James Timothy Hollibaugh, Ph.D. - Publications

Affiliations: 
Franklin College of Marine Science University of Georgia, Athens, Athens, GA, United States 

116 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Tolar BB, Ross MJ, Wallsgrove NJ, Liu Q, Aluwihare LI, Popp BN, Hollibaugh JT. Contribution of ammonia oxidation to chemoautotrophy in Antarctic coastal waters. The Isme Journal. PMID 27187795 DOI: 10.1038/Ismej.2016.61  0.52
2016 Liu Q, Nishibori N, Imai I, Hollibaugh JT. Response of polyamine pools in marine phytoplankton to nutrient limitation and variation in temperature and salinity Marine Ecology Progress Series. 544: 93-105. DOI: 10.3354/Meps11583  0.52
2015 Lu X, Sun S, Hollibaugh JT, Mou X. Identification of Polyamine-responsive Bacterioplankton Taxa in South Atlantic Bight. Environmental Microbiology Reports. PMID 26109269 DOI: 10.1111/1758-2229.12311  0.52
2015 Lu X, Sun S, Zhang YQ, Hollibaugh JT, Mou X. Temporal and vertical distributions of bacterioplankton at the Gray's Reef National Marine Sanctuary. Applied and Environmental Microbiology. 81: 910-7. PMID 25416764 DOI: 10.1128/Aem.02802-14  0.52
2015 Givens CE, Ransom B, Bano N, Hollibaugh JT. Comparison of the gut microbiomes of 12 bony fish and 3 shark species Marine Ecology Progress Series. 518: 209-223. DOI: 10.3354/Meps11034  0.52
2015 Liu Q, Lu X, Tolar BB, Mou X, Hollibaugh JT. Concentrations, turnover rates and fluxes of polyamines in coastal waters of the South Atlantic Bight Biogeochemistry. 123: 117-133. DOI: 10.1007/S10533-014-0056-1  0.52
2015 Alber M, Pennings SC, Hollibaugh JT. Program profile: The Georgia coastal Ecosystems long term Ecological research Project (GCE-LTER) Limnology and Oceanography Bulletin. 24: 117-120. DOI: 10.1002/Lob.10063  0.52
2014 Givens CE, Bowers JC, DePaola A, Hollibaugh JT, Jones JL. Occurrence and distribution of Vibrio vulnificus and Vibrio parahaemolyticus--potential roles for fish, oyster, sediment and water. Letters in Applied Microbiology. 58: 503-10. PMID 24571291 DOI: 10.1111/lam.12226  0.52
2014 Shilova IN, Robidart JC, James Tripp H, Turk-Kubo K, Wawrik B, Post AF, Thompson AW, Ward B, Hollibaugh JT, Millard A, Ostrowski M, Scanlan DJ, Paerl RW, Stuart R, Zehr JP. A microarray for assessing transcription from pelagic marine microbial taxa. The Isme Journal. 8: 1476-91. PMID 24477198 DOI: 10.1038/Ismej.2014.1  0.52
2014 Abin CA, Hollibaugh JT. Dissimilatory antimonate reduction and production of antimony trioxide microcrystals by a novel microorganism Environmental Science and Technology. 48: 681-688. PMID 24319985 DOI: 10.1021/Es404098Z  0.52
2014 Luo H, Tolar BB, Swan BK, Zhang CL, Stepanauskas R, Ann Moran M, Hollibaugh JT. Single-cell genomics shedding light on marine Thaumarchaeota diversification Isme Journal. 8: 732-736. PMID 24196320 DOI: 10.1038/Ismej.2013.202  0.52
2014 Hollibaugh JT, Gifford SM, Moran MA, Ross MJ, Sharma S, Tolar BB. Seasonal variation in the metratranscriptomes of a Thaumarchaeota population from SE USA coastal waters Isme Journal. 8: 685-698. PMID 24132081 DOI: 10.1038/Ismej.2013.171  0.52
2014 Edwardson CF, Planer-Friedrich B, Hollibaugh JT. Transformation of monothioarsenate by haloalkaliphilic, anoxygenic photosynthetic purple sulfur bacteria Fems Microbiology Ecology. 90: 858-868. DOI: 10.1111/1574-6941.12440  0.52
