Thomas D. Tullius, Ph.D.

1982-1997 Chemistry Johns Hopkins University, Baltimore, MD 
 1997- Chemistry Boston University, Boston, MA, United States 
General Biophysics, Molecular Biology, Biostatistics Biology
"Thomas Tullius"


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Keith Owen Hodgson grad student 1973-1979 (Chemistry Tree)
Stephen James Lippard post-doc 1979-1982 (Chemistry Tree)


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Mair E. A. Churchill grad student 1988 Johns Hopkins (Physics Tree)
Bo Pang grad student 2004 Boston University
Truc T. Diep grad student 2006 Boston University
Jason A. Greenbaum grad student 2006 Boston University
Shakti S. Ingle grad student 2013 Boston University
Robert N. Azad grad student 2014 Boston University
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Chiu TP, Yang L, Zhou T, et al. (2015) GBshape: a genome browser database for DNA shape annotations. Nucleic Acids Research. 43: D103-9
Bishop EP, Rohs R, Parker SC, et al. (2011) A map of minor groove shape and electrostatic potential from hydroxyl radical cleavage patterns of DNA. Acs Chemical Biology. 6: 1314-20
Parker SC, Harlap A, Tullius TD. (2011) A computational method to search for DNA structural motifs in functional genomic elements. Methods in Molecular Biology (Clifton, N.J.). 759: 367-79
Parker SC, Tullius TD. (2011) DNA shape, genetic codes, and evolution. Current Opinion in Structural Biology. 21: 342-7
Parker SC, Hansen L, Abaan HO, et al. (2009) Local DNA topography correlates with functional noncoding regions of the human genome. Science (New York, N.Y.). 324: 389-92
Parker SC, Margulies EH, Tullius TD. (2008) The relationship between fine scale DNA structure, GC content, and functional elements in 1% of the human genome. Genome Informatics. International Conference On Genome Informatics. 20: 199-211
Jain SS, Tullius TD. (2008) Footprinting protein-DNA complexes using the hydroxyl radical. Nature Protocols. 3: 1092-1100
Wang Q, Tullius TD, Levin JR. (2007) Effects of discontinuities in the DNA template on abortive initiation and promoter escape by Escherichia coli RNA polymerase. The Journal of Biological Chemistry. 282: 26917-27
Birney E, Stamatoyannopoulos JA, et al. (2007) Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. Nature. 447: 799-816
Greenbaum JA, Pang B, Tullius TD. (2007) Construction of a genome-scale structural map at single-nucleotide resolution. Genome Research. 17: 947-53
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