Deepayan Sarkar, Ph.D.

Affiliations: 
2006 University of Wisconsin, Madison, Madison, WI 
Area:
Statistics, Genetics
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"Deepayan Sarkar"

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Michael Newton grad student 2006 UW Madison
 (On the analysis of optical mapping data.)
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Publications

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Dey A, Sarkar D. (2016) A Note on the Construction of Orthogonal Latin Hypercube Designs Journal of Combinatorial Designs. 24: 105-111
Gupta A, Place M, Goldstein S, et al. (2015) Single-molecule analysis reveals widespread structural variation in multiple myeloma. Proceedings of the National Academy of Sciences of the United States of America. 112: 7689-94
Sarkar D. (2014) R graphics Handbook of Statistics. 32: 49-91
Sarkar D. (2014) Editorial R Journal. 6: 3
Ray M, Goldstein S, Zhou S, et al. (2013) Discovery of structural alterations in solid tumor oligodendroglioma by single molecule analysis. Bmc Genomics. 14: 505
Sarkar D, Goldstein S, Schwartz DC, et al. (2012) Statistical significance of optical map alignments. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 19: 478-92
Knouf EC, Garg K, Arroyo JD, et al. (2012) An integrative genomic approach identifies p73 and p63 as activators of miR-200 microRNA family transcription. Nucleic Acids Research. 40: 499-510
Teague B, Waterman MS, Goldstein S, et al. (2010) High-resolution human genome structure by single-molecule analysis. Proceedings of the National Academy of Sciences of the United States of America. 107: 10848-53
Cao Y, Yao Z, Sarkar D, et al. (2010) Genome-wide MyoD binding in skeletal muscle cells: a potential for broad cellular reprogramming. Developmental Cell. 18: 662-74
Hahne F, LeMeur N, Brinkman RR, et al. (2009) flowCore: a Bioconductor package for high throughput flow cytometry. Bmc Bioinformatics. 10: 106
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