2014 Lu X, Zou L, Clevinger C, Liu Q, Hollibaugh JT, Mou X. Temporal dynamics and depth variations of dissolved free amino acids and polyamines in coastal seawater determined by high-performance liquid chromatography Marine Chemistry. 163: 36-44. DOI: 10.1016/J.Marchem.2014.04.004  0.52
2013 Smith CB, Tolar BB, Hollibaugh JT, King GM. Alkane hydroxylase gene (alkB) phylotype composition and diversity in northern Gulf of Mexico bacterioplankton. Frontiers in Microbiology. 4: 370. PMID 24376439 DOI: 10.3389/Fmicb.2013.00370  0.52
2013 Dubinsky EA, Conrad ME, Chakraborty R, Bill M, Borglin SE, Hollibaugh JT, Mason OU, M Piceno Y, Reid FC, Stringfellow WT, Tom LM, Hazen TC, Andersen GL. Succession of hydrocarbon-degrading bacteria in the aftermath of the deepwater horizon oil spill in the gulf of Mexico. Environmental Science & Technology. 47: 10860-7. PMID 23937111 DOI: 10.1021/Es401676Y  0.52
2013 Tolar BB, King GM, Hollibaugh JT. An analysis of thaumarchaeota populations from the northern gulf of Mexico. Frontiers in Microbiology. 4: 72. PMID 23577005 DOI: 10.3389/Fmicb.2013.00072  0.52
2013 Givens CE, Burnett KG, Burnett LE, Hollibaugh JT. Microbial communities of the carapace, gut, and hemolymph of the Atlantic blue crab, Callinectes sapidus Marine Biology. 160: 2841-2851. DOI: 10.1007/S00227-013-2275-8  0.52
2012 King GM, Smith CB, Tolar B, Hollibaugh JT. Analysis of composition and structure of coastal to mesopelagic bacterioplankton communities in the northern gulf of Mexico. Frontiers in Microbiology. 3: 438. PMID 23346078 DOI: 10.3389/Fmicb.2012.00438  0.52
2012 First MR, Park NY, Berrang ME, Meinersmann RJ, Bernhard JM, Gast RJ, Hollibaugh JT. Ciliate ingestion and digestion: Flow cytometric measurements and regrowth of a digestion-resistant Campylobacter jejuni Journal of Eukaryotic Microbiology. 59: 12-19. PMID 22092598 DOI: 10.1111/J.1550-7408.2011.00589.X  0.52
2012 Feike J, Jürgens K, Hollibaugh JT, Krüger S, Jost G, Labrenz M. Measuring unbiased metatranscriptomics in suboxic waters of the central Baltic Sea using a new in situ fixation system Isme Journal. 6: 461-470. PMID 21776032 DOI: 10.1038/Ismej.2011.94  0.52
2011 Hollibaugh JT, Gifford S, Sharma S, Bano N, Moran MA. Metatranscriptomic analysis of ammonia-oxidizing organisms in an estuarine bacterioplankton assemblage Isme Journal. 5: 866-878. PMID 21085199 DOI: 10.1038/Ismej.2010.172  0.52
2011 Cai WJ, Hu X, Huang WJ, Murrell MC, Lehrter JC, Lohrenz SE, Chou WC, Zhai W, Hollibaugh JT, Wang Y, Zhao P, Guo X, Gundersen K, Dai M, Gong GC. Acidification of subsurface coastal waters enhanced by eutrophication Nature Geoscience. 4: 766-770. DOI: 10.1038/Ngeo1297  0.52
2010 Lyons JI, Alber M, Hollibaugh JT. Ascomycete fungal communities associated with early decaying leaves of Spartina spp. from central California estuaries. Oecologia. 162: 435-42. PMID 19777266 DOI: 10.1007/S00442-009-1460-4  0.52
2010 First MR, Hollibaugh JT. Environmental factors shaping microbial community structure in salt marsh sediments Marine Ecology Progress Series. 399: 15-26. DOI: 10.3354/Meps08385  0.52
2010 Caffrey JM, Hollibaugh JT, Bano N, Haskins J. Effects of upwelling on short-term variability in microbial and biogeochemical processes in estuarine sediments from Elkhorn Slough, California, USA Aquatic Microbial Ecology. 58: 261-271. DOI: 10.3354/Ame01387  0.52
2010 First MR, Hollibaugh JT. Diel depth distributions of microbenthos in tidal creek sediments: High resolution mapping in fluorescently labeled embedded cores Hydrobiologia. 655: 149-158. DOI: 10.1007/S10750-010-0417-2  0.52
