Pall Melsted, Ph.D.

Affiliations: 
2009 Carnegie Mellon University, Pittsburgh, PA 
Area:
Mathematics, Computer Science
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"Pall Melsted"

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Alan Frieze grad student 2009 Carnegie Mellon
 (Algorithms on random graphs.)
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Publications

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Ondov BD, Treangen TJ, Melsted P, et al. (2016) Mash: fast genome and metagenome distance estimation using MinHash. Genome Biology. 17: 132
Bray NL, Pimentel H, Melsted P, et al. (2016) Near-optimal probabilistic RNA-seq quantification. Nature Biotechnology
Kozma R, Melsted P, Magnússon KP, et al. (2015) Looking into the past - the reaction of three grouse species to climate change over the last million years using whole genome sequences. Molecular Ecology
Óskarsdóttir A, Másson G, Melsted P. (2015) BamHash: a checksum program for verifying the integrity of sequence data. Bioinformatics (Oxford, England)
Kehr B, Melsted P, Halldórsson BV. (2015) PopIns: population-scale detection of novel sequence insertions. Bioinformatics (Oxford, England)
Melsted P, Halldórsson BV. (2014) KmerStream: streaming algorithms for k-mer abundance estimation. Bioinformatics (Oxford, England). 30: 3541-7
Perry GH, Melsted P, Marioni JC, et al. (2012) Comparative RNA sequencing reveals substantial genetic variation in endangered primates. Genome Research. 22: 602-10
Perry GH, Reeves D, Melsted P, et al. (2012) A genome sequence resource for the aye-aye (Daubentonia madagascariensis), a nocturnal lemur from Madagascar. Genome Biology and Evolution. 4: 126-35
Frieze A, Melsted P. (2012) Maximum matchings in random bipartite graphs and the space utilization of Cuckoo Hash tables Random Structures and Algorithms. 41: 334-364
Melsted P, Pritchard JK. (2011) Efficient counting of k-mers in DNA sequences using a bloom filter. Bmc Bioinformatics. 12: 333
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