Inference from transcriptome-wide coalescence analyses. Evolution; International Journal of Organic Evolution. PMID 27282112 DOI: 10.1111/Evo.12978 |
0.586 |
|
| 2015 |
Lohse K, Chmelik M, Martin SH, Barton NH. Efficient Strategies for Calculating Blockwise Likelihoods under the Coalescent. Genetics. PMID 26715666 DOI: 10.1534/Genetics.115.183814 |
0.458 |
|
| 2015 |
Lohse K, Ross L. What haplodiploids can teach us about hybridization and speciation. Molecular Ecology. 24: 5075-7. PMID 26477297 DOI: 10.1111/Mec.13393 |
0.672 |
|
| 2015 |
Bunnefeld L, Frantz LA, Lohse K. Inferring Bottlenecks from Genome-Wide Samples of Short Sequence Blocks. Genetics. 201: 1157-69. PMID 26341659 DOI: 10.1534/Genetics.115.179861 |
0.482 |
|
| 2015 |
Lohse K, Clarke M, Ritchie MG, Etges WJ. Genome-wide tests for introgression between cactophilic Drosophila implicate a role of inversions during speciation. Evolution; International Journal of Organic Evolution. 69: 1178-90. PMID 25824653 DOI: 10.1111/Evo.12650 |
0.518 |
|
| 2014 |
Frantz LA, Madsen O, Megens HJ, Groenen MA, Lohse K. Testing models of speciation from genome sequences: divergence and asymmetric admixture in Island South-East Asian Sus species during the Plio-Pleistocene climatic fluctuations. Molecular Ecology. 23: 5566-74. PMID 25294645 DOI: 10.1111/Mec.12958 |
0.518 |
|
| 2014 |
Lohse K, Frantz LA. Neandertal admixture in Eurasia confirmed by maximum-likelihood analysis of three genomes. Genetics. 196: 1241-51. PMID 24532731 DOI: 10.1534/Genetics.114.162396 |
0.51 |
|
| 2014 |
Hearn J, Stone GN, Bunnefeld L, Nicholls JA, Barton NH, Lohse K. Likelihood-based inference of population history from low-coverage de novo genome assemblies. Molecular Ecology. 23: 198-211. PMID 24188568 DOI: 10.1111/Mec.12578 |
0.799 |
|
| 2014 |
Hickerson MJ, Stone GN, Lohse K, Demos TC, Xie X, Landerer C, Takebayashi N. Recommendations for using msBayes to incorporate uncertainty in selecting an abc model prior: a response to oaks et Al. Evolution; International Journal of Organic Evolution. 68: 284-94. PMID 24102483 DOI: 10.1111/Evo.12241 |
0.537 |
|
| 2013 |
Melika G, Tang CT, Sinclair F, Yang MM, Lohse K, Hearn J, Nicholls JA, Stone GN. A new genus of oak gallwasp, Cyclocynips Melika, Tang & Sinclair (Hymenoptera: Cynipidae: Cynipini), with descriptions of two new species from Taiwan. Zootaxa. 3630: 534-48. PMID 26131530 DOI: 10.11646/Zootaxa.3630.3.8 |
0.73 |
|
| 2012 |
Lohse K, Barton NH, Melika G, Stone GN. A likelihood-based comparison of population histories in a parasitoid guild. Molecular Ecology. 21: 4605-17. PMID 22891657 DOI: 10.1111/J.1365-294X.2012.05700.X |
0.646 |
|
| 2012 |
Smith G, Lohse K, Etges WJ, Ritchie MG. Model-based comparisons of phylogeographic scenarios resolve the intraspecific divergence of cactophilic Drosophila mojavensis. Molecular Ecology. 21: 3293-307. PMID 22571504 DOI: 10.1111/J.1365-294X.2012.05604.X |
0.446 |
|
| 2012 |
Stone GN, Lohse K, Nicholls JA, Fuentes-Utrilla P, Sinclair F, Schönrogge K, Csóka G, Melika G, Nieves-Aldrey JL, Pujade-Villar J, Tavakoli M, Askew RR, Hickerson MJ. Reconstructing community assembly in time and space reveals enemy escape in a Western Palearctic insect community. Current Biology : Cb. 22: 532-7. PMID 22405865 DOI: 10.1016/J.Cub.2012.01.059 |
0.577 |
|
| 2011 |
Lohse K, Harrison RJ, Barton NH. A general method for calculating likelihoods under the coalescent process. Genetics. 189: 977-87. PMID 21900266 DOI: 10.1534/Genetics.111.129569 |
0.426 |
|
| 2011 |
Lohse K, Sharanowski B, Blaxter M, Nicholls JA, Stone GN. Developing EPIC markers for chalcidoid Hymenoptera from EST and genomic data. Molecular Ecology Resources. 11: 521-9. PMID 21481210 DOI: 10.1111/J.1755-0998.2010.02956.X |
0.742 |
|
| 2011 |
Lohse K, Nicholls JA, Stone GN. Inferring the colonization of a mountain range--refugia vs. nunatak survival in high alpine ground beetles. Molecular Ecology. 20: 394-408. PMID 21073591 DOI: 10.1111/J.1365-294X.2010.04929.X |
0.592 |
|
| 2010 |
Lohse K, Sharanowski B, Stone GN. Quantifying the pleistocene history of the oak gall parasitoid Cecidostiba fungosa using twenty intron loci. Evolution; International Journal of Organic Evolution. 64: 2664-81. PMID 20455927 DOI: 10.1111/J.1558-5646.2010.01024.X |
0.642 |
|
| 2010 |
Kaartinen R, Stone GN, Hearn J, Lohse K, Roslin T. Revealing secret liaisons: DNA barcoding changes our understanding of food webs Ecological Entomology. 35: 623-638. DOI: 10.1111/J.1365-2311.2010.01224.X |
0.736 |
|
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