2009 Kalanetra KM, Bano N, Hollibaugh JT. Ammonia-oxidizing archaea in the arctic ocean and antarctic coastal waters Environmental Microbiology. 11: 2434-2445. PMID 19601959 DOI: 10.1111/J.1462-2920.2009.01974.X  0.52
2009 Weston NB, Hollibaugh JT, Joye SB. Population growth away from the coastal zone: Thirty years of land use change and nutrient export in the Altamaha River, GA Science of the Total Environment. 407: 3347-3356. PMID 19246074 DOI: 10.1016/J.Scitotenv.2008.12.066  0.52
2009 First MR, Hollibaugh JT. The model high molecular weight DOC compound, dextran, is ingested by the benthic ciliate Uronema marinum but does not supplement ciliate growth Aquatic Microbial Ecology. 57: 79-87. DOI: 10.3354/Ame01338  0.52
2009 Oremland RS, Stolz JF, Madigan M, Hollibaugh JT, Kulp TR, Hoeft SE, Fisher J, Miller LG, Culbertson CW, Asao M. Response to comment on "Arsenic(III) fuels anoxygenic photosynthesis in hot spring biofilms from Mono Lake, California" Science. 323: 583d. DOI: 10.1126/Science.1166435  0.52
2009 Planer-Friedrich B, Fisher JC, Hollibaugh JT, Elke S, Wallschläger D. Oxidative transformation of trithioarsenate along alkaline geothermal drainages-abiotic versus microbially mediated processes Geomicrobiology Journal. 26: 339-350. DOI: 10.1080/01490450902755364  0.52
2009 Schaefer SC, Hollibaugh JT, Alber M. Watershed nitrogen input and riverine export on the west coast of the US Biogeochemistry. 93: 219-233. DOI: 10.1007/S10533-009-9299-7  0.52
2008 Kulp TR, Hoeft SE, Asao M, Madigan MT, Hollibaugh JT, Fisher JC, Stolz JF, Culbertson CW, Miller LG, Oremland RS. Arsenic(III) fuels anoxygenic photosynthesis in hot spring biofilms from Mono Lake, California Science. 321: 967-970. PMID 18703741 DOI: 10.1126/Science.1160799  0.52
2008 Fisher JC, Wallschläger D, Planer-Friedrich B, Hollibaugh JT. A new role for sulfur in arsenic cycling Environmental Science and Technology. 42: 81-85. PMID 18350879 DOI: 10.1021/Es0713936  0.52
2008 Fisher JC, Hollibaugh JT. Selenate-dependent anaerobic arsenite oxidation by a bacterium from Mono Lake, California Applied and Environmental Microbiology. 74: 2588-2594. PMID 18326681 DOI: 10.1128/Aem.01995-07  0.52
2008 Budinoff CR, Hollibaugh JT. Arsenite-dependent photoautotrophy by an Ectothiorhodospira-dominated consortium Isme Journal. 2: 340-343. PMID 18219283 DOI: 10.1038/Ismej.2007.115  0.52
2008 Magalhães C, Bano N, Wiebe WJ, Bordalo AA, Hollibaugh JT. Dynamics of nitrous oxide reductase genes (nosZ) in intertidal rocky biofilms and sediments of the Douro River estuary (Portugal), and their relation to N-biogeochemistry. Microbial Ecology. 55: 259-69. PMID 17604988 DOI: 10.1007/S00248-007-9273-7  0.52
2008 First MR, Hollibaugh JT. Protisten bacterivory and benthic microbial biomass in an intertidal creek mudflat Marine Ecology Progress Series. 361: 59-68. DOI: 10.3354/Meps07422  0.52
2008 Jørgensen N, Engel P, Jellison R, Hollibaugh J. Contribution of bacterial cell wall components to DOM in alkaline, hypersaline mono lake, California Geomicrobiology Journal. 25: 38-55. DOI: 10.1080/01490450701828990  0.52
2008 Magalhães C, Bano N, Wiebe WJ, Bordalo AA, Hollibaugh JT. Dynamics of nitrous oxide reductase genes (nosZ) in intertidal rocky biofilms and sediments of the Douro river estuary (Portugal), and their relation to N-biogeochemistry (Microbial Ecology 55, 2, (259-269) DOI: 10.1007/s00248-007-9273-7) Microbial Ecology. 56: 765-766. DOI: 10.1007/s00248-008-9419-2  0.52
