Peter V. Kharchenko, Ph.D.
Affiliations: | 2005 | Harvard University, Cambridge, MA, United States |
Area:
Computational GeneticsGoogle:
"Peter Kharchenko"Mean distance: 9.43 | S | N | B | C | P |
Parents
Sign in to add mentorGeorge M. Church | grad student | 2005 | Harvard | |
(Local properties of metabolic networks.) |
Children
Sign in to add traineeJean Fan | grad student | Harvard Medical School | |
Teng Gao | grad student | Harvard Medical School (GenetiTree) | |
Jonathan Mitchel | grad student | ||
Ruslan Soldatov | post-doc | ||
Xin Wang | post-doc | 2020-2021 | Harvard Medical School (Computational Biology Tree) |
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Publications
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Gao T, Kastriti ME, Ljungström V, et al. (2023) A pan-tissue survey of mosaic chromosomal alterations in 948 individuals. Nature Genetics. 55: 1901-1911 |
Faure L, Soldatov R, Kharchenko PV, et al. (2022) scFates: a scalable python package for advanced pseudotime and bifurcation analysis from single cell data. Bioinformatics (Oxford, England) |
Gao T, Soldatov R, Sarkar H, et al. (2022) Haplotype-aware analysis of somatic copy number variations from single-cell transcriptomes. Nature Biotechnology |
Purroy Zuriguel N, Tong YE, Lemvigh CK, et al. (2022) Single cell analysis reveals immune dysfunction from the earliest stages of CLL that can be reversed by ibrutinib. Blood |
Petukhov V, Xu RJ, Soldatov RA, et al. (2021) Cell segmentation in imaging-based spatial transcriptomics. Nature Biotechnology |
Bakken TE, Jorstad NL, Hu Q, et al. (2021) Comparative cellular analysis of motor cortex in human, marmoset and mouse. Nature. 598: 111-119 |
Girskis KM, Stergachis AB, DeGennaro EM, et al. (2021) Rewiring of human neurodevelopmental gene regulatory programs by human accelerated regions. Neuron |
Bergen V, Soldatov RA, Kharchenko PV, et al. (2021) RNA velocity-current challenges and future perspectives. Molecular Systems Biology. 17: e10282 |
Seplyarskiy VB, Soldatov RA, Koch E, et al. (2021) Population sequencing data reveal a compendium of mutational processes in the human germ line. Science (New York, N.Y.) |
Krivanek J, Soldatov RA, Kastriti ME, et al. (2020) Dental cell type atlas reveals stem and differentiated cell types in mouse and human teeth. Nature Communications. 11: 4816 |