Benilton d. Carvalho, Ph.D.

Affiliations: 
2009 Johns Hopkins University, Baltimore, MD 
Area:
Biostatistics Biology
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"Benilton Carvalho"

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Rafael A. Irizarry grad student 2009 Johns Hopkins
 (Statistical methods and software for high density oligonucleotide arrays.)
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Publications

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Wajnberg G, Carvalho BS, Ferreira CG, et al. (2015) Combined Analysis of SNP Array Data Identifies Novel CNV Candidates and Pathways in Ependymoma and Mesothelioma. Biomed Research International. 2015: 902419
Huber W, Carey VJ, Gentleman R, et al. (2015) Orchestrating high-throughput genomic analysis with Bioconductor. Nature Methods. 12: 115-21
Opdahl A, Ambale Venkatesh B, Fernandes VR, et al. (2014) Reply: Resting heart rate: an independent predictor of congestive heart failure. Journal of the American College of Cardiology. 64: 422
Weaver JM, Ross-Innes CS, Shannon N, et al. (2014) Ordering of mutations in preinvasive disease stages of esophageal carcinogenesis. Nature Genetics. 46: 837-43
Opdahl A, Ambale Venkatesh B, Fernandes VR, et al. (2014) Resting heart rate as predictor for left ventricular dysfunction and heart failure: MESA (Multi-Ethnic Study of Atherosclerosis). Journal of the American College of Cardiology. 63: 1182-9
Carvalho BS, Rustici G. (2013) The challenges of delivering bioinformatics training in the analysis of high-throughput data. Briefings in Bioinformatics. 14: 538-47
Scharpf RB, Irizarry RA, Ritchie ME, et al. (2011) Using the R Package crlmm for Genotyping and Copy Number Estimation. Journal of Statistical Software. 40: 1-32
Yegnasubramanian S, Wu Z, Haffner MC, et al. (2011) Chromosome-wide mapping of DNA methylation patterns in normal and malignant prostate cells reveals pervasive methylation of gene-associated and conserved intergenic sequences. Bmc Genomics. 12: 313
Halper-Stromberg E, Frelin L, Ruczinski I, et al. (2011) Performance assessment of copy number microarray platforms using a spike-in experiment. Bioinformatics (Oxford, England). 27: 1052-60
Ritchie ME, Liu R, Carvalho BS, et al. (2011) Comparing genotyping algorithms for Illumina's Infinium whole-genome SNP BeadChips Bmc Bioinformatics. 12
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