Patricia Q Tran - Publications

Affiliations: 
2018-2023 Bacteriology University of Wisconsin, Madison, Madison, WI 

14 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Kosmopoulos JC, Klier KM, Langwig MV, Tran PQ, Anantharaman K. Viromes vs. mixed community metagenomes: choice of method dictates interpretation of viral community ecology. Biorxiv : the Preprint Server For Biology. PMID 37904928 DOI: 10.1101/2023.10.15.562385  0.688
2023 Salamzade R, Tran P, Martin C, Manson AL, Gilmore MS, Earl AM, Anantharaman K, Kalan LR. zol & fai: large-scale targeted detection and evolutionary investigation of gene clusters. Biorxiv : the Preprint Server For Biology. PMID 37333121 DOI: 10.1101/2023.06.07.544063  0.624
2023 Tran PQ, Bachand SC, Hotvedt JC, Kieft K, McDaniel EA, McMahon KD, Anantharaman K. Physiological and genomic evidence of cysteine degradation and aerobic hydrogen sulfide production in freshwater bacteria. Msystems. e0020123. PMID 37285121 DOI: 10.1128/msystems.00201-23  0.723
2023 Zhou Z, Tran PQ, Adams AM, Kieft K, Breier JA, Fortunato CS, Sheik CS, Huber JA, Li M, Dick GJ, Anantharaman K. Sulfur cycling connects microbiomes and biogeochemistry in deep-sea hydrothermal plumes. The Isme Journal. PMID 37179442 DOI: 10.1038/s41396-023-01421-0  0.673
2023 He S, Linz AM, Stevens SLR, Tran PQ, Moya-Flores F, Oyserman BO, Dwulit-Smith JR, Forest KT, McMahon KD. Diversity, distribution, and expression of opsin genes in freshwater lakes. Molecular Ecology. PMID 36799010 DOI: 10.1111/mec.16891  0.331
2022 Olmsted CN, Ort R, Tran PQ, McDaniel EA, Roden EE, Bond DR, He S, McMahon KD. Environmental predictors of electroactive bacterioplankton in small boreal lakes. Environmental Microbiology. PMID 36529539 DOI: 10.1111/1462-2920.16314  0.313
2022 Zhou Z, Tran PQ, Breister AM, Liu Y, Kieft K, Cowley ES, Karaoz U, Anantharaman K. METABOLIC: high-throughput profiling of microbial genomes for functional traits, metabolism, biogeochemistry, and community-scale functional networks. Microbiome. 10: 33. PMID 35172890 DOI: 10.1186/s40168-021-01213-8  0.711
2021 Tran PQ, Anantharaman K. Biogeochemistry Goes Viral: towards a Multifaceted Approach To Study Viruses and Biogeochemical Cycling. Msystems. 6: e0113821. PMID 34636672 DOI: 10.1128/mSystems.01138-21  0.637
2021 Tran PQ, Bachand SC, McIntyre PB, Kraemer BM, Vadeboncoeur Y, Kimirei IA, Tamatamah R, McMahon KD, Anantharaman K. Depth-discrete metagenomics reveals the roles of microbes in biogeochemical cycling in the tropical freshwater Lake Tanganyika. The Isme Journal. PMID 33564113 DOI: 10.1038/s41396-021-00898-x  0.726
2020 Peterson BD, McDaniel EA, Schmidt AG, Lepak RF, Janssen SE, Tran PQ, Marick RA, Ogorek JM, DeWild JF, Krabbenhoft DP, McMahon KD. Mercury Methylation Genes Identified across Diverse Anaerobic Microbial Guilds in a Eutrophic Sulfate-Enriched Lake. Environmental Science & Technology. PMID 33228362 DOI: 10.1021/acs.est.0c05435  0.435
2020 McDaniel EA, Peterson BD, Stevens SLR, Tran PQ, Anantharaman K, McMahon KD. Expanded Phylogenetic Diversity and Metabolic Flexibility of Mercury-Methylating Microorganisms. Msystems. 5. PMID 32817383 DOI: 10.1128/mSystems.00299-20  0.707
2020 Zhou Z, Tran PQ, Kieft K, Anantharaman K. Genome diversification in globally distributed novel marine Proteobacteria is linked to environmental adaptation. The Isme Journal. PMID 32393808 DOI: 10.1038/s41396-020-0669-4  0.716
2018 Colatriano D, Tran PQ, Guéguen C, Williams WJ, Lovejoy C, Walsh DA. Genomic evidence for the degradation of terrestrial organic matter by pelagic Arctic Ocean Chloroflexi bacteria. Communications Biology. 1: 90. PMID 30271971 DOI: 10.1038/s42003-018-0086-7  0.333
2018 Tran P, Ramachandran A, Khawasek O, Beisner BE, Rautio M, Huot Y, Walsh DA. Microbial life under ice: Metagenome diversity and in situ activity of Verrucomicrobia in seasonally ice-covered lakes. Environmental Microbiology. PMID 29921005 DOI: 10.1111/1462-2920.14283  0.306
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