2007 Caffrey JM, Bano N, Kalanetra K, Hollibaugh JT. Ammonia oxidation and ammonia-oxidizing bacteria and archaea from estuaries with differing histories of hypoxia Isme Journal. 1: 660-662. PMID 18043673 DOI: 10.1038/Ismej.2007.79  0.52
2007 Magalhães C, Bano N, Wiebe WJ, Hollibaugh JT, Bordalo AA. Composition and activity of beta-Proteobacteria ammonia-oxidizing communities associated with intertidal rocky biofilms and sediments of the Douro River estuary, Portugal. Journal of Applied Microbiology. 103: 1239-50. PMID 17897228 DOI: 10.1111/J.1365-2672.2007.03390.X  0.52
2007 Bano N, DeRae Smith A, Bennett W, Vasquez L, Hollibaugh JT. Dominance of Mycoplasma in the guts of the Long-Jawed Mudsucker, Gillichthys mirabilis, from five California salt marshes Environmental Microbiology. 9: 2636-2641. PMID 17803786 DOI: 10.1111/J.1462-2920.2007.01381.X  0.52
2007 LeCleir GR, Buchan A, Maurer J, Moran MA, Hollibaugh JT. Comparison of chitinolytic enzymes from an alkaline, hypersaline lake and an estuary Environmental Microbiology. 9: 197-205. PMID 17227424 DOI: 10.1111/J.1462-2920.2006.01128.X  0.52
2007 Hollibaugh JT, Lovejoy C, Murray AE. Microbiology in polar oceans Oceanography. 20: 140-145. DOI: 10.5670/Oceanog.2007.59  0.52
2007 Budinoff CR, Hollibaugh JT. Ecophysiology of a Mono Lake picocyanobacterium Limnology and Oceanography. 52: 2484-2495. DOI: 10.4319/Lo.2007.52.6.2484  0.52
2007 Steward GF, Fandino LB, Hollibaugh JT, Whitledge TE, Azam F. Microbial biomass and viral infections of heterotrophic prokaryotes in the sub-surface layer of the central Arctic Ocean Deep-Sea Research Part I: Oceanographic Research Papers. 54: 1744-1757. DOI: 10.1016/j.dsr.2007.04.019  0.52
2006 Hollibaugh JT, Budinoff C, Hollibaugh RA, Ransom B, Bano N. Sulfide oxidation coupled to arsenate reduction by a diverse microbial community in a soda lake Applied and Environmental Microbiology. 72: 2043-2049. PMID 16517653 DOI: 10.1128/Aem.72.3.2043-2049.2006  0.52
2006 Smith SV, Hollibaugh JT. Water, salt, and nutrient exchanges in San Francisco Bay Limnology and Oceanography. 51: 504-517. DOI: 10.4319/Lo.2006.51.1_Part_2.0504  0.52
2006 LeCleir GR, Hollibaugh JT. Chitinolytic bacteria from alkaline hypersaline Mono Lake, California, USA Aquatic Microbial Ecology. 42: 255-264. DOI: 10.3354/Ame042255  0.52
2005 Scholten JC, Joye SB, Hollibaugh JT, Murrell JC. Molecular analysis of the sulfate reducing and archaeal community in a meromictic soda lake (Mono Lake, California) by targeting 16S rRNA, mcrA, apsA, and dsrAB genes. Microbial Ecology. 50: 29-39. PMID 16132423 DOI: 10.1007/S00248-004-0085-8  0.52
2005 Poretsky RS, Bano N, Buchan A, LeCleir G, Kleikemper J, Pickering M, Pate WM, Moran MA, Hollibaugh JT. Analysis of microbial gene transcripts in environmental samples Applied and Environmental Microbiology. 71: 4121-4126. PMID 16000831 DOI: 10.1128/Aem.71.7.4121-4126.2005  0.52
2005 Hodges LR, Bano N, Hollibaugh JT, Yager PL. Illustrating the importance of particulate organic matter to pelagic microbial abundance and community structure - An Arctic case study Aquatic Microbial Ecology. 40: 217-227. DOI: 10.3354/Ame040217  0.52
