Matthew N. McCall, Ph.D.

Affiliations: 
2010 Johns Hopkins University, Baltimore, MD 
Area:
Biostatistics Biology, Bioinformatics Biology, Statistics
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"Matthew McCall"

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Rafael A. Irizarry grad student 2010 Johns Hopkins
 (Preprocessing and barcoding of data from a single microarray.)
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Publications

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Xie QY, Almudevar A, Whitney-Miller CL, et al. (2016) A microRNA biomarker of hepatocellular carcinoma recurrence following liver transplantation accounting for within-patient heterogeneity. Bmc Medical Genomics. 9: 18
McCall MN, Baras AS, Crits-Christoph A, et al. (2016) A benchmark for microRNA quantification algorithms using the OpenArray platform. Bmc Bioinformatics. 17: 138
Kent OA, McCall MN, Cornish TC, et al. (2014) Lessons from miR-143/145: the importance of cell-type localization of miRNAs. Nucleic Acids Research. 42: 7528-38
McCall MN, McMurray HR, Land H, et al. (2014) On non-detects in qPCR data. Bioinformatics (Oxford, England). 30: 2310-6
Haider BA, Baras AS, McCall MN, et al. (2014) A critical evaluation of microRNA biomarkers in non-neoplastic disease. Plos One. 9: e89565
McCall MN, Jaffee HA, Zelisko SJ, et al. (2014) The Gene Expression Barcode 3.0: improved data processing and mining tools. Nucleic Acids Research. 42: D938-43
Tran V, McCall MN, McMurray HR, et al. (2013) On the underlying assumptions of threshold Boolean networks as a model for genetic regulatory network behavior. Frontiers in Genetics. 4: 263
Wu G, Yustein JT, McCall MN, et al. (2013) ChIP-PED enhances the analysis of ChIP-seq and ChIP-chip data. Bioinformatics (Oxford, England). 29: 1182-1189
McCall MN, Jaffee HA, Irizarry RA. (2012) fRMA ST: frozen robust multiarray analysis for Affymetrix Exon and Gene ST arrays. Bioinformatics (Oxford, England). 28: 3153-4
McCall MN, Almudevar A. (2012) Affymetrix GeneChip microarray preprocessing for multivariate analyses. Briefings in Bioinformatics. 13: 536-46
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