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| Duque AF, Morin S, Wolf G, et al. (2022) Geometry Regularized Autoencoders. Ieee Transactions On Pattern Analysis and Machine Intelligence |
| Stanley JS, Gigante S, Wolf G, et al. (2021) Harmonic Alignment. Proceedings of the ... Siam International Conference On Data Mining. Siam International Conference On Data Mining. 2020: 316-324 |
| Chen WS, Zivanovic N, van Dijk D, et al. (2020) Uncovering axes of variation among single-cell cancer specimens. Nature Methods |
| Moon KR, van Dijk D, Wang Z, et al. (2020) Author Correction: Visualizing structure and transitions in high-dimensional biological data. Nature Biotechnology |
| Moon KR, van Dijk D, Wang Z, et al. (2019) Visualizing structure and transitions in high-dimensional biological data. Nature Biotechnology. 37: 1482-1492 |
| Amodio M, van Dijk D, Srinivasan K, et al. (2019) Exploring single-cell data with deep multitasking neural networks. Nature Methods |
| van Dijk D, Sharma R, Nainys J, et al. (2018) Recovering Gene Interactions from Single-Cell Data Using Data Diffusion. Cell |
| Amodio M, Srinivasan K, Dijk Dv, et al. (2018) Abstract 5306: SAUCIE: Sparse autoencoder for unsupervised clustering, imputation, and embedding Cancer Research. 78: 5306-5306 |
| Moon KR, Stanley JS, Burkhardt D, et al. (2018) Manifold learning-based methods for analyzing single-cell RNA-sequencing data Current Opinion in Systems Biology. 7: 36-46 |
| Bermanis A, Salhov M, Wolf G, et al. (2016) Measure-based diffusion grid construction and high-dimensional data discretization Applied and Computational Harmonic Analysis. 40: 207-228 |