2005 Hollibaugh JT, Carini S, Gürleyük H, Jellison R, Joye SB, LeCleir G, Meile C, Vasquez L, Wallschläger D. Arsenic speciation in Mono Lake, California: Response to seasonal stratification and anoxia Geochimica Et Cosmochimica Acta. 69: 1925-1937. DOI: 10.1016/J.Gca.2004.10.011  0.52
2005 Stepanauskas R, Moran MA, Bergamaschi BA, Hollibaugh JT. Sources, bioavailability, and photoreactivity of dissolved organic carbon in the Sacramento-San Joaquin River Delta Biogeochemistry. 74: 131-149. DOI: 10.1007/S10533-004-3361-2  0.52
2004 Oremland RS, Stolz JF, Hollibaugh JT. The microbial arsenic cycle in Mono Lake, California Fems Microbiology Ecology. 48: 15-27. PMID 19712427 DOI: 10.1016/J.Femsec.2003.12.016  0.52
2004 LeCleir GR, Buchan A, Hollibaugh JT. Chitinase gene sequences retrieved from diverse aquatic habitats reveal environment-specific distributions Applied and Environmental Microbiology. 70: 6977-6983. PMID 15574890 DOI: 10.1128/Aem.70.12.6977-6983.2004  0.52
2004 Steward GF, Zehr JP, Jellison R, Montoya JP, Hollibaugh JT. Vertical distribution of nitrogen-fixing phylotypes in a meromictic, hypersaline lake. Microbial Ecology. 47: 30-40. PMID 15259267 DOI: 10.1007/S00248-003-1017-8  0.52
2004 Giri BJ, Bano N, Hollibaugh JT. Distribution of RuBisCO genotypes along a redox gradient in Mono Lake, California Applied and Environmental Microbiology. 70: 3443-3448. PMID 15184142 DOI: 10.1128/Aem.70.6.3443-3448.2004  0.52
2004 Hoeft SE, Kulp TR, Stolz JF, Hollibaugh JT, Oremland RS. Dissimilatory arsenate reduction with sulfide as electron donor: Experiments with Mono Lake water and isolation of strain MLMS-1, a chemoautotrophic arsenate respirer Applied and Environmental Microbiology. 70: 2741-2747. PMID 15128527 DOI: 10.1128/Aem.70.5.2741-2747.2004  0.52
2004 Bano N, Ruffin S, Ransom B, Hollibaugh JT. Phylogenetic Composition of Arctic Ocean Archaeal Assemblages and Comparison with Antarctic Assemblages Applied and Environmental Microbiology. 70: 781-789. PMID 14766555 DOI: 10.1128/Aem.70.2.781-789.2004  0.52
2003 Buchan A, Newell SY, Butler M, Biers EJ, Hollibaugh JT, Moran MA. Dynamics of Bacterial and Fungal Communities on Decaying Salt Marsh Grass? Applied and Environmental Microbiology. 69: 6676-6687. PMID 14602628 DOI: 10.1128/Aem.69.11.6676-6687.2003  0.52
2003 Humayoun SB, Bano N, Hollibaugh JT. Depth distribution of microbial diversity in mono lake, a meromictic soda lake in California Applied and Environmental Microbiology. 69: 1030-1042. PMID 12571026 DOI: 10.1128/Aem.69.2.1030-1042.2003  0.52
2003 Stepanauskas R, Moran MA, Bergamaschi BA, Hollibaugh JT. Covariance of bacterioplankton composition and environmental variables in a temperate delta system Aquatic Microbial Ecology. 31: 85-98. DOI: 10.3354/Ame031085  0.52
2002 Oremland RS, Hoeft SE, Santini JM, Bano N, Hollibaugh RA, Hollibaugh JT. Anaerobic oxidation of arsenite in Mono Lake water and by a facultative, arsenite-oxidizing chemoautotroph, strain MLHE-1 Applied and Environmental Microbiology. 68: 4795-4802. PMID 12324322 DOI: 10.1128/Aem.68.10.4795-4802.2002  0.52
2002 Hollibaugh JT, Bano N, Ducklow HW. Widespread distribution in polar oceans of a 16S rRNA gene sequence with affinity to Nitrosospira-like ammonia-oxidizing bacteria Applied and Environmental Microbiology. 68: 1478-1484. PMID 11872506 DOI: 10.1128/Aem.68.3.1478-1484.2002  0.52
2002 Bano N, Hollibaugh JT. Phylogenetic composition of bacterioplankton assemblages from the Arctic Ocean Applied and Environmental Microbiology. 68: 505-518. PMID 11823184 DOI: 10.1128/Aem.68.2.505-518.2002  0.52
