| Year |
Citation |
Score |
| 2024 |
Beghini F, Pullman J, Alexander M, Shridhar SV, Prinster D, Singh A, Matute Juárez R, Airoldi EM, Brito IL, Christakis NA. Gut microbiome strain-sharing within isolated village social networks. Nature. PMID 39567691 DOI: 10.1038/s41586-024-08222-1 |
0.314 |
|
| 2024 |
Shridhar SV, Beghini F, Alexander M, Singh A, Juárez RM, Brito IL, Christakis NA. Environmental, socioeconomic, and health factors associated with gut microbiome species and strains in isolated Honduras villages. Cell Reports. 43: 114442. PMID 38968070 DOI: 10.1016/j.celrep.2024.114442 |
0.33 |
|
| 2023 |
Blanco-Míguez A, Beghini F, Cumbo F, McIver LJ, Thompson KN, Zolfo M, Manghi P, Dubois L, Huang KD, Thomas AM, Nickols WA, Piccinno G, Piperni E, Punčochář M, Valles-Colomer M, et al. Extending and improving metagenomic taxonomic profiling with uncharacterized species using MetaPhlAn 4. Nature Biotechnology. PMID 36823356 DOI: 10.1038/s41587-023-01688-w |
0.376 |
|
| 2022 |
Ianiro G, Punčochář M, Karcher N, Porcari S, Armanini F, Asnicar F, Beghini F, Blanco-Míguez A, Cumbo F, Manghi P, Pinto F, Masucci L, Quaranta G, De Giorgi S, Sciumè GD, et al. Variability of strain engraftment and predictability of microbiome composition after fecal microbiota transplantation across different diseases. Nature Medicine. 28: 1913-1923. PMID 36109637 DOI: 10.1038/s41591-022-01964-3 |
0.335 |
|
| 2021 |
Beghini F, McIver LJ, Blanco-Míguez A, Dubois L, Asnicar F, Maharjan S, Mailyan A, Manghi P, Scholz M, Thomas AM, Valles-Colomer M, Weingart G, Zhang Y, Zolfo M, Huttenhower C, et al. Integrating taxonomic, functional, and strain-level profiling of diverse microbial communities with bioBakery 3. Elife. 10. PMID 33944776 DOI: 10.7554/eLife.65088 |
0.383 |
|
| 2020 |
Asnicar F, Thomas AM, Beghini F, Mengoni C, Manara S, Manghi P, Zhu Q, Bolzan M, Cumbo F, May U, Sanders JG, Zolfo M, Kopylova E, Pasolli E, Knight R, et al. Precise phylogenetic analysis of microbial isolates and genomes from metagenomes using PhyloPhlAn 3.0. Nature Communications. 11: 2500. PMID 32427907 DOI: 10.1038/S41467-020-16366-7 |
0.315 |
|
| 2017 |
Beghini F, Pasolli E, Truong TD, Putignani L, Cacciò SM, Segata N. Large-scale comparative metagenomics of Blastocystis, a common member of the human gut microbiome. The Isme Journal. PMID 28837129 DOI: 10.1038/Ismej.2017.139 |
0.368 |
|
| 2017 |
Tett A, Pasolli E, Farina S, Truong DT, Asnicar F, Zolfo M, Beghini F, Armanini F, Jousson O, De Sanctis V, Bertorelli R, Girolomoni G, Cristofolini M, Segata N. Unexplored diversity and strain-level structure of the skin microbiome associated with psoriasis. Npj Biofilms and Microbiomes. 3: 14. PMID 28649415 DOI: 10.1038/s41522-017-0022-5 |
0.423 |
|
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