Han Fang - Publications

Affiliations: 
 

15 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Nattestad M, Goodwin S, Ng K, Baslan T, Sedlazeck F, Rescheneder P, Garvin T, Fang H, Gurtowski J, Hutton E, Tseng E, Chin J, Beck T, Sundaravadanam Y, Kramer M, et al. Complex rearrangements and oncogene amplifications revealed by long-read DNA and RNA sequencing of a breast cancer cell line. Genome Research. PMID 29954844 DOI: 10.1101/Gr.231100.117  0.506
2018 Sedlazeck FJ, Rescheneder P, Smolka M, Fang H, Nattestad M, von Haeseler A, Schatz MC. Accurate detection of complex structural variations using single-molecule sequencing. Nature Methods. PMID 29713083 DOI: 10.1038/S41592-018-0001-7  0.5
2018 Fang H, Huang YF, Radhakrishnan A, Siepel A, Lyon GJ, Schatz MC. Scikit-ribo Enables Accurate Estimation and Robust Modeling of Translation Dynamics at Codon Resolution. Cell Systems. PMID 29361467 DOI: 10.1016/J.Cels.2017.12.007  0.668
2017 Vurture GW, Sedlazeck FJ, Nattestad M, Underwood CJ, Fang H, Gurtowski J, Schatz MC. GenomeScope: Fast reference-free genome profiling from short reads. Bioinformatics (Oxford, England). PMID 28369201 DOI: 10.1093/Bioinformatics/Btx153  0.49
2017 Fang H, Wu Y, Yang H, Yoon M, Jiménez-Barrón LT, Mittelman D, Robison R, Wang K, Lyon GJ. Whole genome sequencing of one complex pedigree illustrates challenges with genomic medicine. Bmc Medical Genomics. 10: 10. PMID 28228131 DOI: 10.1186/S12920-017-0246-5  0.81
2016 Fang H, Bergmann EA, Arora K, Vacic V, Zody MC, Iossifov I, O'Rawe JA, Wu Y, Jimenez Barron LT, Rosenbaum J, Ronemus M, Lee YH, Wang Z, Dikoglu E, Jobanputra V, et al. Indel variant analysis of short-read sequencing data with Scalpel. Nature Protocols. 11: 2529-2548. PMID 27854363 DOI: 10.1038/Nprot.2016.150  0.604
2016 Dörfel MJ, Fang H, Crain J, Klingener M, Weiser J, Lyon GJ. Proteomic and genomic characterization of a yeast model for Ogden syndrome. Yeast (Chichester, England). PMID 27668839 DOI: 10.1002/Yea.3211  0.661
2016 Pan X, Lin D, Zheng Y, Zhang Q, Yin Y, Cai L, Fang H, Yu Y. Biodegradation of DDT by Stenotrophomonas sp. DDT-1: Characterization and genome functional analysis. Scientific Reports. 6: 21332. PMID 26888254 DOI: 10.1038/Srep21332  0.339
2016 Cheng C, Zhou Y, Li H, Xiong T, Li S, Bi Y, Kong P, Wang F, Cui H, Li Y, Fang X, Yan T, Li Y, Wang J, Yang B, ... Fang H, et al. Whole-Genome Sequencing Reveals Diverse Models of Structural Variations in Esophageal Squamous Cell Carcinoma. American Journal of Human Genetics. PMID 26833333 DOI: 10.1016/j.ajhg.2015.12.013  0.392
2015 Jiménez-Barrón LT, O'Rawe JA, Wu Y, Yoon M, Fang H, Iossifov I, Lyon GJ. Genome-wide variant analysis of simplex autism families with an integrative clinical-bioinformatics pipeline. Cold Spring Harbor Molecular Case Studies. 1: a000422. PMID 27148569 DOI: 10.1101/mcs.a000422  0.782
2015 O'Rawe JA, Wu Y, Dörfel MJ, Rope AF, Au PY, Parboosingh JS, Moon S, Kousi M, Kosma K, Smith CS, Tzetis M, Schuette JL, Hufnagel RB, Prada CE, Martinez F, ... ... Fang H, et al. TAF1 Variants Are Associated with Dysmorphic Features, Intellectual Disability, and Neurological Manifestations. American Journal of Human Genetics. 97: 922-32. PMID 26637982 DOI: 10.1016/J.Ajhg.2015.11.005  0.728
2015 Bai C, Li Y, Yan S, Fang H, Sun B, Zhang J, Zhao Z. Identification and characterization of the cDNA sequence encoding amelogenin in rabbit (Oryctolagus cuniculus). Gene. PMID 26551300 DOI: 10.1016/j.gene.2015.11.004  0.353
2014 Fang H, Wu Y, Narzisi G, O'Rawe JA, Barrón LT, Rosenbaum J, Ronemus M, Iossifov I, Schatz MC, Lyon GJ. Reducing INDEL calling errors in whole genome and exome sequencing data. Genome Medicine. 6: 89. PMID 25426171 DOI: 10.1186/S13073-014-0089-Z  0.764
2014 Narzisi G, O'Rawe JA, Iossifov I, Fang H, Lee YH, Wang Z, Wu Y, Lyon GJ, Wigler M, Schatz MC. Accurate de novo and transmitted indel detection in exome-capture data using microassembly. Nature Methods. 11: 1033-6. PMID 25128977 DOI: 10.1038/Nmeth.3069  0.741
2013 O'Rawe JA, Fang H, Rynearson S, Robison R, Kiruluta ES, Higgins G, Eilbeck K, Reese MG, Lyon GJ. Integrating precision medicine in the study and clinical treatment of a severely mentally ill person. Peerj. 1: e177. PMID 24109560 DOI: 10.7717/Peerj.177  0.773
Show low-probability matches.