2002 Hoeft SE, Lucas F, Hollibaugh JT, Oremland RS. Characterization of microbial arsenate reduction in the anoxic bottom waters of Mono Lake, California Geomicrobiology Journal. 19: 23-40. DOI: 10.1080/014904502317246147  0.52
2002 Sun MY, Cai WJ, Joye SB, Ding H, Dai J, Hollibaugh JT. Degradation of algal lipids in microcosm sediments with different mixing regimes Organic Geochemistry. 33: 445-459. DOI: 10.1016/S0146-6380(02)00005-0  0.52
2001 Lucas FS, Hollibaugh JT. Response of sediment bacterial assemblages to selenate and acetate amendments. Environmental Science & Technology. 35: 528-34. PMID 11351724 DOI: 10.1021/Es001492I  0.52
2001 Yager PL, Connelly TL, Mortazavi B, Wommack KE, Bano N, Bauer JE, Opsahl S, Hollibaugh JT. Dynamic bacterial and viral response to an algal bloom at subzero temperatures Limnology and Oceanography. 46: 790-801. DOI: 10.4319/Lo.2001.46.4.0790  0.52
2001 Hollibaugh JT, Wong PS, Bano N, Pak SK, Prager EM, Orrego C. Stratification of microbial assemblages in Mono Lake, California, and response to a mixing event Hydrobiologia. 466: 45-60. DOI: 10.1007/978-94-017-2934-5_5  0.52
2000 Bano N, Hollibaugh JT. Diversity and distribution of DNA sequences with affinity to ammonia- oxidizing bacteria of the β subdivision of the class proteobacteria in the arctic ocean Applied and Environmental Microbiology. 66: 1960-1969. PMID 10788367 DOI: 10.1128/Aem.66.5.1960-1969.2000  0.52
2000 Hollibaugh JT, Wong PS, Murrell MC. Similarity of particle-associated and free-living bacterial communities in northern San Francisco Bay, California Aquatic Microbial Ecology. 21: 103-114. DOI: 10.3354/Ame021103  0.52
2000 Chambers RM, Hollibaugh JT, Snively CS, Plant JN. Iron, sulfur, and carbon diagenesis in sediments of Tomales Bay, California Estuaries. 23: 1-9. DOI: 10.2307/1353220  0.52
2000 Murrell MC, Hollibaugh JT. Distribution and composition of dissolved and particulate organic carbon in northern San Francisco Bay during low flow conditions Estuarine, Coastal and Shelf Science. 51: 75-90. DOI: 10.1006/Ecss.2000.0639  0.52
1999 Murrell MC, Hollibaugh JT, Silver MW, Wong PS. Bacterioplankton dynamics in northern San Francisco Bay: Role of particle association and seasonal freshwater flow Limnology and Oceanography. 44: 295-308. DOI: 10.4319/Lo.1999.44.2.0295  0.52
1999 Hollibaugh JT, Wong PS. Microbial processes in the San Francisco Bay estuarine turbidity maximum Estuaries. 22: 848-862. DOI: 10.2307/1353066  0.52
1999 Ferrari VC, Hollibaugh JT. Distribution of microbial assemblages in the Central Arctic Ocean Basin studied by PCR/DGGE: Analysis of a large data set Hydrobiologia. 401: 55-68. DOI: 10.1007/978-94-011-4201-4_5  0.52
1998 Murrell MC, Hollibaugh JT. Microzooplankton grazing in northern San Francisco Bay measured by the dilution method Aquatic Microbial Ecology. 15: 53-63. DOI: 10.3354/Ame015053  0.52
1998 Werner I, Kline KF, Hollibaugh JT. Stress protein expression in Ampelisca abdita (Amphipoda) exposed to sediments from San Francisco Bay Marine Environmental Research. 45: 417-430. DOI: 10.1016/S0141-1136(98)00103-2  0.52
1998 Smith SV, Hollibaugh JT. Carbon-nitrogen-phosphorus cycling in Tomales Bay, California Aquatic Geochemistry. 4: 395-402.  0.52
