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Jarad B. Niemi, Ph.D.

Affiliations: 
2009 Statistical Science Duke University, Durham, NC 
Area:
Bioinformatics, Statistics
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Mike West grad student 2009 Duke
 (Bayesian analysis and computational methods for dynamic modeling.)

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Publications

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Alvarez-Castro I, Niemi J. (2019) Fully Bayesian analysis of allele-specific RNA-seq data. Mathematical Biosciences and Engineering : Mbe. 16: 7751-7770
Landau W, Niemi J, Nettleton D. (2019) Fully Bayesian analysis of RNA-seq counts for the detection of gene expression heterosis. Journal of the American Statistical Association. 114: 610-621
Garton N, Niemi J. (2019) Multivariate temporal modeling of crime with dynamic linear models. Plos One. 14: e0218375
Martin-Schwarze A, Niemi J, Dixon P. (2017) Assessing the Impacts of Time-to-Detection Distribution Assumptions on Detection Probability Estimation Journal of Agricultural Biological and Environmental Statistics. 22: 465-480
Michaud NL, Niemi J. (2016) A Bayesian Hierarchical Model for Estimating Influenza Epidemic Severity Online Journal of Public Health Informatics. 8
Eidsvik J, Shaby BA, Reich BJ, et al. (2014) Estimation and prediction in spatial models with block composite likelihoods Journal of Computational and Graphical Statistics. 23: 295-315
Daigle BJ, Roh MK, Petzold LR, et al. (2012) Accelerated maximum likelihood parameter estimation for stochastic biochemical systems. Bmc Bioinformatics. 13: 68
Niemi J, West M. (2010) Adaptive Mixture Modelling Metropolis Methods for Bayesian Analysis of Non-linear State-Space Models. Journal of Computational and Graphical Statistics : a Joint Publication of American Statistical Association, Institute of Mathematical Statistics, Interface Foundation of North America. 19: 260-280
Wang Q, Niemi J, Tan CM, et al. (2010) Image segmentation and dynamic lineage analysis in single-cell fluorescence microscopy. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 77: 101-10
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