Ching-Yun Chang, Ph.D.

Affiliations: 
2013 Statistics Purdue University, West Lafayette, IN, United States 
Area:
Statistics, Biostatistics Biology
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"Ching-Yun Chang"

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Olga Vitek grad student 2013 Purdue
 (Cost-effective and accurate protein quantification for large-scale targeted proteomics.)
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Publications

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Huttenhain R, Choi M, Martin de la Fuente L, et al. (2019) A targeted mass spectrometry strategy for developing proteomic biomarkers: a case study of epithelial ovarian cancer. Molecular & Cellular Proteomics : McP
Surinova S, Choi M, Tao S, et al. (2015) Prediction of colorectal cancer diagnosis based on circulating plasma proteins. Embo Molecular Medicine
Selevsek N, Chang CY, Gillet LC, et al. (2015) Reproducible and consistent quantification of the Saccharomyces cerevisiae proteome by SWATH-mass spectrometry. Molecular & Cellular Proteomics : McP. 14: 739-49
Cheng L, Liu Y, Chang C, et al. (2015) Statistical elimination of spectral features with large between-run variation enhances quantitative protein-level conclusions in experiments with data-independent spectral acquisition Bmc Bioinformatics. 16
Choi M, Chang CY, Clough T, et al. (2014) MSstats: an R package for statistical analysis of quantitative mass spectrometry-based proteomic experiments. Bioinformatics (Oxford, England). 30: 2524-6
Chang CY, Sabidó E, Aebersold R, et al. (2014) Targeted protein quantification using sparse reference labeling. Nature Methods. 11: 301-4
Thaminy S, Blaser H, Clough T, et al. (2014) Integrated-omics analysis uncovers a fundamental hypoxia-driven mechanism of breast cancer progression F1000research. 5
Surinova S, Hüttenhain R, Chang CY, et al. (2013) Automated selected reaction monitoring data analysis workflow for large-scale targeted proteomic studies. Nature Protocols. 8: 1602-19
Sabidó E, Wu Y, Bautista L, et al. (2013) Targeted proteomics reveals strain-specific changes in the mouse insulin and central metabolic pathways after a sustained high-fat diet. Molecular Systems Biology. 9: 681
Muhlemann JK, Maeda H, Chang CY, et al. (2012) Developmental changes in the metabolic network of snapdragon flowers. Plos One. 7: e40381
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