1997 Fourqurean JW, Moore TO, Fry B, Hollibaugh JT. Spatial and temporal variation in C:N:P ratios, δ15N, and δ13C of eelgrass Zostera marina as indicators of ecosystem processes, Tomales Bay, California, USA Marine Ecology Progress Series. 157: 147-157. DOI: 10.3354/Meps157147  0.52
1997 Smith SV, Hollibaugh JT. Annual cycle and interannual variability of ecosystem metabolism in a temperate climate embayment Ecological Monographs. 67: 509-533. DOI: 10.1890/0012-9615(1997)067[0509:Acaivo]2.0.Co;2  0.52
1997 Largier JL, Hollibaugh JT, Smith SV. Seasonally hypersaline estuaries in Mediterranean-climate regions Estuarine, Coastal and Shelf Science. 45: 789-797. DOI: 10.1006/Ecss.1997.0279  0.52
1997 Fourqurean JW, Webb KL, Hollibaugh JT, Smith SV. Contributions of the plankton community to ecosystem respiration, Tomales Bay, California Estuarine, Coastal and Shelf Science. 44: 493-505. DOI: 10.1006/Ecss.1996.0130  0.52
1996 Murray AE, Hollibaugh JT, Orrego C. Phylogenetic compositions of bacterioplankton from two California estuaries compared by denaturing gradient gel electrophoresis of 16S rDNA fragments Applied and Environmental Microbiology. 62: 2676-2680. PMID 8779608 DOI: 10.1128/Aem.62.7.2676-2680.1996  0.52
1996 Smith SV, Chambers RM, Hollibaugh JT. Dissolved and particulate nutrient transport through a coastal watershed-estuary system Journal of Hydrology. 176: 181-203. DOI: 10.1016/0022-1694(95)02781-5  0.52
1996 Joye SB, Smith SV, Hollibaugh JT, Paerl HW. Estimating denitrification rates in estuarine sediments: A comparison of stoichiometric and acetylene based methods Biogeochemistry. 33: 197-215. DOI: 10.1007/Bf02181072  0.52
1996 Joye SB, Mazzotta ML, Hollibaugh JT. Community metabolism in microbial mats: The occurrence of biologically- mediated iron and manganese reduction Estuarine, Coastal and Shelf Science. 43: 747-766. DOI: 10.1006/Ecss.1996.0101  0.52
1995 Chambers RM, Fourqurean JW, Hollibaugh JT, Vink SM. Importance of terrestrially-derived, particulate phosphorus to phosphorus dynamics in a west coast estuary Estuaries. 18: 518-526. DOI: 10.2307/1352369  0.52
1995 Joye SB, Hollibaugh JT. Influence of sulfide inhibition of nitrification on nitrogen regeneration in sediments Science. 270: 623-625. DOI: 10.1126/Science.270.5236.623  0.52
1994 Sansone FJ, Hollibaugh JT, Vink SM, Chambers RM, Joye SB, Popp BN. Diver-operated piston corer for nearshore use Estuaries. 17: 716-720. DOI: 10.2307/1352420  0.52
1994 Hollibaugh JT. Relationship between thymidine metabolism, bacterioplankton community metabolic capabilities, and sources of organic matter Microbial Ecology. 28: 117-131. DOI: 10.1007/BF00166800  0.52
1994 Chambers RM, Hollibaugh JT, Vink SM. Sulfate reduction and sediment metabolism in Tomales Bay, California Biogeochemistry. 25: 1-18. DOI: 10.1007/Bf00000509  0.52
1994 Chambers RM, Smith SV, Hollibaugh JT. An ecosystem-level context for tidal exchange studies in salt marshes of Tomales Bay, Califronia, USA Global Wetlands. 265-276.  0.52
1993 Werner I, Hollibaugh JT. Potamocorbula amurensis: comparison of clearance rates and assimilation efficiencies for phytoplankton and bacterioplankton Limnology & Oceanography. 38: 949-964. DOI: 10.4319/Lo.1993.38.5.0949  0.52
1993 Smith SV, Hollibaugh JT. Coastal metabolism and the oceanic organic carbon balance Reviews of Geophysics. 31: 75-89. DOI: 10.1029/92Rg02584  0.52
1993 Kimmerer WJ, Smith SV, Hollibaugh JT. A Simple Heuristic Model of Nutrient Cycling in an Estuary Estuarine, Coastal and Shelf Science. 37: 145-159. DOI: 10.1006/Ecss.1993.1048  0.52
1992 Prasad KS, Hollibaugh JT. Quantum yield estimates of phytoplankton on the Grand Banks for use in production models Limnology & Oceanography. 37: 1271-1279. DOI: 10.4319/Lo.1992.37.6.1271  0.52
1992 Hollibaugh JT, Wong PS. Ethanol-extractable substrate pools and the incorporation of thymidine, L-leucine, and other substrates by bacterioplankton Canadian Journal of Microbiology. 38: 605-613. DOI: 10.1139/M92-100  0.52
1992 Prasad KS, Hollibaugh JT, Schneider DC, Haedrich RL. A model for determining primary production on the Grand banks Continental Shelf Research. 12: 563-575. DOI: 10.1016/0278-4343(92)90020-K  0.52
1991 Azam F, Smith DC, Hollibaugh JT. The role of the microbial loop in Antarctic pelagic ecosystems Polar Research. 10: 239-243. DOI: 10.3402/Polar.V10I1.6742  0.52
1991 Dollar SJ, Smith SV, Vink SM, Obrebski S, Hollibaugh JT. Annual cycle of benthic nutrient fluxes in Tomales Bay, California, and contribution of the benthos to total ecosystem metabolism Marine Ecology Progress Series. 79: 115-125. DOI: 10.3354/Meps079115  0.52
1991 Hollibaugh JT, Buddemeier RW, Smith SV. Contributions of colloidal and high molecular weight dissolved material to alkalinity and nutrient concentrations in shallow marine and estuarine systems Marine Chemistry. 34: 1-27. DOI: 10.1016/0304-4203(91)90011-K  0.52
1991 Smith SV, Hollibaugh JT, Dollar SJ, Vink S. Tomales bay metabolism: CNP stoichiometry and ecosystem heterotrophy at the land-sea interface Estuarine, Coastal and Shelf Science. 33: 223-257. DOI: 10.1016/0272-7714(91)90055-G  0.52
1989 Smith SV, Hollibaugh JT, Dollar SJ, Vink S. Tomales Bay, California: a case for carbon-controlled nitrogen cycling Limnology & Oceanography. 34: 37-52. DOI: 10.4319/Lo.1989.34.1.0037  0.52
1988 Hollibaugh JT. Tomales Bay, California: a macrocosm for examining biogeochemical coupling at the Land-Sea Interface Eos. 69: 843-845. DOI: 10.1029/88Eo01101  0.52
1983 Hollibaugh JT, Azam F. Microbial degradation of dissolved proteins in seawater Limnology & Oceanography. 28: 1104-1116.  0.52
1980 Hollibaugh JT, Seibert DLR, Thomas WH. A comparison of the acute toxicities of tenheavy metals to phytoplankton from Saanich Inlet, B.C., Canada Estuarine and Coastal Marine Science. 10: 93-105. DOI: 10.1016/S0302-3524(80)80052-1  0.52
1980 Hollibaugh JT, Carruthers AB, Fuhrman JA, Azam F. Cycling of organic nitrogen in marine plankton communities studied in enclosed water columns Marine Biology. 59: 15-21. DOI: 10.1007/Bf00396978  0.52
1980 King KR, Hollibaugh JT, Azam F. Predator-prey interactions between the larvacean Oikopleura dioica and bacterioplankton in enclosed water columns Marine Biology. 56: 49-57. DOI: 10.1007/Bf00390593  0.52
1979 Hollibaugh JT. Metabolic adaptation in natural bacterial populations supplemented with selected amino acids Estuarine and Coastal Marine Science. 9: 215-230. DOI: 10.1016/0302-3524(79)90116-6  0.52
1978 Hollibaugh JT. Nitrogen regeneration during the degradation of several amino acids by plankton communities collected near Halifax, Nova Scotia, Canada Marine Biology. 45: 191-201. DOI: 10.1007/BF00390601  0.52
1976 Hollibaugh JT. The biological degradation of arginine and glutamic acid in seawater in relation to the growth of phytoplankton Marine Biology. 36: 303-312. DOI: 10.1007/BF00389191  0.52
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